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<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A3</accession>
    <name>A0A2M9P4A3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004786">
        <property type="protein sequence ID" value="PJN92355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="29" mass="3262" checksum="D69C1564070512A0" modified="2018-04-25" version="1" fragment="single">MNEYVEDGLVERLAAAEEAVINPLRMRAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B7</accession>
    <name>A0A2M9P4B7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004712">
        <property type="protein sequence ID" value="PJN92382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7865" checksum="E700AB89B86ECFE8" modified="2018-04-25" version="1" fragment="single">GRGVFKPGVFEPGVFVDYEQQPDEPTARREMLDRLERLEQMIAPLVAQVGISATTDHLDRSKILRSPSVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F4</accession>
    <name>A0A2M9P4F4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004590">
        <property type="protein sequence ID" value="PJN92422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="56"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8093" checksum="CDA8FB47F31B1866" modified="2018-04-25" version="1" fragment="single">RWRRFDTAALAVATDGVNRLFSNDNPLLRLGRDLGLGLMDRAGGGSTRRRWRWRRTASTGSSPTTTRCSGWGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K7</accession>
    <name>A0A2M9P4K7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004493">
        <property type="protein sequence ID" value="PJN92448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8091" checksum="AE2CA28194652931" modified="2018-04-25" version="1" fragment="single">THRGQNGKSFCEHWVIEDAGHAWAGGHPSGSYTDPAGRSYVTTTHRGQNGKSFCEHWVIEDAGHAWAGGHPSGSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P9</accession>
    <name>A0A2M9P4P9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004261">
        <property type="protein sequence ID" value="PJN92517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8390" checksum="2FAF001B851257DA" modified="2018-04-25" version="1" fragment="single">MTYSSYTCEQLKSEAIRIDEALSRASAQQNDARQSDTVGVILLGLPVSSLSGGNVADQIAYLKGHKDTIQQTQITSNC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q2</accession>
    <name>A0A2M9P4Q2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004364">
        <property type="protein sequence ID" value="PJN92488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9435" checksum="56E003496C4B392D" modified="2018-04-25" version="1" fragment="single">HVVITNVQQLATDLDKWLNQFSDNFFDMIIIDEAHHSAAASWQRVIERFNQAKVILLTATPFRSDRQELDGELVFRYPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q8</accession>
    <name>A0A2M9P4Q8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alkane 1-monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004288">
        <property type="protein sequence ID" value="PJN92510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4634" checksum="B78685FB31769089" modified="2018-04-25" version="1" fragment="single">MEQAAEVYRETFQPSEHLARPHFMLALNVFAAETDAEARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P512</accession>
    <name>A0A2M9P512_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Restriction endonuclease subunit M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27895</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003879">
        <property type="protein sequence ID" value="PJN92644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="9466" checksum="EDAB636D69809388" modified="2018-04-25" version="1" fragment="single">MCGKVRLVYIDPPFATQTVFHSRKLAHAYEDVFECYEYLEFMRERLIFLHKIMADDGSIYVISTPRWCFMSRLSWMKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P582</accession>
    <name>A0A2M9P582_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27485</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003750">
        <property type="protein sequence ID" value="PJN92689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10805" checksum="73C6059E103F6E2A" modified="2018-04-25" version="1" fragment="single">GEVCPLWPGHPTSAHWGIEDPAAVEGPEFRKRAAFDDALTYMRNRISAFINLPIASIDRLALKAKLQAIARWTAPPLRNRKSRSMSVFERYLTVW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P596</accession>
    <name>A0A2M9P596_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sec-independent protein translocase TatA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003698">
        <property type="protein sequence ID" value="PJN92712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="27" mass="2858" checksum="B9A46A046B8B5B92" modified="2018-04-25" version="1" fragment="single">GLNDGKAEIENASAESARDITPEKDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A7</accession>
    <name>A0A2M9P5A7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003712">
        <property type="protein sequence ID" value="PJN92703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="11344" checksum="1C6F4BECE8EA3AE0" modified="2018-04-25" version="1" fragment="single">VRFGFYENAVSLLKLFLFMALFASWDFQMFFIFYSDRFPLNYLFAAFIAFMTALAISTSSLLTMAIQIFLMLYAFVFRRLTYKWPIFLFAMLIATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C5</accession>
    <name>A0A2M9P5C5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003634">
        <property type="protein sequence ID" value="PJN92737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8901" checksum="C5CBADE41A39EE27" modified="2018-04-25" version="1" fragment="single">DGVVIRDNTVAYDSNQIVNQIPLIDVSPSSRNVDIGENTVYGVDAGHENATVFLVATRPSCRPRSETSGAGIRSCSRREPTPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R1</accession>
    <name>A0A2M9P5R1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003150">
        <property type="protein sequence ID" value="PJN92894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="7164" checksum="B3DADFAB31B0AF3F" modified="2018-04-25" version="1" fragment="single">MAPFSAVRRRRLGRPRTTDLREVMNAILYIATTGCQWVQLPKDLPPYSTVQRYFYDWRDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y8</accession>
    <name>A0A2M9P5Y8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003050">
        <property type="protein sequence ID" value="PJN92939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7489" checksum="531CB08A471A3DD8" modified="2018-04-25" version="1" fragment="single">MTLSVKIWMASLCRASGYCGLFVPDVVVLDDEFFTPPMNRASWFILRMTLFSTVMSELFQRFIAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P616</accession>
    <name>A0A2M9P616_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002895">
        <property type="protein sequence ID" value="PJN93001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="13"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14206" checksum="8B4F3F91E3EE3CBF" modified="2018-04-25" version="1" fragment="single">RRFTRERLVAFLAGQPACVVAMEACCGAHYLGRVFAAQGHEVRLMSPEYVQPYVKAQKNDDRDAEAIAEAATRPTMRFVALKSAAQLDQQTLHRMRSRLVNGRTRLINQLRAILLERGITVAKGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P633</accession>
    <name>A0A2M9P633_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002879">
        <property type="protein sequence ID" value="PJN93006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10257" checksum="6513B95AB4813952" modified="2018-04-25" version="1" fragment="single">MADRNLELRRIFSGDEATVQQKQMDWVRAKLRYESGAVIGDDEARQEAATYFPRPGDRPERVKAKEESRKQAIEQMRLAAGRAAPGGVGAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P646</accession>
    <name>A0A2M9P646_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002886">
        <property type="protein sequence ID" value="PJN93003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14492" checksum="B15CF88EFDA1EA45" modified="2018-04-25" version="1" fragment="single">NVYLIDDFTASGTTFIRQVDGVWKGKLKKFNDLIVKARESLQEEFPVSDSYALHIHHYVSTEQARAALEERVADAKANLENRSFHEVTITEGLRLPASLKMVNGTDTAMLDLCERYYDDHLYQRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M4</accession>
    <name>A0A2M9P6M4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002461">
        <property type="protein sequence ID" value="PJN93155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="96"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14655" checksum="55E442D88F91FCF6" modified="2018-04-25" version="1" fragment="single">GPGGQKSARAQSLRQHPFAVQPQREWEEARKRLNEEAKRLATVVLNHVDLTVAGTELIYKYRSLKLSGRSNFIAALTMVNHEINKRLGKDRQAASIEEFRSVLDNLEDLVQTLARRVRKAKADYGQENS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T1</accession>
    <name>A0A2M9P6T1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_22560</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002318">
        <property type="protein sequence ID" value="PJN93229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9181" checksum="AF29C5187299BEF5" modified="2018-04-25" version="1" fragment="single">AFSPEIRRVIYTTNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W5</accession>
    <name>A0A2M9P6W5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002165">
        <property type="protein sequence ID" value="PJN93291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01183">
        <property type="entry name" value="RIBORDTASEM1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="RIBORED_LARGE" evidence="2">
        <location>
            <begin position="41"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17804" checksum="DF184E639E900828" modified="2018-04-25" version="1" fragment="single">AIWISPFFRSPMADFGYDVQNYRDVDPMFGTIGNFDALVRRAHELWRTIMRNTYEAAEPGVLFLDRINAENNLHYCERIEATNPCGEIPIPDHGCCCLGSINLARFVVDGFEAGATLDREGLVETVTVAVRMLDNVLTATVWPLPEQAAEAASKRRVGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X4</accession>
    <name>A0A2M9P6X4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Inorganic triphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002163">
        <property type="protein sequence ID" value="PJN93292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050355">
        <property type="term" value="F:triphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.40.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007899">
        <property type="entry name" value="CHAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038186">
        <property type="entry name" value="CHAD_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033469">
        <property type="entry name" value="CYTH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039013">
        <property type="entry name" value="YgiF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39569">
        <property type="entry name" value="PTHR39569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05235">
        <property type="entry name" value="CHAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55154">
        <property type="entry name" value="SSF55154"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CHAD" evidence="1">
        <location>
            <begin position="104"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="16991" checksum="BD788689E8392D7D" modified="2018-04-25" version="1" fragment="single">HRLRLPGGLVELALDQGEVVAGEASAPILEVEMELVEGGIDAIFDLARRLFPQGPVNFATANKSTLGYRLARGEEVQPALKPRKAGSLSYPAEATVETVARDVFRDCFGQIATNLLVVAGNESSEGPHQLRIGLRRLRTAFAVFGESLGKDGLAPLSAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P707</accession>
    <name>A0A2M9P707_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002106">
        <property type="protein sequence ID" value="PJN93322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7654" checksum="CBC2D3A6A71FD824" modified="2018-04-25" version="1" fragment="single">MDKRTSRYIEQWKLSDLQPLTRTFTSDLYKAQSKQGAVVLKVLTDAGAKDEKAAADVLELWGGRGAVQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P790</accession>
    <name>A0A2M9P790_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Segregation/condensation protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001962">
        <property type="protein sequence ID" value="PJN93402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003768">
        <property type="entry name" value="ScpA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33969">
        <property type="entry name" value="PTHR33969"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02616">
        <property type="entry name" value="SMC_ScpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0159">Chromosome partition</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14081" checksum="D87A19D9751D3634" modified="2018-04-25" version="1" fragment="single">MPEDFFDVSATADRLAAEALVVELGGYEGPLDLLLTLGRAQKVDLRRLSILRLAEQYLAFVEAAKRLRIELAADYLVMAAWLAYLKSRLLLPPDPTEEGPSGEELAAHLAFQLERLEAMRAVAARLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H7</accession>
    <name>A0A2M9P7H7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">30S ribosomal protein S12</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rpsL</name>
        <name evidence="3" type="ORF">CNY89_20590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001857">
        <property type="protein sequence ID" value="PJN93469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006032">
        <property type="entry name" value="Ribosomal_S12/S23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00164">
        <property type="entry name" value="Ribosom_S12_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01034">
        <property type="entry name" value="RIBOSOMALS12"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="5245" checksum="06E8D1D2C11D11EF" modified="2018-04-25" version="1" fragment="single">MPTIQQLIRKPRQPRVVRSKSMHLQACPQKRGVCTRVYTTTPKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N2</accession>
    <name>A0A2M9P7N2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001771">
        <property type="protein sequence ID" value="PJN93529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025528">
        <property type="entry name" value="BrnA_antitoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14384">
        <property type="entry name" value="BrnA_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="16374" checksum="24998D8F0EB4FC13" modified="2018-04-25" version="1">MRVNRPGAGWGHSETGQETAPVEDRLRTIAQERAHLEMMIELERQEQDWRDIQLRRSLIPADWGKLERTAPVRPRRKKVTVALDEDVARWFRGLGAGYHGRINAVLRTYMLALISKAVLSQGDKNRHGDETWGKAPPKRKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N8</accession>
    <name>A0A2M9P7N8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001747">
        <property type="protein sequence ID" value="PJN93543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11955" checksum="B560AFFCCF030943" modified="2018-04-25" version="1">MTEIPHKEATRRSAEALHAILSLADHIAAQANSADPEVGNRLCLLAQNICDQVETISKSLSRMDPRVARILEEVAREKEAEARRKDYRRDLLLPNSPAEPDWNPPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P7</accession>
    <name>A0A2M9P7P7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Galactonate dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19960</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UxaA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001733">
        <property type="protein sequence ID" value="PJN93553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007392">
        <property type="entry name" value="Gal/Altron_deHydtase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04295">
        <property type="entry name" value="GD_AH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GD_AH_C" evidence="3">
        <location>
            <begin position="2"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6318" checksum="090C2591F849D3D6" modified="2018-04-25" version="1" fragment="single">EGDMDINAGDVIDRGVTLAAKGREIFETFIEVASGRETKSEELGFGGAEFVPWQIGAVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S3</accession>
    <name>A0A2M9P7S3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Tryptophan--tRNA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_19705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001676">
        <property type="protein sequence ID" value="PJN93592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004812">
        <property type="term" value="F:aminoacyl-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006418">
        <property type="term" value="P:tRNA aminoacylation for protein translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="174" mass="18650" checksum="BBA9CD38F37590A9" modified="2018-04-25" version="1" fragment="single">KFNHDYGVDFFPITEPVIEGVATRVMSLRDGTKKMSKSDPSDLSRINLTDDADAIAAKIRKARTDPEPLPETLAELAGRAEAKNLVNIYAALSDETAEAVVARFAGKPFSEFKPALADLAVAELAPITARMTDLLSDPAEIDRQLTRGADKAAAISEPIVAQARAIMGMVGGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T6</accession>
    <name>A0A2M9P7T6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001664">
        <property type="protein sequence ID" value="PJN93602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025528">
        <property type="entry name" value="BrnA_antitoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14384">
        <property type="entry name" value="BrnA_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10408" checksum="B599A6999876FA0D" modified="2018-04-25" version="1">MSEGAITRISLDEALKAKGQGKTDWKRLALEEEAGEDEGFDWATAEPVLPQPRKAVSLRLDPEVLEFFRQGGKGYQTRINAVLRSYVAAKRTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V4</accession>
    <name>A0A2M9P7V4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Lipid kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_19530</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001637">
        <property type="protein sequence ID" value="PJN93617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="109"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="16069" checksum="92367384D6D7F54E" modified="2018-04-25" version="1" fragment="single">LFIVLGLGEAAKITLIVIGVTPIMVRDLALKTQEIPREMIVKAETLSASSWLIALRVVLPQVLPRLLTCLRLQLGPAFLFLIAAEAISADSGLGYRIFLVRRYLAMDVIFPYVAWITLIAVLADLGLDRLRRLVFPWSELERGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z8</accession>
    <name>A0A2M9P7Z8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">F0F1 ATP synthase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19150</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001568">
        <property type="protein sequence ID" value="PJN93676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024034">
        <property type="entry name" value="ATPase_F1/V1_b/a_C"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5578" checksum="16B119B0D7A8918D" modified="2018-04-25" version="1" fragment="single">GSPGVQVPIEVTIDSFKRVVAGEFDHLPESAFYMVGGIDEVIAKAEKMAAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P803</accession>
    <name>A0A2M9P803_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001623">
        <property type="protein sequence ID" value="PJN93630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9413" checksum="C30C3423CE60D918" modified="2018-04-25" version="1" fragment="single">KKNDLATAVQEAQALPTEARAAMGDWLAQAKLLSRVEAALKKNDLATAVQEAQALPTEARAAMGDWLAQAKLRADAEAGLADLSAAPNMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P809</accession>
    <name>A0A2M9P809_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001582">
        <property type="protein sequence ID" value="PJN93665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13575" checksum="5E93B7518402854C" modified="2018-04-25" version="1" fragment="single">AQRLDLMLRARGTAGVGIVFAASEEMPSHLGPNVVMPLLSHLASADEEMLFARDGIELAYRDGLSLARGGVSPRVVRTGKQSGTLFIPGREPLHLAGNDQLTIFERWWSQPRKAVPTSGKGADGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P834</accession>
    <name>A0A2M9P834_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001542">
        <property type="protein sequence ID" value="PJN93702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="23983" checksum="45823E4E25767358" modified="2018-04-25" version="1" fragment="single">MDRLLFGDNQFFGINHMSEEKARAQAMKFQDLSEIIAVLDAAYDEGIRTFMCTTHDRVALVCDHVRANPSRYEGFKFYPCMPYAHKYANAVTDYGMMGAVGHFMPDEGLLKTAIKGGMSLARKDIEGLATILIDMEMKMFRGLETPVIFLQNVVVDLLLGMGMKDSFRIFHDYVREKYDAEPGFITMNLPMLLDTLDEVGIQNPIVCANINK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P848</accession>
    <name>A0A2M9P848_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001522">
        <property type="protein sequence ID" value="PJN93717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="148"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="19990" checksum="5331972C29E15D83" modified="2018-04-25" version="1" fragment="single">MRKSALPPLGTPAVSKPGQWVQTERKAHEAWANLISRKPRAAEALHHLVAHMGNQNAVVMPQKVLAALMGKSLDTAQRAIRDLAAERWIQVVRIGKGKESAYVINDQVAWGQAREQLRLSAFSATIIADADDQDGLTLDQAPLRKLPTLYPSERQLPSGDGLPPPSQPFLDRMEPDLPSAKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P876</accession>
    <name>A0A2M9P876_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_18940</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001531">
        <property type="protein sequence ID" value="PJN93710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="7"/>
            <end position="14"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="234" mass="25121" checksum="9722D5331CECF866" modified="2018-04-25" version="1" fragment="single">EFVVFVGPSGCGKSTLLRSIAGLERVTSGAIEIDGKDVTRVSAADRGLAMVFQSYALYPHMSVRQNLAFGLENSGAPKAEIAAKIAEAARMLDIERFLDRKPGQLSGGQRQRVAIGRAIVRRPVAFLLDEPLSNLDAELRGSTRAELAALHARLGATMVYVTHDQVEAMTLANRIVVLRAGRIEQVGTPLELYTTGMCVTSVQTRNGGGRIRGRVLRSARSSTRNGSTSCSRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z2</accession>
    <name>A0A2M9P8Z2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17070</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the site-specific recombinase resolvase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001276">
        <property type="protein sequence ID" value="PJN94004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006118">
        <property type="entry name" value="Recombinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006120">
        <property type="entry name" value="Resolvase_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02796">
        <property type="entry name" value="HTH_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00398">
        <property type="entry name" value="RECOMBINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0229">DNA integration</keyword>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="5">
        <location>
            <begin position="1"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15824" checksum="B66E6F596559F3F5" modified="2018-04-25" version="1">MKACLAFLAPGDTLVVWKLDRLGRSLPHLLEIVAELKAQGVAFRSLTEAMDTDTPQGELLFSIFGALAQYERALTRERVLAGLAAARRRGRRGGRPPSLTPEQIEQITAALDVGTSKAAVCRTFKVPRSTLLDTLARVGWTPAGKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P900</accession>
    <name>A0A2M9P900_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001267">
        <property type="protein sequence ID" value="PJN94013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7951" checksum="5E3BDAE4CA6CF54E" modified="2018-04-25" version="1" fragment="single">VPDSMYRAVQLLGLNFEAPDQWIEARGGIPLLLGIGRWLAALATFTIVVELVSRSVGAWLRLRAQSCFPRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P955</accession>
    <name>A0A2M9P955_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001223">
        <property type="protein sequence ID" value="PJN94074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8184" checksum="2992DD69C2F790BC" modified="2018-04-25" version="1">MGTGAPVGNLDGLRPDGAGGWFSTDWIAGGVFHYDAEGEARQILELPPGSADLEFVAEKGVILIPMMLSGEVIARKID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B7</accession>
    <name>A0A2M9P9B7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001177">
        <property type="protein sequence ID" value="PJN94136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9280" checksum="4270400EBE27879B" modified="2018-04-25" version="1">MDAVTDFSVLRDTLLLENAFFLGLTEGALAAGAFRIGARALDADDRILYDAQTGAVLFDRDGTGRQGATQFADLDPGLALGADDFLIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K3</accession>
    <name>A0A2M9P9K3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Hist_deacetyl domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001130">
        <property type="protein sequence ID" value="PJN94201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="His_deacetylse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hist_deacetyl" evidence="2">
        <location>
            <begin position="2"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="21455" checksum="81AD8AC4671BDF31" modified="2018-04-25" version="1">MQNAFCAIRPPGHHAETRTAMGFCYFGNVVVGARHALDAHGLERVAIVDFDVHHGNGTQDLVWEDKRILFCSTQQIPLYPGTGNADETGAFGQIVNVPLPPGSGGPAFRAGFLGRVLPAIDEFAPELILISAGFDAHARDLMANINLTEADFAWATARLCDMADKHCRGRVVSTLEGGYDLGSLASSAAAHVRVLMERGNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K9</accession>
    <name>A0A2M9P9K9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001112">
        <property type="protein sequence ID" value="PJN94228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7799" checksum="D9CD46DB6E78964B" modified="2018-04-25" version="1">MSRLSGLQRVAEADGAPTLEARAAFAFIPSMIVLYAFGDLPAERDIQTLYALHDGAGLERLWLGPALIWQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N1</accession>
    <name>A0A2M9P9N1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_15655</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0053 family. Hemolysin C subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001098">
        <property type="protein sequence ID" value="PJN94243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002550">
        <property type="entry name" value="CNNM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005170">
        <property type="entry name" value="Transptr-assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03471">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01595">
        <property type="entry name" value="DUF21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01091">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51846">
        <property type="entry name" value="CNNM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0129">CBS domain</keyword>
    <keyword evidence="12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="CNNM transmembrane" evidence="11">
        <location>
            <begin position="1"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="10">
        <location>
            <begin position="88"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="10">
        <location>
            <begin position="152"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN94243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="32458" checksum="B3D8F9F2E23D7F31" modified="2018-04-25" version="1" fragment="single">PEDVAARVAPAMRMVSRIAAPLVWLLDKSGQLVLGLLGQSGKAERDLSDEEIKMVISEAASAGVIEHAETQMIAGVMRIADRTARGLMTPRHEVVTVDMTDSLSDIAEKFRDTRRSRLPVRDGDAENMIGVLTAADLLAADTADPEFDLRALVHQTPVVHEGMDSLAVIERLRESAVHMVLVYDEYGHFEGIITPMDLLEAITGEFSDSGSDDEPKITLREDGSMLVAGWMQVDEFADRMGIKLDADREFETVAGLVLEVAGALPQVGDVVSIQGWRVEVVDLDGRRIDKLLVSKEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA72</accession>
    <name>A0A2M9PA72_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Di-heme enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14620</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000991">
        <property type="protein sequence ID" value="PJN94421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="40"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="24632" checksum="0091E49FC4E32DB4" modified="2018-04-25" version="1" fragment="single">PAPDLATVTRALAAFQRSLISVGSAYDRAKRGGEPEAMSPAARRGEALFFDHRLECYHCHGGLHFTDNRQTARSRFSESAYHNTGLYNLDGTGAYPAFGKGLAEITGRPEDLGRFRTPSLRNVAVTAPYMHDGSVATLSEAIAHYAAGGRTIAQGPHAGVGAASPRKSGLLRGFTLSDAEKADLIAFLESLTDEGFLVDPAFADPWPEDHPASVDRRPVAITQPRKFRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB3</accession>
    <name>A0A2M9PAB3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-hydroxytetrahydrobiopterin dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000952">
        <property type="protein sequence ID" value="PJN94476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003495">
        <property type="entry name" value="CobW/HypB/UreG_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02492">
        <property type="entry name" value="cobW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="1">
        <location>
            <begin position="259"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="324" mass="35483" checksum="DEB3BFFA02923C3C" modified="2018-04-25" version="1" fragment="single">MTGTRLPVTVLSGFLGAGKTTLLNHILNNREGRRVAVIVNDMSEVNIDADLVREGASLSRSEEKLVEMTNGCICCTLRDDLLTEVRRLAAEGRFDCLLIESTGIAEPLPVAATFAFRDEDGESLEDVARIDAMVTVVDAVNLLGDFSSHDFLADRGESLGEDDARTLVDLLTDQIEFADVVVLNKVTDAGPVRADAARKIVRALNPVARLIETDRSRVPLGAVLETGLFDFERAHRHPLWAQELYGFRDHVPETEEYGVSSFVYRARAPFHPARVHEALNGALPGVIRAKGHFWIATRPDWVAEFSLAGAVSSVAPLGRWWAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB6</accession>
    <name>A0A2M9PAB6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase_M78 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000951">
        <property type="protein sequence ID" value="PJN94477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="19"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9188" checksum="21A3A8C2D8A481D4" modified="2018-04-25" version="1">MVLGHPPLPLIKADGARAYVKELEDEASWLGPALLVSEEAALHIVEQGWTAVEAGRRYGVSARLVKMRVQVTGAKTRLARRRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH0</accession>
    <name>A0A2M9PAH0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000927">
        <property type="protein sequence ID" value="PJN94524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11303" checksum="46483C911D59D58E" modified="2018-04-25" version="1" fragment="single">RFTAETQVRTDRIVGESGLPAFESAGPRWGDRIDLSGIDADQGTPGDQAFVFGGHGPGRVWLEERGDVTIVQAQVANHDNLRVRIAIEDGDVAAADYSRHDFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI7</accession>
    <name>A0A2M9PAI7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phospholipase D</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Choline phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">cls</name>
        <name evidence="13" type="ORF">CNY89_13870</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could be a virulence factor.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000914">
        <property type="protein sequence ID" value="PJN94548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008808">
        <property type="term" value="F:cardiolipin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032049">
        <property type="term" value="P:cardiolipin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022924">
        <property type="entry name" value="Cardiolipin_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025202">
        <property type="entry name" value="PLD-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001736">
        <property type="entry name" value="PLipase_D/transphosphatidylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13091">
        <property type="entry name" value="PLDc_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00155">
        <property type="entry name" value="PLDc"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04265">
        <property type="entry name" value="bac_cardiolipin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50035">
        <property type="entry name" value="PLD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0964">Secreted</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="PLD phosphodiesterase" evidence="12">
        <location>
            <begin position="151"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="PLD phosphodiesterase" evidence="12">
        <location>
            <begin position="327"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="414" mass="45695" checksum="E52758C2F648540E" modified="2018-04-25" version="1" fragment="single">RLRAALARLPSFSEISAHEGEREAELPEHLTPLFRVGESISGFPPVAGNRAELMADSDAAITAMIADIDAATDHVHICFYIWLPDGNGLRMVEAVKRAARRGVTVRAMADDLGSRLLIRSPHWTDMQEAGVRLVRTLAIGFILLRPLRGRIDMRNHRKIVVVDNKVTYCGSQNCADAAFAIKAKYAPWVDAMMRFEGPIVRQNQHLFASDWMAHTTEDLSELVGAPVGEVGPGFVAQVIGTSAAIRQSGMPEIFETLMYAARRELVVTTPYYVPDEPIQAALCASARRGVHTTLIVPKRNDSWIVAAASRSYYLGLLEAGVHLYEYRPGLLHTKSLTLDGEVTLIGSANIDRRSFELNFENNILLADPGMTAIMRARQADYLAQSDRVETATVEAWSLGQRLRNNTIAMFGPVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ1</accession>
    <name>A0A2M9PAJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13805</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000909">
        <property type="protein sequence ID" value="PJN94557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="28"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="60"/>
            <end position="67"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="268" mass="30487" checksum="89074716F1C4AF82" modified="2018-04-25" version="1">MSEPHPVDASDLAPVHTDRLKVSDEIAIQIIEMNKWYGQFHVLRDINLTVRRGERIVIAGPSGSGKSTLIRCINRLEEHQKGKIIVDGVELTSDLKNIDKIRSEVGMVFQHFNLFPHLTILENCTLAPIWVRKTPKKEAEETAMHFLRKVRIPEQALKYPGQLSGGQQQRVAIARSLCMRPKIMLFDEPTSALDPEMIKEVLDTMIELAEEGMTMLCVTHEMGFAQAVANRVIFMDQGQIVEQNTPYEFFNNPQSERTKLFLSQILGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB01</accession>
    <name>A0A2M9PB01_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">OmpA-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000813">
        <property type="protein sequence ID" value="PJN94716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpA-like" evidence="1">
        <location>
            <begin position="44"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="21232" checksum="E53A81F08430F148" modified="2018-04-25" version="1" fragment="single">VYVGSLTVPLHNAWADAAIAYQKEKYPNMEMVGDGSLVFPDAVLFAAGEARITPELRGFLERICLPWFRTLERTGVAISDLRIEGHASSEWTGLTPEQAYLANLALSQDRAHAVLSTCLELVPGPEGDWARRRATAIGYSSSHPVLSGGREDQDKSRRVVFRVDLSLREVIEGIADEVQRLDPLAAKRQVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB10</accession>
    <name>A0A2M9PB10_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ABC transmembrane type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_12865</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000815">
        <property type="protein sequence ID" value="PJN94712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="1"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="20586" checksum="44D0A23A482DC154" modified="2018-04-25" version="1">MCRCRGRILQVAVTAYTTLVRGVPDLVMMLLIYFGGQRLTNLAAGALGMGRVDVSPFVAGVLALGFVYGAYLTETFRGAYLSVPRAQIEAAMALGLRGMRLQRLVVLPQLTRMALPGTANVWQVLVKATALVSVIGLQDLVGLADAAGKTTREPFVFFSAVLLVYLGITWVSTQLFARAERRTALVGRDAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB52</accession>
    <name>A0A2M9PB52_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000783">
        <property type="protein sequence ID" value="PJN94767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014550">
        <property type="entry name" value="UCP028704_OpgC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38592">
        <property type="entry name" value="PTHR38592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10129">
        <property type="entry name" value="OpgC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="198"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="239"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="281"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="324"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="362"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="392"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="392" mass="43433" checksum="8397AE843CE3482E" modified="2018-04-25" version="1" fragment="single">MNRMVVLDGFRGLFLLLMALLHFNGLTDSWLGYLHHGKFGWVEDAQGFVFISGLVVGLVYGRKYLRAPSLGAIFPAILARVRTIYAHQAALILILLAAALLLGEMAGPDLAPYREAPFTFSLASLMLVSSSANMGILPMYVFFLLATPFAFRALHRGQVAPFFAAILLAWTAAQTNLAGMLFHQGQLALVAQGVDARFGIYFSLLGWQALFFCGLYVGYLMAEDRLDLSFLRQGQWRSVFFLATGAIVLLGIYDLVVEHRLLGEDYTNRVIQKSPRSVLGYLYPVAFAVDLFVVVWLLTVGREDRRALVRAASKGLRWLVTRPMFTLLGAHSLHVFSTHILAFYVLATVMPMTDFSQGGRTLALALALGSLYVVALGRNWLQSRSLSRREIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB65</accession>
    <name>A0A2M9PB65_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Translation initiation factor IF-1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">infA</name>
        <name evidence="5" type="ORF">CNY89_12505</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Component of the 30S ribosomal translation pre-initiation complex which assembles on the 30S ribosome in the order IF-2 and IF-3, IF-1 and N-formylmethionyl-tRNA(fMet); mRNA recruitment can occur at any time during PIC assembly.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the IF-1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000782">
        <property type="protein sequence ID" value="PJN94768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04451">
        <property type="entry name" value="S1_IF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00075">
        <property type="entry name" value="IF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006196">
        <property type="entry name" value="RNA-binding_domain_S1_IF1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004368">
        <property type="entry name" value="TIF_IF1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33370">
        <property type="entry name" value="PTHR33370"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01176">
        <property type="entry name" value="eIF-1a"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00008">
        <property type="entry name" value="infA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50832">
        <property type="entry name" value="S1_IF1_TYPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2 3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="S1-like" evidence="4">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8255" checksum="37D19D6A1553F78E" modified="2018-04-25" version="1">MAKEELLEFPGVVTELLPNATFRVELENGHVIIAHTAGKMRKNRIRVLAGDKVQVEMTPYDLTKGRINYRFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB76</accession>
    <name>A0A2M9PB76_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000768">
        <property type="protein sequence ID" value="PJN94794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="29" mass="3411" checksum="C94BDEF8CB16B98F" modified="2018-04-25" version="1" fragment="single">MQRGIAMVFQSYALYPHMTVRDNMSFGMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB89</accession>
    <name>A0A2M9PB89_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 4">30S ribosomal protein S9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpsI</name>
        <name evidence="6" type="ORF">CNY89_12345</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the universal ribosomal protein uS9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000766">
        <property type="protein sequence ID" value="PJN94797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00532_B">
        <property type="entry name" value="Ribosomal_S9_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000754">
        <property type="entry name" value="Ribosomal_S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023035">
        <property type="entry name" value="Ribosomal_S9_bac/plastid"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21569">
        <property type="entry name" value="PTHR21569"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00380">
        <property type="entry name" value="Ribosomal_S9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="25"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00016789"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17454" checksum="159C8D69D5952A32" modified="2018-04-25" version="1">MADTLSSLDQLKDAVLTGSPEAEAAPRREPQRDSLGRSYATGKRKDAVARVWVKPGSGKITVNGKPVAEYFARGVLQMVIGQPFTVAGVEGEFDVMATVKGGGLSGQAGAVKHGISQALQLFEPSYRPALKAAGFLTRDSRVVERKKYGRAKARRSFQFSKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH4</accession>
    <name>A0A2M9PBH4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Baseplate assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000723">
        <property type="protein sequence ID" value="PJN94872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10937" checksum="3290B80BDE381932" modified="2018-04-25" version="1" fragment="single">MSGFGAIDLSRLPPPDVVERLDFETILGAMKADLIARAPDLAPALALESEPAVKILEVAAYRELLLRARINDAARAVMIATATGADLDHLAALFGVARFVLDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM3</accession>
    <name>A0A2M9PBM3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MPTase-PolyVal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000696">
        <property type="protein sequence ID" value="PJN94919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041459">
        <property type="entry name" value="MPTase-PolyVal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18818">
        <property type="entry name" value="MPTase-PolyVal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MPTase-PolyVal" evidence="1">
        <location>
            <begin position="39"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18818"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="20287" checksum="6E2D5B2E2D5E64F0" modified="2018-04-25" version="1">MMFTKLYHVFNADQIDGLPESYYRRPEPARDLGTEPDAELEAFFAATGAIIDTSDDPRAYYNPVADRIHMPPVGTFESAGAYYATLAHEATHWTGHGSRLDRIKKFADRKAYAFEELVAELGNVILCTHLGLTPDFEQSGAYVESWLKALKEDKRAIFRAAAEGQKAADLLLALADDEKEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU2</accession>
    <name>A0A2M9PBU2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transketolase</fullName>
            <ecNumber evidence="3">2.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11015</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000649">
        <property type="protein sequence ID" value="PJN95013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02012">
        <property type="entry name" value="TPP_TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033247">
        <property type="entry name" value="Transketolase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522">
        <property type="entry name" value="PTHR43522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="2">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="332" mass="36048" checksum="3A8ADA8929C30DA4" modified="2018-04-25" version="1" fragment="single">MQISEIRARHPDHWRRAAALRVLAMDAVEAANSGHPGMPMGMADVATVLFEKHLKFDAANPLWPDRDRFVLSAGHGSMLLYGLLHLTGHPGMPLDELKRFRQLGSKTEGHPERHQGNGIETTTGPLGQGIATAVGMAMAEEHLAARWGRKVVDHRTWVIAGDGCLMEGVSHEAIGLAGVQKLDRLIVLWDDNGISIDGKVSLSDVTDQIARFKAAGWSTHSCDGHDPEDIDRALTEAAASPCPPSSPRKTHIGFGAPTKQDTKGAHGSPLGATEIAQVREIYGWDHPPFEIPQDVRDAWTAIGARGASERAAWEERFAKLSGAKQAEFERIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU4</accession>
    <name>A0A2M9PBU4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="14">Adenosylcobinamide kinase</fullName>
            <ecNumber evidence="8">2.7.1.156</ecNumber>
            <ecNumber evidence="9">2.7.7.62</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Adenosylcobinamide-phosphate guanylyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">CNY89_10975</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>adenosylcob(III)inamide + ATP = adenosylcob(III)inamide phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15769"/>
            <dbReference type="ChEBI" id="CHEBI:2480"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58502"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.156"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>adenosylcob(III)inamide + GTP = adenosylcob(III)inamide phosphate + GDP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15765"/>
            <dbReference type="ChEBI" id="CHEBI:2480"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:58502"/>
            <dbReference type="EC" id="2.7.1.156"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>adenosylcob(III)inamide phosphate + GTP + H(+) = adenosylcob(III)inamide-GDP + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:22712"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:58502"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="EC" id="2.7.7.62"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 5/7.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 6/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the CobU/CobP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.156" evidence="8"/>
    <dbReference type="EC" id="2.7.7.62" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000645">
        <property type="protein sequence ID" value="PJN95020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00236"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043752">
        <property type="term" value="F:adenosylcobinamide kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008820">
        <property type="term" value="F:cobinamide phosphate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003203">
        <property type="entry name" value="Cobinamide_kinase/P_G-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34848">
        <property type="entry name" value="PTHR34848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02283">
        <property type="entry name" value="CobU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12 16" id="KW-0418">Kinase</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00003889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00005159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00007490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00012016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00012523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00029570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00030571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN95020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12508" checksum="ABA0697BC4F4E4A9" modified="2018-04-25" version="1">MAAHRPDLPPGLLPPLAGPADLEAAPRGRPVLVDCLTLWLSNLMLAERDLPAETDCLLATLARPHGPWVLVSNEVGLGIVPDNALARRFRDAAGLLNQRVAAVATCVTLAVAGLPLKVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ7</accession>
    <name>A0A2M9PBZ7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Septum site-determining protein MinD</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Cell division inhibitor MinD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">minD</name>
        <name evidence="11" type="ORF">CNY89_10705</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">ATPase required for the correct placement of the division site. Cell division inhibitors MinC and MinD act in concert to form an inhibitor capable of blocking formation of the polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with MinC and FtsZ.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParA family. MinD subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000623">
        <property type="protein sequence ID" value="PJN95065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010223">
        <property type="entry name" value="MinD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025501">
        <property type="entry name" value="MinD_FleN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003092">
        <property type="entry name" value="MinD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01968">
        <property type="entry name" value="minD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="10">
        <location>
            <begin position="3"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011626"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025436"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00032845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="29537" checksum="F8B3D329F703F09B" modified="2018-04-25" version="1">MAKIIVVTSGKGGVGKTTSTAAIGAGLAMRGKKTVVIDFDVGLRNLDMIMGCERRVVFDFINVIQGDAKIKQALITDRRLENLSILPTSQTRDKDALTLEGVEKVLNELRDQFDYIICDSPAGIERGAHLAMYFADEAVVVTNPEVSSVRDSDRVLGLLSSKTHLAEKAEGSVKAHLLLTRYDPARVAKGEMMKVEDILEILSIPLLGIIPESPAVLRASNVGTPVTFDTKSNAGKAYEDAVSRLIGEQIEMRIQTTDKPSLFQRLLRRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC16</accession>
    <name>A0A2M9PC16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000609">
        <property type="protein sequence ID" value="PJN95095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14590" checksum="7B01DD80F068B4A1" modified="2018-04-25" version="1" fragment="single">TPRRRPQRPSSPPRPQRIARLRSSAAAEAEKACRAFAPCWGERVQVDASIACENAVERLGKFSVRWTDGMLEPKFPRVVWADEEAGTLYFGGDKIEFQNGFGAWQPYIYACKFDPATLQVLEVGAEPGRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC1</accession>
    <name>A0A2M9PCC1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">BPL_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000574">
        <property type="protein sequence ID" value="PJN95168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003142">
        <property type="entry name" value="BPL_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02237">
        <property type="entry name" value="BPL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL_C" evidence="1">
        <location>
            <begin position="2"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5003" checksum="E67BE64A98DD7F65" modified="2018-04-25" version="1" fragment="single">LPGREVTGLFETIDATGALVLATPEGRVTLPAADVHFPHEPRHAARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC4</accession>
    <name>A0A2M9PCC4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000562">
        <property type="protein sequence ID" value="PJN95195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="17"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="49"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13617" checksum="25DB85DA8AA615C2" modified="2018-04-25" version="1">MTENPHMTPPQIEKSSIGVYAAAAILVLFCGWTWWAGGKFAKIDGGIEAVTANQEAAQLRAEARQAEIEKRSSELEARIRPLELQTAAMTATLQSINNNLLQVGADIRDLGRSVRDNDKAEGKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL5</accession>
    <name>A0A2M9PCL5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000518">
        <property type="protein sequence ID" value="PJN95280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012106">
        <property type="entry name" value="Phage_Mu_Gp1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10123">
        <property type="entry name" value="Mu-like_Pro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="173" mass="18241" checksum="511C9BF13A35B569" modified="2018-04-25" version="1">MRRVEPEQGGGPAEPLGISRLRRAAREVPGRPGGGGGRRARRLLWPDRRVSAARCHPLERLPGLALNRIATFEAGEKTAREAEIVAAVDAAVAAGKIAPASKDYHLASCRAEGGLDRFRNMIAAAPAITAASGADRKDPPAGHAAGLNAEELAMCRAFNMTPEDFAKTKSAQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR5</accession>
    <name>A0A2M9PCR5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000508">
        <property type="protein sequence ID" value="PJN95304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7954" checksum="2753E402B5E31D2F" modified="2018-04-25" version="1" fragment="single">MIVNTALFLLFVALTLFGIGSLLFAIVARGRRKRHFQRGLVGLGLALVAAVAGTISSPEYQADRAAERVAREAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD29</accession>
    <name>A0A2M9PD29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">L-idonate 5-dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000446">
        <property type="protein sequence ID" value="PJN95451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6767" checksum="2A2CB41F105E7197" modified="2018-04-25" version="1" fragment="single">ELDLRGSFRFNREFAEAVDLIGAGRVDVLAIVTARRPLAEAPEAFRLALDRNRSVKVLLTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD36</accession>
    <name>A0A2M9PD36_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000453">
        <property type="protein sequence ID" value="PJN95434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="4066" checksum="E515CB34C2967402" modified="2018-04-25" version="1" fragment="single">PATGFDEVEIPDALAARQPEPLWARRRASYQARVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD51</accession>
    <name>A0A2M9PD51_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000442">
        <property type="protein sequence ID" value="PJN95460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028350">
        <property type="entry name" value="DNAC/ATP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003073">
        <property type="entry name" value="DNAC_TnpB_IstB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="101"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="28648" checksum="DFFCDE18E60CBC20" modified="2018-04-25" version="1">MTEAPEILLAHHLKTLKLPTFLREYEKLARQCAAEGLDHVRFLARLVELELIDRERRMIERRVKAAKFPAVKSLDSFDFKAIPSLNKIQVLELARCEWIERRENVIALGPSGTGKTHVSLGLGLAACQKGLSVGFTTAAALVHELMEARDERRLLRLQKQLAGHKLLIIDELGFVPLSKTGAELLFELISQRYERGSTLITSNLPFDEWTETFGSERLTGALLDRLTHHVTILEMNGDSYRLTQSRAQKTAAKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD74</accession>
    <name>A0A2M9PD74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Flagellar biosynthetic protein FliQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_08160</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FliQ/MopD/SpaQ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000427">
        <property type="protein sequence ID" value="PJN95497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002191">
        <property type="entry name" value="Bac_export_3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34040">
        <property type="entry name" value="PTHR34040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01313">
        <property type="entry name" value="Bac_export_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004669">
        <property type="entry name" value="FliQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00952">
        <property type="entry name" value="TYPE3IMQPROT"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0966">Cell projection</keyword>
    <keyword evidence="8" id="KW-0969">Cilium</keyword>
    <keyword evidence="8" id="KW-0282">Flagellum</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9604" checksum="9BBD0DF664171017" modified="2018-04-25" version="1">MDETAVLDILRQALWVALAVSTPILAVALVVGLAIGLVQALTSVQEMTLTFVPKLGAILVVFWITMSFSGQSLVRFYQDQIIPLVMTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD80</accession>
    <name>A0A2M9PD80_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000426">
        <property type="protein sequence ID" value="PJN95501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11284" checksum="79B8F1A2912CD84F" modified="2018-04-25" version="1" fragment="single">MTIVLPHDEAAEARKARRVAQASRIARLVETLGFGFLAPLVKAAAGDQPGANLKEAARLIGVPLFAIALFLVDKQSLLHGSLARGRPRPLLNTHRAFRVRDNRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ1</accession>
    <name>A0A2M9PDJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione-dependent reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07610</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000388">
        <property type="protein sequence ID" value="PJN95582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016639">
        <property type="entry name" value="GST_Omega/GSH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32419">
        <property type="entry name" value="PTHR32419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13409">
        <property type="entry name" value="GST_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015753">
        <property type="entry name" value="GST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01206">
        <property type="entry name" value="Xi.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="160"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="1">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR015753-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="324" mass="35442" checksum="D6A91EB4EFDA1B81" modified="2018-04-25" version="1">MLVDGRWTEDWQPVQATDAKGGFVRQTSSFRSWVTPDGAPGPTGEGGHPAEAGRYHLYVALICPWASRTLIGRKLKGLEDAISVSVVEPALSPQGWRFGDYPGSDRDELNGATYLHELYTRADPQFTGRATVPVLWDKARGTIVNNESEDILRMLNSGFGDLARADLDLYPADLAPEIDALNARVYPQLNNGVYRAGFATTQVAYDEAFAEVFGMLAELEARLAAGGPFLTGDRLTEADVRLFVTLVRFDPAYHGLFKCNLRRIVDYPALSAWLARTLDVPGVRETVSIDHIKQGYYAIRSLNPNGVVPRGPDLPGLAPVVLAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW0</accession>
    <name>A0A2M9PDW0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">30S ribosomal protein S5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rpsE</name>
        <name evidence="13" type="ORF">CNY89_06685</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body.</text>
    </comment>
    <comment type="function">
        <text evidence="8">With S4 and S12 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 30S ribosomal subunit. Contacts proteins S4 and S8.</text>
    </comment>
    <comment type="domain">
        <text evidence="8">The N-terminal domain interacts with the head of the 30S subunit; the C-terminal domain interacts with the body and contacts protein S4. The interaction surface between S4 and S5 is involved in control of translational fidelity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8 10">Belongs to the universal ribosomal protein uS5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000322">
        <property type="protein sequence ID" value="PJN95745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01307_B">
        <property type="entry name" value="Ribosomal_S5_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000851">
        <property type="entry name" value="Ribosomal_S5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005712">
        <property type="entry name" value="Ribosomal_S5_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005324">
        <property type="entry name" value="Ribosomal_S5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013810">
        <property type="entry name" value="Ribosomal_S5_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018192">
        <property type="entry name" value="Ribosomal_S5_N_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13718">
        <property type="entry name" value="PTHR13718"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00333">
        <property type="entry name" value="Ribosomal_S5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03719">
        <property type="entry name" value="Ribosomal_S5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01021">
        <property type="entry name" value="rpsE_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00585">
        <property type="entry name" value="RIBOSOMAL_S5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50881">
        <property type="entry name" value="S5_DSRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8 9" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="S5 DRBM" evidence="12">
        <location>
            <begin position="19"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="164"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016778"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01307"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20543" checksum="B1B0427BD96C8403" modified="2018-04-25" version="1">MAREDNRRDRRDREENPEFADRLVAINRVSKTVKGGKRFGFAALVVVGDQKGRVGYGKGKAREVPEAIRKATEQAKRQLIRVPLREGRTLHHDMNGRHGAGKVVMRTAPAGTGIIAGGPMRAVFEMLGVHDVVSKSLGSQNPYNMIRATIDGLQRQISPRMIAQRRGKKVSDILPRSDAAPAESAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW4</accession>
    <name>A0A2M9PDW4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Undecaprenyl-diphosphatase</fullName>
            <ecNumber evidence="4">3.6.1.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Bacitracin resistance protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Undecaprenyl pyrophosphate phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">CNY89_06880</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:28094"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="EC" id="3.6.1.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UppP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.27" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000336">
        <property type="protein sequence ID" value="PJN95712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050380">
        <property type="term" value="F:undecaprenyl-diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003824">
        <property type="entry name" value="UppP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30622">
        <property type="entry name" value="PTHR30622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02673">
        <property type="entry name" value="BacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="107"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="16">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00032707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN95712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="24222" checksum="EE002A2241305DE8" modified="2018-04-25" version="1" fragment="single">MATQSVFDALTLGVLEGLTEFIPVSSTGHILLAGHFLGFHSTGKTFEVVIQLGAVLAILLVYAGRLWEVARAIPTDPNARRFVLSVLVAFIPAVIVGVLAHDVIKNVLFETPILIAVMLILGGFVLLWVDRRAYHPEYEDAMRFPIRVALGIGLIQCLAMIPGVSRSGSTIVGGLLLGASKRAAAEFSFFLSMPTMAGAFAYDLYKNRDVLSFDDATIIAIGFAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ4</accession>
    <name>A0A2M9PDZ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Parvulin-like PPIase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Peptidyl-prolyl cis-trans isomerase plp</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Rotamase plp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_06570</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PpiC/parvulin rotamase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000313">
        <property type="protein sequence ID" value="PJN95767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000297">
        <property type="entry name" value="PPIase_PpiC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13145">
        <property type="entry name" value="Rotamase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PpiC" evidence="5">
        <location>
            <begin position="20"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00030642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF13145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="12498" checksum="4F58BBB4089A0D5C" modified="2018-04-25" version="1" fragment="single">RTSSRCRSTGPSTRRALENAFGGGFAAALAEVPVGQWSGPVRSGLGLHLVEVTGSEPARLAPFEDIRDHVAQQYDYYAVLDAQERMFRELLAKYDVRIEAGVPDAVMRDYVRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE10</accession>
    <name>A0A2M9PE10_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000308">
        <property type="protein sequence ID" value="PJN95781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="1">
        <location>
            <begin position="2"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17526" checksum="97443303FA7BA221" modified="2018-04-25" version="1" fragment="single">VASPPPSDELTALPLFEDRFLLAGSARQVSSLGAMRLRPEQMGAERLLLLDDGHCLADQALAACGLARKATRLDMRASSLATLCRLVEEGFGLTLLPELAVRAERAAAPRLALLRFAAPEPFRTISLVRRRTSSDEGWFAELAEILRGAGRSVLDQPPVPAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE13</accession>
    <name>A0A2M9PE13_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoserine aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.52</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.52" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000315">
        <property type="protein sequence ID" value="PJN95762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004648">
        <property type="term" value="F:O-phospho-L-serine:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="23955" checksum="AC0A0DBAD3B5C46F" modified="2018-04-25" version="1" fragment="single">EGLTFCDATSAAFAQDLPWDKLDVTTFSWQKAMGGEGGHGVLILSPRAVERLETFAPDRPLPKIFRMTKGGKLIEGIFLGETINTPSMLCIADAVDALDWMEGLGGLPATRARADANFAALQAWVDRTPWIENLAADPAVRSNTSVCLRIVDPQIAALDEAAQRDFVKKLTKLLETEGAALDIGGYRDAPPGLRLWCGSTVDTADVEALLPWLDWAFAAARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE20</accession>
    <name>A0A2M9PE20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cardiolipin synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_06390</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000302">
        <property type="protein sequence ID" value="PJN95797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027379">
        <property type="entry name" value="CLS_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13396">
        <property type="entry name" value="PLDc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="PLDc_N" evidence="7">
        <location>
            <begin position="19"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7407" checksum="E166EA073CBB01F3" modified="2018-04-25" version="1" fragment="single">MGFASFLILLHVTLQAFFIGRALLRPQREPASRLAWVVVILVAPVLGILAYVMFGETNLGRRRIAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE72</accession>
    <name>A0A2M9PE72_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000284">
        <property type="protein sequence ID" value="PJN95847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8462" checksum="C8892C86E75CFB5F" modified="2018-04-25" version="1">MDEDRLAEALERLHQAEKRILILEELAMATIAGLLQASPKAEIDIRAALETAAEDQNIDADPFAAALLSHVVNRLTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI8</accession>
    <name>A0A2M9PEI8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000245">
        <property type="protein sequence ID" value="PJN95959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="22"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7133" checksum="5D720584D6852AFA" modified="2018-04-25" version="1" fragment="single">MAEPALRLTGVTKRFGPLVAVDDVSFQVARGEIHALLGENGAGKTTLMNILFGRYLADAGEIEAFGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ1</accession>
    <name>A0A2M9PEJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thiamine pyrophosphate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000251">
        <property type="protein sequence ID" value="PJN95938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="2">
        <location>
            <begin position="21"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8380" checksum="D5E54DE9BDF9DA08" modified="2018-04-25" version="1" fragment="single">MLTLQDAPAAPGQDLNADPRSVAAWIARFLQARGIDRIFGLQGGHIQPIWDHCARLGIRIVDVRHEGAAVHMAHAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ4</accession>
    <name>A0A2M9PEJ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Di-trans,poly-cis-decaprenylcistransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">uppS</name>
        <name evidence="2" type="ORF">CNY89_05310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000241">
        <property type="protein sequence ID" value="PJN95971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00475">
        <property type="entry name" value="Cis_IPPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001441">
        <property type="entry name" value="UPP_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036424">
        <property type="entry name" value="UPP_synth-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10291">
        <property type="entry name" value="PTHR10291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01255">
        <property type="entry name" value="Prenyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64005">
        <property type="entry name" value="SSF64005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00055">
        <property type="entry name" value="uppS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14322" checksum="5AD23CA8179428E5" modified="2018-04-25" version="1" fragment="single">MYEYKSETKPTRTGGAAPAHVAIIMDGNGRWAESRGLPRLAGHKRGADRVREIVEACPELGISHLTLFAFSTENWKRPAAEVLGLFRLFRRYIKKEGARLVAEGVRVRFIGGRDRLEPDMQALMAGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL8</accession>
    <name>A0A2M9PEL8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glyco_trans_2-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000236">
        <property type="protein sequence ID" value="PJN95985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="37"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="376" mass="39827" checksum="9CF66055A9802A9D" modified="2018-04-25" version="1">MAQEPANQSPVDPGCASRETAGFIGNGYFPAVPPKLSVIVPVYNREATVAEAIASAIAAADGSGQPPGAIEIIVIDDGSSDDSAAAARAALAEGQGRVTGTVVIQKNAGPAAARNHGVSLSRAPHLAFLDSDDLWFSWTIRSCLDAIDAHPEAALYFLRPVSFSRDLPLQPRPALGVDHVRFDGFVGASLAHTAWSYGTSIAMVRRDAFTRLGGFDENFVCLEDTDLFIRLDTQGPCVLVLDGDLVGRRGGEADNLTNNWALVRDGVMNMKRKEAAGGYPGGAGGDPRRSAVVAVNAVKATRLCFANGATGSAYAMLLRNLWPIIRGGRSRWLWRLALTPALSLVRPKSFPFRFRPAILPGNERLATAAKATAVSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM2</accession>
    <name>A0A2M9PEM2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Probable potassium transport system protein kup</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">trkD</name>
        <name evidence="11" type="synonym">kup</name>
        <name evidence="12" type="ORF">CNY89_05150</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Transport of potassium into the cell.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cell membrane</location>
            <topology evidence="11">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the HAK/KUP transporter (TC 2.A.72) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000230">
        <property type="protein sequence ID" value="PJN96000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01522">
        <property type="entry name" value="Kup"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003855">
        <property type="entry name" value="K+_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023051">
        <property type="entry name" value="K+_uptake_low_affin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30540">
        <property type="entry name" value="PTHR30540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02705">
        <property type="entry name" value="K_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 11" id="KW-0406">Ion transport</keyword>
    <keyword evidence="10 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 11" id="KW-0630">Potassium</keyword>
    <keyword evidence="5 11" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="107"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="170"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="218"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="251"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="283"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="348"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="373"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="404"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="428"/>
            <end position="447"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="628" mass="66905" checksum="6F7C5FBF87612381" modified="2018-04-25" version="1">MTATTAEASAGHGGFWKLTLGSVGVVYGDIGTSPLYAMREAMTAASRDGGLTPGEVIGICSLLLWTLILIVTLKYVVLILRADNNGEGGTLSLVALAQRAVGKRTRWIFVLGVIGAALFYGDAIITPAISVLSAVEGLVLVEPRFADWVEPTAIAIIIGLFVIQSRGTESVAAFFGPITLVWFLTLGGLGLYHVGDKPAILAALNPWEAVEFLIDHRLGSLAVMGSVFLAVTGAEALYADMGHFGRGPIRVAWSTVVLPALALNYIGQGSLVLANPEAAHNSFFLLAPSWGLLPLVLLATLAAVIASQAVISGAYSLTHQAVQLGLLPRFEVRHTSDTQAGQVYLPKVNWLLLIGVVVLVVIFGSSAALASAYGIAVTGTMIITTLLAYTVLRNGWGWSAGLSALVLSPFLVVELIFLGANLEKFFDGGFVPVMLAALVALMMATWVRGSAILLLKAHAESISLTSLLRMLSGSKVAQAPGTAVFLTSDPDAAPSALLHNLKHNHVLHARNIIVTVTTATTPTVSDAERIVIEPLSDSFSRIRLTFGYMEQPNVPQALALARKEGVKFDIMSTSFFLNRRTLKPSPDQRMPLWQDQLFIAMTKSASDPTTFYRLPSNRVLELGQQMVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF25</accession>
    <name>A0A2M9PF25_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glyoxalase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000188">
        <property type="protein sequence ID" value="PJN96131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyoxalase" evidence="1">
        <location>
            <begin position="12"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10565" checksum="632D1E08D73A315E" modified="2018-04-25" version="1" fragment="single">MPQTPGPAGAHGLHHVTAVSTDMARTRAFYVDLLGLRLVKRTVAHEDPGAHHLFFGGRTGAPGTLEQSEIEAILDYIKSTWPEHIREQQAQRSNAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD5</accession>
    <name>A0A2M9PFD5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000155">
        <property type="protein sequence ID" value="PJN96246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="2">
        <location>
            <begin position="17"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="18185" checksum="CC2CB90D43F4E4FD" modified="2018-04-25" version="1">MQPTSLAQTKQLETYELTARPILREDVDLLHQLSIAVAWPHRREDWLLLLDVGQGIVACDEIGRVVGCAMWFPFGPALASIGMVITSPRLQAHGAGRWLMDRVFLEATEPTKVLNATRAAYRLYASMGFQPGPKVFQNQGIAAPSRNSRPSSPPHRRRRNTAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE4</accession>
    <name>A0A2M9PFE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000148">
        <property type="protein sequence ID" value="PJN96265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="7727" checksum="C667CE7B282112E8" modified="2018-04-25" version="1" fragment="single">MTGDAAPANSLAMRNLQRGIDAQTFLAILTAGQASCLRHGSRLAAASGARATGFPMSDLVERGGGRASPASGSPPCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF9</accession>
    <name>A0A2M9PFF9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Oxidored_molyb domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000145">
        <property type="protein sequence ID" value="PJN96277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000572">
        <property type="entry name" value="OxRdtase_Mopterin-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036374">
        <property type="entry name" value="OxRdtase_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00174">
        <property type="entry name" value="Oxidored_molyb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56524">
        <property type="entry name" value="SSF56524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_molyb" evidence="1">
        <location>
            <begin position="49"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="19461" checksum="6C6A33BC3C856E53" modified="2018-04-25" version="1">MSPSVIADAMRNRVVAGFSALALTAVLSFIPVFPAEAEADDVAITLSRGPGGETLELTLAQLAELPQVTVVTENEFSNGLVAYRGPLARDVLDELALMQFETLRFSAANDYYVEIPTEDLRRYDVIMAMQADGVPLARREKGPLWLMYPISDHEELLDPIYIHRLIWQLEKVEPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL1</accession>
    <name>A0A2M9PFL1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16798" checksum="32E1D07AF0C68523" modified="2018-04-25" version="1">MALRARSKLACKIADIDPLRLNEAVFAKHYNCAPETRAGSPRIFDEDGIVALRIFGDKTRIGWSTANAGELACSVLAEIQRNPEAEWVTIIWDIAGRRAMTSEKFLKEEESLTPIDPGWKLYQDCINVKAIRSYVRECLEEERTILGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP8</accession>
    <name>A0A2M9PFP8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methylmalonyl-CoA carboxyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000115">
        <property type="protein sequence ID" value="PJN96373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011763">
        <property type="entry name" value="COA_CT_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50989">
        <property type="entry name" value="COA_CT_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="CoA carboxyltransferase C-terminal" evidence="2">
        <location>
            <begin position="264"/>
            <end position="504"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="510" mass="55759" checksum="6C2BAEDA65E48C2D" modified="2018-04-25" version="1">MQKILQQLEDRRNEARLGGGAPRIKAQHAKGKLTARERIEVLLDEGSFEEFDMFKAHRCTDFGMGATTIPGDGVVTGWGTVNGRQVYVFSQDFTVFGGSLSETHAQKICKIMDMAVQNGAPVIGLNDSGGARIQEGVASLAGYADVFQRNIMASGVVPQISVIMGPCAGGAVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEIITAEDLGGARTHTSKSSVADGAYLDDITALLEVRRLVDFLPLSNREKPPARPFHDDPNRLDMSLDTLCPPNPNTPYDMKELILKVADEAEFFEIQADFAKNIITGFIRLEGSTVGVVANQPMVLAGCLDIDSARKAARFVRFCDAFEIPILTFVDVPGFLPGSSQELGGIIKHGAKLLFAYGEATVPKVTVITRKAYGGAYDVMASKHLRGDFNYAWPTAEIAVMGAKGAVEILYRSELGDAERIGERTKDYETRFANPFVAAERGFIDEVIMPHSTRRRVARAFASLRTKKLSNPWKKHDNIPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG20</accession>
    <name>A0A2M9PG20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-xylose ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xylF</name>
        <name evidence="3" type="ORF">CNY89_02435</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000092">
        <property type="protein sequence ID" value="PJN96459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048029">
        <property type="term" value="F:monosaccharide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015753">
        <property type="term" value="P:D-xylose transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013456">
        <property type="entry name" value="XylF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02634">
        <property type="entry name" value="xylF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014793121" evidence="1">
        <location>
            <begin position="22"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="26"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="35408" checksum="929E5DAD6A4A673E" modified="2018-04-25" version="1">MRNAILAAAFMAAGLSTAAQAQDMTVGVSWSNFQEERWKTDEAAIKAALEAAGAKYISADAQSSSAKQLSDVESLISQGADALIILAQDSAAIGPAVQAAADEGIPVVGYDRLIDDPRAFYLTFDNVEVGRMEARDVFKLAPKGNYVMIKGSPTDPNADFLRQGAQEILQAAIDSGDIKIVGEAYTEGWLPANAQRNMEQFLTANDNKVDAVVAANDGTAGGVVAALTAQGMQGIPVSGQDADHAALNRVAAGTQTVTVWKDSRELGKAAAEIAVDLAKGTEMTGVEGAGAWTSPSGKELTSKFLVPVPITKDNLGVVVEAGWITPEALCQGVKDGPAPCN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG57</accession>
    <name>A0A2M9PG57_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000072">
        <property type="protein sequence ID" value="PJN96531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="SSF52949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="133"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="152"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="17751" checksum="38D56A6D05F6C8D9" modified="2018-04-25" version="1" fragment="single">MAFQFVPETGAKPVHVIPAEGLAAWLAEQSPDRRAWISAMGFEAGLGETLVLPGPDGSPEAALFGWGKPPARGRDRFGLALAAMRLPAGRWRIESDGAEMDAGLEALGWLLAGYRFERYRSAVAKPQAELVVPTSAGKAQGSGPQARPARPEQQRGQERLSGRYDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA8</accession>
    <name>A0A2M9PGA8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Glucose-6-phosphate isomerase</fullName>
            <shortName evidence="7">GPI</shortName>
            <ecNumber evidence="7">5.3.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Phosphoglucose isomerase</fullName>
            <shortName evidence="7">PGI</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Phosphohexose isomerase</fullName>
            <shortName evidence="7">PHI</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">pgi</name>
        <name evidence="9" type="ORF">CNY89_01660</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the reversible isomerization of glucose-6-phosphate to fructose-6-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7 8">
            <text>alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11816"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="EC" id="5.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 7 8">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 2/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7 8">Belongs to the GPI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000060">
        <property type="protein sequence ID" value="PJN96588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00181"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004347">
        <property type="term" value="F:glucose-6-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd05015">
        <property type="entry name" value="SIS_PGI_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05016">
        <property type="entry name" value="SIS_PGI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00473">
        <property type="entry name" value="G6P_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001672">
        <property type="entry name" value="G6P_Isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023096">
        <property type="entry name" value="G6P_Isomerase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018189">
        <property type="entry name" value="Phosphoglucose_isomerase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035476">
        <property type="entry name" value="SIS_PGI_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035482">
        <property type="entry name" value="SIS_PGI_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11469">
        <property type="entry name" value="PTHR11469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00342">
        <property type="entry name" value="PGI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00662">
        <property type="entry name" value="G6PISOMERASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00765">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00174">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51463">
        <property type="entry name" value="P_GLUCOSE_ISOMERASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 8" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="4 7 8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="5 7 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="344"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="375"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="496"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="532" mass="56889" checksum="7CCCF77E2D6368BF" modified="2018-04-25" version="1">MTDDIWTALEQAGAAAEGRPILSLFEKNPDRFREFSARFGDMLFDFSKTNIDAHALTLLIELAQATGVPEKRDAMFRGDPINLTEGRAVLHTALRNRANTPVLVDGVDVMPEVNAVLARMADFSTAIRDGSIAGQGGAFTDVVNIGIGGSDLGPAMATLALAPYADGPRLHYVSNVDGAHVHDVLGKLDPATTLVIVASKTFTTIETMTNARTAQAWLKAALGTTEGHFAAVSTALDKTAVFGIDPSRVFGFWDWVGGRYSIWGAVGLPLMIAIGPERFGEFLDGAHAMDRHFVEAPLPENLPVLLGLVGVWHRNAMGYASRAVLPYDQRLSRLPAYLQQLDMESNGKSVGIDGALLPRASGPVVWGEPGTNGQHAFYQLIHQGTNVIPAEFLVAANGHEADLRNHHELLLANCLAQSEALMLGRDLAAALRTVADPSLAPHKVFAGNRPSTTLVYGRLDPATLGRIIALYEHRVFVEGAIWGLNSFDQWGVELGKELATALLPLVQAGQGYQSKDGSTAGLLAAVTALREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB1</accession>
    <name>A0A2M9PGB1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000065">
        <property type="protein sequence ID" value="PJN96562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="17723" checksum="7A1F498FA48F97E1" modified="2018-04-25" version="1" fragment="single">MSGLLALLRAVLMPVILAVLGAATLAPLLFLGATDLQSAARYRPDGGDAPVTPLSNLAATALFRAGFVRIAPTYDEAEGDEAPSETTWQTVRLPHVCTGDPLVKALVAAEVFMRPAWRRQFELALGEAWFAVGGRPPDWSYGMAQIRLATAREAILAAQARYGGFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN5</accession>
    <name>A0A2M9PGN5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Branched-chain amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000033">
        <property type="protein sequence ID" value="PJN96707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_6" evidence="1">
        <location>
            <begin position="16"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="30595" checksum="4364A2C9418EA5F2" modified="2018-04-25" version="1" fragment="single">MDRHGEGRHRFQPGTSDKVVAIVGADCSGVTTAVATNVAVPNGIVIISPSATSPALSTLDDKGFFFRTAPSDARQGEVLAEVLKDRGVTEVAVTYTNNDYGKGLSESFAQFFAANGGKILTSQPHEDGKGDYSAEVAALSASGAQHLMVFGYVDQGGRGIIQAALDTGAFESFFVGDGMYGESLIEAIGPELDGKVVGTVPGSDSPGAATLIDLATQAGFDGTSSYVAESYDAAALIALAIQKAGSTEGAKIAEAVTEVANGPGEPINVGELAKGLEILKSGGDVDYVGATGVELVGPGEAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR4</accession>
    <name>A0A2M9PGR4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Quinone-dependent D-lactate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.5.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">D-lactate dehydrogenase</fullName>
            <shortName evidence="2">D-LDH</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">dld</name>
        <name evidence="6" type="ORF">CNY89_00880</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 3">Catalyzes the oxidation of D-lactate to pyruvate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>(R)-lactate + a quinone = a quinol + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:51468"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:16004"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.1.5.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3 4">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
            <orientation evidence="2">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the quinone-dependent D-lactate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.5.12" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000029">
        <property type="protein sequence ID" value="PJN96721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031234">
        <property type="term" value="C:extrinsic component of cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102029">
        <property type="term" value="F:D-lactate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019516">
        <property type="term" value="P:lactate oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.610">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02092">
        <property type="entry name" value="DLDH_Dld"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016172">
        <property type="entry name" value="D-lactate_DH_C-sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016173">
        <property type="entry name" value="D-lactate_DH_C-sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012256">
        <property type="entry name" value="D_lactate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015409">
        <property type="entry name" value="Lactate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09330">
        <property type="entry name" value="Lact-deh-memb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000101">
        <property type="entry name" value="D-lactate_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1 2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="2 3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2 3" id="KW-0874">Quinone</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="5">
        <location>
            <begin position="36"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <begin position="71"/>
            <end position="75"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <begin position="79"/>
            <end position="80"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="144"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="154"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000101-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="559" mass="61304" checksum="EB0A681F41238053" modified="2018-04-25" version="1">MVARNTLIAELTRIVGAGHVLTAERQTRAFTKGFRYGGGPVAAVVRPGSLVEQWRVLNAVVASGRIVIFQAANTGLTGGSTPWGEDYDREIVLVSLRRLKGVHLLANNQVVCLPGATLDTLEKRLRPLGREPHSVIGSSCIGASVLGGVCNNSGGALIQRGPAYTEMSLYAEVRPDGSVALVNHLGLALGNDPEEILARVERGDLPDPEPTEAWASDREYVAHVRDVEAATPARFNADPRRLRESAGCAGKLAVFAVRLDTFEAEKDTQVFYVGTNDPAELTEIRRHILAHFETLPIAGEYIHRDAYDVAAKYGKDTFLFIQKAGTDRMPAFFAAKAKVDALTDRLGLGAVVSDRVAQALASVLPDHLPARMNAFRDRFEHHLLLRMGGAGVAEARAYLAGRFPSDSGDMFECTPEEGKAAFLHRFAVAGAAVRYRAVHSREVEDIVALDIALRRNDQDWLERLPAEIDDAIIVKLYYGHFFCHVFHQDYVVKKGHDCLALEHAMWKLLDDRGAEYPAEHNVGHLYRAKPALADFYRAIDPTNSLNPGVGQTSRCAHWH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY2</accession>
    <name>A0A2M9PGY2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Urea ABC transporter permease subunit UrtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">urtB</name>
        <name evidence="7" type="ORF">CNY89_00470</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000014">
        <property type="protein sequence ID" value="PJN96791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017779">
        <property type="entry name" value="ABC_UrtB_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03409">
        <property type="entry name" value="urea_trans_UrtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="182"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="332" mass="35707" checksum="17EE39152EDB532C" modified="2018-04-25" version="1" fragment="single">CAWLLRPLAASPDPALSEAAQDAITSIEQRQALWAYGQNLWFGLSLGSVLLLAAVGLAITFGVMGVINMAHGELIMVGAYTTFITQQVIRTHFPGLFDWSLLIATPLAFLLAGAIGVAIERGIVRFLYGRPLETLLATWGVSLILQQTVRTLFGPNNREVGNPSWMSGAFQFGELTITWNRFYIILFCISVFLGLLALLKRTPLGLQMRAVTQNRAMASEMGIRTAKVDALTFGLGAGIAGLAGVALSQIDNVSPNLGQAYIIDSFLVVVFGGAGNLWGAFAAAFTLGIANKMLEPWAGAVLAKILILVFIILFIQKRPRGLFPQRGRAVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH06</accession>
    <name>A0A2M9PH06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000008">
        <property type="protein sequence ID" value="PJN96827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="854" mass="89981" checksum="7B6D580C7F07688E" modified="2018-04-25" version="1">MARRVIANAAGAVATAHAPTGELLGVIEEDTTPPALTRPVVAPAAALANGSLPVTVIYPAGATGVVLWVPTRGISLPMANGVNFLRQGDLGYDTTIDAICALFEARGAGGATSNWIPRLLVWAEAIELPPVDELVTLVSGGTMTTSAQVGGAITLGPNAVWAGSVQQTDSWIETSPNGAAPWTNAGDLTAVPNSVGTYFRAIWAAYGPGASGNSQWHTTASAARQIVAAEVDPIAAGDVTFHASFFRPNTQTVDFAPEFTVSGAQALMQWTTVDPPTEASWADVIAGPNGGARKSTSNVAAGNFTAAGTAKRGNLRLRHRPNTGVPWSDPSPKLTVPVAVNPTNALYALLQPSDAAIRSALQANLIPYAINKPTNSGGGNAGINDRKWDPIIWVMASLAGVNTTFNGIGAGRNPRAYAIAQFQSWCSDAGTTAPPMRSGYHGQHEMRAVAFFAMCRLDPNIWNAAGITDTMRNRARWLMKLAGVANVWIASSLHTTYYGGGFGSATGPRSLVGWTAGNNNVPNFSSPPRLTPHLVNAFMARDTGNPTAFADFLADYDRETFFAEGEALGGMTEARRIVSRRWLAADQLTVYGTASTLGAGPTDAQVEAACHAAPVRLVGTGGNYTLAQPRQAMASELERVFSLPVRPGLLNARKGAGAILGSNTSVAPYNNPAQKYGITMDAQTEGRLRACHGVPTVDRGAQAGANGNTGTGVTIYEDIWLNLPDKGEIGMYLEFDTTDGGEAGGPNRRSAPTYGASGLGAIMDALVVMIYYGIIEPDDALFDTAKARWRVGIRHFNYAAKHGYLGYAKGGFDSDNNVDWSPLYVARMYSWPAFMGMMDRVAVFWGQPPFPTDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH40</accession>
    <name>A0A2M9PH40_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="20911" checksum="09664574650840D0" modified="2018-04-25" version="1">MSAPVEIPTGYTPGPWRWEVDRKSRSVQICGGRPAGHFDKTVLSFKRWGMRSAAPVFWFWKDGRHWSDEPKRAHEIAEPFPGREHHADWLADIDHPDARLIALAPQMAAELLSLRADVTRLTASLAAAEGEAGRLDAERYRFWEGLSEVVSRCKYLDGEELGDIAEAALSGKDVEEVMASRLAKGAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH46</accession>
    <name>A0A2M9PH46_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00250</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000006">
        <property type="protein sequence ID" value="PJN96842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="13"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="264" mass="29440" checksum="0C39940FC4546EAF" modified="2018-04-25" version="1">MTAPARARARSLMELRNITLRFGGVTAIKDISFDIREGEIRAIIGPNGAGKSSMLNVINGFYRPQQGEIWFRGERRGALRPHQIAHQGIARTFQNIALFKGMSTLDNIMTGRFTHMKRGLLAQAVWKGPAEREEHANREIVEKIIDFLQIQSIRKTPVGRLPYGLQKRVELGRALAAEPKLLLLDEPMAGMNVEEKEDMSRFILDVNAEFGTTIALIEHDMGVVMDISDRVVVLDYGRKIGDGAPAEVRADPEVIEAYLGVAHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P469</accession>
    <name>A0A2M9P469_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004914">
        <property type="protein sequence ID" value="PJN92313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7461" checksum="4D911B90E68E0A11" modified="2018-04-25" version="1" fragment="single">ESFNAKLRDELLNGELFYSLAEGRTVLESWRRHYNTLRPHASLGYKPPAPAAISWPAAPPPAMATKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P485</accession>
    <name>A0A2M9P485_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004780">
        <property type="protein sequence ID" value="PJN92356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7599" checksum="50A4954871ABFF10" modified="2018-04-25" version="1" fragment="single">LLRLTRLREPKSEKAASPPLCSERFAIRSGVSGRRRAQPAVDVAKRGDRIGRQILVAHEDPLGMVAPQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B3</accession>
    <name>A0A2M9P4B3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004756">
        <property type="protein sequence ID" value="PJN92365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7363" checksum="E42C143E7503C459" modified="2018-04-25" version="1" fragment="single">MQTRLEIAKLHHEMDNVTMIYVTHDQVEAMTADGRALAAGAKGLIDPGLFPQDAGDTAYLAPQILVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C1</accession>
    <name>A0A2M9P4C1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004658">
        <property type="protein sequence ID" value="PJN92401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7802" checksum="75A1C9926043BB1A" modified="2018-04-25" version="1" fragment="single">LTQDPARNLILAPFFAERIESALPALRQVVAEGALRGHALTQDPARNLILAPFFAERIESALPALRQVVAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H5</accession>
    <name>A0A2M9P4H5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004504">
        <property type="protein sequence ID" value="PJN92442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7458" checksum="C36B975CD4C7129E" modified="2018-04-25" version="1" fragment="single">TRNLRFSTLKSWGLKLAKTSGFKKARIAVARKMAVILHAMWKMAVILHAMWKTNTPFRWSQEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I5</accession>
    <name>A0A2M9P4I5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">ATPase_AAA_core domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_29680</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004514">
        <property type="protein sequence ID" value="PJN92440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13304">
        <property type="entry name" value="AAA_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase_AAA_core" evidence="3">
        <location>
            <begin position="2"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8296" checksum="EBF32A233171D4F5" modified="2018-04-25" version="1" fragment="single">KKMSSGHAIIILTLTQLVAQVQEKSLVLMDEPESHLHPPLLSAFIRSLSRLLHRQNGVAIIATHSPVVLQEIPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J7</accession>
    <name>A0A2M9P4J7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004432">
        <property type="protein sequence ID" value="PJN92466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8411" checksum="428BCD7AE7F5E01D" modified="2018-04-25" version="1" fragment="single">AAVSAREALIDRPQFLITRIEIPDVSADLAEQIRETSLVTLPVNSAAVSAREALIDRPQFLITRIEIPDVSADLAEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N3</accession>
    <name>A0A2M9P4N3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Adenosine deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004324">
        <property type="protein sequence ID" value="PJN92502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5675" checksum="0D0880D151C219FF" modified="2018-04-25" version="1" fragment="single">METRFIPTAIRHFGPLRAEAAARTVVSSPHPRVTGFGMGGEERFGAPPWRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z4</accession>
    <name>A0A2M9P4Z4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Addiction module antidote protein, HigA family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">higA</name>
        <name evidence="3" type="ORF">CNY89_25135</name>
        <name evidence="2" type="ORF">CNY89_28270</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004012">
        <property type="protein sequence ID" value="PJN92599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003032">
        <property type="protein sequence ID" value="PJN92943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013430">
        <property type="entry name" value="Toxin_antidote_HigA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36924">
        <property type="entry name" value="PTHR36924"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02607">
        <property type="entry name" value="antidote_HigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7430" checksum="15FEA3E58B21D7A2" modified="2018-04-25" version="1" fragment="single">PHGLTVADGARVLGVTRQALNNLINGHAGVSPEMALRLAKAFNTEAEDWLHHQLVYDLAQARKRAASST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P548</accession>
    <name>A0A2M9P548_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003876">
        <property type="protein sequence ID" value="PJN92645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001900">
        <property type="entry name" value="RNase_II/R"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00773">
        <property type="entry name" value="RNB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNB" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10362" checksum="F9CC8608D535C8E9" modified="2018-04-25" version="1" fragment="single">RGNSTYFPDRVVPMLPESLSGDLCSLHEDVDRPCIAVRLTLTAEGHVRDHRFHRALMRSRQLHLLPRPRRPDAARIALRRPLLAARGRGPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P551</accession>
    <name>A0A2M9P551_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Benzoate 1,2-dioxygenase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27685</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003823">
        <property type="protein sequence ID" value="PJN92667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015879">
        <property type="entry name" value="Ring_hydroxy_dOase_asu_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001663">
        <property type="entry name" value="Rng_hydr_dOase-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756">
        <property type="entry name" value="PTHR43756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00848">
        <property type="entry name" value="Ring_hydroxyl_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ring_hydroxyl_A" evidence="3">
        <location>
            <begin position="11"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10493" checksum="4D92B4DD59D15195" modified="2018-04-25" version="1" fragment="single">KAGFIVNQTRNLCLYPNVFLMDQFSTQIRVVRPLGVDKTEVTIFCFAPKGESAEDRANRIRQYEDFFNVSGMGTSDDLEEFRACQTAYAGSVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P590</accession>
    <name>A0A2M9P590_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003768">
        <property type="protein sequence ID" value="PJN92685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10548" checksum="D6EFFB84DD79D005" modified="2018-04-25" version="1" fragment="single">KAVREWIAAVGARTAFIEPGSPWENGYCESFNAKLRDELLNGELFYSLAEARIVLESWRRHYNTLRPHASLGYKPPAPAAISWPAAPPPAMATKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M9</accession>
    <name>A0A2M9P5M9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Glucose-inhibited division protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_26200</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003357">
        <property type="protein sequence ID" value="PJN92825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002098">
        <property type="term" value="P:tRNA wobble uridine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004416">
        <property type="entry name" value="MnmG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806:SF0">
        <property type="entry name" value="PTHR11806:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="10">
        <location>
            <begin position="2"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN92825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11475" checksum="794542DCD82567D2" modified="2018-04-25" version="1" fragment="single">NHEVSGVVLGNGRTLPCCSVVLTTGTFLRGMIHIGEERTPAGRIGEAPAVRLADRVKDLGLPLGRLKTGTPPRLRKSSIAWGKLEMQAGDNDPAMLSFMSSTPVNPQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S7</accession>
    <name>A0A2M9P5S7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_21355</name>
        <name evidence="4" type="ORF">CNY89_21395</name>
        <name evidence="3" type="ORF">CNY89_25105</name>
        <name evidence="2" type="ORF">CNY89_25565</name>
        <name evidence="1" type="ORF">CNY89_25595</name>
    </gene>
    <organism evidence="1 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003157">
        <property type="protein sequence ID" value="PJN92892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003148">
        <property type="protein sequence ID" value="PJN92895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003022">
        <property type="protein sequence ID" value="PJN92946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002035">
        <property type="protein sequence ID" value="PJN93359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002029">
        <property type="protein sequence ID" value="PJN93366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6768" checksum="9A29027221C8B232" modified="2018-04-25" version="1" fragment="single">LTAGVPTKMHVLNLLHRLTCGNAPDLPEIDLPKALALVEEPQANVYRYDGLRSRTQGARDAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5W3</accession>
    <name>A0A2M9P5W3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003086">
        <property type="protein sequence ID" value="PJN92927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13059" checksum="A953A3C62B5E4CB8" modified="2018-04-25" version="1" fragment="single">LGRMEAAGQSIDQAPADGQRINHVQDWLSWVGVPDAWIFSGDEATVQQKQMDWVRAKLRYESGAVIGDDEARQEAATYFPRPGDRPERVKAKEESRKQAIEQMRLAAGRAAPGGVGAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P602</accession>
    <name>A0A2M9P602_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SGNH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24710</name>
        <name evidence="2" type="ORF">CNY89_24790</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002930">
        <property type="protein sequence ID" value="PJN92984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002912">
        <property type="protein sequence ID" value="PJN92994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043968">
        <property type="entry name" value="SGNH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19040">
        <property type="entry name" value="SGNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH" evidence="1">
        <location>
            <begin position="4"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7709" checksum="F6AC1C3E098C81B0" modified="2018-04-25" version="1" fragment="single">MVAPADACQFFVEGGDVAVFGDSHAITLSMGMARVLEPEGRGIWQFSASPCAPSYRLERDDPCTLWTNETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P648</accession>
    <name>A0A2M9P648_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002878">
        <property type="protein sequence ID" value="PJN93007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001761">
        <property type="entry name" value="Peripla_BP/Lac1_sug-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00532">
        <property type="entry name" value="Peripla_BP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_1" evidence="1">
        <location>
            <begin position="2"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14370" checksum="6C4C95254FD6467A" modified="2018-04-25" version="1" fragment="single">SRHGYELILSIVPEAREVETFESLARRRTVDGVMITSTRVQDSRIDLCQRLGLPFVSHGRDDRPEDSYSWVDVNNRRAFRRATELLLDLGHRRIGLINGFGFQSFARRREIGYAQALAGRGVALDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P654</accession>
    <name>A0A2M9P654_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002902">
        <property type="protein sequence ID" value="PJN92999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12206" checksum="9DBFBB1B99D7F5F2" modified="2018-04-25" version="1" fragment="single">VSDNGVGLEPVRFEAFCTTDTDYKITRGGKWVGRLLWLDVFEQIRLVSIFRDGERAFRRSFVFRLQSDEQITEEDLKEIEAAGSQTGTSITFCGLRGSGLPPFGGPDQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P689</accession>
    <name>A0A2M9P689_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002817">
        <property type="protein sequence ID" value="PJN93028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13963" checksum="8BDE98AC714603DB" modified="2018-04-25" version="1" fragment="single">PATPRTGRLRFRWRTSQLHPWSDAGAPLAVPAPEGIVDRSLFAMTRAEADDVLPIALVTFKVASTFSGSGEGAPCNNIRAQHGPVLLALEAFSEQTRTFTSKNWTGAQAGSQRLLAQLRHWANDVQTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A6</accession>
    <name>A0A2M9P6A6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002737">
        <property type="protein sequence ID" value="PJN93057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="75"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11582" checksum="735F8A0C545DB174" modified="2018-04-25" version="1" fragment="single">MGQPKFRRGFKTEGHALARELREELHVAAHDPLCPWKLADHLAVPLRRLTEFAGQGNVAYLTTGPGREEFSATVCYDGYAAFVIYNNTHAPVRQASNIAHELAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D4</accession>
    <name>A0A2M9P6D4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002675">
        <property type="protein sequence ID" value="PJN93079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="40"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="86"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="86"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13142" checksum="01ED57A0CBA70CE0" modified="2018-04-25" version="1" fragment="single">FLRNGFPALILAILGYLMHCLLISLATTRSVYEDRLRTGYVISFASAMVMFFYAGFFNASGVFFMMFMGGGAWFYDRSDENWKLNPRNRRVGRGGDPAPYRDRSRGGRAAQDKSVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F7</accession>
    <name>A0A2M9P6F7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002476">
        <property type="protein sequence ID" value="PJN93151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="9987" checksum="7729CF6CFD619A54" modified="2018-04-25" version="1" fragment="single">MEAARTPFNAALDRVVVAVDPPVTTGAEADECGHDLDQALPAGDQPGGDAGHGGPSCGRAGLGLAANKMHLARSFLETVTRAYEGTRLGRQELDGEM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G7</accession>
    <name>A0A2M9P6G7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002523">
        <property type="protein sequence ID" value="PJN93132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10665" checksum="3411477F538D2447" modified="2018-04-25" version="1" fragment="single">MNDVVAQFATEKTRRVWQLVWFLALQERQYLRRSRRKLWTKSALLGLILGLEYWIGFGFISDLLADGDSIVAAAFIALVVPVTAFAAHLLIQEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K0</accession>
    <name>A0A2M9P6K0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002417">
        <property type="protein sequence ID" value="PJN93176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="11"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15924" checksum="EE380E4A88B330AF" modified="2018-04-25" version="1" fragment="single">SWLRGSPFAFKATTNVTLSGVEVKGHLVNGYGEDTGIYVNTSKGFTLENSKITDFNLALNAWSNEDVTIKGNSFRGMNHDGLFFADMDGVTIEDNYIGDYNSDAPLALHKDSIQFYTGAGFAPSENIVIRGNTIVSSDVRHGVFIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P711</accession>
    <name>A0A2M9P711_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Restriction endonuclease subunit M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_20235</name>
        <name evidence="4" type="ORF">CNY89_21465</name>
    </gene>
    <organism evidence="4 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002052">
        <property type="protein sequence ID" value="PJN93354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001788">
        <property type="protein sequence ID" value="PJN93518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13066" checksum="43F81154A2A01E4C" modified="2018-04-25" version="1" fragment="single">LRRIVEASSNPGDIVLDCFCGSGTALVAADMLERKWIGVDNSPEALRTMLGRFEHGTKPMGDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLLSVEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P737</accession>
    <name>A0A2M9P737_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aldehyde-activating protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002054">
        <property type="protein sequence ID" value="PJN93352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6691" checksum="738048202064AF43" modified="2018-04-25" version="1" fragment="single">RSGDEIEVYLGSLDAPDQLTPTYESWIVRRESWLPRFPFTRRYDHDRDVTSRFEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P773</accession>
    <name>A0A2M9P773_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glyco_hydro_32N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002036">
        <property type="protein sequence ID" value="PJN93358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="2">
        <location>
            <begin position="8"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18020" checksum="8065D2B4BA7326A5" modified="2018-04-25" version="1" fragment="single">MLDIADPEFRDPKVFWQDNPGDDDYWVMAVARPLAREAEFYRSDDLKDWSYMSSFGPGGAVSGIWEVPDLIEMKVENTGETKWLLVQNLNPGGIAGGSAAQYFVGDWDGVTFTPDALPTPYGPGDAIWEDFETGFGRWTVTGAAFGTGPAAGSIGPQSPVVGFEGEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G0</accession>
    <name>A0A2M9P7G0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001828">
        <property type="protein sequence ID" value="PJN93491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9390" checksum="FD540E93F7B77204" modified="2018-04-25" version="1">MPLLSHLASADEEMLFARDGIELAYRDGLSLARGGVSPRVVRTGKQSGTLFIPGREPLHLAGNDQLTIFERWWSQPRKAVPTFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J4</accession>
    <name>A0A2M9P7J4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001783">
        <property type="protein sequence ID" value="PJN93521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="21317" checksum="A4F15E503FF34DE9" modified="2018-04-25" version="1" fragment="single">PFAFKGTTDITLSGVEVKGHLVNGYGKDTGLYVNTSKGFTLENSAITDFNLALNAWRDEDVRIEGNSFRGMNHDGLFFGEIDGITIEDNFLGDYNSDAPAALHKDNIQFYTGNGFGPSKDIVIRGNTLDSSDYRHGIFIFNEMNRDGNNSESARHKNILIEDNYIHTTNTHGITVSFADGVTVRNNTVVLNDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P9</accession>
    <name>A0A2M9P7P9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcription termination factor Rho</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19870</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the Rho family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001708">
        <property type="protein sequence ID" value="PJN93567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008186">
        <property type="term" value="F:ATP-dependent activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04459">
        <property type="entry name" value="Rho_CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011112">
        <property type="entry name" value="Rho_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036269">
        <property type="entry name" value="Rho_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011113">
        <property type="entry name" value="Rho_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004665">
        <property type="entry name" value="Term_rho"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46425">
        <property type="entry name" value="PTHR46425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07498">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07497">
        <property type="entry name" value="Rho_RNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00959">
        <property type="entry name" value="Rho_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68912">
        <property type="entry name" value="SSF68912"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51856">
        <property type="entry name" value="RHO_RNA_BD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Rho RNA-BD" evidence="4">
        <location>
            <begin position="57"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14980" checksum="3CE136BE541EDDB2" modified="2018-04-25" version="1" fragment="single">MDLSADFQQLSLAELKAKSPADLLRLAEELEIENASSMRKGDMMFAILKDMAEEGVEISGDGVLEVLLDGFGFMRSPEANYLAGPDDIYVSPSQIRKYSLRTGDTVEGVIRAPKEGERYFGLVKVSRINFEDPEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S2</accession>
    <name>A0A2M9P7S2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AAA_15 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001661">
        <property type="protein sequence ID" value="PJN93604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041685">
        <property type="entry name" value="AAA_15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13175">
        <property type="entry name" value="AAA_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_15" evidence="1">
        <location>
            <begin position="42"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="23354" checksum="07E4196C69605D56" modified="2018-04-25" version="1" fragment="single">ELLGAKEQETRNQLANRASAVVTSEIRRLWKDRQLKIRFNLDAEHTDTFVSDPNAIYDVEVNLDERSRGFKWFFSFYITFAADTKDDSASGAILLLDEPGLYLHARSQSDLLITSRKDFDNQILYTTHSPFMVPTHALETIRTVSIAEDKGTTVTNDPTGDARTLFPIQAALGYDLAQSLFIGPNNLVVEGVTDYWILSSVSAYLAEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P807</accession>
    <name>A0A2M9P807_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Chromosome partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001589">
        <property type="protein sequence ID" value="PJN93659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8782" checksum="F7846925C995A80B" modified="2018-04-25" version="1" fragment="single">VWTPTTENFFKRAPGGYLDTLWCELRGIEADSTEARTFAKAKKGEKCARLETLFQPETEMAADQRARVAAWLPPEMF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P839</accession>
    <name>A0A2M9P839_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001552">
        <property type="protein sequence ID" value="PJN93693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011703">
        <property type="entry name" value="ATPase_AAA-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07726">
        <property type="entry name" value="AAA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_3" evidence="1">
        <location>
            <begin position="7"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12940" checksum="99337618FE4F0023" modified="2018-04-25" version="1" fragment="single">MYYSEAGKGAFRFQPGPVFGNILLADEINRAPAKVQAALLEAMEERQVTVGQSTHPLPDLFIVMATQNPIEQEGTYPLPEAQTDRFLMKVLVDYPAPADELGVLRLLRDEERAALAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J2</accession>
    <name>A0A2M9P8J2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ald_Xan_dh_C2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18035</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001404">
        <property type="protein sequence ID" value="PJN93848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C2" evidence="2">
        <location>
            <begin position="36"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="28554" checksum="15E72D3BDC5204A9" modified="2018-04-25" version="1" fragment="single">SCCTTPASSPPSPIRRWRGSSGSTPPGWRSAPWLPNLAHAPMEPLNCTIEPVAEGVVLHDACQFPALAHPTVAGILGLDPARVEIRTLYAGGSFGRRASPSSDYHVEAAQAFALTDRTRPVKLVWSREDDIRGGHYRPAAAHRVRIGLDASGGIVAWDHRVAGQSIFKGTAMEAFVVKEGIDHTSIEGIPDTPYAIPLMHVGLTDAEPSVTVLWWRSVGHSHTAFVMESMMDLAAAAAGQDPVAFRLKHLAGDGPDQVRLAATLRQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P1</accession>
    <name>A0A2M9P8P1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DsbE family thiol:disulfide interchange protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17715</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the thioredoxin family. DsbE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001363">
        <property type="protein sequence ID" value="PJN93901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015036">
        <property type="term" value="F:disulfide oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03010">
        <property type="entry name" value="TlpA_like_DsbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004799">
        <property type="entry name" value="Periplasmic_diS_OxRdtase_DsbE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00385">
        <property type="entry name" value="dsbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="4" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="1"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14147" checksum="2FBCD2371F1F41DD" modified="2018-04-25" version="1">MQFCLPRPTDADLRAGQITLVNFWASWCGPCRIEHPVLTELSAAGASVIGVNYKDKPEQALGFLEDLGDPYKAVAADTAGRIGLDWGIYGVPETFVIDGKGVILLRHPGPLTPQIVAERIAPLLGAGGAGAKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y7</accession>
    <name>A0A2M9P8Y7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001272">
        <property type="protein sequence ID" value="PJN94008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13782" checksum="B6196C14CA417EB5" modified="2018-04-25" version="1">MEEELKPRAEEYGLRLERATALWRAFERCHAQDAEMLIRAAFDQLGAGTPRPTIRRVMVEAKEWVEEATPYELKAYASVCAEAMTPELRAKFIFYLNQRFGPSFSASAGNGNPIENPIASDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B9</accession>
    <name>A0A2M9P9B9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gluconate:proton symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16295</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001176">
        <property type="protein sequence ID" value="PJN94138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015128">
        <property type="term" value="F:gluconate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003474">
        <property type="entry name" value="Glcn_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30354">
        <property type="entry name" value="PTHR30354"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="76"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="158"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="239"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="26654" checksum="F16FBFA9B9052063" modified="2018-04-25" version="1">MRAAAAARRGEGFGTHPRTDADSALAEDADLPGIWLALTPVIAVIGINAVLTYLVIPNMDTAFLAEARYGATTIDAVRGIWAIIASLVVSILLAIGLNLKRLSDLKETVNKGTMGSLLPVFNTSSEVGYGAVIASLPAFAVIRDAVLNIAPQNPLISLAVAVNVLAGITGSASGGMSIALQTLGAQFAEMAQAAGISEGLMHRVAALSSGGFDALPHNGAVITLLAICGLTHKQSYPDIFVVAVAIPVFATVVVVALGSMGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C7</accession>
    <name>A0A2M9P9C7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001177">
        <property type="protein sequence ID" value="PJN94135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11096" checksum="805AED5B515F2A71" modified="2018-04-25" version="1" fragment="single">HRHALMTMIAYAFLQSRRLKAAGREKKSPRTAPRPTMPAVRQAILDASRDHYQHAALIVKGSSQSAVQQICQSSARLRTHNQKMTVAAMQMALMKAWAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G6</accession>
    <name>A0A2M9P9G6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YceI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001141">
        <property type="protein sequence ID" value="PJN94188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007372">
        <property type="entry name" value="Lipid/polyisoprenoid-bd_YceI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036761">
        <property type="entry name" value="TTHA0802/YceI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04264">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101874">
        <property type="entry name" value="SSF101874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YceI" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7420" checksum="E29A718EBCB84EC9" modified="2018-04-25" version="1">MTLRGVTKPLALDAKVFRYGPDPADPGRFQAGFDLTGSIDRTEFGSTGGLPEVPARLDLRIRLVMSAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L6</accession>
    <name>A0A2M9P9L6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001125">
        <property type="protein sequence ID" value="PJN94209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041638">
        <property type="entry name" value="BaeRF_family11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18855">
        <property type="entry name" value="baeRF_family11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="292" mass="32235" checksum="153C3E82C1E1F437" modified="2018-04-25" version="1" fragment="single">MLHIDLPTRAQIEKLVAHRAQPTVSIYLHTTPLTQDAQADRIELKNLLKTAVAEMEAFDTPKRSIWPIEESITHLIDDDAFWTHQANSLAIFASGDRIDTFRLPNRLTSMVEVSDRVHLKPLLRAVTFPNTAYVLAIGAGSVRLIEVSADLAPEEVGVPGLPKDFNQALGKRSHTENRKDMASGESTSESALLNRYARVVDQALRPFLKGHERPLIVAAAEPMASIYRAVSTYPHTAEQTISGSFDHTPVHEIAASAREVLDAIYARQVADFAELYATREPQGRATNDVAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R3</accession>
    <name>A0A2M9P9R3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nickel transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15610</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001094">
        <property type="protein sequence ID" value="PJN94251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014955152" evidence="4">
        <location>
            <begin position="20"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="5">
        <location>
            <begin position="19"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="26683" checksum="3D04650047C87E99" modified="2018-04-25" version="1">MNRFLGAAVLCIATTPALALDICVEGAYPPFSETAPDGSIIGFDIDIANALCAEMGESCTMVKVDWDGIIPALLEKKCDAIIASMSATDERKQVIEFTGKYYIAPNQFAGRKDAGLEATPEGLEGKRVGVQRGTIHQAYMEKHFPGVEIVAYGSMDEAQLDLTSGRIDAIIGDGIQIDAGLLKSPQGADYAFFGEPVYDPAIHGTGASIGVRKDDTALRDKLSAAILGIREKGVYGEISERYFGMDIYGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T1</accession>
    <name>A0A2M9P9T1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Malate synthase G</fullName>
            <ecNumber evidence="10">2.3.3.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_15450</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + glyoxylate + H2O = (S)-malate + CoA + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18181"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="EC" id="2.3.3.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.9" evidence="10"/>
    <dbReference type="EMBL" id="PHNO01001075">
        <property type="protein sequence ID" value="PJN94279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004474">
        <property type="term" value="F:malate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006097">
        <property type="term" value="P:glyoxylate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1220.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044856">
        <property type="entry name" value="Malate_synth_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011076">
        <property type="entry name" value="Malate_synth_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001465">
        <property type="entry name" value="Malate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006253">
        <property type="entry name" value="Malate_synthG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42739">
        <property type="entry name" value="PTHR42739"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01274">
        <property type="entry name" value="Malate_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51645">
        <property type="entry name" value="SSF51645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0329">Glyoxylate bypass</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0558">Oxidation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023097"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="20319" checksum="20E1E58D5CE97F92" modified="2018-04-25" version="1" fragment="single">DRVPQGLVGPVVALFRHEDDRERRRVLDLAFLQLPILDALLTPPIAIAPNSRDAVLRELDNSAQGILGYVVRWVDQGIGCSKVPDIDDVALMEDRATCRISAQYLANWLVQGVVTEAEVEDALRRMAAKVDGQNAGDPAYIPMAPGFDGPAFRAARDLVLEGASQPSGYTEPLLHARRREAKALRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X5</accession>
    <name>A0A2M9P9X5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SnoaL-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001041">
        <property type="protein sequence ID" value="PJN94334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="9"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6730" checksum="AC0E73BBB954DEA9" modified="2018-04-25" version="1">MTLPPPIASFFDDRNARDFAAAASAFTPTAVVHDEGGDHVGPDAIRAWMEETTARYDHRTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z5</accession>
    <name>A0A2M9P9Z5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tnp_DDE_dom domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001024">
        <property type="protein sequence ID" value="PJN94366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13701">
        <property type="entry name" value="DDE_Tnp_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="2"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11567" checksum="759D17BF53A13033" modified="2018-04-25" version="1" fragment="single">MERRVDVAGRLAACIDDPRDPTRTVHSVADILRFRMLMMASGYEDGIDTNALRADPVFKMALERLPGERDLCSQSTVSRGRHIERTQIYANGPRPVANGNHLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB0</accession>
    <name>A0A2M9PAB0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">UvrABC system protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_14225</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Forms a heterotetramer with UvrA during the search for lesions. Interacts with UvrC in an incision complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the UvrB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000948">
        <property type="protein sequence ID" value="PJN94485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036876">
        <property type="entry name" value="UVR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004807">
        <property type="entry name" value="UvrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024759">
        <property type="entry name" value="UvrB_YAD/RRR_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24029">
        <property type="entry name" value="PTHR24029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12344">
        <property type="entry name" value="UvrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46600">
        <property type="entry name" value="SSF46600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0228">DNA excision</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="12">
        <location>
            <begin position="49"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="11">
        <location>
            <begin position="242"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="295"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00025647"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00026033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="35725" checksum="4C12DE4BA1A0BF9C" modified="2018-04-25" version="1" fragment="single">DAMRPQSVFVSATPAAWEIDQAGGVFTEQVIRPTGLLDPPVEIRPVSMQVDDLLDEVRKVAAQGNRVLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRVTGSMERALAETNRRREKQIAYNLAHGVTPETIRKNVADVLDGLFQADTDMSRVTATVDKPMVGSNLAAHLDALRKQMLKAAENLEFEEAARLRDEVKRLEAVELAVADDPLARQSAIEAEVDAAVKPRSQAGRGGTRSYRGKSKGKMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD2</accession>
    <name>A0A2M9PAD2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14120</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the O-antigen polymerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000938">
        <property type="protein sequence ID" value="PJN94503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007016">
        <property type="entry name" value="O-antigen_ligase-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04932">
        <property type="entry name" value="Wzy_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13690" checksum="F5EDC22B3C215DBB" modified="2018-04-25" version="1" fragment="single">DHWPAGAGYGSFWNVGPDSPVFAYARSGAWVTKITSSHNGYLEVAAQIGVPGLVIAVFCLFLHPLGRLLTDPGHKARGALLLALLAFCAGQNLTEATMLDRDNFVQFCLMWTIAAICQRPRSPSGTAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE3</accession>
    <name>A0A2M9PAE3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GNAT family N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000931">
        <property type="protein sequence ID" value="PJN94515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="5415" checksum="3AA9771A9D76DE31" modified="2018-04-25" version="1" fragment="single">LYAAVLDANAAGRRFWEREGFRAVLTTEPRRYGDRVHVAHRMERTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE5</accession>
    <name>A0A2M9PAE5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">8-oxo-dGTP diphosphatase MutT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000936">
        <property type="protein sequence ID" value="PJN94508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029119">
        <property type="entry name" value="MutY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14815">
        <property type="entry name" value="NUDIX_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="2">
        <location>
            <begin position="2"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14731" checksum="9CED5FF62F7C3D83" modified="2018-04-25" version="1">MKLLLVVAVALVDPDGRVLLAQRPEGKAMAGLWEFPGGKVEPGESPEAALMRELHEELGIETWSSCLAPLSFASHAYEAFHLLMPLYVCRKWAGEPKPREHAALRWVRPRDMGRYPMPPADLPLLPALRDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI8</accession>
    <name>A0A2M9PAI8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoadipate enol-lactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000909">
        <property type="protein sequence ID" value="PJN94556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3589" checksum="BA84AD8C9189A248" modified="2018-04-25" version="1" fragment="single">RFALIRGAGHMPPIERPEALAGLIAGFLDEIDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB69</accession>
    <name>A0A2M9PB69_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PTA_PTB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12410</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphate acetyltransferase and butyryltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000773">
        <property type="protein sequence ID" value="PJN94786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10750">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10950">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012147">
        <property type="entry name" value="P_Ac_Bu_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042113">
        <property type="entry name" value="P_AcTrfase_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042112">
        <property type="entry name" value="P_AcTrfase_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002505">
        <property type="entry name" value="PTA_PTB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01515">
        <property type="entry name" value="PTA_PTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000428">
        <property type="entry name" value="P_Ac_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PTA_PTB" evidence="2">
        <location>
            <begin position="26"/>
            <end position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="305" mass="33178" checksum="52DD60F39FA3AF9F" modified="2018-04-25" version="1">MKITPLTPEFSVSPQIRPEDVAEIAAKIAALGLRLKEDRDFDVASFDDAELISRSADQYYALRKRHGVTRDHATAEMRRNATLIGAMLVRDGQADGMLCGVTGAFDSHLRYVQEVIGLREDARDLAAMHLLMLPKQTVFICDTYINYDPSAEDLAEMAVLASETVRAFGFEPRIAVLSHSSFGSANTPSARKMRHALELIRARAPGLEVEGEMHADHALSPRLLARAMPDSTLTGEANLLLMPNLDAANITFNALKIVAGEGVTVGPILMGAARPVHILTPTSTVRRLVNMTALAAVDSVRLRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB4</accession>
    <name>A0A2M9PBB4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000757">
        <property type="protein sequence ID" value="PJN94815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038725">
        <property type="entry name" value="YdaG_split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16242">
        <property type="entry name" value="Pyrid_ox_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyrid_ox_like" evidence="1">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12997" checksum="87E16EDE3EB4A92C" modified="2018-04-25" version="1" fragment="single">YILTDTSGEKHEQIVRFPQVSLAFADPQANDYVVINGIATVSRDREKIKDVWRFSDEAFWEAPDDPNLRLISVEPRDAELWDGSNVVVTGAKMIAERFLGAKVRLVENRKVDHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC8</accession>
    <name>A0A2M9PBC8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ammonium transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_12115</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the ammonia transporter channel (TC 1.A.11.2) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000742">
        <property type="protein sequence ID" value="PJN94835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008519">
        <property type="term" value="F:ammonium transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3430.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029020">
        <property type="entry name" value="Ammonium/urea_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001905">
        <property type="entry name" value="Ammonium_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018047">
        <property type="entry name" value="Ammonium_transpt_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024041">
        <property type="entry name" value="NH4_transpt_AmtB-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43029">
        <property type="entry name" value="PTHR43029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00909">
        <property type="entry name" value="Ammonium_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00836">
        <property type="entry name" value="amt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01219">
        <property type="entry name" value="AMMONIUM_TRANSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0924">Ammonia transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="67"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="159"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="194"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="228"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="260"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="288"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="311"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="345"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="385"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="domain" description="Ammonium_transp" evidence="9">
        <location>
            <begin position="34"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="438" mass="45768" checksum="FF3A2DB8BD8951B4" modified="2018-04-25" version="1">MLAKTGESSSFFTAGTVEAVPDIVEPLMDKGDVAWMLLSTILVLLMILPGLGLFYGGLVRAKNMLSVLMQTFIVACVMMIAWMIYGYSLALNPGAGLDTYIGGFSRLFLAGVTPDSMVATFTDGVVIPEYVFICFQMTFAAITPALIVGGFAERMKFSAVLVFCLLWSALVYLPVAHMVWYAEGLLFTMGALDFAGGTVVHINAGIAALVGAIVLGPRIGHMKEPMPPHSLVMTYIGGALLWVGWFGFNAGSNLEANGGAALAMINTFVATAGAALSWLFIEWATKHHASMLGGMSGAIAGLVAVTPAAGLIGPVGAIALGAVAGVVCFYFCTTIKSAFGYDDSLDVFGIHGVGGILGSIGTGVLVSPALGGVGVDGYSMASQVWVQFVGVAITVVWCGVVSFILYKLVDLTIGLRVSPEVEREGLDLAEHGERAYVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ1</accession>
    <name>A0A2M9PBJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11685</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000705">
        <property type="protein sequence ID" value="PJN94901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="66"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="17084" checksum="1CE51321A9803CE2" modified="2018-04-25" version="1" fragment="single">MRANRLVPAVVLGLYLVFQMLPIYWIVRMSFMTPNTIMSRSDFLPVDATLDNYRTIFSDPTWYMSYVNSLTYVAINMVISLAVALPAAYAFSRYRFLGDKHVFFWLFTNRMAPAAVFLLPFFQLYSAVGLFDTPWAVALAHTLFVVPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM6</accession>
    <name>A0A2M9PBM6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11465</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000686">
        <property type="protein sequence ID" value="PJN94938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014832087" evidence="3">
        <location>
            <begin position="23"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="26"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10302" checksum="F7E3DDFABD0C16E9" modified="2018-04-25" version="1">MTVLSVLVALLTAALAVTHAGAPESVPLYVVASGAVMAGCAFLGRGVYTFLRMFLAGYAITFAAFAVGFLIFAHGGSPPGRPTGCRRSSPSPSSPSPSPSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ2</accession>
    <name>A0A2M9PBQ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Lipid II flippase MurJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_11280</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000671">
        <property type="protein sequence ID" value="PJN94967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004268">
        <property type="entry name" value="MurJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03023">
        <property type="entry name" value="MurJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01806">
        <property type="entry name" value="VIRFACTRMVIN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0133">Cell shape</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6798" checksum="AF0DA42E0017A580" modified="2018-04-25" version="1" fragment="single">MNRPIRLLPALLTVGGWTMISRVLGLVRDMMMAAMLGAGPAAQAFLIAFSLPNMFRRFFAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV4</accession>
    <name>A0A2M9PBV4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Plasmid stabilization protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10950</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RelE toxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000643">
        <property type="protein sequence ID" value="PJN95027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2310.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007712">
        <property type="entry name" value="RelE/ParE_toxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035093">
        <property type="entry name" value="RelE/ParE_toxin_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05016">
        <property type="entry name" value="ParE_toxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143011">
        <property type="entry name" value="SSF143011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="10267" checksum="461FC16629DC0823" modified="2018-04-25" version="1">MAYRLDYAPAARKAIRAIRDVKLKRRIETALLALREEPRPSGAKRLVGLGGTLRIRVGDWRILYEVREQEVVVLVIRIGPRGEVYERVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC23</accession>
    <name>A0A2M9PC23_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000615">
        <property type="protein sequence ID" value="PJN95083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="286" mass="31321" checksum="47FA19E1023C500F" modified="2018-04-25" version="1">MTPGKAEALAAPYGARVFHDYQALLADPGIDAVYIPLPNTEHVAWTARCLDAGKHVLCEKPIALRAEEIDGLIALRDRTGLLAAEAFMVTHHPQWIKARDLIAEGAIGTLRSVQGAFSFHNVDPSNIRNKSDMGGGALRDIGVYPCVTTRFATGAEPVAAKAEIDWQDGIDASAWARLDFPEFRLDFYVSMRLAPRQVMTFHGDRGWLSLTAPFNAGSYGDPVIEIRNEMNATQTLRFPRSDQYKAQIDAFNATVLDGTPFPCPLEFSRGNQVAIDMIYAAAGRGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC49</accession>
    <name>A0A2M9PC49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glutamine synthetase</fullName>
            <ecNumber evidence="7">6.3.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">glnA</name>
        <name evidence="7" type="ORF">CNY89_10295</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the glutamine synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.1.2" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000588">
        <property type="protein sequence ID" value="PJN95135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008147">
        <property type="entry name" value="Gln_synt_b-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027302">
        <property type="entry name" value="Gln_synth_N_conserv_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03951">
        <property type="entry name" value="Gln-synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00180">
        <property type="entry name" value="GLNA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln_synt_b-grasp" evidence="6">
        <location>
            <begin position="16"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="Gln-synt_C" evidence="5">
        <location>
            <begin position="104"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="24322" checksum="A0AAA6C6E2971C49" modified="2018-04-25" version="1" fragment="single">MSDKESILKSLKEDDIPYVDIRFTDPKGKLQHVTVCSDLVDEDFLDDGFMFDGSSIAGWKGIEESDMKLIVDVESAYIDPFFAEKTLCVHCSVVEPDTGEPYDRDPRGTAEKAEAYLVASGVGDKAYFGPEAEFFVFDDVRFANKINKVSFEIDAVDASWNTDTEYESGNMGHRPGLKGGYFPVPPVDSMQDIRGEMLSTMKRIGMKVDKHHHEVASP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD1</accession>
    <name>A0A2M9PCD1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cell wall polymerase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Peptidoglycan polymerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_10050</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000571">
        <property type="protein sequence ID" value="PJN95174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008955">
        <property type="term" value="F:peptidoglycan glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001182">
        <property type="entry name" value="FtsW/RodA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30474">
        <property type="entry name" value="PTHR30474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01098">
        <property type="entry name" value="FTSW_RODA_SPOVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="9" id="KW-0132">Cell division</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="92"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="190"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="283"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="316"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="349"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="386" mass="41052" checksum="FC6A5D10A0E22AFF" modified="2018-04-25" version="1">MTEMVYGAVPTRPGEPILPHWWRTIDRWSLAAIIGLFLAGMLLGLAASPPLAVKNGLAPFHYVIRQAAFGVIAIGTLLVISMMDPQTIRRGASLGFFCSVVALALLPVFGTDFGKGAMRWYSLGFISVQPSEFLKPTFAVFAAWLMAASYDPSGPPGRMLSFVTAATLTLVLALQPDFGQAGLIIACWSLMYFTAGAPIMLLAGVGGAVMAGGWFAYHNSEHVARRIDGFLASDVDPRTQIGYATNAIQEGGFLGVGVGNGQVKWILPDAHTDFIIAVAAEEFGLILCVVIMTLYMTVVVRSLLRLVGERDPFIRLAGTGLACLLGMQALINMGVAVRLLPAKGMTLPLISYGGSSLIAACAGLGMLLAMTRKRPQNDIDDILGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE3</accession>
    <name>A0A2M9PCE3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PTS fructose transporter subunit IIA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000549">
        <property type="protein sequence ID" value="PJN95215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.510">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004701">
        <property type="entry name" value="PTS_EIIA_man-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036662">
        <property type="entry name" value="PTS_EIIA_man-typ_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03610">
        <property type="entry name" value="EIIA-man"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53062">
        <property type="entry name" value="SSF53062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51096">
        <property type="entry name" value="PTS_EIIA_TYPE_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PTS EIIA type-4" evidence="2">
        <location>
            <begin position="1"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="14488" checksum="C27F52D42F692798" modified="2018-04-25" version="1">MIGIVIVAHGGLAREYLAAMEHVVGPQPGAVAVAIGAEDNSAAKQDEIDAAIRAVDTGDGVVVVTDMFGGTPSNLAMEACESCRASGRSVIYGANMPLLIKLAQMRRHPLREAVASALTAGRKYINSVDGFGPDRLSIAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH3</accession>
    <name>A0A2M9PCH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000536">
        <property type="protein sequence ID" value="PJN95241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7795" checksum="1A3A2CAE8DE0B0D5" modified="2018-04-25" version="1" fragment="single">MTAKKPRPDVLIYEFTCERHVYAGKRVVTAATAHLRPGDAGTGPLPCGYSGSGKVWGNVLRKYGKPALHWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH9</accession>
    <name>A0A2M9PCH9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000535">
        <property type="protein sequence ID" value="PJN95245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8945" checksum="068F3592659CFBFF" modified="2018-04-25" version="1">MSDRLPLLQRLVFSIPVLGWMLKDVIYGDRDNIWYFLFTLLTVWVLAMFAFGYPAFIIPVLAIVPVVFFMIFLISLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM7</accession>
    <name>A0A2M9PCM7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1476 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000510">
        <property type="protein sequence ID" value="PJN95299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.790.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009945">
        <property type="entry name" value="ATPase_inh_sub_z"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038293">
        <property type="entry name" value="DUF1476_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07345">
        <property type="entry name" value="DUF1476"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031780">
        <property type="entry name" value="UCP031780"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11971" checksum="A021396B98A3D8AA" modified="2018-04-25" version="1">MSDSFKDREKGFENQFAHDLELQFRANARRCRLVGHWAAGLLGKTGEDKVQYALDVVRADFREAGHEDVVSKLRADLDGLADEATIRAKMAEFLELSKQQLMTEAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP7</accession>
    <name>A0A2M9PCP7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RP-C_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000509">
        <property type="protein sequence ID" value="PJN95303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005090">
        <property type="entry name" value="Rep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021760">
        <property type="entry name" value="RP-C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03428">
        <property type="entry name" value="RP-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11800">
        <property type="entry name" value="RP-C_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RP-C_C" evidence="1">
        <location>
            <begin position="267"/>
            <end position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="374" mass="40695" checksum="43F6EB05C6F0CA79" modified="2018-04-25" version="1">MEKEQSVEPRLPQGELHRVLRLAAIAHGLPDAVLVTGHALLRYVPRDADRPISPARVQDLADERGCDPRTIRGHIRRLEAYGLVVDRSAGGGRRMIQRRRGRIVVLQGIDFSPMLVATDRIEHAALEAEVELDERRRLAARVSELKRQLRGLVASGGDMAPRATAALDVCPSRHRGLPLRDLAALVGRLEAAIRVLTDDGEDAGGRIFSSDRDDEIVRPYTTEKDEISVCRPRRSRNDAGADALRHITLDVLAAALPFDWRARIERSGGAVSWASLTAAAYERAGEIGITAAIWAEAQAGLGRAGAAVLVLLADAGSIERQGSIRYPSAWVRAMAARAEDGPLRLSRNLFGLLHRTRGADGPCPTPVVPSHFQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ9</accession>
    <name>A0A2M9PCQ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000495">
        <property type="protein sequence ID" value="PJN95337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9486" checksum="2EACFBDD97ED0B29" modified="2018-04-25" version="1" fragment="single">MSYLDNLRLFIRVYELRNLSTAGHDLRLTPAVASARLKALEAHLGVRLFNRTTRKLTPTEQGAALYEGALKVFEALTEAESAVAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ4</accession>
    <name>A0A2M9PCZ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L5</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplE</name>
        <name evidence="9" type="ORF">CNY89_08810</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA and the P site tRNA. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000475">
        <property type="protein sequence ID" value="PJN95382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01333_B">
        <property type="entry name" value="Ribosomal_L5_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002132">
        <property type="entry name" value="Ribosomal_L5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020930">
        <property type="entry name" value="Ribosomal_L5_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031309">
        <property type="entry name" value="Ribosomal_L5_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020929">
        <property type="entry name" value="Ribosomal_L5_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022803">
        <property type="entry name" value="Ribosomal_L5_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031310">
        <property type="entry name" value="Ribosomal_L5_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11994">
        <property type="entry name" value="PTHR11994"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00281">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00673">
        <property type="entry name" value="Ribosomal_L5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002161">
        <property type="entry name" value="Ribosomal_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55282">
        <property type="entry name" value="SSF55282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00358">
        <property type="entry name" value="RIBOSOMAL_L5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L5" evidence="7">
        <location>
            <begin position="31"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L5_C" evidence="8">
        <location>
            <begin position="91"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003930"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="20819" checksum="C16A8540BF9172C3" modified="2018-04-25" version="1">MLDETTYVPRLKAVYAETVRPALKEEFGYKNDMQIPRLDKIVLNMGIGEATSDSKKVRSAEADLTLIAGQKPVVTKAKKSIAGFKVREEMPLGVKVTLRGARMYEFLDRLITVALPRVRDFRGVNPKSFDSRGNYAMGLKEHIVFPEISFDKVDQVWGMDIVICTTAKTDAEAKALLKAFNMPFTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD06</accession>
    <name>A0A2M9PD06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08685</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000465">
        <property type="protein sequence ID" value="PJN95404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045861">
        <property type="entry name" value="CorA_cytoplasmic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143865">
        <property type="entry name" value="SSF143865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17382" checksum="7BE04CF64AD18871" modified="2018-04-25" version="1">MEHSRGFENVVPPEPGVVAAGVYLEGRRVGDIPIDGAAAWAGKDGHVVWIGLLEPSHELLLRVQREFGLHDLAIEDAEHAHARPKVEQYGDALFIVARTAQLIDGRVAFGETHVFIGRGFIVSVRHGASTSYGRVRQHWESCPSVLAKGQDFILCARLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD16</accession>
    <name>A0A2M9PD16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08580</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000458">
        <property type="protein sequence ID" value="PJN95418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13207" checksum="10F070853296C191" modified="2018-04-25" version="1" fragment="single">GLSPSPCLARVRALEKAGVIRRYVALVEPAALGLGVHVFIQVTLERQVDRNLAEFERRMAGFPQVMECYLMTGDSDYLLRVLVRDMAALQDFIVDELTRIPGVANIRSACATRPASTTST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD62</accession>
    <name>A0A2M9PD62_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron-regulated protein FrpC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000436">
        <property type="protein sequence ID" value="PJN95476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18032" checksum="79C550893969ACCC" modified="2018-04-25" version="1" fragment="single">NGTSRPDGIDGFRGNDLLYGNGGDDFLFGGTGADTLRGGNGHDVLVGWFGEDVLIGGRGDDAFVFTATDQSTFERFDRILFGDRAAPMQGAGEPGGDVIDLSEIDANTALAGNQAFRFGQTGIQGLSLYNRGTDTVVRANTDADAAFEFYLRIQDGAVTAQDYVRADFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC5</accession>
    <name>A0A2M9PDC5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000415">
        <property type="protein sequence ID" value="PJN95524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13361" checksum="685AD714EE0F6437" modified="2018-04-25" version="1" fragment="single">AELLDAAAPLRREAVQPHAAPPGQHMLRMAVALAHGRPDTIRMTGHWRLPDRPVIGAGAFLFLGQDGPRPQGSIPGEPSGFAGSISDPAAPVPSFDHGETRRVAPEVGEVMAVGGTRAETLPVRGRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH9</accession>
    <name>A0A2M9PDH9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">Uracil phosphoribosyltransferase</fullName>
            <ecNumber evidence="3 11">2.4.2.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">UMP pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">UPRTase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">upp</name>
        <name evidence="12" type="ORF">CNY89_07475</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>diphosphate + UMP = 5-phospho-alpha-D-ribose 1-diphosphate + uracil</text>
            <dbReference type="Rhea" id="RHEA:13017"/>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Binds 1 Mg(2+) ion per subunit. The magnesium is bound as Mg-PRPP.</text>
    </comment>
    <comment type="activity regulation">
        <text evidence="11">Allosterically activated by GTP.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 11">Pyrimidine metabolism; UMP biosynthesis via salvage pathway; UMP from uracil: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the UPRTase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.9" evidence="3 11"/>
    <dbReference type="EMBL" id="PHNO01000378">
        <property type="protein sequence ID" value="PJN95607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00574">
        <property type="reaction ID" value="UER00636"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004845">
        <property type="term" value="F:uracil phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044206">
        <property type="term" value="P:UMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006223">
        <property type="term" value="P:uracil salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01218_B">
        <property type="entry name" value="Upp_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034332">
        <property type="entry name" value="Upp_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005765">
        <property type="entry name" value="Ura_phspho_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01091">
        <property type="entry name" value="upp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="5 11 12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9 11" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="8 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 11 12" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="11">
        <location>
            <begin position="130"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="region of interest" description="Uracil binding" evidence="11">
        <location>
            <begin position="198"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="193"/>
        </location>
        <ligand>
            <name>uracil</name>
            <dbReference type="ChEBI" id="CHEBI:17568"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22705" checksum="F27D01D032B10784" modified="2018-04-25" version="1">MTLTIVDHPLVQHKLTLMRERDTSTAGFRQLLREISLLLAYEVTRDLPLTTRTIETPLTEMEAPVLRGKKLALISILRAGNGLLDGVLELIPSARVGYIGLYRDEATLQPVQYYSKVPADLDARVTIVLDPMLATGNSSAAAVTLLKEAGATDIRFLCLLAAPEGVKRMQEAHPEVPIITASLDKRLNDKGYIVPGLGDAGDRMFGTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI9</accession>
    <name>A0A2M9PDI9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Aspartate carbamoyltransferase</fullName>
            <ecNumber evidence="6">2.1.3.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Aspartate transcarbamylase</fullName>
            <shortName evidence="6">ATCase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">pyrB</name>
        <name evidence="10" type="ORF">CNY89_07640</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>carbamoyl phosphate + L-aspartate = H(+) + N-carbamoyl-L-aspartate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:20013"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:32814"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="EC" id="2.1.3.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.3.2" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000390">
        <property type="protein sequence ID" value="PJN95578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00116"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004070">
        <property type="term" value="F:aspartate carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1370">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00001">
        <property type="entry name" value="Asp_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006132">
        <property type="entry name" value="Asp/Orn_carbamoyltranf_P-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006130">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036901">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002082">
        <property type="entry name" value="Asp_carbamoyltransf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006131">
        <property type="entry name" value="Asp_carbamoyltransf_Asp/Orn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11405:SF16">
        <property type="entry name" value="PTHR11405:SF16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00185">
        <property type="entry name" value="OTCace"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02729">
        <property type="entry name" value="OTCace_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00100">
        <property type="entry name" value="AOTCASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53671">
        <property type="entry name" value="SSF53671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00670">
        <property type="entry name" value="asp_carb_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00097">
        <property type="entry name" value="CARBAMOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OTCace_N" evidence="9">
        <location>
            <begin position="7"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="OTCace" evidence="8">
        <location>
            <begin position="158"/>
            <end position="303"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008896"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF02729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="34459" checksum="4B3023896AE02675" modified="2018-04-25" version="1">MPLFAHRHLLGIEGLSRDDIETVLDLADTYVAFNRQPEKRGAALRGLTQINMFFENSTRTQASFELAGKRLGADVMNMAVAQSSVKKGETLIDTALTLNAMNPDLLVVRHGSSGAVNLLASKVNCAVLNAGDGRHEHPTQALLDALTIRRRKGTLSRLTVAICGDIAHSRVARSNILLLGRMENRIRLIGPPTLMPAGVDRMGVEVFQNMARGLEGADVVMMLRLQRERMDGALIPSMREYYHRFGLDSEKLAHAKPDAIVMHPGPMNRGVEIDGTLADDINRSVIQEQVEMGVAVRMAAMDLLARNHRARIAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ5</accession>
    <name>A0A2M9PDJ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrate reductase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">narH</name>
        <name evidence="2" type="ORF">CNY89_07405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000374">
        <property type="protein sequence ID" value="PJN95621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009325">
        <property type="term" value="C:nitrate reductase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008940">
        <property type="term" value="F:nitrate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042126">
        <property type="term" value="P:nitrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10557">
        <property type="entry name" value="NarH_beta-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029263">
        <property type="entry name" value="Nitr_red_bet_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038262">
        <property type="entry name" value="Nitr_red_bet_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006547">
        <property type="entry name" value="NO3_Rdtase_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14711">
        <property type="entry name" value="Nitr_red_bet_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01660">
        <property type="entry name" value="narH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="7"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="174"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="207"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="509" mass="57707" checksum="37408710EEDBF5D6" modified="2018-04-25" version="1">MKIRAQIGKVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGLGYPKDWENQKRWNGGWERNSRGHLQPRQGAKWRILANIFANPDLPEIDDYYEPFDFDYAHLQEAPEMKHFPTARPRSKITGERMEKIVGGPNWEEILGGEFEKRKADTNFEGIETEIYGQFENTFMMYLPRLCEHCLNPSCAASCPSGAIYKREEDGIVLIDQEKCRGWRMCVSGCPYKKIYYNWDTGKSEKCTFCYPRIESGQPTVCSETCVGRIRYLGVMLYDADAIETAANATDEKDLYEAQLKIFLDPNDPVVAEMARADGVPQDWIEAAKRSPVWKMAMEWKVAFPLHPEYRTLPMVWYVPPLSPIKNAAEAGLIGHDREMPDVRNLRIPLRYLANMLTAGDEAPIATCLERMLAMRAYMRAKTVDGLIDEGVAARVGLTGLQIEEMYKVMALADYEDRFVIPTAHRELADEDIMGLRGGCGFTDGNGCSTGISEGSLFRGKKRGLTIPEAMRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP5</accession>
    <name>A0A2M9PDP5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA-cytidine(32) 2-sulfurtransferase</fullName>
            <ecNumber evidence="6">2.8.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Two-thiocytidine biosynthesis protein A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">tRNA 2-thiocytidine biosynthesis protein TtcA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ttcA</name>
        <name evidence="8" type="ORF">CNY89_07060</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>AH2 + ATP + cytidine(32) in tRNA + S-sulfanyl-L-cysteinyl-[cysteine desulfurase] = 2-thiocytidine(32) in tRNA + A + AMP + diphosphate + H(+) + L-cysteinyl-[cysteine desulfurase]</text>
            <dbReference type="Rhea" id="RHEA:57048"/>
            <dbReference type="Rhea" id="RHEA-COMP:10288"/>
            <dbReference type="Rhea" id="RHEA-COMP:12157"/>
            <dbReference type="Rhea" id="RHEA-COMP:12158"/>
            <dbReference type="Rhea" id="RHEA-COMP:14821"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61963"/>
            <dbReference type="ChEBI" id="CHEBI:82748"/>
            <dbReference type="ChEBI" id="CHEBI:141453"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 1 [4Fe-4S] cluster per subunit. The cluster is chelated by three Cys residues, the fourth Fe has a free coordination site that may bind a sulfur atom transferred from the persulfide of IscS.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">tRNA modification.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="6">The thiolation reaction likely consists of two steps: a first activation step by ATP to form an adenylated intermediate of the target base of tRNA, and a second nucleophilic substitution step of the sulfur (S) atom supplied by the hydrosulfide attached to the Fe-S cluster.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the TtcA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.-" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000349">
        <property type="protein sequence ID" value="PJN95677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00014"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034227">
        <property type="term" value="P:tRNA thio-modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01850">
        <property type="entry name" value="TtcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011063">
        <property type="entry name" value="TilS/TtcA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012089">
        <property type="entry name" value="tRNA_Cyd_32_2_STrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035107">
        <property type="entry name" value="tRNA_thiolation_TtcA_Ctu1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01171">
        <property type="entry name" value="ATP_bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004976">
        <property type="entry name" value="ATPase_YdaO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0819">tRNA processing</keyword>
    <keyword evidence="6" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="ATP_bind_3" evidence="7">
        <location>
            <begin position="47"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="PP-loop motif" evidence="6">
        <location>
            <begin position="52"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="130"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="270" mass="30709" checksum="5D5A7413CFCA9CB0" modified="2018-04-25" version="1">MLDTDEIHPLFHGAPDSGEFRKLRKRIIRLTREAIETYGMARRGDRWLVCLSGGKDSYTLLAALTELQWRGLLPVEILACNLDQGQPGFPATVLPEFLSRMGVPHRIEYQDTYSVVVDKVPSTKTYCALCSRLRRGHLYRVAREEGCSAVVLGHHRDDVIETFLLNLFHGGKLAAMPPKLLNDEGDLYVHRPLALVAEEDCARFARAMNYPIIPCDLCGSQEGLQRVQIKRMVDDWEKRSPGRRQIIFRALTQANPSHLLDPSLFDFRNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS3</accession>
    <name>A0A2M9PDS3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000358">
        <property type="protein sequence ID" value="PJN95658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="10977" checksum="F2B6FB9EAE9A2984" modified="2018-04-25" version="1">MGAAVDRFVFTLLVQVGRKPGDGLPDGATGAAILCYAPAADEETAVRETVALLKQADMAPLDVTGYGTLEERLAAGEVSEEEQELMAMAGAQDAVVVAEMTPFFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY6</accession>
    <name>A0A2M9PDY6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cytochrome P450</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06605</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the cytochrome P450 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000316">
        <property type="protein sequence ID" value="PJN95760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002397">
        <property type="entry name" value="Cyt_P450_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00359">
        <property type="entry name" value="BP450"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00385">
        <property type="entry name" value="P450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="SSF48264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="449" mass="50507" checksum="1F08001AC0812493" modified="2018-04-25" version="1">MDAGLPDCDVRSVAMTRFNELEEPVEDGAVISALGLAFRSFEQEGMYELFSRAREEEPVFFAPDIGYYVVTRRRDVLSVFQDTDRFSAAIALNPMRPLPAEVCTFLREGRFTHQQIQANAENPVHARVRAAAGRFLNMRRFYAMEPAIRELVEQFASKLEGHREVDLVAEMTYELPARVIFLLLGIPDSDTAQIKRWADKRLMFTFGELTPEETMDAARDMLAYWHYCREMVEARIENPIDDYASAMLAIRNGDDSILSLNEITGLVFGILLAGHETTTTSSTNMIHAMLTHRQEWERVVADPTLAGNAVEECLRFASSVVSWRRIAREDVTIGGVTIPKGGHVLLSLGSANRDEAHFTQSETFDIARANARQHLSFGYGMHVCIGAPLARVQMRVILEVLTRRFPRMELVPGQDINWLRTLCFRGPTSLMIAPEGFPSAARSGTRLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE31</accession>
    <name>A0A2M9PE31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">BMP family ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000298">
        <property type="protein sequence ID" value="PJN95807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014664020" evidence="1">
        <location>
            <begin position="26"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="30"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="32763" checksum="68443FEEAD21DF04" modified="2018-04-25" version="1">MIVRRTLLGAISAAALFAGAGLAQAQETYVALISKGFQHQFWQAVKAGADKAAAEYDVTVTFEGPDTEAQVDRQIDMLAAALAKKPAAIGFAALDSQAAIPLLKQAQAEEIPIIAFDSGVDSDIPAATAATDNLAAAALAADKMAELIGGSGKVALVVHDQTSRTGIDRRDGFVNQMKEKHPEVEIVDIQYGAGDQLQSTEIAKAILTANPDLKGFFGANEGSAIGVINAVTELNRPEVVVIGYDSGTQQKEAIRSGKMAGAITQNPVGIGYETVKAAVAAAKGEAVPKSIDTGFYWFDKTNIDSPEIAAVLYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE54</accession>
    <name>A0A2M9PE54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000293">
        <property type="protein sequence ID" value="PJN95821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045616">
        <property type="entry name" value="DUF6446"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20044">
        <property type="entry name" value="DUF6446"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15362" checksum="8EE0BA258BE4A794" modified="2018-04-25" version="1">MIGFLAFTAVFGVALWWAQTRFWYERVEGIGALTVAGVPTPVEDYQGVDASSSPLKLRGCFQADPAAFARAEPAPDATPLTGPGWFDCYDAGTLTEDLAGGRARAYALTRDDPDGFDLMAAIYPDGRGYLWRQLGAQYREQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE67</accession>
    <name>A0A2M9PE67_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000285">
        <property type="protein sequence ID" value="PJN95845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="359"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="372"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="574"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="574" mass="60351" checksum="311DE81069269EA7" modified="2018-04-25" version="1" fragment="single">MADDERLLISLEARITDFERKMAQAEKRGTRTYTKLRQDSAGATKGMEADMNRATTRINQALAQGGAQMGALGKTWAVGLVGGIAGGLAAAGLSGIITQVGDVARSVATVGDEARRAGVSAKAFQEWKFVAEQNRIGIDAMVDGLKELNLRADEFAITGKGSAAEAFARLGYGAEEVKRKLEDPSALLLEIIGRLEQMDKAAQIRIADELFGGTAGERFVELLAQGEDGIRATITAANDLGIIMDDELIAKAAEVDRNFHAIAATVGTALKSAIVSAADSLTDFINRFREFQHQSNSVLRGQQLSITSAQAEAADQLREIEMQENMGVPAPDSNTWDQQRAQWEKVIADRQKQLDQIDGILNDRTPPPKPMDKPGDRTWTPPAYVPPPASGGGGGGKGGRGGGQSEAAKRAEDFQRETEQLLKRTAALKAGTLAQAEINPLIEDFGFAAEFASARTELLLAAQQAGVPITAELKGQIDQLALGYANAAAASGELEATQAEAMDRAQELGRLRQDTIGGFAKDLMNGVTAADAFNNALGRIADRLIDMALNAAFPVTPAAGGGLGALGGLGGGAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI6</accession>
    <name>A0A2M9PEI6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000245">
        <property type="protein sequence ID" value="PJN95955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="17245" checksum="96AFFFD38CDD4050" modified="2018-04-25" version="1">MLRSTAGSRLYIGAEPSLTETFNPYPHAVYGGVTWVEIKRLEAMGSLGLAWDTKDYTAMTDGDAPVMTTIKDTLRGQVMQIVMGIEDADPGQLLLLDAFHDTASYHFRLTFGDEAGDPSREWTALVTTFNEQLDNASSVMKRVADLHVTSAIINTTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL3</accession>
    <name>A0A2M9PEL3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">FAD-linked oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_05190</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000233">
        <property type="protein sequence ID" value="PJN95990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003885">
        <property type="term" value="F:D-arabinono-1,4-lactone oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007173">
        <property type="entry name" value="ALO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010031">
        <property type="entry name" value="FAD_lactone_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016171">
        <property type="entry name" value="Vanillyl_alc_oxidase_C-sub2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43762">
        <property type="entry name" value="PTHR43762"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04030">
        <property type="entry name" value="ALO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="3">
        <location>
            <begin position="29"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="550" mass="58687" checksum="4F36B4E6A2B15A82" modified="2018-04-25" version="1">METSTIAVAATGTAPTWENWSGNLRHVPPVDGEPYYFAPTNLAELQAVLAQARQNGATVRVSGQRHSQSPLVADDNRVNPPAKADAYLVDMSCYVDIGTTGIEAGPGPNQVTVNPGVSESDLDAFLTSHDLMFRTATAGGFFSLGGMTAVDVHGGTVDAPIFAETASAFTILGADGALTTIDASSPASGGWSPLQFARVSLGGLGVVTRITIDVLPRPWAETLEGGTTRYLLKDEPAFVAQFQDLLTGGGKHDRIEVFYTPYAAAPNLPFPPLPNFLVLWWNVVGDPSPKTPPSGPQPETACALSQEGKFGAPMLGGLAGYGAQFVRASQYYANCYNPLHIPPVPTAGFAAIALDEVESQAGAANAIHSDLWLAESSQVMFMSYFFEMPALDAAGLSKVWAGLDAVARRVIQDGAFHIAAPMEFRFVKAGDSAMSGAYSTNPNAWFVNLDLIGFIEATPSSAYPAPLLQFFADVERDWVAMGGFPHNGKMYGFYDPSQPAGTHSAAFNPNFLADLRQRRGDRLTAFNAYRKARDPDGRFCNAFLRRLLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP4</accession>
    <name>A0A2M9PEP4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000229">
        <property type="protein sequence ID" value="PJN96003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="197"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="225"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="27980" checksum="EE57FB30CD2BFEEB" modified="2018-04-25" version="1">MTFAEFFSTYFAFMSSPEGWIALVTLIALEVVLGIDNLIFISILSNKLPEHQRVRARRLGIGAALIMRLLLLATISWIVGLTAPVFTAFGHAFSWRDLILIAGGLFLVWKATKEIHHTVDPIDKKEDIVAHTVSMSMGAAVFQILLLDLVFSIDSIITAVGMTDQIAIMYIAVIFAVTVMLLAATPLAQFIEKNPTIVMLALAFLLMIGATLIADGFGFHVPKGYIYAAMGFSVLVEFLNMLARRRRHPENPNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV5</accession>
    <name>A0A2M9PEV5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000214">
        <property type="protein sequence ID" value="PJN96042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="STAS" evidence="1">
        <location>
            <begin position="21"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9267" checksum="A5FADCF0FE9DE731" modified="2018-04-25" version="1">MNEAGAAAGEVTFESAGDGRMIRFAGPLLVTDLGALAAGLKGLEGAGPVTLDLSKAGAMDTAGAWLIVTLRRRLKAEGVETRVEGPATSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF54</accession>
    <name>A0A2M9PF54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000177">
        <property type="protein sequence ID" value="PJN96168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11132" checksum="50F39069B2093FEE" modified="2018-04-25" version="1">MSAFAATVGALFADPNIGRGAVYIADGGAPVLVRAVARRADAISDFGEARIWSETTRIDLRVAEVANPRPGDRIEIDGDAFLIQGEPVRDRERLVWTVDLRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE9</accession>
    <name>A0A2M9PFE9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000164">
        <property type="protein sequence ID" value="PJN96214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040871">
        <property type="entry name" value="HopA1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17914">
        <property type="entry name" value="HopA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="36737" checksum="3CF3F62587CB1A5F" modified="2018-04-25" version="1">MYDAAGLALEQRKELAVALDRFAYRTPWLFDFDGEPVTVSAVARPADDHMPLTQALQATFYDRCYTRRTGRPGVLAAAVPEFVSRLSAANAGREEWDRGWTVFQIATGGQVFVRKGERERMAVPGAFLTEAMVGMAPQVGTTVSLRVPHESLDAQPGYYFAFGETLDELADQLSIVRVYFNVRAELAPELLDALTGPLNRYQTPFQLKTPISPAGYDRADTAVLYFGARYFPIVARIVDLFRRRVSLDEPVPLFTKRLWPGIGVALDPGSGESFGAHRSRLVAEGLVDAWSRGIPRLEAVTERFVAGGLDPARLWLTPGAADRFDTPQEAALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT6</accession>
    <name>A0A2M9PFT6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetolactate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000113">
        <property type="protein sequence ID" value="PJN96379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="2">
        <location>
            <begin position="31"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="23837" checksum="6F6346C0982DAD3B" modified="2018-04-25" version="1" fragment="single">MKDTPQGFPQVGGPTDVEKPVPQEIFEVLFGSDVMADAIRALDIPYVALNPGASYRGLHDSLVNYLGNKGPQMLLCLHEEHAVAIAHGWAKVTGRAMAAVAHSNVGLMHATMAVFNAWCDRMPVLLLGATGPMDASKRRPWIEWIHTSRDQGALVRDYTKWDDQPGSALAARESILRADWIANMAPKGPVYVNLDAGLQEAPIAAAPARDRPPPRYRSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW3</accession>
    <name>A0A2M9PFW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000106">
        <property type="protein sequence ID" value="PJN96409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004896">
        <property type="entry name" value="PucC-rel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03209">
        <property type="entry name" value="PUCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6044" checksum="D49BAFBD3D3B1599" modified="2018-04-25" version="1" fragment="single">MRHLGWFDIFRLGLVQAGIGAIVVLTTSTLNRIMVVELALPASLSGALAALYYLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX5</accession>
    <name>A0A2M9PFX5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Carbohydrate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_02475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000094">
        <property type="protein sequence ID" value="PJN96451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="111"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="186"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="246"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="74"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="30078" checksum="9FCC0D741176B7DE" modified="2018-04-25" version="1">MSAARSSLPRTLGAHAILLAWTVIALFPVFVIVVNAFKSRRAIFSDPLALPTPATFDAVGFKTVLAQGDFLLYFQNSLVVTVVSLALVLLFGAMAAFALSEYRFRGNALMGLYLALGIMIPIRLGTVAILQLMVASGLVNTLTALVLVYTAQGLPLAVFILSEFMKSVSADLKNAGRIDGLSEYTIFFRLVLPLVRPAMATVAVFTMIPIWNDLWFPLILAPAESTKTVTLGAQVFIGQFVTNWNAVLAALTLAILPVLVLYLIFSRQLIRGITAGAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG02</accession>
    <name>A0A2M9PG02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADPH-dependent FMN reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000086">
        <property type="protein sequence ID" value="PJN96480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN_red" evidence="1">
        <location>
            <begin position="2"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="19524" checksum="60142CD30BE7F371" modified="2018-04-25" version="1">MTRLVGLAGSLRKASFNAGLLRAAVAEAPEGVELVPAGIEGIPVYDGDLETAEGIPEAVTRLNDLVAGSDGLILFSPEYNNSLPGPFKNAIDWMTRPKGDIARVFRGRPVAVVGASPGGFGTILGQNAWLPVLRTLGTRPWFEGRLMVSRAGSAFDAAGELTDDNVREQLRVFLAGFAAFAADQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG21</accession>
    <name>A0A2M9PG21_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Beta-ketoacyl-[acyl-carrier-protein] synthase I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02630</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000102">
        <property type="protein sequence ID" value="PJN96424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="3">
        <location>
            <begin position="4"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="408" mass="43090" checksum="764C0D94E3EF3C5D" modified="2018-04-25" version="1">MRRVVITGIGIVSSIGNDAEEVARSLKEGRSGISFAPDYAEHGFRSQIHGKPDLEPSEHVDKRQMRFMGDGAAFNYIAMEQAIRDSGLEPGDVSNERTGLIMGSGGPSTKNLFEAHRIVIEKGAPKRMGPFMVTRGMSSTNSACLATPFKIKGVNYSITSACSTSAHCIGSGVEQIQFGKQDIVFAGGGEELDWTLSCLFDAMGAMSSKYNDTPQTASRAFDANRDGFVIAGGGGVVVLEELEHALARGAKIYGEVTGYGATSDGYDMVAPSGEGGERSMRLALSTIGNRKVGYVNAHGTSTPAGDVTEVQAVRRVFGEENMPLISSTKSLTGHSLGATGVQEAIYCLLMLRDDFITASANVTTLDPALKPGEIVTERVDNAGLDTVISNSFGFGGTNATLAMSRYHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG47</accession>
    <name>A0A2M9PG47_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000074">
        <property type="protein sequence ID" value="PJN96521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="7386" checksum="C5D64D62A4EFD314" modified="2018-04-25" version="1">MKRRLCIVVLLRFIRRFHRTWDIEVVEQRHKLIALRSTLCEFFVGEFTDDPCDPLGRILIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA5</accession>
    <name>A0A2M9PGA5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000068">
        <property type="protein sequence ID" value="PJN96552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7412" checksum="8C52180660546C33" modified="2018-04-25" version="1">MVQNAYEAAQKVPGAGFLSFSDPTAHYAVFKAPNVLHDQVKSFVDDTALLTIQSPGAGVAAGPAAAKPAGLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD0</accession>
    <name>A0A2M9PGD0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000056">
        <property type="protein sequence ID" value="PJN96608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="15912" checksum="FC88D1144E0AABD3" modified="2018-04-25" version="1" fragment="single">RARTYAGEVIRAFAVKATGPEALAESLSGGNLQKFIMGREILQTPEVLIVSQPTWGVDAGAAAAIHQALVDLAARGSAIVVISQDLDELLTLSDGLAVINQGRLSPVMRVGEVAIDEIGLLMGGVHGDPKATVALAHDPMLADLYDAETAHAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE0</accession>
    <name>A0A2M9PGE0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01560</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000056">
        <property type="protein sequence ID" value="PJN96607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="115"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="244"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="323"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="357" mass="37979" checksum="680E029C3572FAA8" modified="2018-04-25" version="1">MRISLQKRKELSRSMLYLTPVIAVALTMATGAIIFTLIGHNGLAAVWEIFVSPLIDPNRWQDLGIKAAPLVVIAVGLSFGFRANVWNIGAEGQYILGALASTGVALATWEMEGVWILPAMCVAGVLGGMAWAAIPAALKTRLGVNEILTSLMLTYVAVQLLYYLMNGPWKDPEGFNFPQTRLFNMSQTMPMLGNTIVHLGVPLAAAIAVVAWFVMTRTTFGFQIRAVGRAPHAARYAGFDANRTIWTTLLLGGGLAGLAGAFEASGTFGQMTPQFPAGYGFTAIIVAFLGRLHPLGILLAGVVMAVTYIGGETAQTRLGLPDAAAGLFQAMTLFFLLATDVLVRYRIRVSGAKGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL5</accession>
    <name>A0A2M9PGL5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cytochrome c1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_01015</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002326">
        <property type="entry name" value="Cyt_c1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10266">
        <property type="entry name" value="PTHR10266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02167">
        <property type="entry name" value="Cytochrom_C1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00603">
        <property type="entry name" value="CYTOCHROMEC1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 6" id="KW-0349">Heme</keyword>
    <keyword evidence="5 6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0732">Signal</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857797" evidence="8">
        <location>
            <begin position="23"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="229"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="9">
        <location>
            <begin position="46"/>
            <end position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="27955" checksum="E85CF9EBC3F1D8DA" modified="2018-04-25" version="1">MIRKLILTAAAVVGLGGGAAHAAGGEAHITDYAFSFEGPFGSFDQLQLQRGLQVYNEVCAACHGLKFVTYRNLADPGGPALSDEQMRLFAAAHEVEDPATGETRPAGPPDHFAHSSLPNAPDLSLMAKARAGFHGPAGLGINQLLHGIGGPEYIATFVHAFTGEQEEVGGVTLYENTAKGIYVAMPPVLQDDLVTYQDGTPATVDQMAQDVAAFLMWTAEPKMMARKQAGLTAVLFLVVLTVLLYFTNKKIWAPHKGAKKTHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS6</accession>
    <name>A0A2M9PGS6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit PurS</fullName>
            <shortName evidence="5">FGAM synthase</shortName>
            <ecNumber evidence="5">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Formylglycinamide ribonucleotide amidotransferase subunit III</fullName>
            <shortName evidence="5">FGAR amidotransferase III</shortName>
            <shortName evidence="5">FGAR-AT III</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">Phosphoribosylformylglycinamidine synthase subunit III</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">purS</name>
        <name evidence="6" type="ORF">CNY89_01135</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PurS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000039">
        <property type="protein sequence ID" value="PJN96674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01926">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003850">
        <property type="entry name" value="PurS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036604">
        <property type="entry name" value="PurS-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34696">
        <property type="entry name" value="PTHR34696"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02700">
        <property type="entry name" value="PurS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82697">
        <property type="entry name" value="SSF82697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00302">
        <property type="entry name" value="TIGR00302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 5" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8645" checksum="865510BD59C98503" modified="2018-04-25" version="1">MKARVHVTLKRGVLDPQGEAVRHALGSLGFDGVGEVRMGKVIELEISETDPARAEARVREMCEKLLANTVIENYAVELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT5</accession>
    <name>A0A2M9PGT5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gamma-glutamylputrescine oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000019">
        <property type="protein sequence ID" value="PJN96765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="31"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="427" mass="45891" checksum="AF19B4BFC5B61A6E" modified="2018-04-25" version="1">MAEGAYPDSYYAASAHPAPPRPKLAGEIGPDVCIVGAGYTGLSAGLDLAEKGYGVVVLEGAKVGWGASGRNGGQIVNGLNAGLSTIEARYGRATADFVGTVVQEGGRIIRERVARYAIRCDLKDGNVFTAFTPKQMKELEDKQALWRRHGMDDFEMLDRAALRTHVGSDVYLGGMLDRTGGHMHPLNLALGQAAALESIGGVIHEDSRVTSIEGVEGAPVVRTATGVVRPKVLILAGNAYLGHVVPALENRVMPFSTQMIATEPLGERARALLPTDMCVEDLRWILDYYRLSADGRLLFGGGTIYGGTDPDDIKGKILPNLVKVFPQLSGVKVDFAWSGNCALSFSRVPQMGRLGPETYFATGYSGHGVVGSHLFGRILAQAVDGDLTRFDTFARVPWLPFPGGRRFRVPYSAIGAWWYGLRDRLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH03</accession>
    <name>A0A2M9PH03_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00360</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000010">
        <property type="protein sequence ID" value="PJN96813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="25"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="3">
        <location>
            <begin position="147"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25460" checksum="842BEFB2DB8E9EB8" modified="2018-04-25" version="1">MRTAHRIASEVGWLSRQPDAFKSLVLDACDLQTRSVGENLYSLGDPPGGLHCLVEGSLDLVTTAGTFSPFLGFIARPGWWAGDVAATTRSIRRAEVRARTDVVLLFLPAHRLDRIAEEDPTFWRRLGELNAEHLDNALMFAATAVQRDVRVKVIATLLRLASYDADKDADIDINCTQAEIAEMTGVGRNTVGETLKKLRDRSLVSQRYGRIGFNPVRLRAMLTGGGTARRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH05</accession>
    <name>A0A2M9PH05_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000008">
        <property type="protein sequence ID" value="PJN96825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="27439" checksum="F3ED23F513E3FA77" modified="2018-04-25" version="1">MRVWPGNQFRIYTARSRFDLAFRGVPPLAVPSIPGATHGPGANPGEVSFSITGEPTSAGDGDIPGDRLGAIMGYASRIAGVLASHDTTSLPITRVSGGHAEGFPVLVEWWAIGSNERAGAIGTAIVIPAASPIVPSVPGAEVGPGDQPGEVMASIVAPPSSFGDALVQGDGLGVITNYVTRIAGVEVTHDTTTLPIVRTTGGHAEGVEVPVEWWALGSGGRAGLAGSALVYPAVTPPEVEEIIGLVEQGSGFGLVDRASGRGLVLFPTSAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH28</accession>
    <name>A0A2M9PH28_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Beta-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="21846" checksum="D36DC069CD406CFE" modified="2018-04-25" version="1" fragment="single">TLSGTRPGPLEALASELGSRAHVLPTDLSDAQAVEALPKKAAELMGSVDILVNNAGVTRDQLMMRMSDADWLAVLEVNLTSVMRLSRGVLRGMMKARWGRIVNVSSIVGVTGNPGQGNYAASKAGVIGLSKSLAAEVASRGITVNCVAPGFIATAMTDALGEDQKARLLTGIPAGRMGTPEEIASAVVYLASAEAAYVTGQTLHVNGGMAMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P483</accession>
    <name>A0A2M9P483_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004860">
        <property type="protein sequence ID" value="PJN92335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7107" checksum="30866318D7E147BD" modified="2018-04-25" version="1" fragment="single">DFAGFSQSLDASYDATTAQVFGEVGYAIERGPARRDFAGFSQSLDASYDATTAQVFGEVGYAIERGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B4</accession>
    <name>A0A2M9P4B4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DHO_dh domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_30310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004748">
        <property type="protein sequence ID" value="PJN92370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DHO_dh" evidence="2">
        <location>
            <begin position="33"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="6847" checksum="9D04F00CE11E2015" modified="2018-04-25" version="1" fragment="single">AGLDLPNPLGLAAGFDKNAVALGPLLQAGFGFVKTSVAGLDLPNPLGLAAGFDKNAVALGPLLQAGFGFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B5</accession>
    <name>A0A2M9P4B5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_30345</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004761">
        <property type="protein sequence ID" value="PJN92363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7802" checksum="38FBF6A953FA62BD" modified="2018-04-25" version="1" fragment="single">TNPLERVNGEIKRRTEVVGIFPNEAAITRLVGAILLEQNDEWAVQRSRYMTLETIAPIQDDPVIGLPAMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E7</accession>
    <name>A0A2M9P4E7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_30135</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004688">
        <property type="protein sequence ID" value="PJN92393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7772" checksum="5E7F8170EA6837F8" modified="2018-04-25" version="1" fragment="single">RRMAEKALTAVIQEAYIQGVSTRSVDDLVKALGMSGISKSQVSRLCAEIDERVTGECPIFCVRVCRSILRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S6</accession>
    <name>A0A2M9P4S6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">3-methyl-2-oxobutanoate hydroxymethyltransferase</fullName>
            <ecNumber evidence="3">2.1.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_28925</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homodecamer; pentamer of dimers.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the PanB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.11" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01004238">
        <property type="protein sequence ID" value="PJN92525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003864">
        <property type="term" value="F:3-methyl-2-oxobutanoate hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003700">
        <property type="entry name" value="Pantoate_hydroxy_MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02548">
        <property type="entry name" value="Pantoate_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5946" checksum="0E6B4BB06F28B593" modified="2018-04-25" version="1" fragment="single">MEMMILHGQAVRRGLSRALMVVDMPFGAYEEGPTASAWCCTACPRRCRSRWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W6</accession>
    <name>A0A2M9P4W6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004059">
        <property type="protein sequence ID" value="PJN92587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013689">
        <property type="entry name" value="RNA_helicase_ATP-dep_HrpB_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08482">
        <property type="entry name" value="HrpB_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HrpB_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="HrpB_C" evidence="1">
        <location>
            <begin position="54"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9615" checksum="72279C6398C61977" modified="2018-04-25" version="1" fragment="single">RLQEMFGVSVHPTLGPRRTPVVLELLSPAQRPVQTTSDLPGFWAASYADVRRDMRLQEMFGVSVHPTLGPRRTPVVLELLSPAQRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P509</accession>
    <name>A0A2M9P509_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thiopurine S-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_28040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003928">
        <property type="protein sequence ID" value="PJN92627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008854">
        <property type="entry name" value="TPMT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05724">
        <property type="entry name" value="TPMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51585">
        <property type="entry name" value="SAM_MT_TPMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7357" checksum="C30438906767EC20" modified="2018-04-25" version="1" fragment="single">RGRYAAHLAALTGTAPQLLLAFDYDQAQLAGPPFSVTEAEIRALYEPGYRVTGLERRAGATPRTWRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P531</accession>
    <name>A0A2M9P531_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cytochrome ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27735</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003836">
        <property type="protein sequence ID" value="PJN92661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009060">
        <property type="term" value="P:aerobic respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01165">
        <property type="entry name" value="CYCOXIDASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="2">
        <location>
            <begin position="1"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9952" checksum="4BD1D220EC49DD3B" modified="2018-04-25" version="1" fragment="single">IGALLAGVAPHSGWFMYTPLSSGIYSPGINGDVWLLGVTFVEISALSAAVEIIVSILKLRAPGMSLERMPILAWYLLVTAFMMLFGFPPLILG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P539</accession>
    <name>A0A2M9P539_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1285 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003844">
        <property type="protein sequence ID" value="PJN92657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010707">
        <property type="entry name" value="DUF1285"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06938">
        <property type="entry name" value="DUF1285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="5014" checksum="3E0C5A5E515F362D" modified="2018-04-25" version="1" fragment="single">MGRAALARLFASILKREGDSYFLVTPVEKVGIRVDDAPFVAVDFTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P577</accession>
    <name>A0A2M9P577_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003805">
        <property type="protein sequence ID" value="PJN92673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6694" checksum="C97054AA65B282B3" modified="2018-04-25" version="1">MRAWPGSSTARRPPPRSSTMLGPIGVHLTRTGPEAFEVMALRSFAVSLWTDLMEMAAEYNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P586</accession>
    <name>A0A2M9P586_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Restriction endonuclease subunit M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27390</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003717">
        <property type="protein sequence ID" value="PJN92702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002295">
        <property type="entry name" value="N4/N6-MTase_EcoPI_Mod-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00506">
        <property type="entry name" value="D21N6MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="20"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10627" checksum="26D17B87D9F3D924" modified="2018-04-25" version="1" fragment="single">PATLDELDAKGDIFWSKNGNPRRKVYLDESAGVSVQDIWMDYRDAHNQMVHVTGYPTEKNINLLRRIVEASSNPGDIVLDCFCGSGTALVAADMLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E2</accession>
    <name>A0A2M9P5E2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003569">
        <property type="protein sequence ID" value="PJN92757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7386" checksum="BDCC5765A2C6BA79" modified="2018-04-25" version="1" fragment="single">MDGPEVAIEQLFIENIEISMRLVNADTTPLLSKTVRVGKLISRSFWLDRILDASELSGDAGDPERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G2</accession>
    <name>A0A2M9P5G2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003478">
        <property type="protein sequence ID" value="PJN92786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008866">
        <property type="entry name" value="Phage_lambda_GpA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05876">
        <property type="entry name" value="Terminase_GpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11922" checksum="558CBB6901AEE0DC" modified="2018-04-25" version="1" fragment="single">EYEASDQRRFFVPCPHCGAMQWLKFDRLRWQKGRPETAEYHCEGCETPIAEHHKTAMLERGEWRATATAADPTTVGYHLSALYSPIGWLSWERIVRAWDAAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P625</accession>
    <name>A0A2M9P625_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TraG-D_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_24565</name>
        <name evidence="3" type="ORF">CNY89_26025</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003303">
        <property type="protein sequence ID" value="PJN92842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002859">
        <property type="protein sequence ID" value="PJN93014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032689">
        <property type="entry name" value="TraG-D_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12696">
        <property type="entry name" value="TraG-D_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TraG-D_C" evidence="2">
        <location>
            <begin position="5"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="75"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11623" checksum="0DAF7620275776F9" modified="2018-04-25" version="1" fragment="single">GLPLGRSYGLHAWPFCQNWAQLVDIYGESGAESFLASCDAFCVYGLDDPRTPQLVSDFIGRITPSELGGFQTVKYGDRSPLQPPVIPQPSLAQRRRSRLEEKQAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J9</accession>
    <name>A0A2M9P6J9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002382">
        <property type="protein sequence ID" value="PJN93191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10702" checksum="ED92885491E16556" modified="2018-04-25" version="1" fragment="single">KIGVIESRWHDATNGIKKNTTVKPLFDFLADLHFGNHHAYDYEMVGTQEAFISALERVARSRATTIAYLAMHGSDNGLHLHGGDRISRTILKIHF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X5</accession>
    <name>A0A2M9P6X5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002141">
        <property type="protein sequence ID" value="PJN93301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10220" checksum="6D76293AE7AE3269" modified="2018-04-25" version="1" fragment="single">ADMLERKWIGVDNSPEALRTMLGRFEHGTKPMGDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLLSVEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P772</accession>
    <name>A0A2M9P772_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DDE_Tnp_Tn3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21045</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001958">
        <property type="protein sequence ID" value="PJN93406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="8"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14286" checksum="FFCC7C5F3D8EF117" modified="2018-04-25" version="1">MSDWGHVTTRELNKGEAENALKRAIFFHRVGRIRDHGLQAQSHRASAVNLVACAIVLWNTTYLQAAIERLSAAGRPVPMTISRTCPRWDRQHINLTGDYLWADDDMPADRLKPLRQLPGLSEQTSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P785</accession>
    <name>A0A2M9P785_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001925">
        <property type="protein sequence ID" value="PJN93424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="19234" checksum="F0733B8C2641BEC5" modified="2018-04-25" version="1" fragment="single">LEGPLPPLWHWLAFLPDAPASRLSSSGEAPDPLLPPLPGRRVWAGGRLRFHGELRIGETLHRRSEILAIAREETPSGVRTRVTLSHELSTARNLGVSEVQEFVFSETPRQVEALSGPGAPLPAPAAWSVQLPLDPVRLFRFSAATFDAERLHYDLAYARAQGCPGLAAQDRLLAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P798</accession>
    <name>A0A2M9P798_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">IS1380 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20805</name>
        <name evidence="3" type="ORF">CNY89_23115</name>
        <name evidence="2" type="ORF">CNY89_25835</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003238">
        <property type="protein sequence ID" value="PJN92860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002449">
        <property type="protein sequence ID" value="PJN93159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001901">
        <property type="protein sequence ID" value="PJN93436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13701">
        <property type="entry name" value="DDE_Tnp_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="14"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6577" checksum="601890F0288883D8" modified="2018-04-25" version="1" fragment="single">MPTECSAKPMGFARVDGRSVVADFEGGAITSNAGGLLLGATDRAIGLVERFAACFTDGRSAERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B5</accession>
    <name>A0A2M9P7B5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001951">
        <property type="protein sequence ID" value="PJN93409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="3"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14511" checksum="E7CBCBD56B066ACA" modified="2018-04-25" version="1" fragment="single">QMSQDGLYMGGLKNVTIEDNYFGDYLSADPSDPTNKESIQFYTNGSTAPSEGVTIRGNTFSSEDYRQNILIFNELYRDGDSSAYHRNILIEDNYIRSAYTQGITVTHATAWSSATTPSPMIPTRSSTRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C8</accession>
    <name>A0A2M9P7C8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001890">
        <property type="protein sequence ID" value="PJN93442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6994" checksum="F4857E382D3D0A6A" modified="2018-04-25" version="1">MQFIIDNPTIQNVVVAYRIYSAIGGDHAGLYPDLPDTVSDARAQQILRSFTATLEAFVAPERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D2</accession>
    <name>A0A2M9P7D2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GreA_GreB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20890</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001922">
        <property type="protein sequence ID" value="PJN93425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070063">
        <property type="term" value="F:RNA polymerase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023459">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30437">
        <property type="entry name" value="PTHR30437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GreA_GreB" evidence="2">
        <location>
            <begin position="44"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="150"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="17958" checksum="D543C1E4404A806E" modified="2018-04-25" version="1" fragment="single">MLDADHMGRLNILASEPLHGAARLSTLLGKGAPHVVIVPSHEMPADVVNIGSDVSYRDEITGRVHSVRLAMPQDADIRIRRVSVLTPVGTALIGRAEGAVIDCEFPAGTLRRLAILRISKNGPKPESAGIFRRESVRRMGDATSEANRPPHVASERRDLERMSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F7</accession>
    <name>A0A2M9P7F7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001853">
        <property type="protein sequence ID" value="PJN93472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6546" checksum="2880EAEF68330B52" modified="2018-04-25" version="1" fragment="single">APVAAERVAFRFQITIPTGVGGEPYVSPVFLSNPDTGFTLTLTPEELTEIAEQPTITLGSTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L7</accession>
    <name>A0A2M9P7L7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cation acetate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_20300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001798">
        <property type="protein sequence ID" value="PJN93508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7749" checksum="DF916C8BAE5C7D7A" modified="2018-04-25" version="1" fragment="single">MDNLTTLSLIAVGLTFMIYIAIAIWARAGTTEEFYVAGKGIHPVANGMATAADWMSAASFISMAGIISFLGFTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P5</accession>
    <name>A0A2M9P7P5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">LysR_substrate domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001705">
        <property type="protein sequence ID" value="PJN93571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="1">
        <location>
            <begin position="3"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13414" checksum="20AC213D7AB215B0" modified="2018-04-25" version="1">MRTGISRSSAERVIRNELDIAVVTLPMAHPLLEVTPLRTDPYLAAIPGDMAGVPDVVGPEFFAGRKLLLDGRSQMDRLFRAWLAAAGVEPQVAMEIGSPMAVRNIVAAGLGVSLIEPETALAGGVPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P840</accession>
    <name>A0A2M9P840_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001556">
        <property type="protein sequence ID" value="PJN93689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13518" checksum="A3DED094B4B748A8" modified="2018-04-25" version="1">MPKRRRARYPSDLTDSQWAMIAPMIPDATSGGRPRKADKREIVEAILYFLRAGCACGSCRTTSHLGRRSTTTCAVGSEKASGQACSTPSSWPTGSRRAGKPRPRRRSSTAKASGRPIKRGLQRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P895</accession>
    <name>A0A2M9P895_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001473">
        <property type="protein sequence ID" value="PJN93767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="9104" checksum="DF7EB530B5F57237" modified="2018-04-25" version="1">MQQVVDEAQLLLDLRREVERVEVACASRLLAAAARSAAAVKSIRVIAIATICSDLLPSRQRVRDRAVWEFLPGVGRRGRWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A3</accession>
    <name>A0A2M9P8A3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribulose bisphosphate carboxylase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001463">
        <property type="protein sequence ID" value="PJN93777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000894">
        <property type="entry name" value="RuBisCO_ssu_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036385">
        <property type="entry name" value="RuBisCO_ssu_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00101">
        <property type="entry name" value="RuBisCO_small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00961">
        <property type="entry name" value="RuBisCO_small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55239">
        <property type="entry name" value="SSF55239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuBisCO_small" evidence="1">
        <location>
            <begin position="4"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="7322" checksum="1E825416EB9F76DB" modified="2018-04-25" version="1" fragment="single">MRITQGCFSFLPDLTDEQITAQVEYCLRNDWAVGIEYTYDPHPRNTYWEMWGNPMFDLRDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D6</accession>
    <name>A0A2M9P8D6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Lipid II flippase MurJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_18395</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001453">
        <property type="protein sequence ID" value="PJN93788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004268">
        <property type="entry name" value="MurJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03023">
        <property type="entry name" value="MurJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01806">
        <property type="entry name" value="VIRFACTRMVIN"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0133">Cell shape</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="129"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="158"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="201"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="27029" checksum="E62DA7591426AC32" modified="2018-04-25" version="1" fragment="single">MMMAAMLGAGPAAQAFLIAFSLPNMFRRFFAEGAFNLAFVPMFAKKLEAGEDARDFACDAFSALAGVLIALTLVGMAIMPWLVLAMASGFAGDERFTLSVLYGRIAFPYLIFISLTALLCGVLNATGRFAVAAAAPILMNLVMIAFLAWGWASGGNVGMWQIWSVPAAGVAQLWLTWWGADKAGMKIRFRRPRVTPELKRLAYIMGPAVLAGGVVQVNLLVGRQVGSFFDGAVAWLSYADRLYQLPLGVVGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E7</accession>
    <name>A0A2M9P8E7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Secretion protein HlyD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001451">
        <property type="protein sequence ID" value="PJN93790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="17816" checksum="0F02AF70A2F2CC84" modified="2018-04-25" version="1" fragment="single">FTLRPGDVVNQMMRPAGILIPATAGRVGLQAGFGQIEAQVLKPGMIGEVTCIAMPFTVTPVVITQVQSVIASGQIRPTDQLVDAQSARGGTLTAYMEPLYPGGLDRLPPGSNCIANAYTSNYETLHDPNTGAFKAFVLHAIDATGVVHAALLRMQALILPVRTLVLGGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J4</accession>
    <name>A0A2M9P8J4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 6-dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001390">
        <property type="protein sequence ID" value="PJN93865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_N" evidence="1">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03721"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9703" checksum="7D151C44A6FC4F6E" modified="2018-04-25" version="1" fragment="single">MKITVFGTGYVGLVQGAILAEVGHDVLCVDVDAAKVEALKAGRIPIYEPGLEEIVKKGHSEGRLNFTTDAAEGVAHGRVQFIAVGTPPDEDGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P949</accession>
    <name>A0A2M9P949_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 11">Delta-aminolevulinic acid dehydratase</fullName>
            <ecNumber evidence="4 11">4.2.1.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_16840</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>2 5-aminolevulinate = H(+) + 2 H2O + porphobilinogen</text>
            <dbReference type="Rhea" id="RHEA:24064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58126"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="4.2.1.24"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; coproporphyrinogen-III from 5-aminolevulinate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homooctamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the ALAD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.24" evidence="4 11"/>
    <dbReference type="EMBL" id="PHNO01001246">
        <property type="protein sequence ID" value="PJN94042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00318"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004655">
        <property type="term" value="F:porphobilinogen synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001731">
        <property type="entry name" value="ALAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030656">
        <property type="entry name" value="ALAD_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11458">
        <property type="entry name" value="PTHR11458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00490">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001415">
        <property type="entry name" value="Porphbilin_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00144">
        <property type="entry name" value="DALDHYDRTASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01004">
        <property type="entry name" value="ALAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00169">
        <property type="entry name" value="D_ALA_DEHYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="7 11" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8 11" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="245"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="230"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001415-5"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="327" mass="35361" checksum="B4E647270C2291DF" modified="2018-04-25" version="1" fragment="single">RPRRLRRSPWIRDLVAETRLTASDLIWPIFVREGEDLVEPIASLPGVERLSIDRAVRAAEEAAALGIPCVALFPFTEARDKNPEATEGWNPDNLVNRATRAIKAAVPQIGVMLDVALDPYNSDGHDGLVRGGEILNDETLAALARMALAQAEAGADILGPSDMMDGRVGVLRQALHDADFPDVAILSYAAKYASCFYGPFRDAVGSGGALRGDKKTYQMDPANRAEALRETALDLAEGADMVMVKPGMPYLDICAAVKAEFGVPTFAYQVSGEYAMIQAAAQNGWIDGERAMWESLLAFKRAGCDGVLTYFAPRRRPRAGRKGLTGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P954</accession>
    <name>A0A2M9P954_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001251">
        <property type="protein sequence ID" value="PJN94039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9487" checksum="2D4B4473485E58E7" modified="2018-04-25" version="1" fragment="single">MPEPAAGGMRPGTVYALAAAAGIAVANIYYNQPMLGLIEAEMPGAVAGLVPTVTQLGYAAGLFLVLPLGDVFDRRRLIVGQFGLLALALAFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P978</accession>
    <name>A0A2M9P978_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sodium-independent anion transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16610</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001214">
        <property type="protein sequence ID" value="PJN94085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015116">
        <property type="term" value="F:sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="220"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfate_transp" evidence="2">
        <location>
            <begin position="16"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfate_transp" evidence="2">
        <location>
            <begin position="165"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="28725" checksum="0F5E4A9154391F8F" modified="2018-04-25" version="1" fragment="single">MTSLHQYRAQWLGNVRGDLLSGLVVALALIPEAISFSIIAGVDPKIGLYASFSIAVVTAIAGGRPGMISAATAATAVLMVTLVRDHGLQYLLATTVLAGLIQIGAGLLKLGRLMRFVSRSVMTGFVNALAILIFLAQTPELIGVPWMTYPMIAAGLAIIYLFPRLTRVVPSPLVSIVVLTALTVAFGWDVRTVGDMGELPDTLPVFLLPQIPLSFETLRIILPYAAAVAVVGLLESLLTQNLVDELTDTPSDRNQECIGQGLANAVTGFMGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A7</accession>
    <name>A0A2M9P9A7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">tRNA (Guanosine(46)-N7)-methyltransferase TrmB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001185">
        <property type="protein sequence ID" value="PJN94124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008176">
        <property type="term" value="F:tRNA (guanine-N7-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01057">
        <property type="entry name" value="tRNA_methyltr_TrmB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003358">
        <property type="entry name" value="tRNA_(Gua-N-7)_MeTrfase_Trmb"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23417">
        <property type="entry name" value="PTHR23417"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02390">
        <property type="entry name" value="Methyltransf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51625">
        <property type="entry name" value="SAM_MT_TRMB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="22478" checksum="A4E5CC1883265DEF" modified="2018-04-25" version="1" fragment="single">PGDASGTGAGSGEVSGDGAGLASGETVDLAALFGDARPVWLEIGFGGGEHLVHQAALHPEVGLIGAEPFVNGVAMALARIEAEGLGNVRIHAADARDLLDQLPAGGIARVFLLYPDPWPKTRHWDRRFMNPDNLAALARVMAPGAELRLATDIEDYARHAIRAAEIAGGFALQGEPPDWARPWVDWVTTRFEARARREGRGSQYLTFVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C3</accession>
    <name>A0A2M9P9C3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001196">
        <property type="protein sequence ID" value="PJN94109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="305"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="322"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="342" mass="34158" checksum="3BC80295701CE5BC" modified="2018-04-25" version="1" fragment="single">AAQATADGKADAVHDHPAADGTTLEERLAELQAQINALAGAGTWGTFLDPMWSIATGSGPGEVVVSISSFPLSTREVNSIGYLMDGIGYSAPIAASFTIQTNTPGASESIAIRVEQSTAIGGEWSEPKSATAGAAVAPSAFVDADWDLTPGSGTAMATVEILSIPYNGGAAISAIEIQYNSTGSWIALSGVVPGTYNVAATGISGAATGRLRAVNAVGNGAASPTKAVTIPGGATAPAMFGTNQWALGQGTLPGSVAFTINALPGDGGSAITALQYTFDAGVSWTAFSAATTGTYQITGFTAGQSRTGRVRAGPPRQSIIPSRPPTSTATPSSRTCPTACSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J4</accession>
    <name>A0A2M9P9J4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MobC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001138">
        <property type="protein sequence ID" value="PJN94192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008687">
        <property type="entry name" value="MobC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05713">
        <property type="entry name" value="MobC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobC" evidence="2">
        <location>
            <begin position="66"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="11960" checksum="D4BB108880DE506B" modified="2018-04-25" version="1">MARRHAGRAPAANPPHGGGAGGAGAARGDDRPHPVGVHPAARARHPATGRRGRAAHRAALATALLRLGVNLNQIARHMNAGRAAPSYLPALIEDIRRHVERLVDDEPGRDRQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L5</accession>
    <name>A0A2M9P9L5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Carbon monoxide dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001123">
        <property type="protein sequence ID" value="PJN94211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="29" mass="2997" checksum="66C57F53DF942BD9" modified="2018-04-25" version="1" fragment="single">MYAFDFVRPKTLAEAVAALAAEDAQALGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L9</accession>
    <name>A0A2M9P9L9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Exodeoxyribonuclease VII large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">xseA</name>
        <name evidence="7" type="ORF">CNY89_15700</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001106">
        <property type="protein sequence ID" value="PJN94236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009318">
        <property type="term" value="C:exodeoxyribonuclease VII complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008855">
        <property type="term" value="F:exodeoxyribonuclease VII activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006308">
        <property type="term" value="P:DNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04489">
        <property type="entry name" value="ExoVII_LU_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003753">
        <property type="entry name" value="Exonuc_VII_L"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020579">
        <property type="entry name" value="Exonuc_VII_lsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025824">
        <property type="entry name" value="OB-fold_nuc-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30008">
        <property type="entry name" value="PTHR30008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02601">
        <property type="entry name" value="Exonuc_VII_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13742">
        <property type="entry name" value="tRNA_anti_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00237">
        <property type="entry name" value="xseA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA_anti_2" evidence="6">
        <location>
            <begin position="16"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="Exonuc_VII_L" evidence="5">
        <location>
            <begin position="132"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF13742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="20758" checksum="01B7A6022405CB2E" modified="2018-04-25" version="1">MELFETEAPGGNAPEFTVSEIAGAVKRVIEGEFGRVRIRGELGRVSRPGSGHVYLDLKDERASLAAVIWKGSVRGLGVQPQEGLEVVATGRLTTFPGQSKYQMIIEDLAPAGLGALMVMLEKRKAALAAEGLFDPARKRPIPFLPEVIGVVTSPTGAVIRDILHRLRERFPREVLVWPVPVQGERCAVEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P3</accession>
    <name>A0A2M9P9P3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_15615</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001095">
        <property type="protein sequence ID" value="PJN94250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007210">
        <property type="entry name" value="ABC_Gly_betaine_transp_sub-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04069">
        <property type="entry name" value="OpuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014721871" evidence="2">
        <location>
            <begin position="20"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="OpuAC" evidence="3">
        <location>
            <begin position="20"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="299" mass="31385" checksum="95267816E976CEB0" modified="2018-04-25" version="1">MFRFVAASSLALFAGAASAQVVVSSKIDTEGGVLGQIILQVLDHAGIDTEDRLQLGATPIVRQALIAGEIDVYPEYTGNAAYFFNRADEPIWKDAAKAYETAKTLDLEANRIVWLTPAPANNTWGIALRADVAESAGVTTLSEFGEWIAGGGPVKLAASSEFVNSPPALPAFQAAYGFTLTPDQLIVLSGGDTAATIQAAANQTSGANAAMVYGTDGGISVSGLKVVEDDKHVQPVYEPAPIIREATLAEHPQIAELLKPVFEKLDLVTLQTLNGQVQVEGLASADVAKAFLTENGFLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T5</accession>
    <name>A0A2M9P9T5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arsenical-resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_15435</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001074">
        <property type="protein sequence ID" value="PJN94281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015103">
        <property type="term" value="F:inorganic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004706">
        <property type="entry name" value="Arsenical-R_Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43057">
        <property type="entry name" value="PTHR43057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="120"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="155"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="183"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="23889" checksum="F5C0959D1F79B44A" modified="2018-04-25" version="1" fragment="single">CTAMVFVWSNLTRGEPHFTLSQVALNDSIMIVAFAPIVALLLGLSAITVPWNTLVLSVALYIIVPVIVAQALRRSLLARGGAAAIDTALSVLQPLSIVALLVTLVMLFGFQGEQIIAQPLVIALLAVPILIQVYFNSGLAYLLNRASGEQHCVAGPSALIGASNFFELAVAAAISLFGFNSGAALATVVGVLVEVPVMLSVVWIVNNSKGWYERGPAVRSLAERPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA02</accession>
    <name>A0A2M9PA02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001025">
        <property type="protein sequence ID" value="PJN94365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7606" checksum="9C0C7F91B997BA57" modified="2018-04-25" version="1" fragment="single">MGVFSWMNDQLLRMQWLSDLVAAGVSAVGLDPASRLGGSVQFFVYDVVKIFILLSTLIFAISWVQSYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA03</accession>
    <name>A0A2M9PA03_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001028">
        <property type="protein sequence ID" value="PJN94359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17902" checksum="0C22B9309E50CD25" modified="2018-04-25" version="1">MVDMQLVYGRTSHQTNGEFQGRYKHTGPCLPPGFEGLEHPVTASEALSRLLLLTARPKSLIHIRHLECRSDESGLTIEIRYSDMLERRLVVSRYVEQSGDSSDGMMFAEIVYPDPSQWDFTLSFTRYGKQRSRKEQMQRIPGEIIARIAREALGGQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA50</accession>
    <name>A0A2M9PA50_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GyrI-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001000">
        <property type="protein sequence ID" value="PJN94407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029442">
        <property type="entry name" value="GyrI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011256">
        <property type="entry name" value="Reg_factor_effector_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06445">
        <property type="entry name" value="GyrI-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55136">
        <property type="entry name" value="SSF55136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GyrI-like" evidence="1">
        <location>
            <begin position="8"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9070" checksum="43C27AE2DDF81A3D" modified="2018-04-25" version="1">MVVGADHPPVTGLEEALLRGGRYARVVHLGPYEGLPEVYHWLYAGGLAEAGVSPTPEPSFEIYPNTPADTPPERLVTEIYTPIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF4</accession>
    <name>A0A2M9PAF4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000940">
        <property type="protein sequence ID" value="PJN94499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7942" checksum="8C4636CA24B38519" modified="2018-04-25" version="1" fragment="single">RERAFRAGYRGEVVGENIFEGSDTDLTVLKYWLEVPDTRRVIMAPQGRGLGLGWHQDPGGKLWWVQLVGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ4</accession>
    <name>A0A2M9PAQ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000872">
        <property type="protein sequence ID" value="PJN94618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014883581" evidence="1">
        <location>
            <begin position="24"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="21300" checksum="67BF71F668401424" modified="2018-04-25" version="1" fragment="single">MSISRRAVTLGLLAVLAAAPLRAAQPDWPNTITIATGSPGGTYFAYGEALGKLLSTALGIRVITQPTDGPSENIALLEEGKADLGFVTLGVAAQAWDGTAPWTNGVEMRDFRAVFPMYDTPFHFIVRKASPAQKLGDLAGLRIGVGPEGGTGATYGPVCSRRWGSRASSRPGTGTRWRRSWRPGISTRWRWRPAPPSPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR4</accession>
    <name>A0A2M9PAR4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000858">
        <property type="protein sequence ID" value="PJN94637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="86"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11803" checksum="E19A41F5823B4F0F" modified="2018-04-25" version="1">MGDDFGDVREFVFPGERRQLQDMRRTGAVEAQAGGADLSIISQKMANTVSASTQLQKTYLPVNQSAVELADEARKRGRRRILENKAGRKVETLRPGESKLNVNGDAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW7</accession>
    <name>A0A2M9PAW7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000831">
        <property type="protein sequence ID" value="PJN94683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="48"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23743" checksum="7F09E6E16F78F289" modified="2018-04-25" version="1">MPEVIFPGPDGRLEGRYHPQKNKDAPIAIILHPHPLYGGTMNNKVVYNLHYTFHKIGFTCLRFNFRGVGRSQGEYDQGLGELSDAAAALDYLQAMNPNAKHCWVAGFSFGAWIGMQLLMRRPEIAGFVSVAPPANQYDFSFLAPCPSSGLIISGGADRVAPLADVTSLADKLKQQKGITITQATIEGASHFFDPGMDQMIGIVDDYVRRRLTETSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ7</accession>
    <name>A0A2M9PAZ7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein RecA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">recA</name>
        <name evidence="8" type="ORF">CNY89_12855</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RecA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000814">
        <property type="protein sequence ID" value="PJN94714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013765">
        <property type="entry name" value="DNA_recomb/repair_RecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020584">
        <property type="entry name" value="DNA_recomb/repair_RecA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023400">
        <property type="entry name" value="RecA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020587">
        <property type="entry name" value="RecA_monomer-monomer_interface"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45900">
        <property type="entry name" value="PTHR45900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00154">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00142">
        <property type="entry name" value="RECA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54752">
        <property type="entry name" value="SSF54752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02012">
        <property type="entry name" value="tigrfam_recA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00321">
        <property type="entry name" value="RECA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50163">
        <property type="entry name" value="RECA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RECA_2" evidence="6">
        <location>
            <begin position="1"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="RECA_3" evidence="7">
        <location>
            <begin position="114"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="258" mass="27877" checksum="42F6696B7E256A38" modified="2018-04-25" version="1" fragment="single">GGICAFVDAEHALDPTYARKLGVNIDDLLIAQPDAGEQALEITETLVRSGAVSVVVVDSVAALTPKSELEGEMGDAQVGAQARLMSQAMRKLTSAISRSNCMVIFINQIRMKIGVMFGSPETTSGGNALKFYASVRLDIRRIGAIKDRDEVVGNSTRVKVVKNKVAPPFKQVEFDIMYGEGISKRGELIDLGVKAGVVEKSGSWYSFSDQRIGQGRENAKTFLKDNPDVAWQIEDKIRAAHGLDFAMTAAEGPDVIEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC1</accession>
    <name>A0A2M9PBC1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12200</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000753">
        <property type="protein sequence ID" value="PJN94822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013517">
        <property type="entry name" value="FG-GAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011519">
        <property type="entry name" value="UnbV_ASPIC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13517">
        <property type="entry name" value="FG-GAP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07593">
        <property type="entry name" value="UnbV_ASPIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="UnbV_ASPIC" evidence="3">
        <location>
            <begin position="202"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M10_C" evidence="4">
        <location>
            <begin position="353"/>
            <end position="443"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="448" mass="47945" checksum="25A4D898CADA5FCC" modified="2018-04-25" version="1">MDIVSFDTQAKTLRIYENRGQGFDAGRTLSAGAMQHYDVATGDFDGDLVTDVLLARSGWKERLYRQNAEGGWSQAPDMPVRDTNTLALAAGDFDNDGTLDYAALQLTQTDGVSVHVYLNRGDGSFERGWTFSDPTLPGKAEYMVSGDFDRDGSLDLLLTTSYPPSPREGAYVLLEGAAGQGNWLSLGLKGAGADRGGSETGGLGARVYLTTPDGEVQLREQDGGVHVNSQNATDLHFGLGEAETADLRVVWPDGFAQIFVGVKANQHLVLTERRDGHERVFEGGAHNDRLKGSALDDLLIGREGFDLLLGQEGDDTLRGGAGNDNLFGGRGDDLLEGGRGADRMRGELGADVFRFAAVTDSLPGARQDSIRDFEAGRDRIDLAAIDADATTAGNQRFVFLEAAAFGGAAGELRFARGFLEADVDGDARADFRVELHGVTALEARDMLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC6</accession>
    <name>A0A2M9PBC6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12145</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000745">
        <property type="protein sequence ID" value="PJN94829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001761">
        <property type="entry name" value="Peripla_BP/Lac1_sug-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00532">
        <property type="entry name" value="Peripla_BP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="17982" checksum="AEA353F3C586902D" modified="2018-04-25" version="1" fragment="single">MNRRPTIVDVARKAGVSKSTVSNVLKGSPLVRSETRDQVRAAIAELDYVYNRAAANLRGGDIGLIGLVINDLRNPFFTEFAASAQLAFAARGFATVIAHSDENPEIQAQVVTTLIEHGLSALVISPTYGDTRPTFDALARAGAPTLQVLRLIDPRTDLFPFASLDYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH5</accession>
    <name>A0A2M9PBH5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000708">
        <property type="protein sequence ID" value="PJN94893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="11"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8203" checksum="DFAE2CDD6334B600" modified="2018-04-25" version="1" fragment="single">LKDAGPGGYAPVGAGATHAWAEVYVPGAGWITFDPTNRSVGGANLIPVAVVRDIRQAVPVAGSFNGPSDALIGMEVEVSVTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ8</accession>
    <name>A0A2M9PBJ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heat-shock protein Hsp20</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_11675</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the small heat shock protein (HSP20) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000704">
        <property type="protein sequence ID" value="PJN94902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06470">
        <property type="entry name" value="ACD_IbpA-B_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002068">
        <property type="entry name" value="A-crystallin/Hsp20_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037913">
        <property type="entry name" value="ACD_IbpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008978">
        <property type="entry name" value="HSP20-like_chaperone"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00011">
        <property type="entry name" value="HSP20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49764">
        <property type="entry name" value="SSF49764"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01031">
        <property type="entry name" value="SHSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="SHSP" evidence="4">
        <location>
            <begin position="27"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15512" checksum="39DF35B0906E3232" modified="2018-04-25" version="1">MTKVTFASHPYLLGFEQLDRLVERSAKSGAEGYPPCNIEQTSADSYRITLAVAGFAEDDLAVTLEANQLVIRGRRREETEGRVFLHRGIAERQFQRSFVLAEGVEVRGAKLENGLLHVDLQRAEPETVVRTIAINRGKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY8</accession>
    <name>A0A2M9PBY8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dienelactone hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000630">
        <property type="protein sequence ID" value="PJN95053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002925">
        <property type="entry name" value="Dienelactn_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01738">
        <property type="entry name" value="DLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DLH" evidence="1">
        <location>
            <begin position="85"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="32148" checksum="EEBF1544A56A4E39" modified="2018-04-25" version="1">MTRLTAKDFAPELLQLYDFYAHGRITKREFLDRAAKYATLGMTAAALLGAMRPNYALAQQVPADDPAIVTERVSYPSPDGHGEVQGYLVRPAGDPGRLPGVVVVHENRGLNPYIEDVARRLGKAGFVALAPDGLSSVGGYPGDDDKGRELQATVDPEKLMNDFFAAVDWLQANPLTTGKVGIVGFCYGGGVVNAAAVALPDLAAGVSFYGRQPRAEDVARINAPLLIHYAQLDERINEGWPAYEAALEQNGKTFDAFIYENVNHGFHNDTTPRYDEAAADLAWTRTLDWFRQHLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC13</accession>
    <name>A0A2M9PC13_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NnrU domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10675</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000621">
        <property type="protein sequence ID" value="PJN95069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009915">
        <property type="entry name" value="NnrU_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07298">
        <property type="entry name" value="NnrU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="domain" description="NnrU" evidence="2">
        <location>
            <begin position="5"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16426" checksum="9F241B178995B85F" modified="2018-04-25" version="1" fragment="single">AGPARGVVAAAIGLGLILMIVGYRSAPYVAVYTPPGWGIHLNNLMMLIAVFVFALGHSKGKSRAWLRNPMLIAVMIWAVAHLLVNGDLASLILFGGLGAWAFVDRLTINARNPDWTPKAPGTTAGDVRLVAISVVTFGIIAAIHAWLGYWPFPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC51</accession>
    <name>A0A2M9PC51_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ribosome-binding ATPase YchF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ychF</name>
        <name evidence="7" type="ORF">CNY89_10405</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. YchF/OLA1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000599">
        <property type="protein sequence ID" value="PJN95113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043023">
        <property type="term" value="F:ribosomal large subunit binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04867">
        <property type="entry name" value="TGS_YchF_OLA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01900">
        <property type="entry name" value="YchF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00944">
        <property type="entry name" value="YchF_OLA1_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004396">
        <property type="entry name" value="ATPase_YchF/OLA1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031167">
        <property type="entry name" value="G_OBG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023192">
        <property type="entry name" value="TGS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013029">
        <property type="entry name" value="YchF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041706">
        <property type="entry name" value="YchF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06071">
        <property type="entry name" value="YchF-GTPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006641">
        <property type="entry name" value="CHP00092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00092">
        <property type="entry name" value="TIGR00092"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51710">
        <property type="entry name" value="G_OBG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OBG-type G" evidence="5">
        <location>
            <begin position="3"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="TGS" evidence="6">
        <location>
            <begin position="280"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="12"/>
            <end position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="365" mass="38723" checksum="215C5222529F27DA" modified="2018-04-25" version="1">MGFKVGIVGLPNVGKSTLFNALTRTAAAQAANFPFCTIEPNVGEVNVPDGRLEKLAAIAKSKTIIPTRMTFVDIAGLVRGASKGEGLGNQFLANIRECDAVAHVLRCFEDDDVTHVEGRVDPVADAETVETELMLADLESVEKRLLGLQRKLRGGDQEAADQARLLEAAKVALEAGRPARTVKVDAEDARTWRLLQLLTGKPVLYVCNVEEGAAATGNAHSEAVAAKAAAEGAGCVVISAAIEEEIAQLEDAERAEFLADLGLEEPGLDRMIHEGYRLLGLSTYFTVGPKEARAWTIPAGATAPQAAGVIHGDFERGFIRAETIAYGDFVGLGGEQPAKEAGKMRSEGKGYKVADGDVLHFLFNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC77</accession>
    <name>A0A2M9PC77_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000579">
        <property type="protein sequence ID" value="PJN95157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7169" checksum="141F4E5A7205B607" modified="2018-04-25" version="1">MPRTRVSAAAPGLPAATLFDIHDCLVLALDATEGDQPRRWQMPEARGLIRSALRDTRRLMGEVTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC85</accession>
    <name>A0A2M9PC85_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000580">
        <property type="protein sequence ID" value="PJN95151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="17967" checksum="CFD793FBDB93E640" modified="2018-04-25" version="1">MGVLASSPAGKYAERIHVIYDAPPAGGSLAFEAELQSVAQSVFGHSLLVKPYTNTQDMLAALGSYELVVTNKLHVGIVTIAQGGKVISTPHHIKTPRLYRQLGLSDYCVPLSGLTTVALSEAFAKLPDFSPNRELIERGVELIDSVVRQVIDGVRSRTDPVRARVAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH1</accession>
    <name>A0A2M9PCH1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 18">Diacylglycerol kinase</fullName>
            <ecNumber evidence="5 18">2.7.1.107</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">CNY89_09655</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18">Catalyzes the ATP-dependent phosphorylation of sn-l,2-diacylglycerol (DAG) to phosphatidic acid. Involved in the recycling of diacylglycerol produced as a by-product during membrane-derived oligosaccharide (MDO) biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="18">
            <text>a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10272"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17815"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58608"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.107"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 18">Cell inner membrane</location>
            <topology evidence="3 18">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 18">Belongs to the bacterial diacylglycerol kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.107" evidence="5 18"/>
    <dbReference type="EMBL" id="PHNO01000538">
        <property type="protein sequence ID" value="PJN95240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004143">
        <property type="term" value="F:diacylglycerol kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006654">
        <property type="term" value="P:phosphatidic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd14264">
        <property type="entry name" value="DAGK_IM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.3610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000829">
        <property type="entry name" value="DAGK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033718">
        <property type="entry name" value="DAGK_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036945">
        <property type="entry name" value="DAGK_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34299">
        <property type="entry name" value="PTHR34299"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01219">
        <property type="entry name" value="DAGK_prokar"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01069">
        <property type="entry name" value="DAGK_PROKAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14 18" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 18" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13 18 19" id="KW-0418">Kinase</keyword>
    <keyword evidence="18" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="15" id="KW-0460">Magnesium</keyword>
    <keyword evidence="17 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 18" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 18" id="KW-0808">Transferase</keyword>
    <keyword evidence="10 18" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="16 18" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="18">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00017575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU363065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="PJN95240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11587" checksum="596398A21A454B20" modified="2018-04-25" version="1">MHLLAAGSYSAGGLRRLWKETAFRHEMLGGAAALALLLWTRASAPELLCFAVLFLALIAVEALNTAVEVIVDHLSPEWSAMARDAKNLGSLAVLCLLGANGLYLAAVLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR6</accession>
    <name>A0A2M9PCR6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09025</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000491">
        <property type="protein sequence ID" value="PJN95346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005183">
        <property type="entry name" value="DUF305"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03713">
        <property type="entry name" value="DUF305"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="DUF305" evidence="2">
        <location>
            <begin position="92"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="161" mass="17904" checksum="799DF979A8B5127A" modified="2018-04-25" version="1">MNYGRFFAMIATSTVVMFGLMYLNTYALDHIFFSQTRMWMAIYMGAVMAIIMLAFMLGMYSNKKVDFAIFAGAAAAFALSLWLVRSQETVDDLAWMRAMIPHHSIAILTSERANISDPRVRALADAIIEAQLSEIAEMKSYIADIEANGEAPAGTPRAEIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY2</accession>
    <name>A0A2M9PCY2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH lacI-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000478">
        <property type="protein sequence ID" value="PJN95374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11991" checksum="3F61CD168381CBA8" modified="2018-04-25" version="1">MRKTATIQDVARLAGVSTATVSRVLSSPGVVAEASLTRLLPAADRTWWLLIGRSPWGWSARWPQRAGPARKCEAGDAAAARQGRPGGRLRLRGSRASRHGQRSRQGPRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ3</accession>
    <name>A0A2M9PCZ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_08625</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the purine-cytosine permease (2.A.39) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000460">
        <property type="protein sequence ID" value="PJN95416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001248">
        <property type="entry name" value="Pur-cyt_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045225">
        <property type="entry name" value="Uracil/uridine/allantoin_perm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30618">
        <property type="entry name" value="PTHR30618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02133">
        <property type="entry name" value="Transp_cyt_pur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="87"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="196"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="238"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="283"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="311"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="359"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="384"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="448"/>
            <end position="476"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="476" mass="51066" checksum="3261699DEBC02AD6" modified="2018-04-25" version="1" fragment="single">VAGFIVMALVNLTGRPSVKYGVPYPVMARVAMGVHGAKFPALVRGIVAIFWYGVQTYFASTAVALLIDALTGSTGGATFLGMTGVDWISYVIVCVFQVGLFMMGIDWVGKFLNWAGPFVYAVMIALLAVIWWKAGGALLTEVGNIFQAPGETERSTIGGFIAVVGTMIAYFAAVIINFGDFSRFVTTEKAMRKGNFWGLPVSIALFSFIALFITAGTVVIFGERLINPADIVARVDNIWLTIIAAITFFAATVGINLVANFIPPAYDIANLAPSKISAKMGGIITAVIAFFIGALWVSAISNIGIAKFVDTLGAVLAPLYGILVADYYLIRKQRVNLQELFVSDPTGAYYYDNGWNKKAMQAFGMAAVFSIATVWIPALESLAGFGWIIGAALGAGFHVWLMRGTATWRRRSASTEFETAGDMRAWTPEQREESCSLFVLIGTVSQQVGTGRPPERSVLQGAVPHANRTASSDSQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ8</accession>
    <name>A0A2M9PCZ8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Type-5 uracil-DNA glycosylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_08750</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="8">Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 5 (UDGb) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000471">
        <property type="protein sequence ID" value="PJN95394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033958">
        <property type="term" value="F:DNA-deoxyinosine glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004844">
        <property type="term" value="F:uracil DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd10031">
        <property type="entry name" value="UDG-F5_TTUDGB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044147">
        <property type="entry name" value="UdgB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="7" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="10">
        <location>
            <begin position="1"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="18311" checksum="CAACB6A387E63E92" modified="2018-04-25" version="1" fragment="single">RVLVLGLAPGVTGANRTGRPFTGDYAGQLLYATLTRFGFANGRFAADPADGLELHDCLVSNAVRCVPPQNKPTPAEIATCRAFLIGRMEAMPRLAAVVCLGRIAHETLLRTLGARLADHPFAHGARHEVGKLAIFDSYHCSRYNTNTGRLTPEMFEAVFSALRGYIDAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD12</accession>
    <name>A0A2M9PD12_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Aldehyde-activating protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Gfa family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000462">
        <property type="protein sequence ID" value="PJN95413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016846">
        <property type="term" value="F:carbon-sulfur lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006913">
        <property type="entry name" value="CENP-V/GFA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51891">
        <property type="entry name" value="CENP_V_GFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CENP-V/GFA" evidence="3">
        <location>
            <begin position="4"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005495"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4075" checksum="0143842CD230F853" modified="2018-04-25" version="1" fragment="single">MDQFTGGCLCGKVRIVASGRPYRVGLCHCLDCRKHHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD56</accession>
    <name>A0A2M9PD56_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptidase_A24 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08380</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the peptidase A24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000444">
        <property type="protein sequence ID" value="PJN95454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014032">
        <property type="entry name" value="Peptidase_A24A_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000045">
        <property type="entry name" value="Prepilin_IV_endopep_pep"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01478">
        <property type="entry name" value="Peptidase_A24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00864">
        <property type="entry name" value="PREPILNPTASE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="129"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_A24" evidence="4">
        <location>
            <begin position="7"/>
            <end position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15842" checksum="9449ED181E1160C9" modified="2018-04-25" version="1">MSIAAGLFLAAMLAAISAIDWRTHRIPDRLSLPLTACGLAWNYGWGPGPFSDYLIGAGFGYASLALFGTLYFRLRGQDGLGLGDAKLFAAAGAWLGWRALPFVLLAASLAGLLFALITRRLAPVPGNRPIAFGPWISLAILLLWLLDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD57</accession>
    <name>A0A2M9PD57_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000435">
        <property type="protein sequence ID" value="PJN95479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="88"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="29022" checksum="10247EE77D803FD4" modified="2018-04-25" version="1">MVMGRFDLTDFEWSVIQPLLPTKVRGVPRADDRKVLNGIFWRLRTGAPWADIPARYGPYTTCVNRFNRWRRAGHWARILQAVSEAYDGDVQMIDSSSIRVHQHGANGEKGGRSDCMGRSRGGLTTKIHALVDATGRPILLKLTAGQAHDGRSAADMLGSVGPGQTLLADRGYDADYLRDPLVTRGALPNIKPMPNRKRIPAFDRALYRQRNRVERFFNKLKHFRAVATRYDKRDDNFLASVHLAAIRICLRQNESVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD73</accession>
    <name>A0A2M9PD73_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000430">
        <property type="protein sequence ID" value="PJN95489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="289" mass="31500" checksum="683CA70910FA1D04" modified="2018-04-25" version="1">MRLVVAIATLGRRAQVARLVEFLARQSRLPDAVVLSAPDPSHVAWPEGTPFPVRAVFGPTGSSVQRNTALDAVGADFDVVTFLDDDFVPAHDYLAGVVEAFAGDPGFAVVMGRVIRDGASTAGLDWPEALAALEAPDPRPPDREVIDHVGAYGCNMSIRAGMIGDLRFDERLVLYGWQEDIDFTSRLRARGRVVCVPGLRGVHLGLKAGRVNGRKFGYSQVVNPVYLIRKRSVPAGFALRLMARNLAANLVRSLHPEPYVDRRGRLRGNLLGLAHVLRGRIEPEHALHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD82</accession>
    <name>A0A2M9PD82_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyrroline-5-carboxylate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000427">
        <property type="protein sequence ID" value="PJN95496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007475">
        <property type="entry name" value="UbiK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04380">
        <property type="entry name" value="BMFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9960" checksum="361D0835103AF6B6" modified="2018-04-25" version="1">MQTRSKIFDDISQLMTNAMGVAQGARTEAETAVKGLVDRWLAERNLVTREEFEAVREMAVRAREENEALKARLDALEPSPVSEGFPPVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK9</accession>
    <name>A0A2M9PDK9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RP-C_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07325</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000368">
        <property type="protein sequence ID" value="PJN95630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005090">
        <property type="entry name" value="Rep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021760">
        <property type="entry name" value="RP-C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03428">
        <property type="entry name" value="RP-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11800">
        <property type="entry name" value="RP-C_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RP-C_C" evidence="2">
        <location>
            <begin position="269"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="363"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="367"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="385" mass="41904" checksum="B8AC98892425D92A" modified="2018-04-25" version="1">MHVEKSSEPGLSQGELHRILRLAAAAHGLPDAVLVTGHALLRYVPRDATEPISPARVQDLAEERGCDPRTIRNHIRRLEAYGLVVDRAAGGGRRMIQRRRGRLLVLQGIDFSPMLAAADALALAAIEAAAERDERRQLCARISELKRQLRHAIAVQERGGVEARATSALRACPARHRGLSLRELVALAARLELAAKVLMDSEDSAGGRIFSSDRSDEEIRPNTTEKDENPVCRAQVADRAVVAADRMEPVSLERLLPALPFDWRIRIRSDDVASWPILIGIACERAGEIGVTEAIWAEAQSVLGPEGAAVLVLIADADSVDRGGSIRCPAAWVRAMAARAGTEPLCLCRNIFGLRRRRRDTGDAAPCPPEFSPPQPILRRPCPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL2</accession>
    <name>A0A2M9PDL2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000361">
        <property type="protein sequence ID" value="PJN95647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7613" checksum="5FBE3DA56DDE85A9" modified="2018-04-25" version="1" fragment="single">LGGVVEVTTVLADSTYGVSWSERGGPDVAPPAQLGFGTLMADRAAQQLGGRISRSWDAGGLCLDLSLPVDLLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE24</accession>
    <name>A0A2M9PE24_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06445</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000304">
        <property type="protein sequence ID" value="PJN95791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11276" checksum="4CA440A26A09F9C2" modified="2018-04-25" version="1">MFRLRHVVHLMTNAVIVGSLLVFVLVMGWVSFLPIAAAVVLGFALSWPASILVARMIKADDPAWNEARGRPVQAEFEERLEHGRDPLRPEPPNPLETRPQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE49</accession>
    <name>A0A2M9PE49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000291">
        <property type="protein sequence ID" value="PJN95825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPD_transp_1_N" evidence="2">
        <location>
            <begin position="4"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13095" checksum="718AA2E3CF96C386" modified="2018-04-25" version="1" fragment="single">MWMKILQRLFLLCVMMLIVSVAAFLAPVASGGDPARAILMAHTGDPNLDPAAVEALKVELGLDRPMVEQYFVWLGNAVQGDFGRSFASKQPVMGEIARALSVSVTLRCRALAIAIAAALPLGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA0</accession>
    <name>A0A2M9PEA0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Imidazoleglycerol-phosphate dehydratase</fullName>
            <shortName evidence="5">IGPD</shortName>
            <ecNumber evidence="5 6">4.2.1.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hisB</name>
        <name evidence="7" type="ORF">CNY89_05935</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O</text>
            <dbReference type="Rhea" id="RHEA:11040"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:57766"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="EC" id="4.2.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 6/9.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the imidazoleglycerol-phosphate dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.19" evidence="5 6"/>
    <dbReference type="EMBL" id="PHNO01000276">
        <property type="protein sequence ID" value="PJN95875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00011"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004424">
        <property type="term" value="F:imidazoleglycerol-phosphate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07914">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.40">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00076">
        <property type="entry name" value="HisB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038494">
        <property type="entry name" value="IGPD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000807">
        <property type="entry name" value="ImidazoleglycerolP_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020565">
        <property type="entry name" value="ImidazoleglycerP_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23133">
        <property type="entry name" value="PTHR23133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00475">
        <property type="entry name" value="IGPD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00954">
        <property type="entry name" value="IGP_DEHYDRATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00955">
        <property type="entry name" value="IGP_DEHYDRATASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="4 5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000599"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="197" mass="21492" checksum="9155BC272F744957" modified="2018-04-25" version="1">MREAEFRRETAETAIQIRVNLDGTGRRNVSTGVGFFDHMLDQLARHSMIDMEIEARGDLHIDDHHTVEDVGIALGRTLAEALGDKRGIRRYGSCHLAMDETLVRAALDLSGRPFLVWKVDFPTPKIGSFDTELVREFFTALAMNGGITLNLALLDGANSHHIAEACFKAVAQALRAAVEPDPRAEGAVPSTKGTLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC8</accession>
    <name>A0A2M9PEC8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000277">
        <property type="protein sequence ID" value="PJN95872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="22"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="23737" checksum="07F843F26D938FCD" modified="2018-04-25" version="1">MEVADMTLLPVRLGAAFEPHQHEGEDAHAEDDHDAHGHAETEHAEDAHHDHDEHGAVDAHIWLDPANATRIAAAVAAKLAEIDPGNAAAYQANAEAVAARNADLAAEIAATLAPAQGKGFLVFHDAYQYFERAFDLPAAGSISTTDGEAPSPGRVSALRARILDDQIVCIFTEPQFEPKLVGTLVEGTPLRVGALDPEGTGLPLGPDLYPGLMRNLAGALEGCLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE6</accession>
    <name>A0A2M9PEE6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000270">
        <property type="protein sequence ID" value="PJN95888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="37976" checksum="0B61EB0DCC08473C" modified="2018-04-25" version="1">MKIETPRETFVTALPARRRLFLSWCDFSRRIASLDEHYGFEMHYVPSPVLKKWQKPFGYLYQFAKSAKILLTRRPEEVWLHCPPTFLPHLALMLRPFAGRYRIVADYHSGATSAKWNWVPGAIWAVNHCDLILLHNEEAIPQAEALGVQMDKTVMLEDPPPTRMAPAGGTQIAADRPPYVLAPCSFNPDEPIPLLLDAARLAPEIPILITGSKRRADLLGFTRDVPSNVTFTDYLPLDEFERLLFGASVVFGLTAVEGIQLSVANEALGADKALVLSDTAILRSMFGAAAVLAKNTPEALAAGLREGIARREELEAKSRALKEQRIQDWLGPAETVTRRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG9</accession>
    <name>A0A2M9PEG9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrogen fixation protein FixH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000260">
        <property type="protein sequence ID" value="PJN95912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008620">
        <property type="entry name" value="FixH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05751">
        <property type="entry name" value="FixH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14353" checksum="EE98634CAF87FB91" modified="2018-04-25" version="1" fragment="single">MSAARPLTGRKVLAISAGIFGVVLAANLTLTYFAINTFSGLVVENSYVSSQTFDRDRHAQEALGWTLRVVEKDDVMRLQITDAQGRAVHPPTIKVVVGRPTMARSDRELELHATPEGYAAEAPLEPDRYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP2</accession>
    <name>A0A2M9PEP2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HDc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000231">
        <property type="protein sequence ID" value="PJN95998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HDc" evidence="1">
        <location>
            <begin position="48"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="21136" checksum="BF4EF9C614E34265" modified="2018-04-25" version="1">MAKRAWQRMLSGRRLDLLDPSPLDVEIEDIAHGLAFVARWNGQTRGAHPFSVAEHSLIVEDLYARLSPGCPPRWRLAALLHDAPEYVIGDMISPVKSAIGPGYATLDERLARAVHLRFGLPASLPAPVKALIKRADRLSAWLEAVRIAGFGEAEANRLFGTPHLPGLAEAELPLRPPLEVKAAFLARHAALMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP8</accession>
    <name>A0A2M9PEP8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000228">
        <property type="protein sequence ID" value="PJN96008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1254" evidence="2">
        <location>
            <begin position="97"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="1">
        <location>
            <begin position="409"/>
            <end position="517"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="535" mass="58095" checksum="7076D08DD0678E77" modified="2018-04-25" version="1">MIRLATISSLALAVGLGPVWAEIPAAVIESLSAPARVETKIGPLEFKDGVPSAETAARVYDTLDFTNALDVYNNSFRGASAYALRKSFEDLAGANGVVIFSELMDSRSLFLTANADTVYYLSAIDLSDGPMVIEQPTDAVGTINDMWFSWVVDVGGPGPDRGLGGKYLIVPPGYDGPLPEGGYFVAHSRTDHVLYAARAYLVNDDPKPAVENVKANLKIYPYVPGGYGASIAQALTGAVRLSGEPKIPEMRFVEASDLAFNTISPGDAGFFDMIDANVQAEPATSYDVELAGQLAAIGIVHGKDFAPDARMKGILAEAAAVGDAAGRALQWRWRDRRPDWAIYENSQWWSMLWEGGADFETPPPLFEDGVFKPLPPTGARTLDSRTAFYYGYTLDSPGMIMRIPGVGSQYLMAGLDARGEPFDGAKTYRVTLPKDIPAEAFWSLTLYDNQTRSMLQTPQKYPRAGSQSYPSPAAEAAADGSTTVWFAPEQPEGVARGNWIQTDPEKGWFTILRLYSPLPSFFDQSWRPSEIEMAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER9</accession>
    <name>A0A2M9PER9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Asp/Glu/hydantoin racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000220">
        <property type="protein sequence ID" value="PJN96028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036361">
        <property type="term" value="F:racemase activity, acting on amino acids and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="255" mass="26516" checksum="D46DE02C6D90E368" modified="2018-04-25" version="1">MRIKVINPNTTASMTAKIGAAARSVAAPGTEIIAVNPENGPVSIECHYDEAVSGMALLEEIRRGEAEGVDGYVIACFGDPGLLAAREVATGPVLGIAEAAMHAASFISTGFSVVTTLGRTKIIAEHLTHAYGMSHFCRAIRACELEVLALEDEGSDARRIITEECLRARDEDGSGAIVLGCGGMADLAKAIEADVGIPVIDGVTIATKMVEALVGCGLRTSKHGDLAYPGPKPYSGAFSAWAPKPVSPTRKRVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV7</accession>
    <name>A0A2M9PEV7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000206">
        <property type="protein sequence ID" value="PJN96071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007396">
        <property type="entry name" value="TR_PAI2-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35802">
        <property type="entry name" value="PTHR35802"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04299">
        <property type="entry name" value="FMN_bind_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15361" checksum="B322CA5A268F19D0" modified="2018-04-25" version="1" fragment="single">MYVPPAFRIEDLAEIQASMRSARLAQVVTLGTGGLAATPLPLLLDPDEGAFGTLYGHLAWANPQWREAAPGGEALAIFMGPDAYVTPAWYEAKAETGKVVPTWNYETIQARGPAEFFDDPDRLHAVVTRLTDRHEAARAEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX5</accession>
    <name>A0A2M9PEX5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">3-dehydroquinate dehydratase</fullName>
            <shortName evidence="8">3-dehydroquinase</shortName>
            <ecNumber evidence="6 8">4.2.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Type II DHQase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">aroQ</name>
        <name evidence="11" type="ORF">CNY89_04475</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Catalyzes a trans-dehydration via an enolate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="6 8"/>
    <dbReference type="EMBL" id="PHNO01000193">
        <property type="protein sequence ID" value="PJN96110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00466">
        <property type="entry name" value="DHQase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00169">
        <property type="entry name" value="AroQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018509">
        <property type="entry name" value="DHquinase_II_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21272">
        <property type="entry name" value="PTHR21272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001399">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01029">
        <property type="entry name" value="DEHYDROQUINASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8 9">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8 10">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16591" checksum="07B977412BE9E35E" modified="2018-04-25" version="1">MSAPEILVLNGPNLNMLGVRDPTLYGGARLGDVERMMRARAEAKGFALDFRQSSHEGVLVDWIHEAHGRVAGVVINPAAYTQTSLAIADALGILACPVIELHFANVHRDPAKANRQVSLVRPVATGFVAGLGPSGYLLALDAVALAIAPVDFTEGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF70</accession>
    <name>A0A2M9PF70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04360</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000187">
        <property type="protein sequence ID" value="PJN96134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017039">
        <property type="entry name" value="Virul_fac_BrkB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30213">
        <property type="entry name" value="PTHR30213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03631">
        <property type="entry name" value="Virul_fac_BrkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF035875">
        <property type="entry name" value="RNase_BN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00765">
        <property type="entry name" value="yihY_not_rbn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="140"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="215"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="249"/>
            <end position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="31577" checksum="CA1E6B43FC726A2D" modified="2018-04-25" version="1">MNRPMNRAASQAWRFVRALWDAFERFNLNDGWPMAGFIAFSGLLSIFPFLIFAATLTGMIVGEARSAQIIDALFNIAPEHVARTLEPVIVEVLAKQSGGILTLSAVFAIYVASNAVEAFRIAFDRAYAVADPRGIIQNRILAIFIVFVGAIVAALLGLLIIFSPLFMLMAESFANRRIPLVSGYMTYGFGILVFSGFVLLMHLTLPGRSIALKRLWPGVLVSTAVWLAAAGGFTYYLRYTPTYTVTYGTLAGVIITLMFFYLTGATIIYGAEVNAALHRLSPPSKTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA7</accession>
    <name>A0A2M9PFA7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DDE_Tnp_IS66_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000164">
        <property type="protein sequence ID" value="PJN96216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039552">
        <property type="entry name" value="IS66_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13817">
        <property type="entry name" value="DDE_Tnp_IS66_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66_C" evidence="1">
        <location>
            <begin position="5"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5629" checksum="D5077437F6985357" modified="2018-04-25" version="1">MYRPISTAKLNDVDPQTWLADVLGRIAGAPMTRLDNLLPWNWGPIAPSQAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD0</accession>
    <name>A0A2M9PFD0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ubiquinone-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04005</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ribosome association toxin RatA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000169">
        <property type="protein sequence ID" value="PJN96194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048039">
        <property type="term" value="F:ubiquinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045333">
        <property type="term" value="P:cellular respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07813">
        <property type="entry name" value="COQ10p_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044996">
        <property type="entry name" value="COQ10-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005031">
        <property type="entry name" value="COQ10_START"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12901">
        <property type="entry name" value="PTHR12901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03364">
        <property type="entry name" value="Polyketide_cyc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Polyketide_cyc" evidence="2">
        <location>
            <begin position="10"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="17753" checksum="A560DBE5BA1C821B" modified="2018-04-25" version="1">MPTHSEVRVMPYSAEQMFDLIADVDRYPEFLPWCGAARMRSRKPLPDGAGEVLEADLVISFKVFRERFGSRVTLRPEARTIDVEYLDGPFRYLTNQWKFKPLGPAQCEVDFFVDFEFRSAILQKVIGLVFHEAMQRVVRAFERRAEALYGARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE2</accession>
    <name>A0A2M9PFE2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Quinone oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000154">
        <property type="protein sequence ID" value="PJN96251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17126" checksum="BBDA1C5EECEF374E" modified="2018-04-25" version="1" fragment="single">GVRAIGTAGGPEKVALALAHGYAHAIDYRAGGFAPRVRELTGGEGVHAVYDSVGRDTWRGSLASLRTRGAFVCFGQSSGMIEGFSLADLAKGSFTACRPVLFHYIAEPRELRRRADDLLDLVAAGVIRAEIRQRRPLSEAAEAHRDLEARRTTGATVLVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU1</accession>
    <name>A0A2M9PFU1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Outer membrane protein assembly factor BamA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">bamA</name>
        <name evidence="5" type="ORF">CNY89_02715</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000105">
        <property type="protein sequence ID" value="PJN96411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071709">
        <property type="term" value="P:membrane assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010827">
        <property type="entry name" value="BamA/TamA_POTRA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023707">
        <property type="entry name" value="OM_assembly_BamA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034746">
        <property type="entry name" value="POTRA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="PTHR12815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815:SF23">
        <property type="entry name" value="PTHR12815:SF23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07244">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03303">
        <property type="entry name" value="OM_YaeT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51779">
        <property type="entry name" value="POTRA"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1134">Transmembrane beta strand</keyword>
    <feature type="domain" description="POTRA" evidence="4">
        <location>
            <begin position="37"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="POTRA" evidence="4">
        <location>
            <begin position="105"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="POTRA" evidence="4">
        <location>
            <begin position="359"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="520" mass="58045" checksum="1D47F3D35E0FE24F" modified="2018-04-25" version="1">MGQHQVMRRISRAIGQAALAGGLVAALHASMALGQTVTFSRIDVAGNQRIEGDTIRVFSGIEPGQPVSPEQMNLAVRRLFDTGLFEDVTVMPEAGRLLITVKENPSINQIAFEGNRSLDDEKLGAVVELRSRQAFSVAAAEADAQRIIEAYRAAGRYGASVTPVIIRRPENRVDLVFQVVEGRPTRVQRVNFIGNEVFSDSRLRRAVGTSQANILSSIFGSGNYDQDKLELDREMLRQFYLERGYVDFQVRSATAEIARERNGFFVTFVVSEGPRYDFGEIGVASSVPGLNAAAFEPLLQPLLGNGVYNAKLVERVVERINFQAGQSGYAFLEVRPRITRNEQDRTVDIVFELVQGERVFIERIDITGNNRTLDRVIRRQFDVVEGDAFNSREIRDAENRIRALDFFETVEVKTEQGAAPSRAIVGVAVTEKPTGSLNLGGSFSSSEMAPGRLVHLTERHTHEHAHPPLEHDHWHSHDLHHRHDHAPPVPAGVRHRHPHRHAALVHSHAHYPDAHHRHVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG07</accession>
    <name>A0A2M9PG07_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_02480</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000094">
        <property type="protein sequence ID" value="PJN96452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="161"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="213"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="274"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="305" mass="33664" checksum="E934C885A3BC0043" modified="2018-04-25" version="1">MTDRKPFRWHILVFLAPAVLVYTAIMIVPLFATLNLSLFRTLEGVRSFAGLDNFRTLFGDPRWSTSFWNALGNNAWFFLIHMLVQNPIGVALAALLSSPTLRGAAFYRTAIFIPTILSFVIVGFVWKLILSPIWGIAPGMLASVGLKSLFAPWLGQEATALTTLALISVWQFVGIPMMLIYAALLSIPDEVIEAAEIDGLTGWAQFWKIKLPLILPSIGIISILTFVGNFNAFDLIYVSQGALAGPNFATDILGTFLYRTFFGFQLQIGDPHMGATIATAMFGVILAGVGVYLFAIQTRLRRYQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG08</accession>
    <name>A0A2M9PG08_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_02320</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000087">
        <property type="protein sequence ID" value="PJN96476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="36"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="11960" checksum="033B7EF9F129DC7C" modified="2018-04-25" version="1" fragment="single">MDLDPAFFAVAIPAVVFAGLSKGGFGAGAGFASTPILALVLPPAQAVGLMLPIFMLMDLAGLRAYWRQWSWPEARALMIGGIPGVALGWLLFRSVSPDGIRLTVGGIAVGFVGFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG10</accession>
    <name>A0A2M9PG10_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02465</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000094">
        <property type="protein sequence ID" value="PJN96449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="269" mass="29004" checksum="0101430ABA891D5C" modified="2018-04-25" version="1" fragment="single">MGNLTLKSVTKSFGKTDVIQGVDLEVRDGEFCVFVGPSGCGKSTLLRMIAGLEDTSSGDILIDGRRVNNAAPAEREIAMVFQSYALYPHLTVRDNMGLGLKQAGTPRAEIDSRIANAARMLSLDPLLTRRPAELSGGQRQRVAIGRAIVRTPKLFLFDEPLSNLDAALRVNTRIEIARLHRQLAATMIYVTHDQVEAMTLADKIVVLNAGRIEQVGAPMELYNDPANTFVAGFIGSPQMNFLKAGPLGAPGATLGVRPEHLEISREAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG18</accession>
    <name>A0A2M9PG18_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000081">
        <property type="protein sequence ID" value="PJN96495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="302" mass="33077" checksum="0F55415D1F5341A8" modified="2018-04-25" version="1">MDRLTEMEAFVTVVDHGGFTEAARQMGLSKSAVSKHVAALETRLSVRLLNRTTRRVSPTELGLAYYDRARQVLDQTLEADAMVTAMQSAPRGSLRVSAPVSFGMGHLSRAVAKFLGACPEVDVNMTLDDRFVEVVAEGFDVAIRIGRLEDSSLKARKLAEARRLLAASPDYVARMGTPRSFEDLGAHRLLHYSHLSTGNFWRLRSASGEERHIRVGGRLTVNNGDSLMAAAEAGLGIALLPSFILGSALEDGRLVEVLADRPPDLLGIHALYPQSQFPQPKLRAFIDFLVEHFRGKGPDGWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG28</accession>
    <name>A0A2M9PG28_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Succinate dehydrogenase iron-sulfur subunit</fullName>
            <ecNumber evidence="10">1.3.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_02355</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a quinone + succinate = a quinol + fumarate</text>
            <dbReference type="Rhea" id="RHEA:40523"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="10">Binds 1 [2Fe-2S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
        <text evidence="10">Binds 1 [3Fe-4S] cluster.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="10">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (bacterial route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur, cytochrome b-556, and a hydrophobic anchor protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.1" evidence="10"/>
    <dbReference type="EMBL" id="PHNO01000089">
        <property type="protein sequence ID" value="PJN96469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008177">
        <property type="term" value="F:succinate dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004489">
        <property type="entry name" value="Succ_DH/fum_Rdtase_Fe-S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025192">
        <property type="entry name" value="Succ_DH/fum_Rdtase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13085">
        <property type="entry name" value="Fer2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00384">
        <property type="entry name" value="dhsB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="9 10" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7 10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="11">
        <location>
            <begin position="29"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="12">
        <location>
            <begin position="159"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022131"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="258" mass="29283" checksum="98815A54453106FD" modified="2018-04-25" version="1">MVEFTLPKNSRVVTGKTWPKPAGGNVRAFKIYRYNPDTPENPRIDTYFVDLDACGPMILDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLVPDLTHFYAQQASVKPWLETSSNTPAKEWKQSIEDRKKLDGLYECIMCACCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDELEDPFKLYRCHTIMNCAKTCPKGLNPAKAIGSIKQLMVERRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG42</accession>
    <name>A0A2M9PG42_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000077">
        <property type="protein sequence ID" value="PJN96508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="10160" checksum="09B69188C72931D0" modified="2018-04-25" version="1">MPLIAKIEHYEDRARFCLEEAIFDMRRGNFYDGAGPMLEELKATVDMLYDVYEVLYDSMPWNDPANPDDHPSAVTLPRYAPQPAALPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG84</accession>
    <name>A0A2M9PG84_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000065">
        <property type="protein sequence ID" value="PJN96563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22113" checksum="E0C0DF6090FAFF89" modified="2018-04-25" version="1">MRSLHPSLFLLALLLNVAVIRLGSYLLPDRLYFSFSSFLFDNRDLVKPLALSIKLLTPFVAAFALTGVVMLLARGQSAAGAGKPGADLQAILTDQLPITLAYAAFFAALLMAWPYILLWDLLIDPAFARYRLLFLLAYFAYFTAYAFFALAGANTARALLTPDPGRPPLTWSTLTTHPLTQPLFNAVGGAVSAAVAAFLATRIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA0</accession>
    <name>A0A2M9PGA0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putrescine ABC transporter permease PotI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01840</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000067">
        <property type="protein sequence ID" value="PJN96556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="60"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="28443" checksum="C155275D986FCA3C" modified="2018-04-25" version="1">MRSGRIMLIFCVLGFVFLYAPILSLVIFSFNASQLVTVWGGFSTKWYAALLQNREILAAAGISLQVATVAATVSVALGTLAAYVLTRFGRFRTRALLTGMSTAPLVMPEVITGLSLLLLFVSMEQLIGWPAGRGKITIMIAHITFCMAYVTVVVQSRLASFDMSLEEAAMDLGARPVRVFFDITLPVIAPALVAGWLLAFTLSLDDLVVASFVTGPGASTLPMVIFSKVRLGVSPEVNALASIIIGIVALGVIVATLRIRKGMKNGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE1</accession>
    <name>A0A2M9PGE1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cell shape-determining protein MreB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mreB</name>
        <name evidence="3" type="ORF">CNY89_01635</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Forms polymers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="2">Membrane-associated.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the FtsA/MreB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000059">
        <property type="protein sequence ID" value="PJN96592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd10225">
        <property type="entry name" value="MreB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02207">
        <property type="entry name" value="MreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004753">
        <property type="entry name" value="MreB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01652">
        <property type="entry name" value="SHAPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00904">
        <property type="entry name" value="mreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0133">Cell shape</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="16"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="162"/>
            <end position="164"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="210"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="292"/>
            <end position="295"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="346" mass="36757" checksum="FE0E9ED06E4F577E" modified="2018-04-25" version="1">MFGRWFSSDMAIDLGTANTLVYVRGKGIVLNEPSVVAYHLKDGKKRVLAVGEEAKLMLGRTPGSIQAIRPMRDGVIADFDVAEEMIKHFINKVHRRGGWSKPKIICCVPHGATPVEKRAIRDSMMAAGARQAGLIAEPIAAAIGAGMPITEATGNMVVDIGGGTTEVAVLSLGDVVYARSVRVGGDRMDEAIINYLRRHHNLLIGEATAERIKTEIGTARMPDDGYGARMEVRGRDLLNGVPKEMEITQGQIAEALGETVQTIVEAVITALEQTPPDLAADIVDRGVMLTGGGALLGDIDAALRENTGLAISIAEEPLNCVAIGTGKSLEFETQLAHVIDFGSGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH9</accession>
    <name>A0A2M9PGH9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000042">
        <property type="protein sequence ID" value="PJN96657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014728401" evidence="1">
        <location>
            <begin position="24"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="29"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="354" mass="38143" checksum="06C263BC404D5060" modified="2018-04-25" version="1">MKFRMLAATAAMGLVLLAGQGFAQEKGLVGIAMPTKSSARWIDDGNNMVKQLQEAGYETDLQYAEDDIPNQLAQIENMITKGANVLVIASIDGTTLTNALENAAAADIPVIAYDRLIRGSENVSYYATFDNFQVGVLQATSLVDGLKERFPDTKPWNVELFGGSPDDNNAFFFYNGAMSVLQPLIDDGSIVIGSGQMGMEKVGTLRWDGAVAQSRMDNLLSANYTDKQVHGVLSPYDGLSIGILSSLKGVGYGSGDMKMPIVTGQDAEVQSVKSIEAGEQYSTVFKDTRELARVTVGMVDAVLSGSQPEINDEKTYDNGVKIVPSYLLKPVAVDGSNWEEILVTSGYYTPDQLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX3</accession>
    <name>A0A2M9PGX3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tricarboxylate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000016">
        <property type="protein sequence ID" value="PJN96781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002823">
        <property type="entry name" value="DUF112_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01970">
        <property type="entry name" value="TctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="356"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="386"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="433"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="464"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="504"/>
            <end position="524"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="530"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="576"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="617"/>
            <end position="636"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="648" mass="66756" checksum="DF4DE0265B24844F" modified="2018-04-25" version="1">MFDIALSALGQVMSAPHLAFLFLGVLVGLVVGILPGLGGIAGMSILLPFLYGMEPGAALGMLIGMVAVIPTGDTFTSVMMGIPGSSASQATVLDGFPLAKRGEAARALSAAFTSSLLGGVFGAAVLSVAILMARPLILSFSSAELFMLTIFGLSMVAVLSGRSLAKGVAAAGLGLVLGSIGTAPATGEARMVMGVDYLYDGLPLVVVAMGLFAIPEIIDLLKRNRAIAESTSIGGGWGKGVGDVLRHPWLVARCSSLGCVIGALPGLGGSVVDWIAYSHVVQTSRDKSQFGKGDIRGVIAPESANNACQGGALIPTLLFGVPGSGSMAVFLGGMVLLGIQPGVTMVETRLDLTYTIIWSLALANVLGAGLCVLLARYVAKLTQVPFVYLAPFMIMITFFAAFQASRSMMDLVALIAMGGFGLYMRRFGWPRPALLIGFVLAPGAESYLYQAVQFYDWNWVTRPGVLIIGAITVVSVVLGLRYGTAISSEGETDAAAEATRPRQLIFAGAVLATAVYCLADAAGLSFLAQVFPLAIGALALGSALLVLLHLGRGASSAIHDDDAAASLAGQWSGREAYLAAFAALVAGIWLVGFVPAMAVFFPAFLIVAGKASLPRTAILTAGALAFILGITWAMNLRLPEGMIWSLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH33</accession>
    <name>A0A2M9PH33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000005">
        <property type="protein sequence ID" value="PJN96846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="5"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="252"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="310"/>
            <end position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="431" mass="43436" checksum="7970212B6CE84CB4" modified="2018-04-25" version="1">MGSEMPTASISVRRYTGPLLAPDLLSGQNTLLLSTFTSPTTGTLADNEGTLSNADSGISRFNGNALTYVGSGTVQAGIRVAGILVPTGAAVDVVVFQAGGQTYFHFPDGQPGVLAAVAMIVTIDSDPYEVFPNPYLGDAAANTFNGDAFNNIMTGEGGNDVINGGGGDDRIDGGVGNDTLRGNDGIDAILGGDGNDTIFGDAGNDVIDGGSGDDVISGGQGYDRLTGGIGNDTISGNSHGDQIFGGDGNDVLTGGDRDDGLYGGNGDDTLYGDDPANPLYTGDDRLYGDGGADRLFGGLGDDLLNGGSGNDTLEGGFDDDQLTGGSGNDTLRGNEGTDVLDGGSGNDALSGGTGADRFVFNAGRDQITDFANEDAIWLDNPLPAGTTAQDVIEDYGTITGGNAVFDFGGGNVLTVRGVTNLATLLDDIFVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH71</accession>
    <name>A0A2M9PH71_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aminotran_1_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00005</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BioY family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015225">
        <property type="term" value="F:biotin transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003784">
        <property type="entry name" value="BioY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34295">
        <property type="entry name" value="PTHR34295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02632">
        <property type="entry name" value="BioY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="95"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Aminotran_1_2" evidence="3">
        <location>
            <begin position="114"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22811" checksum="D5B8B5444FB0C711" modified="2018-04-25" version="1" fragment="single">MTLPASAASRPISPLRLEDRSRGVRLLAVVAGTAILALASRVEVPMVPVPVTLQTLAVTLIGALYGWRLGAITVLAWLGQAAVGLPVLASGKFGLAPFVGPTAGYLFAFPLAAALTGRERMVVFCSPHNPGGRIWSVAEQRALAEFCVTHDLLLVSDEVHHDLLMPGETHVPMAVAAPEVADRRIFRAALACRASMHRIVRRRAASSFQSHTANG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH84</accession>
    <name>A0A2M9PH84_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23988" checksum="BC85A16CF0CFA625" modified="2018-04-25" version="1">MALLIDKSFRPGHSFNGTRQSDEMIGNGTATLFGGAGDDNLNPGINHGPARISVYGGWAREDVPHPADGLKVGSQNWWDDGDDVLHFGSHILAAGGNGENRYVWHGPGMEAWNRPGEIRGFNVENDTLIVPHDEGFRFGRMWVSSTRDDDGDKVVTLTKMEVVAMTKVPGTVEAHFILGVQDDGRERDFEPTEIEWSGRSYRDDVIRWFHAEVDIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P461</accession>
    <name>A0A2M9P461_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004827">
        <property type="protein sequence ID" value="PJN92341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7391" checksum="0B5DE247E48A45EF" modified="2018-04-25" version="1" fragment="single">LGQRLLQVAPPAQEPGEVEPGGEIDRVEAQRVAQLDWASACSRSPRPRRSRAKSSRAARLTGSRRSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P480</accession>
    <name>A0A2M9P480_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HTH luxR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_30535</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004826">
        <property type="protein sequence ID" value="PJN92342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="3">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="34"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="39"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7210" checksum="D589E42BED4E8835" modified="2018-04-25" version="1" fragment="single">ADLGVAEKTVKVHRARVMHKLEARAVADLVRLVRSPPTSASRKRPSRSTAPGSCTSSRRAPSPTSCAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D9</accession>
    <name>A0A2M9P4D9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004695">
        <property type="protein sequence ID" value="PJN92389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7497" checksum="DE0CDA9CB913A483" modified="2018-04-25" version="1" fragment="single">VSTETGALRIDAGRDLVMEREGVTVGPHNTQIFSGSGSVSTETGALRIDAGRDLVMEREGVTVGPHNTQIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E0</accession>
    <name>A0A2M9P4E0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004643">
        <property type="protein sequence ID" value="PJN92407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7798" checksum="16D4709E8AD706AD" modified="2018-04-25" version="1" fragment="single">RYTDVLTFPAVAQPGDDPALRHQHRRLDLGLVAGPATRSCTRNPPVSNRAIISISDSAFSRASSLRQRAER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F0</accession>
    <name>A0A2M9P4F0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004611">
        <property type="protein sequence ID" value="PJN92417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6351" checksum="9184D1855FD9DF69" modified="2018-04-25" version="1" fragment="single">MDVDADDTSHPRLPHSHDDGSGGGDTTPTDEMDKRNLGFSVILSLRSDLVAKRGASAASVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J5</accession>
    <name>A0A2M9P4J5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">HTH IS21-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_29725</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004527">
        <property type="protein sequence ID" value="PJN92438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017894">
        <property type="entry name" value="HTH_IS21_transposase_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50531">
        <property type="entry name" value="HTH_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <keyword evidence="2" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="HTH IS21-type" evidence="5">
        <location>
            <begin position="3"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5680" checksum="0D9757DB33AD505E" modified="2018-04-25" version="1" fragment="single">MALLSVIRRWALRDQLSIREIARRTGLSRNTIRKYLRLGTVQPEFKVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T4</accession>
    <name>A0A2M9P4T4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sorbitol dehydrogenase</fullName>
            <ecNumber evidence="1">1.1.99.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.21" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01004160">
        <property type="protein sequence ID" value="PJN92552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047833">
        <property type="term" value="F:D-sorbitol dehydrogenase (acceptor) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7680" checksum="0B22E31D66BF3978" modified="2018-04-25" version="1" fragment="single">HWEHVDAMFAKYENRPLGEKKRIVGESVPYGRMGVAEDLTGMAVFLASREADYIVAQTYNVDGGQWMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U0</accession>
    <name>A0A2M9P4U0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004147">
        <property type="protein sequence ID" value="PJN92556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014799647" evidence="1">
        <location>
            <begin position="23"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6878" checksum="F5492E6A06333F7B" modified="2018-04-25" version="1" fragment="single">MSYAIHGVIATLALTAVAVAHQAISLNDVGFAEARGRLTRGWAHFLYATQHGYRSYAKGGGNSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P501</accession>
    <name>A0A2M9P501_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004058">
        <property type="protein sequence ID" value="PJN92588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9764" checksum="2FD4B4506A4FFB5B" modified="2018-04-25" version="1" fragment="single">LNAFSDAFAYGGQSRVLTDGCYLIRHDDAYPLWPAAAAEIEMWRLDCGRINVPDLNAFSDAFAYGGQSRVLTDGCYLIRHDDAYPLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P513</accession>
    <name>A0A2M9P513_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NAD(P)-bd_dom domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003985">
        <property type="protein sequence ID" value="PJN92610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="9"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6564" checksum="6A0F2F864455FC29" modified="2018-04-25" version="1" fragment="single">MSKSPDTVMVTGAAGFVGSHLIERLLEMGQTVYGLDIAPLENARNLDAVRDNPKFHYMQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P536</accession>
    <name>A0A2M9P536_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003856">
        <property type="protein sequence ID" value="PJN92652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9806" checksum="4270AC63277A8F83" modified="2018-04-25" version="1" fragment="single">DGEITFPPPPPKVQAIAAAKPKPKAVEETREEKAARELVEVRKAANQTTLLLAVGGALLLLVGTVAPASFMAHFIVFVLSCFVGFHVIWNVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P542</accession>
    <name>A0A2M9P542_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-hydroxybutyryl-CoA dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.157</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.157" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003809">
        <property type="protein sequence ID" value="PJN92671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008691">
        <property type="term" value="F:3-hydroxybutyryl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH" evidence="1">
        <location>
            <begin position="3"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4846" checksum="004B3C9269DDF761" modified="2018-04-25" version="1" fragment="single">GLADTKYRPCPLLVKYVEAGWLGRKTQRGFYDYRSGEPVPTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B4</accession>
    <name>A0A2M9P5B4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_27160</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003657">
        <property type="protein sequence ID" value="PJN92727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11202" checksum="F470E59BCA553485" modified="2018-04-25" version="1" fragment="single">CRVEGASWFQIYRKVVMPLSGPVLATAAILKFLAMYNQYLWPLMVTQAEGYRPVMVGLQYFFQLNPVWGELMAYLSVITVPVLAFYLFLQRAFIASIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H3</accession>
    <name>A0A2M9P5H3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_26390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003420">
        <property type="protein sequence ID" value="PJN92804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IstB_IS21" evidence="2">
        <location>
            <begin position="2"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9459" checksum="315766315A807625" modified="2018-04-25" version="1" fragment="single">GALLFHLLSKLYERTSVVITTNLSFSEWATVFGDAKMTTALLDRLTHRCHILETGNDSFRFRASSGAARKTKEATGIDPHLNPRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R8</accession>
    <name>A0A2M9P5R8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003188">
        <property type="protein sequence ID" value="PJN92882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12654" checksum="90C04ADD90615ABB" modified="2018-04-25" version="1" fragment="single">KLRHRRPLLPSRQGAILNTRFQSQMDERLGSRHDPPERMAAELEVLAEKDDPAIALEAERFLGLLRTAPQQWAGVLSKAALATKRYAPGSPLGVHTARNGFVASDLKAKRVTVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P626</accession>
    <name>A0A2M9P626_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphopantetheine--protein transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_22200</name>
        <name evidence="9" type="ORF">CNY89_22235</name>
        <name evidence="8" type="ORF">CNY89_22270</name>
        <name evidence="7" type="ORF">CNY89_23950</name>
        <name evidence="6" type="ORF">CNY89_24905</name>
        <name evidence="5" type="ORF">CNY89_24920</name>
        <name evidence="4" type="ORF">CNY89_26935</name>
        <name evidence="3" type="ORF">CNY89_27680</name>
        <name evidence="2" type="ORF">CNY89_27975</name>
    </gene>
    <organism evidence="6 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003912">
        <property type="protein sequence ID" value="PJN92635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003821">
        <property type="protein sequence ID" value="PJN92668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003582">
        <property type="protein sequence ID" value="PJN92755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002969">
        <property type="protein sequence ID" value="PJN92967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002964">
        <property type="protein sequence ID" value="PJN92970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002681">
        <property type="protein sequence ID" value="PJN93077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002250">
        <property type="protein sequence ID" value="PJN93257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002242">
        <property type="protein sequence ID" value="PJN93262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002236">
        <property type="protein sequence ID" value="PJN93265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN92967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN93265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3575" checksum="F62CC5180FB1F0FD" modified="2018-04-25" version="1" fragment="single">MKTLAIISQKGGVGKTTLATALAVAAELDGKSVALF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P635</accession>
    <name>A0A2M9P635_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">4HBT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002940">
        <property type="protein sequence ID" value="PJN92978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="5"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9632" checksum="B6F189824196F5ED" modified="2018-04-25" version="1" fragment="single">QAEEGIVFAVRRVEADYLAPARLQDELDVTTGLVGLGGARIDLIQEVRRGGTLLFTAGVRGVLDPHGPLGPHLRLVPLLRPRTSRIEIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P650</accession>
    <name>A0A2M9P650_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002864">
        <property type="protein sequence ID" value="PJN93012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019068">
        <property type="term" value="P:virion assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006429">
        <property type="entry name" value="Phage_lambda_portal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05136">
        <property type="entry name" value="Phage_portal_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13767" checksum="96CA575121B09CD9" modified="2018-04-25" version="1" fragment="single">GAPVIRSLRDLDDYEVAELVRKKTEACVTAIVFGDDEAQQGIAPSVVDADGNRVEQFEPGLIAYARGGKDIRFNQPSATGGYGEYKRASLHTISAGFRVPYELLTGDLSQVNYSSIRAGLVEFRRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P672</accession>
    <name>A0A2M9P672_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002874">
        <property type="protein sequence ID" value="PJN93008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018691">
        <property type="entry name" value="DUF2188"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09954">
        <property type="entry name" value="DUF2188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8306" checksum="CE0A77C80DB08678" modified="2018-04-25" version="1">MSGKNQYVVRNGDGWGVRGEGNERLTRSFERQSDAIDYGRGIARNQGAELRIQGEDGKFREAWSYGNDPFPPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P697</accession>
    <name>A0A2M9P697_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002636">
        <property type="protein sequence ID" value="PJN93094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10703" checksum="AC7EEB8E1222E8F9" modified="2018-04-25" version="1">MPELVLALASYTTSRDTTRVRLDYADLTGAQLTDSILIGAQIHRRDAWPCKLMGADLRGAVLSGVDLTNADFRNTTWAGAKSGAPPPQSFLRHPRRPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6C0</accession>
    <name>A0A2M9P6C0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF4411 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002721">
        <property type="protein sequence ID" value="PJN93065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9485" checksum="53CBD38F4EA313A0" modified="2018-04-25" version="1" fragment="single">NRRGVQAEIVRIMQTYPKLVDTGKGKSGGDPFVIAQALAHNPRLVIVTQEAGGSADKPKIPYVCDQERLRHIDLLALIEEEDWTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E5</accession>
    <name>A0A2M9P6E5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002642">
        <property type="protein sequence ID" value="PJN93089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7038" checksum="F90A60452809574B" modified="2018-04-25" version="1" fragment="single">FGSRPYRAGPYGRGVFKPGVFEPGVFVDYEQQPDEPTARREMLDRLERLEQMIAPLVAPSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H7</accession>
    <name>A0A2M9P6H7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002540">
        <property type="protein sequence ID" value="PJN93127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4178" checksum="F383212996FDBD2C" modified="2018-04-25" version="1" fragment="single">MTRTALEGFGKTLEATDEVVIEATGNSMAAARVLSPLVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L6</accession>
    <name>A0A2M9P6L6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002342">
        <property type="protein sequence ID" value="PJN93214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9187" checksum="7131A931C0724ADC" modified="2018-04-25" version="1" fragment="single">ETGMAFPDTGFNPLSILDPASSTFHADVSAFARLLMVTDRRESGSYWNDEGAEFLGLLIAGLKRYHHPELHTLTALYEFVRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q7</accession>
    <name>A0A2M9P6Q7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Streptomycin resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002364">
        <property type="protein sequence ID" value="PJN93199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="13075" checksum="B68388F54F7F9DBE" modified="2018-04-25" version="1" fragment="single">ATGIIADVLRKLHFDFQGEPPEGVTLLPRRFQCLFHKADEDNQADPSSIFIRGAAVARRLLAEDTPSYVLHGDLHHENIRHHPERGWLAIDPKGLYATAPMTLLTPFATRAHCLKSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Z6</accession>
    <name>A0A2M9P6Z6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002074">
        <property type="protein sequence ID" value="PJN93336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12809" checksum="C8D9BEF0473139F7" modified="2018-04-25" version="1" fragment="single">DYAHLAVAMCRALNIPARYASGYLGDIGIAPLPDPMDFCAWFEVYLGGEWHTFDARYNTPRIGRILMVRGRDAADTAMITSFGMHALQSFNVWTVELDPNLTTRDLPWPKLAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B2</accession>
    <name>A0A2M9P7B2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21095</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001967">
        <property type="protein sequence ID" value="PJN93398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9228" checksum="26D05821664E7DA0" modified="2018-04-25" version="1" fragment="single">RDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSAPPPVATVAPRRNSQHAIPVADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F0</accession>
    <name>A0A2M9P7F0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Multidrug DMT transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001841">
        <property type="protein sequence ID" value="PJN93481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="4747" checksum="B279CC6013E2A209" modified="2018-04-25" version="1" fragment="single">MAGLLLVGLAAILWGTVGVATNLMTAPSALDPALAGLSRTALGAASLLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T1</accession>
    <name>A0A2M9P7T1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001696">
        <property type="protein sequence ID" value="PJN93579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8342" checksum="30F0AA1D43B46E60" modified="2018-04-25" version="1" fragment="single">TTAPPTARQRFNPRERAAALPSSYTTTWDTTAPHSGLDYRTPMEVLTAHVATTLEPLAGSALPLIAKHNAEDSSSARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P871</accession>
    <name>A0A2M9P871_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001494">
        <property type="protein sequence ID" value="PJN93744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6404" checksum="9E373978633D66F7" modified="2018-04-25" version="1">MLIIRSLPVLGRLPRRYTIDRRRGGPFHKVSALSPNGPSAGATATAKPVRKPARTARRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N9</accession>
    <name>A0A2M9P8N9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001371">
        <property type="protein sequence ID" value="PJN93889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12796">
        <property type="entry name" value="Ank_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00248">
        <property type="entry name" value="ANK"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="SSF48403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="123"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="156"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="29855" checksum="93EDAE1F1833669B" modified="2018-04-25" version="1" fragment="single">PELALRLLDASADINVTSAYDASPLFFMAMHGLTDLARTFLERGATLLQFSAKKSSPLMSAAWYGHRDLVVLYLAQPAIDEDYVNARNDEGLTALAGALSVGDARIRDMLVAAGARLEKPATQGYTHLHAAAAGGSPELVEWVLRAGYPVDALTSDGWSPLHIACSNTPSLDVARLLLDCGADPWRENVGGWTPVRLAAWWDNLDILRHFGDLGAPLVPQLVRDAAGGGASAVLDYLLVDRAVPTDLPGLVDPMIRSGKPAAAEYLLARADAFGAKHDHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P3</accession>
    <name>A0A2M9P8P3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001346">
        <property type="protein sequence ID" value="PJN93915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14614" checksum="33CCA6D6024D69D8" modified="2018-04-25" version="1" fragment="single">MPTPRETILTALHARLLALPANALRGDVLPERVPVEGLLILRDGEPGEPEVTLSPLAYHYQHRAEIEAVVQGAARDTAFDALTASIGSALAADRTLGGLCDWVEAEAPRPVDLPVEGAASLKAAVIPVVLHYSTADPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U3</accession>
    <name>A0A2M9P8U3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ferredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001303">
        <property type="protein sequence ID" value="PJN93965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022569">
        <property type="entry name" value="Fd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11953">
        <property type="entry name" value="DUF3470"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3470" evidence="2">
        <location>
            <begin position="2"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="31" mass="3393" checksum="567982AF12C17E00" modified="2018-04-25" version="1" fragment="single">TKRDPLPEATERDGEKDKLAKYFSEAPGEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P929</accession>
    <name>A0A2M9P929_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">FtsK domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16755</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2">Homohexamer. Forms a ring that surrounds DNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the FtsK/SpoIIIE/SftA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001233">
        <property type="protein sequence ID" value="PJN94058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041027">
        <property type="entry name" value="FtsK_alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002543">
        <property type="entry name" value="FtsK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17854">
        <property type="entry name" value="FtsK_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01580">
        <property type="entry name" value="FtsK_SpoIIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50901">
        <property type="entry name" value="FTSK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FtsK" evidence="5">
        <location>
            <begin position="171"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="188"/>
            <end position="195"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00025923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="36079" checksum="59A284034A8477A6" modified="2018-04-25" version="1" fragment="single">PKPVVRARVRTDARTDARAGDPAKAPPIEPAEGEYTTPPLELLQDPSSIVRHHLSTEELEDNARMLESVLDDYGVRGEIVAIRPGPVVTMYELEPAAGLKASRVIGLSDDIARSMSALACRVSTIPGRSVIGIELPNDNREKVLLREILVAKSYGDSTHALPLALGKDIGGEPVVANLARMPHLLIAGTTGSGKSVAINTMILSLVYKLRPDECRLIMIDPKMLELSVYDGIPHLLSPVVTDPKKAVVALKWVVAEMEDRYRKMSKMGVRNIDGYNMRVKDALARGEAFTRTVQTGFDEDTGEPVFETDSFQPQTMPFIVVVVDEMADLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G8</accession>
    <name>A0A2M9P9G8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001144">
        <property type="protein sequence ID" value="PJN94183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014870600" evidence="2">
        <location>
            <begin position="19"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="264"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="301" mass="32988" checksum="E5439A13A30F0C9C" modified="2018-04-25" version="1" fragment="single">MRPLLAAALALAAAPVAAQQQILPQAQIPGSPLITARISQGATLDTNFGLEDPRQGNSYFADTGLQLGLLSETELQTLSIGLDTGLRALWEAQEDFRFTFASPTTARLDYGRDWSTGGIDVDLRFRQAEQDADRVLGPNEDPAAGGDDLERLGINVTQYRYDGAIDLELAQDSPSSYTFSLSGTRIDYDEVTANRTPRDTFQGEAGWRLRFNETVSGALNGLFIYYDADNAQQTQVRFGSIDAGVIYQPSDVLRVDFGVGYAHRERRETERPASDNPVRDTSTDSGPAARFALRYAFEDVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I4</accession>
    <name>A0A2M9P9I4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NAD-dependent epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15885</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001127">
        <property type="protein sequence ID" value="PJN94204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="14"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="287" mass="31119" checksum="F5FE96FCCB5D76D9" modified="2018-04-25" version="1" fragment="single">MENAAATPLVGTRALVTGGAGFVGSHLVDLLLDEGCARVVVVDDMVRGRPANLAAALATGRVDLVEGDIRDGALMRRLVEADMTVFHQAALRITHCAAEPDLAMEVMVKATHDLLQLCVRSKARKVVMASSASIYGMAEVFPTEESHHPYANRTLYGAAKAFGEGLLRSFNDMYGLDYVALRYFNVYGPRMDIHGRYTEVMVRWMERIAAGKPPIIFGDGLQTMDMIHVRDVARANVLAARAEIQDAVFNVGSGTETSLLDLARELAAAMGRPDLVPVHEAERAVNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L1</accession>
    <name>A0A2M9P9L1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MliC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15840</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001121">
        <property type="protein sequence ID" value="PJN94215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018660">
        <property type="entry name" value="MliC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036328">
        <property type="entry name" value="MliC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09864">
        <property type="entry name" value="MliC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141488">
        <property type="entry name" value="SSF141488"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0564">Palmitate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014974358" description="MliC domain-containing protein" evidence="5">
        <location>
            <begin position="18"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="MliC" evidence="6">
        <location>
            <begin position="28"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF09864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="11919" checksum="24C0266475C16675" modified="2018-04-25" version="1">MIPLLAALLGLAAPAAAQDAPPGFSVTYLCEGNAVLQVAYLNPAGGPSLAVVEWAGKLIPMQAGPTGSGVRYIAFDEQQSFRWHTKGPEGTLLFLAADHTAQEEVVLGDCRQVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R1</accession>
    <name>A0A2M9P9R1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001072">
        <property type="protein sequence ID" value="PJN94283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="87"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="119"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="338" mass="38057" checksum="A63638F9BF407C2A" modified="2018-04-25" version="1" fragment="single">MSLLKIWKPLSELRSCNTEGLPISDQIHAWVVNDWALALRGADFCRNGPLSRLANVTTLALVWWVGPTVLCLAWWRSMPAHDEVLTIWLGVWFLFTIFVGAVSWNTAESLLRPSRSSISFSLLPWSLASALTSAVIVVSWARTEGGLDHYARVALEFWESRNSALFASAEARDAALARQWWLPELTDLSIRISPAEQWNPLAKAHLEEEVIADRSPSWQDYDLARRHYREDWCRRGGHQVEVCAHDEAAASSVEKIPQEYRTWCASSALGYDAACAKRARLLEDRFAAEWRAKRDSQLLGVPKPDLSDADLRFAHANAVQLDGAILRKARLDQADLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U1</accession>
    <name>A0A2M9P9U1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome d ubiquinol oxidase subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cydB</name>
        <name evidence="8" type="ORF">CNY89_15310</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001059">
        <property type="protein sequence ID" value="PJN94304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43141">
        <property type="entry name" value="PTHR43141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00203">
        <property type="entry name" value="cydB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="118"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="185"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="221"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="263"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="296" mass="32177" checksum="C2FEC2496222F61F" modified="2018-04-25" version="1" fragment="single">CTDPVMVNTVAPVWDGNETWLVLGGAGLLAAFPQAYATILSALYLPLMLMLAGLIWRGVAFEFRFKADEHHKPFWDKAFTWGSYIATMAQGMALGGFIDGFELSETGSFAGGALDWLTPFSVFTGVSLVIAYALLGATWLVMKTEGPLQAQMRRLARGMTIALIAAIALVSVWTPLAHEEVAARWFVLPNLLFFLPVPILVGITAWGLLNATHGQSHSSPFLLALVLLFLGYSGLGISLWPMIIPPSVTIWQAAAPPQSMGFALVGALFIIPFILMYTAWSYYVFRGKVKSGDGYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA00</accession>
    <name>A0A2M9PA00_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001028">
        <property type="protein sequence ID" value="PJN94360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9687" checksum="D36908B8D813F135" modified="2018-04-25" version="1">MTSPRFKVEPRDVPPAVAARLLGQTEERFLSCLPDLMARGFPAPDDTTGNYDLKAVNAWQDRRSGFGVAAAQAAKDAQTVVASRLGGLGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA22</accession>
    <name>A0A2M9PA22_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycine cleavage system protein T</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gcvT</name>
        <name evidence="3" type="ORF">CNY89_14820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GcvT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001011">
        <property type="protein sequence ID" value="PJN94388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006546">
        <property type="term" value="P:glycine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006223">
        <property type="entry name" value="GCS_T"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00528">
        <property type="entry name" value="gcvT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GCV_T" evidence="2">
        <location>
            <begin position="9"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="29042" checksum="0A313053D3445D44" modified="2018-04-25" version="1" fragment="single">MTELLQTPLHALHQSHGARMGPFAGYDMPIQYPDGVLKEHLHTREAAGLFDVSHMGQVILRPRSGELADAALALEALVPVDVLGLKPGRQRYGLFTTPDGGILDDLMIANRGDHLLLVVNAANKDADFAHLKAHLDPVCEVEPLDRALLALQGPKAEAALSALDPDAALMRFMDVWDLRPEGIPAVASRSGYTGEDGFEVSVAAESAVDLAQRLLEDPAMRLIGLGARDSLRLEAGLCLHGHDIDQETTPVEAGLEWAIQGARRRGGARAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG4</accession>
    <name>A0A2M9PAG4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ribonuclease D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rnd</name>
        <name evidence="5" type="ORF">CNY89_14060</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000933">
        <property type="protein sequence ID" value="PJN94512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033890">
        <property type="term" value="F:ribonuclease D activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010997">
        <property type="entry name" value="HRDC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002121">
        <property type="entry name" value="HRDC_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044876">
        <property type="entry name" value="HRDC_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006292">
        <property type="entry name" value="RNase_D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00570">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47819">
        <property type="entry name" value="SSF47819"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01388">
        <property type="entry name" value="rnd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50967">
        <property type="entry name" value="HRDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="HRDC" evidence="4">
        <location>
            <begin position="213"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="282" mass="31702" checksum="0178DEC3271979FF" modified="2018-04-25" version="1" fragment="single">MTAPITRTDDLAQFCRDCLDAPYVTVDTEFMRERTYYAQLCLVQLGRPGKGPESAVVVDTLAEGLSLEPLYELFRAPDVVKVFHAARQDLEIFATTADVIPKPFFDTQVAAMVCGYGDQAGYETLARQIARATIDKSSRFTDWARRPLSQAQLDYALADVTHLRKIYEVLSKRIADTGREAWVQEELAVLLDPATYRADPETAWTRLKTRSTAPKFLGALKELARFREIAAQTRNVPRARILKDDALLEIAANRPRNLDDLGKSRLLLREGRRGDVAEGILK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL4</accession>
    <name>A0A2M9PAL4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000887">
        <property type="protein sequence ID" value="PJN94590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16317" checksum="097FEA880DC584CD" modified="2018-04-25" version="1" fragment="single">MGRSARHLGTALTLAGLVLLAGCSMPLGAIPASEPNQIDPKTMSDSERGLFAGMLFGKEVELPPAVPVPMREATIERGFGGVIVRATGVAPTQGYFNQVLLADDEGQPDAAGVVTLRLLAIPPLSPEAIGPERTRLLMTAAFFQELELRGVKAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR9</accession>
    <name>A0A2M9PAR9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Catechol 1,2-dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_13400</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000865">
        <property type="protein sequence ID" value="PJN94626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018576">
        <property type="term" value="F:catechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009712">
        <property type="term" value="P:catechol-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007535">
        <property type="entry name" value="Catechol_dOase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04444">
        <property type="entry name" value="Dioxygenase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Dioxygenase_N" evidence="8">
        <location>
            <begin position="36"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="7">
        <location>
            <begin position="117"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="310" mass="34054" checksum="05D492BCF2A4ED41" modified="2018-04-25" version="1">MTAQGRLRPTQARPHVIEDQKDVTAIVLDAMSATPDARLKEIMGSLVRHLHDFAREVKLTEEEFEFGVDFLNRIGQATHDAHNEGVLASDAIGFSTLVCLLNNGRNGATETAAALLGPFWRMHSPATPNGGSILRSETPGSALFTTCRITTPDGAPLAGVEVDVWQASPVGLYENQDEGQADMNLRGKFVTDAEGRFWFRSVKPAGYPVPTEGPIGDLLRAQMRHPYRPAHLHFLAFKPGYKTLITQIFVDDDENLESDVVFGVTRHLIGDFRKGEGAPPASDVTGEWHRLDYAFVMEEGESKLPVPPIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS0</accession>
    <name>A0A2M9PAS0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000870">
        <property type="protein sequence ID" value="PJN94621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="7"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="421" mass="42860" checksum="FA252B4EC0DC7410" modified="2018-04-25" version="1" fragment="single">GGNGNDWLVTELSGHVTEEFQFNFTVQQTGGRGNDNLYVSATSTTNTGYSTGGFIIDLSGGAGDDNIWIEVDGEAGASSNLVDAGSGSDVVYIYADGDYFGGGGSNEVLAGAGDDEVTVRSYSSFIVAGDNTLWGGDGNDRLEATLIGTYGANELYGEDGDDFLIADGFVSDNGGSSISNRVWGGTGNDTIELNATSYGTGADASNEAYGDEGDDRITSVTHVGSGSDTYFGSADTLLYGGSGNDVLTATTTYNFGEGENIEGGATLYGGNGNDSLRVYGGVENILNGGAGDDTLTGGSGNDRIIGGSGADQLRGAGGDDAFVYLWMTGGAVATRDTIFGFQAFGDDVIDLSAIDANANRGGNQAFVFGGTGVGRVWVEDSTTGSGSIVRANNGGPETLYIAVEDGTGRDASDWTADDFLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT2</accession>
    <name>A0A2M9PAT2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000852">
        <property type="protein sequence ID" value="PJN94646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="2">
        <location>
            <begin position="71"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="309" mass="34019" checksum="4F20F537D639F50D" modified="2018-04-25" version="1" fragment="single">SADLTPAAVPVATTAPAAPPGERPEQLRHRQTIGFCTATDGVRIAYATVGAGPPLVKAANWLNHLELDWGSPIWSRTFEALAAGRSFIRYDERGNGLSDWDVPEITFDAFVRDLETVADTLGLERFPLLGMSQGCAVSIDYAVRHPEKVSALVLIGGYASGWRIGAPAEERERREAVMTLTRLGWGGANPAYRRIFSHTFIPDATPEELVWFDEFQRLTTSAENALRFQDAFGDIDVRHLLGQVRCPTLVLHARDDQRITLAQGREVAIGIPGARFVALDSRSHILLGHEPAWEVCMAEIERFLAEHGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB00</accession>
    <name>A0A2M9PB00_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_12870</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000816">
        <property type="protein sequence ID" value="PJN94708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043772">
        <property type="term" value="F:acyl-phosphate glycerol-3-phosphate acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003811">
        <property type="entry name" value="G3P_acylTferase_PlsY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30309">
        <property type="entry name" value="PTHR30309"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02660">
        <property type="entry name" value="G3P_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01207">
        <property type="entry name" value="G3P_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="9" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="23"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="80"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="11507" checksum="61FA335B2E0133D6" modified="2018-04-25" version="1" fragment="single">PVGLIACATWALAAKIGKISSLAALVAAGTAPVALAWPVGLIACATWALAAKIGKISSLAALVAAGTAPVWLWLLGPQGSVWPGLAMAVLVFLRHHENIARLRAGTEPRIGGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB64</accession>
    <name>A0A2M9PB64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA polymerase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000785">
        <property type="protein sequence ID" value="PJN94765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023073">
        <property type="entry name" value="DNA_pol_error_prone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294:SF4">
        <property type="entry name" value="PTHR32294:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="168"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="171"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="23751" checksum="AEF59DC65FC1D328" modified="2018-04-25" version="1">MTLELFQPTPSYLIEGVGPYTIRCAYRHAEDLQVFVWDDGVLTELALGADYTVLPTQAPIRRLVSCAEAMEARDGRLLTTAGIVLVRQMPGSAKGMLFVTIEDETRVANLVIWRKLYARQRRVILGARMLGVQGRVQREGAVVHLIANQLTDLSEELAAIGAQEGAFPLPHGRGDEFHHGGPGRDPRDMPKPRDLPDPHGRIDQLRVKPRDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD4</accession>
    <name>A0A2M9PBD4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12040</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000734">
        <property type="protein sequence ID" value="PJN94847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021273">
        <property type="entry name" value="DUF2852"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11014">
        <property type="entry name" value="DUF2852"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="36"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="17004" checksum="ED615DE6CBA4F421" modified="2018-04-25" version="1" fragment="single">MHTATSWQRPAESWTSAPRAALERCRDWLDARGRPAWIVAMVAGFILFWPIGLAILFYMIWSNRMSCSRWGRRAHSRNVAAGTGNAAFDAYREETLKRLEDEREAFTAFLDQLRKAKDQAEFDQFMASRQTPPGARGGLTEAARPVSPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF8</accession>
    <name>A0A2M9PBF8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Peptide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11860</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000719">
        <property type="protein sequence ID" value="PJN94876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="9"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="29317" checksum="BCE99B80D251A91E" modified="2018-04-25" version="1" fragment="single">MLDGPAAVLDVADLETVFDTRDGAVHAVNGVSFSIAPGELVGVVGESGSGKSVTMMSLMGLLPSPPARIVRGAILYQGRDVRAMSPRELRELRGGEIGFVFQDPMTSLNPVFTVGYQLMEPLRAHLGLSRKEARRRAAELLGLVGIPAPEQRLDDYPHQFSGGMRQRVMIAMALSCDPKVLIADEPTTALDVTIQAQILELVRGLRARLGMGIVWITHDLALVAGIADRVMVMYAGLIVEHGPVAEIFAHPQHPYTRALLGTVPSVVGRGPSGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI7</accession>
    <name>A0A2M9PBI7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1150 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000704">
        <property type="protein sequence ID" value="PJN94903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009531">
        <property type="entry name" value="DUF1150"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06620">
        <property type="entry name" value="DUF1150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8240" checksum="B867EF8AEE172B94" modified="2018-04-25" version="1">MTEFPIVPGEDGKRIVYVREVKTADLSEEIRARTGGLDHLYAIHAEGGEVLALVADRQQAFVVARQNELAPVSVH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK0</accession>
    <name>A0A2M9PBK0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">5-(Carboxyamino)imidazole ribonucleotide mutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000704">
        <property type="protein sequence ID" value="PJN94904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000031">
        <property type="entry name" value="PurE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00731">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01001">
        <property type="entry name" value="AIRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRC" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6132" checksum="72700D76C4507778" modified="2018-04-25" version="1" fragment="single">MGSQSDWPTMRAAAEILTALDIPHETRIVSAHRTPDRMFAYAEAAAGRGLHAIIAGAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN3</accession>
    <name>A0A2M9PBN3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000683">
        <property type="protein sequence ID" value="PJN94943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008878">
        <property type="entry name" value="Transposase_IS66_Orf2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36455">
        <property type="entry name" value="PTHR36455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05717">
        <property type="entry name" value="TnpB_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12613" checksum="3442F7313DC34E8E" modified="2018-04-25" version="1">MIAFPAGARAWIAGGVTDMRCGMNSLALKVQQGLGRDPHGGEVFCFRGRRGDLVKILWHDGVGMSLYLKRLEAGKFIWPVSQGGTAVAISAAQLSYLLEGIDWRNPRWTQRPATAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ8</accession>
    <name>A0A2M9PBQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11305</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000672">
        <property type="protein sequence ID" value="PJN94965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="115"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14143" checksum="1B9F3E32CAADE695" modified="2018-04-25" version="1" fragment="single">GKFAMLSAALNSGGLAEGRVSNAALGFTALLLISGLAALIALVREGIRSFWSTEADEATPAVPLVELVPVVALLALTVVMTVEARAVMRYMEATASALHHPHLYIDGVLGASQEPATMEPEPALPTPRVLDTEPEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS2</accession>
    <name>A0A2M9PBS2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AbrB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000669">
        <property type="protein sequence ID" value="PJN94972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="1">
        <location>
            <begin position="5"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7631" checksum="D6CACAABBEF3D7E4" modified="2018-04-25" version="1">MAETATLSSKFQISIPKAIRAAQHWEAGLTFAFIPKGTGVLLVPVPKREALKGLARGASATDYRDRTDRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU7</accession>
    <name>A0A2M9PBU7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">UPF0314 protein CNY89_11005</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_11005</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the UPF0314 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000647">
        <property type="protein sequence ID" value="PJN95017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01514">
        <property type="entry name" value="UPF0314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019691">
        <property type="entry name" value="DUF2585"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10755">
        <property type="entry name" value="DUF2585"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01514"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="20962" checksum="F7884381BB62CFCA" modified="2018-04-25" version="1">MTHSDRRPVLLTLAAVLATAAILLAMGRLPICECGYVRLWVGDPNTSDNSQHIADWYTPSHVIHGFLFYWLARLALPRASFAWRLLAATLVEAAWEITENTDWIITRYRDATISLDYFGDSVLNSTMDIGAMMLGFWLASRLPVWLTVTLALGFEALTAWLIRDGLILNVLMLVWPLESVRIWQGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV3</accession>
    <name>A0A2M9PBV3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Antitoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Antitoxin component of a type II toxin-antitoxin (TA) system.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the phD/YefM antitoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000643">
        <property type="protein sequence ID" value="PJN95026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006442">
        <property type="entry name" value="Antitoxin_Phd/YefM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046257">
        <property type="entry name" value="DUF6290"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036165">
        <property type="entry name" value="YefM-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19807">
        <property type="entry name" value="DUF6290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02604">
        <property type="entry name" value="PhdYeFM_antitox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143120">
        <property type="entry name" value="SSF143120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9944" checksum="66D432D31DE85FE6" modified="2018-04-25" version="1">MTKPLSVSEARDKLAEVIGQVQYGGERVTISRRGKPVAVVVSVADAAWLEAMEDQIDVKLALEAKAEMEALGGKTYSHAEVFAELDDPDARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC43</accession>
    <name>A0A2M9PC43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000604">
        <property type="protein sequence ID" value="PJN95103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8877" checksum="D470DE9316EF8847" modified="2018-04-25" version="1">MPVLPVLILTPEQADDLAQMTAGEENQILARPIDGGEHAGMRALPTRVRSDPSYSGEGFQAVFAVLSEVELDTAVAWPAVEDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC47</accession>
    <name>A0A2M9PC47_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000595">
        <property type="protein sequence ID" value="PJN95120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="28425" checksum="E372E7A2BF8486D0" modified="2018-04-25" version="1" fragment="single">MAFSTTPSEGADRLRATAEGQTINALGGNDWIGSTFDASTLYGGLGHDRITVSLDLDEPSANDSQRSSTIYGGNGNDTLVSDFTVRSTDEQPEFSFNFISLQSGGNGNDNIYISALGVDAFYPIGTFSFNVFGGAGDDTIWIDAGGPGVYNHNVVDAGSGADIVYVSFEASSEWGGSTNEIYAGAGDDDVTIGGEAAWMDGPNENAAWGEDGNDRIEVVTYAALSINKLYGGAGDDIIIADGVSAGDPGGSLESSAWGGDGNDTISLIGRGGSLSDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC79</accession>
    <name>A0A2M9PC79_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Alpha-1,4 glucan phosphorylase</fullName>
            <ecNumber evidence="9">2.4.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_10415</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Allosteric enzyme that catalyzes the rate-limiting step in glycogen catabolism, the phosphorolytic cleavage of glycogen to produce glucose-1-phosphate, and plays a central role in maintaining cellular and organismal glucose homeostasis.</text>
    </comment>
    <comment type="function">
        <text evidence="8">Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>[(1-&gt;4)-alpha-D-glucosyl](n) + phosphate = [(1-&gt;4)-alpha-D-glucosyl](n-1) + alpha-D-glucose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:41732"/>
            <dbReference type="Rhea" id="RHEA-COMP:9584"/>
            <dbReference type="Rhea" id="RHEA-COMP:9586"/>
            <dbReference type="ChEBI" id="CHEBI:15444"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="2.4.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the glycogen phosphorylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.1" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000600">
        <property type="protein sequence ID" value="PJN95112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008184">
        <property type="term" value="F:glycogen phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102250">
        <property type="term" value="F:linear malto-oligosaccharide phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102499">
        <property type="term" value="F:SHG alpha-glucan phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000811">
        <property type="entry name" value="Glyco_trans_35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035090">
        <property type="entry name" value="Pyridoxal_P_attach_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11468">
        <property type="entry name" value="PTHR11468"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00343">
        <property type="entry name" value="Phosphorylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00102">
        <property type="entry name" value="PHOSPHORYLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 9" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="23925" checksum="4D6C303E97E25D21" modified="2018-04-25" version="1" fragment="single">YHNAKLIIKLANDVARAINGNPRVRDVLKVVFVPNYNVSMAEILVPAADLSEQISTAGMEASGTGNMKFALNGALTIGTLDGANVEIKEQVGDDNIIIFGLTAEEVAERWAKGHNPREIIESSPELSQALKMIASGVFSPDDPARYRGLVGGLYDHDYFMVAADFDAYAAAQRQVDKLWADPAAWRRKAILNTARMGWFSSDRTIRQYSRDIWNVPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF5</accession>
    <name>A0A2M9PCF5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-lactate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09870</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LDH/MDH superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000558">
        <property type="protein sequence ID" value="PJN95203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004459">
        <property type="term" value="F:L-lactate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018177">
        <property type="entry name" value="L-lactate_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00064">
        <property type="entry name" value="L_LDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ldh_1_N" evidence="2">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Ldh_1_C" evidence="3">
        <location>
            <begin position="142"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="20587" checksum="131829E4BB763D37" modified="2018-04-25" version="1" fragment="single">MKVGIVGAGMVGSAAAYAIGLKGAAREVVLVDRDPRLAEAHALDILHAMPFGSDTAVSAGGYGALEGAEVVILAAGVAQRPGETRVDLLGRNAAVFREVLGETLAVCPDPILLIASNPVDVMTQVSQAISGLPRTRVIGSGTILDTARFRSLLGAHLHISPRSIHAYVLGEHGDSQVLGWSCARAGAVPIAAFAAQVGAPIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF6</accession>
    <name>A0A2M9PCF6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">YkuD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09960</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000564">
        <property type="protein sequence ID" value="PJN95192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="4">
        <location>
            <begin position="55"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="33566" checksum="EB36E998A6C55FDE" modified="2018-04-25" version="1">MQSALERFQTQAGLEPDGLAGRRTVATVNAGPEERLRQVVVNLERLRWTNVDPGPRYIVANIPDYSVRVVEDGRTVFTSRVVVGKADDTRTPEFSDVMTYLVVNPTWHIPDSIAQRVYLPKLKKNPNTLANSNMRIFTRSGTEINPGLVDFNQFSSGNFPFRIKQNPSDANALGRVKFMFPNQFSIYLHDTPHRELFARTERAFSNGCIRVERPLDLAYLLLQGQVPDPQASFDGWLAAKSERTVQLQHPIPVTLEYRTVYLDDAGRIQQRFDVYGRDAEVFRALEAQGVTLALAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL9</accession>
    <name>A0A2M9PCL9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protocatechuate 3,4-dioxygenase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pcaH</name>
        <name evidence="5" type="ORF">CNY89_09310</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000511">
        <property type="protein sequence ID" value="PJN95297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018578">
        <property type="term" value="F:protocatechuate 3,4-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019619">
        <property type="term" value="P:3,4-dihydroxybenzoate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03464">
        <property type="entry name" value="3_4-PCD_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024756">
        <property type="entry name" value="PCDO_beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012785">
        <property type="entry name" value="Protocat_dOase_b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12391">
        <property type="entry name" value="PCDO_beta_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02422">
        <property type="entry name" value="protocat_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00083">
        <property type="entry name" value="INTRADIOL_DIOXYGENAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="4">
        <location>
            <begin position="77"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="26853" checksum="34336BDBAB4FD42D" modified="2018-04-25" version="1">MTAEFFQRDRTLHPPALTPTYKTSVARSPRYALLSLQNSLSEVTGPRFGHNDIGALDNDLILNYAHGGEPIGERIIVHGRVLDETGRGVPNTLVEFWQANAGGRYRHKKDTYLAPIDPNFGGCGRTLTDEAGYYHFRTIKPGAYPWRNWVNNWRPAHIHFSVFGSGFAQRLITQMYFEGDPLIRNCPIVRAIPDQDAVDQLIAPLDLNAAAPLDCLAYKFDIVLRGSRSTLFENRLEGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM8</accession>
    <name>A0A2M9PCM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000508">
        <property type="protein sequence ID" value="PJN95307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11183" checksum="12208BCD192FFA34" modified="2018-04-25" version="1">MKNENGLVGLFTEDSDARGVLVGLPDGFVAVASRVDFDGTEAVPIIEIKAQLEEMGQLFSVSGVLRLDDARALHSLLGREIKAIARAAEGLEKSREATSETGQKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV7</accession>
    <name>A0A2M9PCV7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000492">
        <property type="protein sequence ID" value="PJN95344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8217" checksum="BAE2401DC8CD3B0F" modified="2018-04-25" version="1">MNAGGLVMWPAKFLILVFQGVSEIIKSIAILRGDLPLPPDGEEEHMPPELREQLNIVHEMEESRTRRGNSDHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY3</accession>
    <name>A0A2M9PCY3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IMP dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000468">
        <property type="protein sequence ID" value="PJN95399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018667">
        <property type="entry name" value="DUF2126"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09899">
        <property type="entry name" value="DUF2126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="121"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="678"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="678" mass="75489" checksum="D099B1DE5D1F1AB4" modified="2018-04-25" version="1" fragment="single">VNHQQDPYGNWLARFVFPEPVTELKIEVDLVADMTVYNPFDFFVEEAAEEWPFEYPEDLREDLSIYRKPDPVGAHLQAFLDTIPRDKARTVDFLVGLNARISREVGYVIRLEPGVQTPEETFERGTGSCRDSSWLFVQTLRNLGFAARFVSGYLIQLKPDLKALDGPSGTEVDFTDLHAWCEVYLPGAGWIGFDPTSGLLTGESHIPLAATPHYRNAAPISGLATPAEVEFDFDMKVMRVAEHPRITKPFSEESWTALDALGKKVDAALNAGDVRLTMGGEPTFVSIDDFESAEWNTAAVGPTKRILADQLIRRLRDRFAPGGFLHYGQGKWYPGESLPRWTFSLYWRRDAAPIWEDERLIAKEGDQTGVGPKQAEALLRGIAGYLGVDPDCAIPAYEDPGEWILKEGNLPDNVTPENSKLKDPEERNRFARVFNRGLTEPAGYVLPIQSWQAKATGTTWRSEKWRTRRGHLFLIPGDSPVGFRLPLGALPWISASAYPYTNVVDPTMIKGELPKFPRSALQPQVEPPYDNPVAHFTKDASQQDRVEQHVTPEGGSVRTALSVEPRDGRLCVFMPPVERVEDYLELLAAAEETARGLGLKVHIEGYSPPQDPRLNVIRVAPDPGVIEVNVHPAHSWEECVSITTAVYEEARQCRLGADKFMIDGKHAGTGGGNHVVVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD54</accession>
    <name>A0A2M9PD54_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">3-dehydroquinate dehydratase</fullName>
            <ecNumber evidence="6">4.2.1.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_08345</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes a trans-dehydration via an enolate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000440">
        <property type="protein sequence ID" value="PJN95466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018509">
        <property type="entry name" value="DHquinase_II_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21272">
        <property type="entry name" value="PTHR21272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01029">
        <property type="entry name" value="DEHYDROQUINASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7262" checksum="0BB930A77C3E8B1D" modified="2018-04-25" version="1" fragment="single">MAQRVTVLNGPNLNLLGKRQPEIYGRETLADVERDCAALAAELGVEVVFLQSNWEGQIIDWIHEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA9</accession>
    <name>A0A2M9PDA9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_07920</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Nucleus membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000411">
        <property type="protein sequence ID" value="PJN95535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006488">
        <property type="term" value="P:dolichol-linked oligosaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013969">
        <property type="entry name" value="Oligosacch_biosynth_Alg14"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08660">
        <property type="entry name" value="Alg14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0256">Endoplasmic reticulum</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16951" checksum="9C5EB5B4605A05FB" modified="2018-04-25" version="1">MSKTPRKIMAIASGGGHWVQMRRLKPVFEGAEVFYVSTDPSSAGDVPGHRYYSIRDVSRRDRLGFAVLIAQLLRILVRERPDVVITTGSAPCLFALGLARKLFGARTIWIDSVANAEKLSSSGAQARRVADVWLTQWEHLAKPDGPQYWGSVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC2</accession>
    <name>A0A2M9PDC2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000418">
        <property type="protein sequence ID" value="PJN95518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025048">
        <property type="entry name" value="DUF3987"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13148">
        <property type="entry name" value="DUF3987"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="417" mass="44912" checksum="77B0FA0460928557" modified="2018-04-25" version="1">MNAESPFTPEAPQPLLREIPPGEPYPVAALGPLRSAVEAVQGMTLAPIAIPAQSALSVASLAVQGFANVETLGGPRALSLYCLTIAKSGERKSSCDAPLLAGLRAFEKEQAHDQREAHAAWMNAHALWKGDRERVLAEAKRGKGEKRHGAEADLHELGKEPAAPPSPDRTVTEPTFEGLTRKFAEGMPSLGIFSDEGGQFLGGFAMNSENRQKTLAALNDLWQGNPIRRTRAGEGSFTLYGRRLAMHLMVQPGVARAFMSDPMAGDTGFLPRFLICEPASTIGGRMQAEVRQDDRALDGFRVRLVDILRTPLPMDEETRELTPRLLPLMGQARRLLVAFSDAVEAAQAPGGAYAHVTAYASKAAEQAARIAGVLTLWENVWEQELSAEAMAAGIELVACEERLAFMRPGFGVWVAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC9</accession>
    <name>A0A2M9PDC9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA topoisomerase (ATP-hydrolyzing)</fullName>
            <ecNumber evidence="2">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">parC</name>
        <name evidence="7" type="ORF">CNY89_07845</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000406">
        <property type="protein sequence ID" value="PJN95546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00187">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.268.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.199.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013758">
        <property type="entry name" value="Topo_IIA_A/C_ab"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013757">
        <property type="entry name" value="Topo_IIA_A_a_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002205">
        <property type="entry name" value="Topo_IIA_dom_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00521">
        <property type="entry name" value="DNA_topoisoIV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00434">
        <property type="entry name" value="TOP4c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="TOP4c" evidence="6">
        <location>
            <begin position="22"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="626"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="626" mass="69495" checksum="1122B4192CA12F49" modified="2018-04-25" version="1" fragment="single">MADETDDGDMPPDPVNERETAEVLTKALGDRYLTYALSTIMHRALPDARDGLKPVHRRILFAMRGLRLDPTSAFRKCAKIVGEVMGNYHPHGDSSIYEALARLAQDFNVRYPLVDGQGNFGNIDGDNPAAQRYTEARLTTAAAALMEGLAEDAVDFRDNYDGSEREPVVLPAAFPNLLANGSSGIAVGMATNIPPHNIEEVVNACLHLVKSPGATDEALLDHVQGPDFPTGGIIVEPRASIKETYRTGRGSFRLRARWTQEDLGRGQWQIVVTEIPYQVQKGKLIERIADLVNAKKIPILADVRDESAEDLRIVLEPRSRTVDAQVLMEMLFKASDLETRFAMNMNVLIDGRTPKVCSLREVLRAFLDHRRDVLLRRSRYRLAKIDARLEVLEGLLVAYLNLDRIIAIIRTEDEPKPVMMAEFALTDVQAEAILNTRLRALRKLEEMELRAERDALVIERAGLAALLADEALQWKRISEELREVRKTFGKGSKGGARRSEFDDAPEVQEIAFEAMVEREPITVVCSQMGWIRAMKGHLAPETELKFKDGDGPGFFLHAETTDKLLLMASNGRMFTLACATLPGGRGMGEPLRLLVDLPNEAQPLALMVYRPGGRLLLASDAGDGFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE3</accession>
    <name>A0A2M9PDE3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000394">
        <property type="protein sequence ID" value="PJN95571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014315">
        <property type="entry name" value="ABC_heterocyst_DevB"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02971">
        <property type="entry name" value="heterocyst_DevB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="146"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="375" mass="39169" checksum="6CCD1463CCCF0A87" modified="2018-04-25" version="1" fragment="single">LLVLLLPVVMFSGGVIGMYFQPPALRQFYALTGLQPGGGTASPIALPPEIALPQEMAETLLPTDVVGLARLMPRGDVAIVAAPYGSGDARVAEILVAVGDRVSRGATVAMLDNREALEGAVLTAEADLAVRQATLAQSRSATASSRAEAQATLDQARAAAREAETNLVRTEDLAGRDIATSAALDAARTAAEEARLAVQRSEATLARYSFGDLDQQPDVLVASRNVLSAEAGLARARMDLARAEVRAPIDGTILDIHATPGQRPPTEGVMEMGDTDRMMAEVEIWQDRIRAVAIGQPVELAAGALDRSLLGTVERIGLTVGRQGLISDDAAANSDARVIRVLVALDADSSRLAARYVGLEAVARIDTGAVARAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ7</accession>
    <name>A0A2M9PDJ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Adenosine deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07470</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000378">
        <property type="protein sequence ID" value="PJN95606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019239">
        <property type="term" value="F:deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001365">
        <property type="entry name" value="A_deaminase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006330">
        <property type="entry name" value="Ado/ade_deaminase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43114">
        <property type="entry name" value="PTHR43114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00962">
        <property type="entry name" value="A_deaminase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="A_deaminase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12808" checksum="76C4B5862526ADE0" modified="2018-04-25" version="1" fragment="single">VTRIGHGVRAVEDQGLVARLAEEEVTLEVNPGSNLALGLYPDWAAHPVDRLRRAGVAVTLSTDDPPYFHTDLPREYAALSEAFAWTPADFARINRAALAAAFCDAPTRTRLLSQLDPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN4</accession>
    <name>A0A2M9PDN4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000356">
        <property type="protein sequence ID" value="PJN95661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857796" evidence="1">
        <location>
            <begin position="18"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15419" checksum="EFEDF67BEE4C6B78" modified="2018-04-25" version="1">MRLLLAALIALPLAGFAAEPGPAPISGLVDIPQEEWTRMTAGRTLTYTIGGAFWARERYHPGSDRVTLQFYDGMCLDGTWSWHDGLYCFDWEREGVSCFRHARLGGEVLILETRDGIETGAIQVMSGVSDLPVSCGPEAIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ5</accession>
    <name>A0A2M9PDQ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Toxin CcdB</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Cytotoxic protein CcdB</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Protein LetD</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07015</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CcdB toxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000346">
        <property type="protein sequence ID" value="PJN95687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008657">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006276">
        <property type="term" value="P:plasmid maintenance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002712">
        <property type="entry name" value="CcdB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011067">
        <property type="entry name" value="Plasmid_toxin/cell-grow_inhib"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01845">
        <property type="entry name" value="CcdB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11100" checksum="87ACA8F1DA72760B" modified="2018-04-25" version="1">MSRGVARQFDVFRLPGDVLVVAIQSDLLDAMATRVVVPLLPAGAAGPPMRGLNPEIRLGEERLILTPQLAATLTLRELRQPVGSVAHLRDEITRAIDILLTGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE12</accession>
    <name>A0A2M9PE12_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Long-chain fatty acid--CoA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000319">
        <property type="protein sequence ID" value="PJN95753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="18"/>
            <end position="475"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="654" mass="72034" checksum="7753B59459CC9083" modified="2018-04-25" version="1">MTTDGAPAEFDTFPKLLARNARSFGERPAYREKEFGVWQVWTWAEAERQVLDLAAGLHALGLRPGDHLAVIGRNRPALYWAMTAAQCCGAIPVPLYQDAVAEEMAFVLDHCGARFVIAGDQEQVDKVLEIQGRLHALERMIYLDPRGLRGYDHRHLHAYTEVQAAGRAAPEAVHAGIRARIASQAAADVCVMLYTSGTTGKPKGVVLSNRNILATAQASCAFDKLTEAENVLAYLPMAWVGDFIFSMGQAYWAGFCVNCPESAATMQSDMREIGPSYFFAPPRFFEGLLTNVMIRMEDASRPKRAMFRHYMDLARRVGPALLDGAPVSAGDRLAYRIGEALVYAPLKNALGLSRVRVGYTAGEAIGPEIFAFYRSLGINLKQLYGQTEASVFITQQPDGEVRADTVGVPSPGVEIRIAPSGEVFYRSPGTFVEYYKNPESTASTKDAEGWVATGDAGFIEPESGHLRIIDRAKDVGKMADGRLFAPKYVENKLKFFPAILEAVVFGDKRAMATAFVNIDLTAVGAWAERHDIAYASYQELAQHPKVTEMIAGHVEEVNRALADDPMLSGCQIHRFLILHKELDADDGELTRTRKVRRRIIEEKYADLIAALYDGSPKVYTETEVTYEDGRKGRLKATLAIRDVKRAPEAARAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE35</accession>
    <name>A0A2M9PE35_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FGGY_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000303">
        <property type="protein sequence ID" value="PJN95796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGGY_C" evidence="1">
        <location>
            <begin position="30"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14231" checksum="82BBA1BC8F5D035C" modified="2018-04-25" version="1" fragment="single">DLDVHARQQQPVGVLELQPQQHDAGLLVHMRVDGGMTANDWMLQGLADTLGAAVDRPKVAETTALGAAWLAGMKAGLYPGPAEFARSWALDRRFEPQADETRREAKYAGWLDAVRRTLSRPDPTREELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE38</accession>
    <name>A0A2M9PE38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">S-adenosylmethionine-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MT-A70-like family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000309">
        <property type="protein sequence ID" value="PJN95778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090304">
        <property type="term" value="P:nucleic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007757">
        <property type="entry name" value="MT-A70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05063">
        <property type="entry name" value="MT-A70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51143">
        <property type="entry name" value="MT_A70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="23795" checksum="36B59EC432C22CA7" modified="2018-04-25" version="1">MTTDAAQDLTQALAGRRFGTVLADPPWRFVNRTGKVAPEHRRLSRYGTMPVEEIAALPVAAHLEDPAHCYLWVPNALLPEGLQVLAAWGFEYKSNIVWHKVRKDGGSDGRGVGFYFRNVTELLLFGTRGRNARTLQPGRRQVNLFGTRKREHSRKPDEQYGIIEGCSWGPYLELFGRGVRKGWTVWGNQADEDYKPDWATYAYNSGSVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE46</accession>
    <name>A0A2M9PE46_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000303">
        <property type="protein sequence ID" value="PJN95793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9818" checksum="7ADAAB6DE36734B3" modified="2018-04-25" version="1" fragment="single">ATLRGLYGRDTDRPITDVSALVGLRPREGWMAMLSASRYADDEGVYVKLTPSLGYELRPDLWLVPHLTQEFSDDRSTGLGVSVWWSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE52</accession>
    <name>A0A2M9PE52_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">Glucose-1-phosphate thymidylyltransferase</fullName>
            <ecNumber evidence="4 5">2.7.7.24</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rfbA</name>
        <name evidence="7" type="ORF">CNY89_06270</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>alpha-D-glucose 1-phosphate + dTTP + H(+) = diphosphate + dTDP-alpha-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:15225"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37568"/>
            <dbReference type="ChEBI" id="CHEBI:57477"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="2.7.7.24"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the glucose-1-phosphate thymidylyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.24" evidence="4 5"/>
    <dbReference type="EMBL" id="PHNO01000295">
        <property type="protein sequence ID" value="PJN95816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008879">
        <property type="term" value="F:glucose-1-phosphate thymidylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045226">
        <property type="term" value="P:extracellular polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02538">
        <property type="entry name" value="G1P_TT_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005907">
        <property type="entry name" value="G1P_thy_trans_s"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43532">
        <property type="entry name" value="PTHR43532"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01207">
        <property type="entry name" value="rmlA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="6">
        <location>
            <begin position="8"/>
            <end position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="32089" checksum="0D2FC1D22396DDCF" modified="2018-04-25" version="1">MSTEKARKGIVLAGGSGTRLYPITHSISKQLLPLFDKPMIYYPLSVLMLAGLREVAIITTPADQDQFRRLLGDGSQWGMEIGYISQPKPEGLAQAYVLAEEFLDGAGSTMVLGDNIFFGHGLPEMLQSAGAKETGGTVFGYQVSDPERYGVVAFDNTGKVLSIEEKPAVPKSNFAVTGIYVLDGTAPARAKALRPSERGELEIADLINLYLAEGELTVERMGRGYAWLDTGTHASLLDAGNFVRTIEERQNLKVGCPEEIAHAKGWIDADALRQLAKPYLKTEYGRYLMRVADGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE56</accession>
    <name>A0A2M9PE56_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000299">
        <property type="protein sequence ID" value="PJN95803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9231" checksum="7F878BA6EB675DEC" modified="2018-04-25" version="1" fragment="single">MEFREHPLLNTPSLTAMILHMTDQGPASVESFAARLDTVLAEAEERPEVTSGEIRDHISALAEDLAAAGILSRQGGAYALTARGRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE93</accession>
    <name>A0A2M9PE93_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF485 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000280">
        <property type="protein sequence ID" value="PJN95861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007436">
        <property type="entry name" value="DUF485"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04341">
        <property type="entry name" value="DUF485"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11203" checksum="91C13FAF96334CB2" modified="2018-04-25" version="1">MTDPTTERIKADPRFRAIADRRNRLAWTLFGITMALYFSLILTATFNPAALSVPLYPGAAVTVGWPIGAATIIIPWLLTIYYVRQANSESQALSTIVSEAMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED0</accession>
    <name>A0A2M9PED0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06065</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000283">
        <property type="protein sequence ID" value="PJN95854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="24"/>
            <end position="31"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="21914" checksum="399092182BCC7C50" modified="2018-04-25" version="1" fragment="single">MGERPVLESVDLTARRGEVLVVLGPSGCGKTSLLRLISGLIVPDRGSVLIEGASPVPGEATAMVFQSYRLLPWKTVRGNLAFALPHLPPTERTARVEAALALVGLTRFANAWPRELSGGMQQRAALARALAARPRLLLMDEPFAALDAQTRELMQTGLLRLTGAAGGPTVVFVTHSVDEALLLADRILLLSPRPGRVVEELSVPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE9</accession>
    <name>A0A2M9PEE9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_05670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000259">
        <property type="protein sequence ID" value="PJN95916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="334" mass="36182" checksum="21FFB8FBCEE53992" modified="2018-04-25" version="1">MGAFQLRNVNKSFGATTIIPNLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLEDTTSGKIIIDGRDVTNESPAKRQLAMVFQSYALYPHMTVGKNIAFPLKMAGEDQATIDKKVSNAARILNLTNYLERRPGQLSGGQRQRVAIGRAIVRNPAAFLFDEPLSNLDAALRGTMRLEISELHQQLGKTMIYVTHDQVEAMTMADKIVVLQAGNVEQVGSPLELYRNPVNKFVAGFIGSPTMNFITGAEAARHGCKTIGVRPEHIRISTDPVPGVWQGTVGVAEHLGADTFLHVDAGELGTLNVRGSGEVPVHHGDTVWLTPDPSRIYRFDADGKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES7</accession>
    <name>A0A2M9PES7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000207">
        <property type="protein sequence ID" value="PJN96067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9411" checksum="8C8BF5BBDCE91E59" modified="2018-04-25" version="1" fragment="single">SEALRSGVGGALLPLLSEQFGAPLKVKVTPFGMRAELTVPVNQVVSSELPGLGVVLRLDPGRGEAGVQIEARAQDQAPDSEISGSEAGRSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY6</accession>
    <name>A0A2M9PEY6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000202">
        <property type="protein sequence ID" value="PJN96086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010297">
        <property type="entry name" value="DUF900_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05990">
        <property type="entry name" value="DUF900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="325"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="336"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="47557" checksum="CAF841EE2BDF1C53" modified="2018-04-25" version="1" fragment="single">ALAACGPRGALFLADLPGGRPYEIFVGTARTPDKGPNGFGPLRDAHVSYGRFVISVPSERALGTVVFPKALPPDPKTDFFTLEAVRFRDEDAFLASINARLAGRPAVQRSLTVFTHGFNTNFAEGLFRQAQMMTDFDSPGVGVHFAWPSAAGVRAYAYDRESAIFARDALQKMLEGLSRTNSNDILVAAHSMGAMVLMETLRSMALAGSPRFFQKLRAVVLIAPDIDVDVFRAQAIPIAAQDVQFYIFYSTHDRALLASAILRGGGSQRLGRLTDPAMLEGLPVELIDTSKAEGTDKLGHFALATSPALIAMVRGMNEQGNQIFADAAHRRPYHRRVRGGADDRRRDSGRDQGAVDRDLRFRRDPALARGASAGGGNAGLLLCRDPRDDAAGRAGLAGQGMRRGPAGAVPAITRDNGVNLLNINDNSNSVYRNETGVDEILP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ6</accession>
    <name>A0A2M9PEZ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Polar amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_04395</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000189">
        <property type="protein sequence ID" value="PJN96125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="190"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="21"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="223" mass="24343" checksum="35F4FE7DEA653793" modified="2018-04-25" version="1">MGYAWDFSWLAPYLPDLAAGVLVTLELIFLGSVVGVSLGTLCAWTRALGPAWAKSVVGVYVELIRNTPFLIQLFFIFFGLPALGLKLTQFQAATLTMVVNLGAYSCEIIRAGIQATPRGQFEAGASLAMSPIQTFVHVVLTPSLQRIWPALSSQIVIVMLGSSVVSQISVEELTFVASYIQSRNFRAFETYIVSAAIYLALAILLRMFLGWVGGLIFRRKAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC3</accession>
    <name>A0A2M9PFC3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TIGR01620 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03765</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0283 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000158">
        <property type="protein sequence ID" value="PJN96238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021147">
        <property type="entry name" value="DUF697"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006507">
        <property type="entry name" value="UPF0283"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39342">
        <property type="entry name" value="PTHR39342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05128">
        <property type="entry name" value="DUF697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008255"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6960" checksum="A7EE4AFEF3187EA2" modified="2018-04-25" version="1" fragment="single">IGSVAGGHLFTRLSRRFGEGVVNGALTARVGIAAMEVCRPLPFVALPRPKVSNIIGRALTGLFQKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE7</accession>
    <name>A0A2M9PFE7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Sulfotransfer_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000143">
        <property type="protein sequence ID" value="PJN96280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfotransfer_1" evidence="2">
        <location>
            <begin position="139"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="267"/>
            <end position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="315" mass="35292" checksum="FEE8DF119222447A" modified="2018-04-25" version="1">MRLRWSSHATFRQEMASLFPATFQSPSSPCFSRCSRGMRTLRDARPFPPRFPPPSQIALTFSRRRATQGPQLRPGPAMTSLPSEPIGISFPKAGRTWVRSVLNKAGAPLTFTHAGNGSQGWELGRPFEGVPAEHATRPVLFLHRNPIDTAVSFFFQVTKKDFARGTLKYWQRWPRLWARGALPPEDVDAFVLHPTYGVEKICRFNRGWLDHVEARPDSRVVTYEGLRADPVPGFTDIVQWLGRPTDRVEMAIEAKSFAAMKARELSRPQHGGLDKRREEGARKARKGKIGGYADTLRPETVEAASAIAGRFGFPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI1</accession>
    <name>A0A2M9PFI1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Hybrid-cluster NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03350</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000135">
        <property type="protein sequence ID" value="PJN96305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="6">
        <location>
            <begin position="11"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="5">
        <location>
            <begin position="271"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="336"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="336" mass="36780" checksum="4327B1DDE18E4C1C" modified="2018-04-25" version="1" fragment="single">MPRLGGARVWKDDEPLECVSVVPDGDNVVSFSFRAPSGAWFDYLPGQFLTLELPTPGGPIHRTYTISSSPSRPLSITLTVKAQEGSLGTRWMFENLREGMRIKAIGPGGIFVPETSSERKLLLISAGSGVTPMMSITTYRWDLGGQPDICFVQCARRPSELVFRRHLEHMAARVPSIKLHYVVGEDDPHGAWTGYRGKFNQLMLGLMAPDYLEREVYCCGPERFMQDVRDMLIGFGFNMEHYHQETFTAPVLTEADAPVLDDVTPSAEAASEVVFSLSGKSIPCTEADTILAVSRMAGLNIPSGCTFGVCGTCKTKKLSGEVHMVHNGGISEDDIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR7</accession>
    <name>A0A2M9PFR7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lysozyme</fullName>
            <ecNumber evidence="3">3.5.1.28</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.28" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000110">
        <property type="protein sequence ID" value="PJN96393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008745">
        <property type="term" value="F:N-acetylmuramoyl-L-alanine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06583">
        <property type="entry name" value="PGRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036505">
        <property type="entry name" value="Amidase/PGRP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002502">
        <property type="entry name" value="Amidase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015510">
        <property type="entry name" value="PGRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006619">
        <property type="entry name" value="PGRP_domain_met/bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11022">
        <property type="entry name" value="PTHR11022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01510">
        <property type="entry name" value="Amidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00701">
        <property type="entry name" value="PGRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55846">
        <property type="entry name" value="SSF55846"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGRP" evidence="2">
        <location>
            <begin position="2"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15324" checksum="23F980E2E1F905C7" modified="2018-04-25" version="1">MWEIVIHCTATPEGRDVSVETIRGWHRKNGWSDIGYHYVVALDGTIQPGRPEAVIGAHVSGHNAGMIGISYVGGCDAKMQPKDTRTPAQRDALMAACRALIAKYPTIAKVSGHRDYDAGKACPSFDVRKDPLSDLPKEARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS6</accession>
    <name>A0A2M9PFS6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">L-lactate permease</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_02755</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Transports L-lactate across the membrane. Can also transport D-lactate and glycolate.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the lactate permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000107">
        <property type="protein sequence ID" value="PJN96403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015129">
        <property type="term" value="F:lactate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003804">
        <property type="entry name" value="Lactate_perm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30003">
        <property type="entry name" value="PTHR30003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02652">
        <property type="entry name" value="Lactate_perm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00795">
        <property type="entry name" value="lctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="129"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="158"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="199"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="234"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="259"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="323"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="370"/>
            <end position="387"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="407"/>
            <end position="428"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="448"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="536"/>
            <end position="554"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="560"/>
            <end position="578"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="592" mass="62557" checksum="2EE217B459B8BE83" modified="2018-04-25" version="1">MPATVIFLFALLPVATVFLLLVVLERSAKFSMAVAYVVTVLMALFVWGTEYTKVMGATVNGVVTAVSLLYIVFGAILMLYTLEESGAIRAIRGGFTRISPDRRVQCIIIAWLFGSLIEGASGFGTPAAIAAPLLVAIGFPAMAAVMVTLIIQSTPVSFGAVGTPILVGVRTGLADQAIVDQTIAPMAFFDYLLQITVKVATIHGLIGFLIPLIMIGMMTRFFGANRSFAEGFRIWKFALFAGVAFTVPYYLIATLLGPEFPSLVGGIIGLLIVVPAAKRGFLVPKETFDFPPRNQWDSAWVGKLDDLEDRHAKAPLMSLGKAWAPYVAVVLLLVLSRAVPPVKAFLTSPDMTIAFRDLFGSGINATVQPLYLPGTILILVSIFTYFLHRMKPSDYGLALKSSGSTMIAAAPALLLAVPMVQVFINSASEHLASMPIILAQGVSAVTGQAWPLFAPTVGAMGAFVAGSNTISNMMFSLFQFSTAEQIGLGASGAAIVVAAQAIGGAAGNMICVHNVVAASATVGLVDREGEIIRRTLIPTFYYIVQGGLIASALIAGGFNAWWIAAIAWAAGVLTVMAFNRGRPVPVATAPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV2</accession>
    <name>A0A2M9PFV2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptidylprolyl isomerase</fullName>
            <ecNumber evidence="6">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_02575</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000099">
        <property type="protein sequence ID" value="PJN96437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046357">
        <property type="entry name" value="PPIase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001179">
        <property type="entry name" value="PPIase_FKBP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005215">
        <property type="entry name" value="Trig_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008880">
        <property type="entry name" value="Trigger_fac_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037041">
        <property type="entry name" value="Trigger_fac_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30560">
        <property type="entry name" value="PTHR30560"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00254">
        <property type="entry name" value="FKBP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05698">
        <property type="entry name" value="Trigger_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00115">
        <property type="entry name" value="tig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50059">
        <property type="entry name" value="FKBP_PPIASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase FKBP-type" evidence="7">
        <location>
            <begin position="86"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="372" mass="40539" checksum="93160ADFCD734A4C" modified="2018-04-25" version="1" fragment="single">DETGDRPALQPEVKVTNPDWKEGEDVEVALTYEALPEVPEVDFSALTLEKLTVAPDEAAVAEALDNLAKSTGSFEDRAEGAAAEDGDQVVIDFKGSLDGEPFEGGSADDFPLTLGSGSFIPGFEEQLVGVTVGEARDVTVTFPAEYGAPHLAGKDAVFAVTVKAVKSPKPAEIDDALGERYGAENLEGLKARIGERLSAEYDQASKAVLKRKLMDALAERVSFDLPPTLVEVEANQIAHQLWHDENPHVHGHDHPQIETTDDHKRLAERRVRLGLLLAEVGNRNEITVSEQEMQRAVIAQARQYPGQERQFIEFIQKNPQAIQQLRAPLFEEKVVDHILSLAQVSETAVSKDDLQKAVEALDEDVATEVVVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX6</accession>
    <name>A0A2M9PFX6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000091">
        <property type="protein sequence ID" value="PJN96460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12251" checksum="1F2529FB620A3E7C" modified="2018-04-25" version="1">MRLVTALRRIEAELRDLDSEAGKVMLRQIVLRVDVNEWRASKAPATISEIAQRHGADVADVSREMQPAFLAPSLVEQILDGRQPAALTANRLRRIGDLPLLWDEQAEALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG31</accession>
    <name>A0A2M9PG31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000077">
        <property type="protein sequence ID" value="PJN96507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11396" checksum="AFD0DD21AAB5C250" modified="2018-04-25" version="1">MTDATEASIAARRTTLSADYRTHGFATTTLDASIREQLTLVLEISSGQRLFLCEYDMQTERARLAAARHNLNLMIGAKVYLDGWYSAEIAAAVDAGFAPQPERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG49</accession>
    <name>A0A2M9PG49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aspartate aminotransferase family protein</fullName>
            <ecNumber evidence="3">2.6.1.18</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.18" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000076">
        <property type="protein sequence ID" value="PJN96516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016223">
        <property type="term" value="F:beta-alanine-pyruvate transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1 2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="441" mass="47376" checksum="66EFD8F38E7EFA2B" modified="2018-04-25" version="1">MSQRTAAPNDLRAFWMPFTANRQFKAAPRMFVAAEGMHYTTSDGRQVLDGTAGLWCCNAGHCRPRITEAIRAQAGELDYAPAFQMGHPKAFELANRLVDMAPEGMAHAFFTNSGSESVETALKIAIAYQRAIGQGTRTRLIGRERGYHGVNFGGISVGGIVTNRKVFGTLLTGVDHMPHTHLPGVNAFSRGQPEHGAELADELERIVTLHDPSTIAAVIVEPVAGSTGVLIPPRGYLQRLREICTKHGILLIFDEVITGFGRTGAAFAADKYDVTPDMITCAKGLTNGVIPMGAVLTTAAIHDAFMTGPEHMIELFHGYTYSGNPIAAAAGIATLDVYREEGLFERAAALAPYWEAALHSLRDAPHVIDVRNEGLIGAVELEPIAGAPTRRAFQAFLDAYDAGILIRTTGDIIAMSPPLIIAEAQIDELVGKLRGVLEKLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG8</accession>
    <name>A0A2M9PGG8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000046">
        <property type="protein sequence ID" value="PJN96639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8353" checksum="3DE1064829158F68" modified="2018-04-25" version="1">MTRRATDNTKALDAFIAAKTEIDAMLERLAALSADHFETHPDEINWGHVGTLNHYRAKLREITDMAFSEGEHAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY8</accession>
    <name>A0A2M9PGY8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000011">
        <property type="protein sequence ID" value="PJN96809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06532">
        <property type="entry name" value="Glyco_transf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002654">
        <property type="entry name" value="Glyco_trans_25"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01755">
        <property type="entry name" value="Glyco_transf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="275" mass="29731" checksum="D079C8ED7E684518" modified="2018-04-25" version="1">MAETVQGGVGAGGLPVFLINLDRRPDRRDYMEAQLAAMGLPVTRISAKDAEVVPDAEIAAEVALSGHLIRMGRGSQCNALNHFEIMRRLVASGAPRPVVLEDDIELSPDLAGFARDGAWLPAGVGIVRLEKWSRRVTKKLLGPELGTSPVAGRSIRRLYSRVGGSGAYIVTRGAAERILAGKGILRHPIDHLLFNLNISPLAREVGVGMVVPALARQAWGRFSSDIAATRKAEPRPLSAQLRRGWYEVNLLPTQIGAVLFRGARPIQIDYAERTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ9</accession>
    <name>A0A2M9PGZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">8-oxoguanine deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000021">
        <property type="protein sequence ID" value="PJN96754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="52"/>
            <end position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="445" mass="47506" checksum="002B5A46DF991E3E" modified="2018-04-25" version="1">MTQRLWIRDPLAILAEGAGGGVVVDGAKIVELVPSGGRPMAPARVFDAARHVVLPGLVNTHHHFYQTLTRAHPAAINKELFPWLQALYPVWARLTPDALRLATRCALVELMMSGVTCSSDHQYVFPTGLEDALDIQADEAAALGMRMTLNRGAMNLSVKDGGLPPDSVVQDADAILADCERVVGKYHDRSDGAMLQVALAPCSPFSVTRELMEGAAQIANRCGCGLHTHLAETHDEDAFCLATFGQRPLDYLESVGWMGPRTWLAHGVHFDDGEIRRLGAAGVGVSHCPTSNMVLASGQCRTRELEAAGVKLGLGVDGSASNDSSNLMEGVRHALMLSRLTYDATVTHLDALRWATAGSAACLGRTDIGEIAVGKQADFALFTLDELRFSGAGDPLAALVLCGAHRADRVMIAGRWTVEDGLPVGVDLARLRAEHGAAARRFLEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH37</accession>
    <name>A0A2M9PH37_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ABC transmembrane type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00195</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000005">
        <property type="protein sequence ID" value="PJN96843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="105"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="227"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="249"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="109"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="334"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="381" mass="41484" checksum="204ABE83B915CDAE" modified="2018-04-25" version="1">MRGAGSGRRRMSRPAVAAGLRHDRRVATGSPRPVAASLPNPDTKRLRVRRLGVGVRPVRETAMLDRITARFDALYSPTALAENRQPPAGTAAFFRYFLDQFRGALWARFVFVAIGAVADAMMPVFVGWIVGMLATTAPGDLWAEHGGQLMAILAVVLLRPVSFFADQLARNHALTPNLVDLVRWQSHWHVVRQSWTFFQNDFAGRIGTKVMQAGEAIEMAVNTTIDAVWYAVVFLAVAVVVLAGMDPLLLVPIAIWLVAYAALFRWGMPRIDALSEEVSEARSVMTGRMVDSYANIQTLKTFADDGEEDAYVAEAVTAHVGVFRRLMQVFTLSRPSPRAARRPARSSRSPPGSAPASAPAPPPSCRRARASGAAAGNRRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH49</accession>
    <name>A0A2M9PH49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="15400" checksum="3B97FC3EB315DB74" modified="2018-04-25" version="1">MIGTRQYPLDGRQITRTFTVEVAAAASANTQYRLGRIPTTAAIIGGLSKIYWDDLASTGSPTIDVGLKAVNANVTTDVDALNDGLDVATAAGSASLIKDIANYGKQAWEFVAGVTADPGGELDLIVTILDAATNTGGTVTVELTIQTDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P445</accession>
    <name>A0A2M9P445_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004904">
        <property type="protein sequence ID" value="PJN92317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6650" checksum="7B3637E7213DC39A" modified="2018-04-25" version="1" fragment="single">GVDAARVQANAKEVGALLLGAVTTFIAGLWLDDAGVDAARVQANAKEVGALLLGAVTTFIAGLWLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P457</accession>
    <name>A0A2M9P457_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA polymerase III subunit epsilon</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004894">
        <property type="protein sequence ID" value="PJN92324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Exonuclease" evidence="1">
        <location>
            <begin position="3"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7341" checksum="8283C1E3D55A50AB" modified="2018-04-25" version="1" fragment="single">FSGDRIVELGAVELVNHMPTGRIFHRHVNPQRAVPAEAAAIHGLTTSFLADKPIFSQVVNDFLDFIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A4</accession>
    <name>A0A2M9P4A4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004770">
        <property type="protein sequence ID" value="PJN92360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7663" checksum="9DA934EF343324CB" modified="2018-04-25" version="1" fragment="single">LDFGIHVKDDLDAFSTGYGPKERVLIAAQQLAIAQSLGRPPLFAFLDFGIHVKDDLDAFSTGYGPKERVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B2</accession>
    <name>A0A2M9P4B2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PriCT_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004772">
        <property type="protein sequence ID" value="PJN92358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014820">
        <property type="entry name" value="PriCT_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08708">
        <property type="entry name" value="PriCT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PriCT_1" evidence="1">
        <location>
            <begin position="4"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7855" checksum="7C15EE8173C9A078" modified="2018-04-25" version="1" fragment="single">PEAVRSGERNDTLWRWTMAQARYCDDVDQLVDAAATWAGAFPDPLSSQEVEKCARSAWAYETSGRNYLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D0</accession>
    <name>A0A2M9P4D0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004674">
        <property type="protein sequence ID" value="PJN92397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="44"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7523" checksum="D11F56D715B6272E" modified="2018-04-25" version="1" fragment="single">DLIRDPRIAVAVTVAAVSYSIMNLVMTATPLAMVGCGFGPDPRSAHRRGGHGRGRLLFDHEPGDDRDAAGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V0</accession>
    <name>A0A2M9P4V0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004086">
        <property type="protein sequence ID" value="PJN92581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9080" checksum="0032F5C24E4F0228" modified="2018-04-25" version="1" fragment="single">YLDTQESRGLVPADHPSVVGAMRGVAMGEADLVVVVGRKLDGARPAAGCERGGLSRHAGEPRPRPRRPSFGRRRHARRGDGRGGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W4</accession>
    <name>A0A2M9P4W4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004107">
        <property type="protein sequence ID" value="PJN92569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_21" evidence="1">
        <location>
            <begin position="42"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9887" checksum="4F3924CB69BE8B82" modified="2018-04-25" version="1" fragment="single">PARRRRCIDHVRTKLDVSERLACRVLGQHRSTQRKTPKGRADDAALTAEIVALATEYGRYGYRRIAAMLQAAGWAVNVKRVERIWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X3</accession>
    <name>A0A2M9P4X3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004005">
        <property type="protein sequence ID" value="PJN92604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9333" checksum="BF16EBB8A12C4BDB" modified="2018-04-25" version="1" fragment="single">HALETIRTVSIAEDKGTTVTNDPTGDARTLFPIQAALGYDLAQSLFIGPNNLVVEGVTDYWILSSVSAYLAELGQPSLDEKLTLTPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y1</accession>
    <name>A0A2M9P4Y1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HHH_6 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004109">
        <property type="protein sequence ID" value="PJN92568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029460">
        <property type="entry name" value="DNAPol_HHH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14579">
        <property type="entry name" value="HHH_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HHH_6" evidence="1">
        <location>
            <begin position="37"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14579"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9000" checksum="FF6392C486555BF4" modified="2018-04-25" version="1" fragment="single">AWLKANHPVEFMAGVMNCDIHLTDKLGAYKQECDRLGIAIRPPCVNRSEATFTVQDGAIVYALGALKGVGVEAMRLITAARGAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P508</accession>
    <name>A0A2M9P508_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004003">
        <property type="protein sequence ID" value="PJN92605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003916">
        <property type="term" value="F:DNA topoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9651" checksum="A9BB67CD66DA51D8" modified="2018-04-25" version="1" fragment="single">GMVYTLKCWRLPLAGRNARGKAIVNLLPIPQGVGIAAIMPVDVPETEWATLQIMFATSDGDVRRNALDDFTNVMRNGKIAMKLPEGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C4</accession>
    <name>A0A2M9P5C4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003593">
        <property type="protein sequence ID" value="PJN92751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11432" checksum="30117DE8A10B557F" modified="2018-04-25" version="1" fragment="single">PDRLVVAAEGQILCEHPRVIQRSHHLPPRTIYDWRHYLAVIQRKPGALRNGAPFAELPEAFRRLQQHLLKRPGGDREMVDVLALVLQHDEESVLCAVDMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y0</accession>
    <name>A0A2M9P5Y0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ku protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003088">
        <property type="protein sequence ID" value="PJN92925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3685" checksum="785A781591A06A69" modified="2018-04-25" version="1" fragment="single">MRDEADYFGEVGAGKVEAGLMKLVTRLVDERTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P601</accession>
    <name>A0A2M9P601_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18640</name>
        <name evidence="2" type="ORF">CNY89_25120</name>
        <name evidence="1" type="ORF">CNY89_28330</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004030">
        <property type="protein sequence ID" value="PJN92593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003029">
        <property type="protein sequence ID" value="PJN92945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001489">
        <property type="protein sequence ID" value="PJN93749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="9211" checksum="808E9A51B0379C8A" modified="2018-04-25" version="1" fragment="single">PDALKKIASEGGKILPWPQDVMTAAFAAANEVYAETSAKNPTFKKVYDSMVAFRANQYLWFQFSEYTMDTFMMGQQRQGML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P664</accession>
    <name>A0A2M9P664_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">BMP family ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002871">
        <property type="protein sequence ID" value="PJN93009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Bmp" evidence="2">
        <location>
            <begin position="32"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13658" checksum="C0622A0216BB8262" modified="2018-04-25" version="1" fragment="single">MPLLGGAARAAEPLKVAAIYTVPVEQQWVSRIHKAATAAVERGEIEYVFSENVSNSDYERVMREYAEGGAQLILGEVFGVEDAARSVATDYPDTAFLMGSSFGPDPEVPNFSVFDNYIQDASYLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P684</accession>
    <name>A0A2M9P684_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">FAD-binding dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002816">
        <property type="protein sequence ID" value="PJN93029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9698" checksum="551E86F980B8EF81" modified="2018-04-25" version="1" fragment="single">MLRFFEKNTEVAFIDGNRVPDFHATPGAATGGRSVAAKPYDGRRLGPWIDKLRPPLDVISLGGMGVASGADLTWSAPRKSSLIAFVKLVTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P693</accession>
    <name>A0A2M9P693_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphopantetheine--protein transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002760">
        <property type="protein sequence ID" value="PJN93047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14063" checksum="DAF7AC1C604DC4DC" modified="2018-04-25" version="1" fragment="single">LAIISQKGGVGKTTLATALAVAAELDGKSVALFDLDPQASACFWADRRKASGKGETPVVRDVNHNRLPHILAAMEQAGCDLVVLDCPPVHRDIADEAIKAADIVLIPTRAEVLDIRAMTQTVRLVQQMNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A4</accession>
    <name>A0A2M9P6A4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002638">
        <property type="protein sequence ID" value="PJN93091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="8752" checksum="2C6365CCD48BA962" modified="2018-04-25" version="1">MRYKDLYDLSDLTKRCFRWKKRRNFLRYAYKAADVMGCPEIRQQVCRHVTWFNRAWEREADRVYGGLVTTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A5</accession>
    <name>A0A2M9P6A5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mrr_cat_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002729">
        <property type="protein sequence ID" value="PJN93063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039442">
        <property type="entry name" value="Mrr-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13156">
        <property type="entry name" value="Mrr_cat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mrr_cat_2" evidence="1">
        <location>
            <begin position="67"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="12631" checksum="B25F7263051A1578" modified="2018-04-25" version="1" fragment="single">MLPNRGYYERKTVRRAHEPFRSASGRDRRGKALHPLQALLAQYRSAARTEREKGTYFERLTIAFLEHDPIQVEQYDGIWTYAEWAKKKGWDGRDTGIDLVAKLRHEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K5</accession>
    <name>A0A2M9P6K5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type II secretion system protein E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002458">
        <property type="protein sequence ID" value="PJN93157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="38" mass="4167" checksum="C665BAC73FA41E85" modified="2018-04-25" version="1" fragment="single">DVLDYAGRTIDLIVQVGRKGGRRGVLEVFVPALQRAVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L4</accession>
    <name>A0A2M9P6L4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protoporphyrinogen IX oxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">CNY89_23060</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3 A + protoporphyrinogen IX = 3 AH2 + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:62000"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the HemJ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002436">
        <property type="protein sequence ID" value="PJN93167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02239">
        <property type="entry name" value="HemJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005265">
        <property type="entry name" value="HemJ-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40255">
        <property type="entry name" value="PTHR40255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03653">
        <property type="entry name" value="UPF0093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004638">
        <property type="entry name" value="UCP004638"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00701">
        <property type="entry name" value="TIGR00701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0349">Heme</keyword>
    <keyword evidence="14" id="KW-0408">Iron</keyword>
    <keyword evidence="15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="121"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00006501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00017504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN93167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="16419" checksum="0F32603A2A5DAA1C" modified="2018-04-25" version="1" fragment="single">YPWTKALHIVSMVAWMAGLFYLPRLFVYHAERGGPDDTTETFKVMERRLLRAIMNPAMIATWTFGLMLALTPGVVDWRGDGWFHVKLAAVAAMTWFHHWLGLRRKDFARDANSRSGRIYRAMNELPTLLLIVIVVMVVVRPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T4</accession>
    <name>A0A2M9P6T4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22550</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002317">
        <property type="protein sequence ID" value="PJN93230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4307" checksum="67EA372AB7E7E92F" modified="2018-04-25" version="1" fragment="single">TLPLAMTPGMAITVFLGTVVFSVVSGIVATRRLASADPADLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P702</accession>
    <name>A0A2M9P702_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_21665</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002092">
        <property type="protein sequence ID" value="PJN93331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0270">Exopolysaccharide synthesis</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="4">
        <location>
            <begin position="37"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="14145" checksum="9ABE0B877939EFEE" modified="2018-04-25" version="1" fragment="single">MFEVGFRTSRLSEVSVEGLAPVYSSPSLSSLYNRFFKRVLDVFLVLLAAPFVLPLVLLMGLMIRRDGGSAFYTQDRIGLNGETFRIYKLRTMVTDADAKLAAHLAADPEMRAEWEETQKLKNDPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F3</accession>
    <name>A0A2M9P7F3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001898">
        <property type="protein sequence ID" value="PJN93439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="20622" checksum="174423E6630CB04A" modified="2018-04-25" version="1" fragment="single">MRHYKLIATRETYRQLWSSTIPSYLETIPKALGTWSGGRGAPVQHLIPFEDEFGPIQWIAEFMAFGDDVIASMRGLQTVDLWLNEADTNPQDVLLAGIGRIGRWPGQKHFRGYPARTRAYGQVVCDFNAPDRDNWTHGVFHDLTRRKAIESEFRAVARLRIEGELREERPDATPEQRAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F4</accession>
    <name>A0A2M9P7F4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001864">
        <property type="protein sequence ID" value="PJN93463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9854" checksum="1A87A1F5027F53EF" modified="2018-04-25" version="1" fragment="single">MLGVIVCLALLSLLLSEWMWRAYPAANFFLIPTRAWELGVGSICAFLAHRGLRRESQVLSALGLGLILFAIFAFDEKTPFPSLYALVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I7</accession>
    <name>A0A2M9P7I7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glyco_hydro_32N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001844">
        <property type="protein sequence ID" value="PJN93479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018053">
        <property type="entry name" value="Glyco_hydro_32_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00609">
        <property type="entry name" value="GLYCOSYL_HYDROL_F32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="2">
        <location>
            <begin position="13"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="173" mass="19552" checksum="0C131BCAC4F75A15" modified="2018-04-25" version="1" fragment="single">MSSSEVDFRPVYHFTPEKNWLNDPNGLFYQDGVYHMFYQYNPEGSQWGNMSWGHATSTDLVTWTERDVALPYSAEEQIFSGSIVVDRANTAGFGYGPNGEAPIVAIYTANIPPQNGEPQDQEQALAYSLDGGYTWEKYDGNPVLDIADPEFRDPKVFWQDNPGDDDYWVMAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q1</accession>
    <name>A0A2M9P7Q1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001687">
        <property type="protein sequence ID" value="PJN93584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009841">
        <property type="entry name" value="VirC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038473">
        <property type="entry name" value="VirC2_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07181">
        <property type="entry name" value="VirC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="20137" checksum="B801E1B711BD51C5" modified="2018-04-25" version="1">MVEIRRPKKSYEEHRKAFAAAKGRQSNLGETKDTVTAEAGAEDAVGVEAPPKPPAASPVRELRQATRPKRAADGAGKVRLKFTLPAPMPGASAYFDRAVALMGDGKALRLVLARAFDEIEAAVDAGEEVIPGTYPVDPTRSANTSRHVSVALYVRAKQTLDPMDLLPPGSFGRELAMAALARFLRFVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U7</accession>
    <name>A0A2M9P7U7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19480</name>
        <name evidence="1" type="ORF">CNY89_19510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001633">
        <property type="protein sequence ID" value="PJN93622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001628">
        <property type="protein sequence ID" value="PJN93626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8647" checksum="7BBCD8D30BC80DFD" modified="2018-04-25" version="1" fragment="single">LDIGAHGHGEIAFGALQASLDLAYGHNDVAFDWEGDDDMHEVRGSGSAELLDDGSLEIEFEYHRGDDAILKAVRDTSSAAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z7</accession>
    <name>A0A2M9P7Z7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001604">
        <property type="protein sequence ID" value="PJN93648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005230">
        <property type="term" value="F:extracellular ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036734">
        <property type="entry name" value="Neur_chan_lig-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="21763" checksum="CFC8D16F444D8D7D" modified="2018-04-25" version="1" fragment="single">MRIVRQHQAKDLVLPSLALFRLAFLLCVCVLATAFPAAARDVEVGAYVTSLSDVSARDGSFRVGFYVWFNDPEGRFNLQRDLYFVARSVSISEVETEQTPDGGTYTYARIEAVVPHEFEMTDFPFDRQQLTLRIEAEDAEDLNFVPDLDSTGASEYLKLLGWTLGRGKYDDASASRLPYDVSERAPASPGSAAYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P844</accession>
    <name>A0A2M9P844_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001526">
        <property type="protein sequence ID" value="PJN93714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15323" checksum="74EAF297F424FB2A" modified="2018-04-25" version="1" fragment="single">CDLVIDGSIKLVSGRQIERLSETGVVLDDGTELPADLVVYATGYGSMNGWVADLIDRETADRVGKVWGLGSDTPKDPGPWEGEQRNMWKPTQVANLWFHGGNLHQSRHYSQYLALQLKARQEGLPTPVYGLQEVHHRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P874</accession>
    <name>A0A2M9P874_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001517">
        <property type="protein sequence ID" value="PJN93723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="14159" checksum="BC26E6686BE8B6B5" modified="2018-04-25" version="1">MAVAGRSVAIVGAGVGGLAAGIAACSEGSAGLRDGVAALPDCAPYAVTKAALRHMAKVLALELGPFGITVNALGIGATVNARNLAGDADYEARWSAVIPTRRCGRPEDAAAALMYLVSPGASMVSGHTLMLDGGWSGVGDVPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B7</accession>
    <name>A0A2M9P8B7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001458">
        <property type="protein sequence ID" value="PJN93781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016884">
        <property type="term" value="F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10925" checksum="7CA159A2E1516893" modified="2018-04-25" version="1" fragment="single">MTVYEYKVTPAPRQVKKVKGLRGAGEMFAHTLAEAINHAAREGWDYVRAETLPAEGPSGWFRRGTRSDGKQAANWVINELFGRLNKEGRGIETSPIAPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D7</accession>
    <name>A0A2M9P8D7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18445</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001459">
        <property type="protein sequence ID" value="PJN93780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="24056" checksum="0829A4A3765F68F9" modified="2018-04-25" version="1" fragment="single">TKRYAPGSPLGVHTARNGFVASDLKAKRVTVYLLVPSSLLASSLPWLNLLVGVFGTAIGRPGPRSPVTLLIDEAPALGFLPDLRAHMAQFRKAGLRVWLFTQTYAAMAGPELYGETGMKEIMGLTTVKQFFSVEEPEVQKLVSELCGMRSVANPSTSGTIGDVGQPLIRPDEVRGLKKWHQLLIVGGLRYPIRAKLVPYFGRRAWRSLVDPNPYRSTKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I2</accession>
    <name>A0A2M9P8I2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001417">
        <property type="protein sequence ID" value="PJN93829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9788" checksum="F214EB1B903E5C87" modified="2018-04-25" version="1">MPSLFDCLESAIQNQLVRNPGMARQTQGDFQDLVGKLSAAYPLNVAQGKAAAILKEAAARGAASRRHTVIAQLMTAQRNTALISRAPTTAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z4</accession>
    <name>A0A2M9P8Z4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001275">
        <property type="protein sequence ID" value="PJN94005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="8"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="308" mass="33468" checksum="0C364AAFEF6FF30A" modified="2018-04-25" version="1" fragment="single">AFEVSKASLTVHVLPDDRQTVIANTELAITAFLKKLMGEQSAFVICEASGGYERQVLLCCAALGLPVHRAHGSRTRNFAKYLGLSAKTDAIDARMLALFAQRSEDLRLWEPPSPETVELRALRRRRDDLAQMVRIEKNRIEHAHVEAIVLSLNRHVLILGEEVAELDARIASLIAATPTFRHRSDLMQSVKGIGAATAAACLAYVPELGSLTKGEAAAIVGLAPHAQDSGKTQGQRRITGGRREVRANLYMAALSALRWDPGMKAFAARLKAAGKPSKVVIAAVMRKLIVILNAVLRTDEPARGMRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P907</accession>
    <name>A0A2M9P907_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001260">
        <property type="protein sequence ID" value="PJN94023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9110" checksum="8B7486A4788A5801" modified="2018-04-25" version="1">MADSNDRLEPSPRPGKATAEQGVVLLDCPRGAVVTLTPEAAEATSESLRRAAALAEDQRNAARVTEDMNLRRLRPDPPSSPSDADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P913</accession>
    <name>A0A2M9P913_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ubiquinone-dependent pyruvate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001251">
        <property type="protein sequence ID" value="PJN94038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="1">
        <location>
            <begin position="4"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="17782" checksum="ABBF41DAFF44D709" modified="2018-04-25" version="1" fragment="single">MPANVAELFVETLERAGVGRIYGVVGDSLNALTEALRQRGAIEWIHVRHEEAAAFAAAGESQISGQLAVCAGSCGPGNLHLINGLYDAQRTRTPVLAIAAQIPSAEIGGGYFQETHPQDLFRECSVYCEMISDPRQMPYVLENAIRAAVGQRGVAVVVIPGDVALRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P924</accession>
    <name>A0A2M9P924_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16820</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001242">
        <property type="protein sequence ID" value="PJN94047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10785" checksum="3D413092E4A44D72" modified="2018-04-25" version="1" fragment="single">IDGASTFALYRRIIIPQLRPAFMSAFVVLAHMAIKSYDLVIALTGGGPGTATELPATFMYSYTFTRNQMGIGAASAVIMLMSIAAIMVPYIYSELREKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P948</accession>
    <name>A0A2M9P948_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001229">
        <property type="protein sequence ID" value="PJN94063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7653" checksum="28E4733F1D47ABBD" modified="2018-04-25" version="1">MLDRLEGRTEPPAESCARFNAGNLAHWQAGRARVCAIWSLCAVGSGENIGFGVGQTVLYEHPAGNFTTSACAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P952</accession>
    <name>A0A2M9P952_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type II toxin-antitoxin system prevent-host-death family antitoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phD/YefM antitoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001220">
        <property type="protein sequence ID" value="PJN94078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036165">
        <property type="entry name" value="YefM-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143120">
        <property type="entry name" value="SSF143120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9073" checksum="B75A81CF886FB9E1" modified="2018-04-25" version="1">MKEFAAADLTRKTGDLFEAATLAPVAITKHRKPRFVVMSMERYRALTKGENSQIAVDVAQMPEDIGELWDKGVDERIHDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C5</accession>
    <name>A0A2M9P9C5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001172">
        <property type="protein sequence ID" value="PJN94144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044999">
        <property type="entry name" value="CbbY-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42896">
        <property type="entry name" value="PTHR42896"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="23562" checksum="CE83E4A29774116F" modified="2018-04-25" version="1">MKALIFDVDGTLAETESLHLDAFNEAFAGAGLPWRWSEAEYTRLLTTTGGKERIARYVREAGGDPADFPIQALHRDKTVRYTGRIARGGIALRPGVAELIAEARALGLGLAVATTTSPENVEALVRATLGAGMTEIFPVVAAGDMVAAKKPAPDVYLLALARLGVPAADCVAFEDSRNGLLAAKTAGIFTVVTPGRFTAQEDFTGADRLVERLGPLASLGLAAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D5</accession>
    <name>A0A2M9P9D5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001174">
        <property type="protein sequence ID" value="PJN94141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="312"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="335"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="353" mass="38576" checksum="7234D72910366CA3" modified="2018-04-25" version="1" fragment="single">YVAMTFFGKLILQTAQAIPLAGISVDVSELKFDSPQWPLTLAFAFAGLAPMLPPLRIAEKWLRERAYRAVGIPVRIQQTTRNLVATLNEAARTAASADPAVPGAELTSLGAALNGYREELSRQIEASPWAGEFLASRRARRDELLNVGAELELLVDWAKSARGSWPGPEVSQHVREVESAHVKEADALLNEFRRRLHERDAVATPERNERADAYLLKTVERARRLRDELAALIAIFIERDPFDPDKPPRTKALAQLLHETEAPSRAGTGPETGVLLCLVVVFLLYTVFTWRGLNPLLTTSAETSNPKAVLFTAALETPRAPRRPAGPARDRRRGCCSASSSSSCSTPSSPGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K4</accession>
    <name>A0A2M9P9K4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001115">
        <property type="protein sequence ID" value="PJN94224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="293" mass="32422" checksum="FA1C477607DF8772" modified="2018-04-25" version="1" fragment="single">AAFADAPPDIIVIDPIRNLFDGGPEGGGENDNTAMMFFLKDRVELLREAVNPDAGVILAHHTRKASKHQVKDDPFLALSGASALRGFYTSGLLMHRPDEDSSVRRLEIELRNGPALPGKLIDKVKGEWVELNPLNERLVRKEVGAKLDAERLRKHDVILCMLLDEAASERLYTAMQFAETFENRGGLGSKHTIRERLSVLATKGFVKFLRDPSGFGFPVTRSRFGYLCVEGMQFGAPVEEVDPDTGEVTTQARPVLPSHFKCPQSGLCLQVENPAVWVYPEGLEDDLTHMSEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K5</accession>
    <name>A0A2M9P9K5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001128">
        <property type="protein sequence ID" value="PJN94202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="53"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10588" checksum="58CDE0ECBB17D270" modified="2018-04-25" version="1">MAVKRDEPEEIVLTLRQVESLQGQGRSIADAVRRIGVTQNSSYRWRKEYGGMSREQLKRLKALEAENRRLRRAVSDLTLDKMILAEAARGNF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q7</accession>
    <name>A0A2M9P9Q7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001075">
        <property type="protein sequence ID" value="PJN94278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11899" checksum="FF1A7100FA7157ED" modified="2018-04-25" version="1" fragment="single">MGQVHHGCATTTAAVRRAIQHSQESLRALAKRYGINQKTVAKWKKRTSVADLPTGPREPKSTVLSGDDEAITSPFRRHTLLPLDDCLYSLQATIPHLTRSSLHRCLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA20</accession>
    <name>A0A2M9PA20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_14835</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001013">
        <property type="protein sequence ID" value="PJN94385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="2"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="74"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="186"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="346" mass="38302" checksum="7140CB37AB06B9E0" modified="2018-04-25" version="1" fragment="single">LWSPQAPAARGGMGLSVTGRAVMYEEANRSIFGPVVFNCAAPDDGNIDVLARLATPAQQDEWLQPIIDGKVRSAFVMTEPAPGGGSDPGMIGTRAERQGDVWRVHGRKWFITGAAEAAHFILIARTDPNPEEKRRHLTAFLFHRDQPGWEIVRRIGIMGPEEHGGHCELAFEGLEIPDGARLLNVGDGLKVTQIRLGTARLTHCMRWLGLAKRAMSVAQDYVDAREGFGVRLAQRESVRLMLGKVAHDIQVGRLLTMQAAWKLDQGDFARKEVSMAKLHVADTLHTAADTAIQLCGAKGYSRDTVLEWIYRYARQARLVDGASEVHRMVLADAYARERDDFWSWGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA83</accession>
    <name>A0A2M9PA83_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pyruvate dehydrogenase (acetyl-transferring)</fullName>
            <ecNumber evidence="3">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14480</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer. Part of the PDH complex, consisting of multiple copies of pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000974">
        <property type="protein sequence ID" value="PJN94442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02017">
        <property type="entry name" value="TPP_E1_EcPDC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035807">
        <property type="entry name" value="PDC_E1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004660">
        <property type="entry name" value="PDH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43825:SF3">
        <property type="entry name" value="PTHR43825:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="4">
        <location>
            <begin position="47"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="421"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="421" mass="46449" checksum="6AF4D3250C1165C8" modified="2018-04-25" version="1" fragment="single">MRRLEEAARGAGVSALAQPFSAYRNTIPASAQGPYPGDLAIEERLTSIIRWNALAMVMRANRATGELGGHIASYASAAEIFETGFNHFFRARTEAFGGDLVFFQPHSAPGVYARAFLEGRLTEAQLGNYRQEVGGQGLCSYPHPWLMPDFWQFPTGSMGLGPINAVYQARFMRYLQARGLAETTGRHVWGVFGDGEMDEPESIAGLSLAAREGLDNLTFVVNCNLQRLDGPVRGNGQIIQELESLFVGAGWNVVKVLWGSEWDPLFAADRDHALLRRFAETVDGEYQTLGSKDGDYNRHRFFDADPATKALAEGMSDVEINALKRGGHDFRKLHAAFSAALAHKGRPTVILAKTKKGYGMGGAGESRMTAHQAKKLDIDALAAFRDRFDLPLSREELESLSLYRPAEDSPEMRYLRDRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA93</accession>
    <name>A0A2M9PA93_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Prolipoprotein diacylglyceryl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Lgt family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000964">
        <property type="protein sequence ID" value="PJN94456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008961">
        <property type="term" value="F:phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042158">
        <property type="term" value="P:lipoprotein biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001640">
        <property type="entry name" value="Lgt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30589">
        <property type="entry name" value="PTHR30589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01790">
        <property type="entry name" value="LGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13825" checksum="BE4D575946ADB612" modified="2018-04-25" version="1" fragment="single">MFFAIPFPPLSPEVFSFEILGREFALRWYALAYILGLLLGWRYVVALCARPALWGGAAPLPPEKAEPLLTWMVAGVILGGRLGYVLFYQPEHYLANPGAILAVWQGGMSFHGGFLGVVLGVIGFSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD3</accession>
    <name>A0A2M9PAD3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acyl_transf_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000942">
        <property type="protein sequence ID" value="PJN94496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="259"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="292"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="20"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="335" mass="37691" checksum="2D6CE18BB58DCC25" modified="2018-04-25" version="1" fragment="single">MGWTGISLMDLDRGSRGRLAWADIAKAISILLLVVYTTTVDSYYVNELLILARMPLFFFVSGLFAWRIVVSADLLTFMRDRVGNLVYLYAIWTWLLYLTTKGAASLFFGAPFYPKSNLWIFIDPPLTTWFLYALAIAFVVARLVRNLPIWLVMAVACAIYAVAVWTGDWRHQDFAERILRLFPFFWLGLAIRPLVGEVVETWHRWWPAICAAFLAMAWGVLDTPLSAFAPITFATTLVGIFGLLLLARNLSDKAWSRPIAIVGASTLYIYVLQRIQLYYLNQVREALGLVNPAWGLLEAVIIVIVGVLFGRWAAAQPGLGWLFQAPWVGGASRTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG8</accession>
    <name>A0A2M9PAG8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000934">
        <property type="protein sequence ID" value="PJN94511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="14362" checksum="8E5A5563EC43CC08" modified="2018-04-25" version="1">MPCSCAILRASASRRSSHSTPSASSGFAISYLSGLSGRPNRAALARIQSGRDWPSAGFVISVSGRRPRNFSAPMWPRTALSSASSGSSTIMPLAVSQSLCSLQRASSCHFGWGAAAAAAAAALGSAAAAAAASASVVMLPSSVC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH4</accession>
    <name>A0A2M9PAH4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2007 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000920">
        <property type="protein sequence ID" value="PJN94537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018551">
        <property type="entry name" value="DUF2007"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09413">
        <property type="entry name" value="DUF2007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2007" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7934" checksum="3DBEEDC16476AF3D" modified="2018-04-25" version="1">MKEILRSTDPTVIAFATALLRAEDIDCFVLDVHMSVLEGGIGLFPRRMAVADRDVFRARAILADNDVDGLTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK7</accession>
    <name>A0A2M9PAK7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000904">
        <property type="protein sequence ID" value="PJN94568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="7"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="264" mass="28275" checksum="84C4F2C4B49928E6" modified="2018-04-25" version="1" fragment="single">EEVGTGPVVLFLHGAVSDHRVWGGIRDRVAERHRFVAYDQRYFGPAEWPDEAAGFSVATHAEDLGAVIDALDAGPVHLVTWSYGGLVGLHAAMRHPEKFRSITHFEPTVSSLHAGLSGERAAIAQKFKSFGPMAEALQAGEEGDAVRRLIEAVFQLAPGEAEQHSDLAQQMWDDNARTLPPFLEAVAAVQPIGCEGLAGIEVPTLVMQGSDAYVLDAMMADEVVRCQPNATGLVLEGTNHGGPVQDRAAFIEAVLSFIESTDSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ1</accession>
    <name>A0A2M9PAZ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipid kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000816">
        <property type="protein sequence ID" value="PJN94710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005218">
        <property type="entry name" value="Diacylglycerol/lipid_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001206">
        <property type="entry name" value="Diacylglycerol_kinase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045540">
        <property type="entry name" value="YegS/DAGK_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00781">
        <property type="entry name" value="DAGK_cat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19279">
        <property type="entry name" value="YegS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00147">
        <property type="entry name" value="TIGR00147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50146">
        <property type="entry name" value="DAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DAGKc" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="230" mass="24968" checksum="2C254C7AF0651448" modified="2018-04-25" version="1" fragment="single">DGTLNRAAPAVLQTGLPMGILPMGTANDLARTLGIPDDLEAAADLIAKGGLRAIDIGLVNDHPFFNVASIGLSVDLARGLTPDLKRRWGRLGYAVSGLKVLAKARRFSAWITEGEDTIRTKTLQIAIGNGVHYGGGNVVEESAEIDDGHLDLYSLEMRNVWKLALGMRTFRSGTHGAWTDVRTLRGREFEIATRTPREVNADGELVTTTPARFRQIRRAIRVFALPEADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB35</accession>
    <name>A0A2M9PB35_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycine cleavage system protein H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000799">
        <property type="protein sequence ID" value="PJN94739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005960">
        <property type="term" value="C:glycine cleavage complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019464">
        <property type="term" value="P:glycine decarboxylation via glycine cleavage system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002930">
        <property type="entry name" value="GCV_H"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033753">
        <property type="entry name" value="GCV_H/Fam206"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11715">
        <property type="entry name" value="PTHR11715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01597">
        <property type="entry name" value="GCV_H"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6318" checksum="631D0EDD695CE5F0" modified="2018-04-25" version="1" fragment="single">APLDGQITEVNTVIVANPALVNEDPMEDGWFFKMTLADPSELDELMDEEAYREYIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB80</accession>
    <name>A0A2M9PB80_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-amino acid dehydrogenase</fullName>
            <ecNumber evidence="2">1.4.99.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.4.99.6" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000771">
        <property type="protein sequence ID" value="PJN94789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="5"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24800" checksum="5B0D80E893C7BAC6" modified="2018-04-25" version="1" fragment="single">MTASIAVIGAGVTGLTTAYELLDRGFEVTVFDRNRYAAMETSFANGGQLSASNAETWTQWGTVLKGLKWMLQADAPLLVNPRPTLHKMRWMAEFLGNIPNYKANTVETVRLAIAARAVLFEMAAREGIDFDLERRGILHFYDRAKDLEHARRVNLLLAEGGLTRREVSPREMREIEPALHGDFVGGFVTESDSSGDIHKFTIGLARACARRGADLRFGTEVDAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB7</accession>
    <name>A0A2M9PBB7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RES domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MbcT/ParT/Res family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000743">
        <property type="protein sequence ID" value="PJN94834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014914">
        <property type="entry name" value="RES_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08808">
        <property type="entry name" value="RES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RES" evidence="2">
        <location>
            <begin position="6"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12946" checksum="598329E4E847D6E6" modified="2018-04-25" version="1" fragment="single">SAGFGHRFDPLTICAYDVECEALVDLTTEDARAAAGVTYEQLAAPWMLDRSAGRIPASWRVQERLRAAGASGVLVPSFANGSLPGEVNLVLWVWGEAPPQAVRVIDAKNRLPKNRLSWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH7</accession>
    <name>A0A2M9PBH7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">30S ribosomal protein S10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpsJ</name>
        <name evidence="6" type="ORF">CNY89_11705</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Involved in the binding of tRNA to the ribosomes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uS10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000706">
        <property type="protein sequence ID" value="PJN94896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00508">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001848">
        <property type="entry name" value="Ribosomal_S10"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027486">
        <property type="entry name" value="Ribosomal_S10_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036838">
        <property type="entry name" value="Ribosomal_S10_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11700">
        <property type="entry name" value="PTHR11700"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00338">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00971">
        <property type="entry name" value="RIBOSOMALS10"/>
    </dbReference>
    <dbReference type="SMART" id="SM01403">
        <property type="entry name" value="Ribosomal_S10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54999">
        <property type="entry name" value="SSF54999"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01049">
        <property type="entry name" value="rpsJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_S10" evidence="5">
        <location>
            <begin position="7"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11546" checksum="5FCD5B89B257448C" modified="2018-04-25" version="1">MQGQTIRIRLKAFDYRVLDASTAEIVSTAKRTGARVRGPIPLPNRIEKFTVLRGPHIDKKSREQFEIRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI4</accession>
    <name>A0A2M9PBI4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplC</name>
        <name evidence="7" type="ORF">CNY89_11710</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.</text>
    </comment>
    <comment type="PTM">
        <text evidence="5">Methylated by PrmB.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000706">
        <property type="protein sequence ID" value="PJN94897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01325_B">
        <property type="entry name" value="Ribosomal_L3_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000597">
        <property type="entry name" value="Ribosomal_L3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019927">
        <property type="entry name" value="Ribosomal_L3_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11229">
        <property type="entry name" value="PTHR11229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00297">
        <property type="entry name" value="Ribosomal_L3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03625">
        <property type="entry name" value="L3_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0488">Methylation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="5">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019301"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22889" checksum="671D0EA042C5F864" modified="2018-04-25" version="1">MRSGVIAKKLGMTRLFLDDGRQVPVTVLQMENVQVVAQRTGERDGYTAVQLGAGAAKAKNVSQPMRGHFAKAQVEPKRKLAEFRVSPENLIEVGEEITADHYFAGQYVDIAGTSLGKGFAGAMKRHNFGGLRASHGVSVSHRSHGSIGQCQDPGKVFKGKKMAGHMGDVRVTTQNLQVVRTDADRGLIMVKGAVPGSKGGWVTIKDAVKKAAPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK5</accession>
    <name>A0A2M9PBK5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AMP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000692">
        <property type="protein sequence ID" value="PJN94926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="15"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="17630" checksum="2B3032E9ADE3619E" modified="2018-04-25" version="1" fragment="single">MTANLFDLLTRSSLDPDKVAIETASGARTTYAGLIAETGRVANVLRDLGVGPGDRVAAQVEKSVAAIVLYLATVRAGGVFLPLNTGYTPAEVEYFLGDAEPAVFVCFRNGYLWSSSPYTNRIISASSGFDGPSNRSVNPNDVRAYAARLQRTTHASAASPGRATEAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV0</accession>
    <name>A0A2M9PBV0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000658">
        <property type="protein sequence ID" value="PJN94994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="194"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="218"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="261"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="323"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="342" mass="34834" checksum="47E865FC2B8FD45A" modified="2018-04-25" version="1">MEELSVEAVQFEPGKITLDLRADGSAPVGLAQVQVDGAWRAFSLTPEGPISRLGTARVDIPYPWVEGETVHLLLLTSTGVTFDHTIDVAQATPTLAPATLAGLTMIGLLLGLAPVAIGLLAYPAMREAGPGALRFLLALTVGLLVFLMIDTLSEGLELGAEALGRLRGQTLVWVAMLLTAAVLLGLGRREGAPPTGAALATFIALGIGVHNFGEGLVVGTALVTGAAALAAFLVVGFVIHNVTEGLAIAVPLAANRPPLRVFLGLAALAGLPAVAGVWAGSQAVSPYWAALSFGVGAGAILQVVIELSAWLSRTSGGLPITRATTSGFALGLAIMYGTALFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV8</accession>
    <name>A0A2M9PBV8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000643">
        <property type="protein sequence ID" value="PJN95025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9869" checksum="6094ED5BC50D1190" modified="2018-04-25" version="1" fragment="single">DKVDAGTLANLYAAGYLPEIWTPDAATERLRRRVGDRGRGAVLPDRAGAGAGGRADGVRRLGPSPRLPWGTIGPKWRGRRRIAPRGGWSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY2</accession>
    <name>A0A2M9PBY2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EAL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000644">
        <property type="protein sequence ID" value="PJN95024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="1"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="178" mass="19485" checksum="98B7811AFEB59370" modified="2018-04-25" version="1">MERVTEPGLRLSINLSPRSMGDSDWLGVLTDGAERLGRRVTGRLILEITESEAIAASGQTQDFMDHVRGYGCAFALDDFGAGATGFRHFRDFRFDMVKLDGGFIEGVARSRDSQALVGCLMSAARHFEMMVVAERVESPADAAWLVEAGVDCLQGHLYGRPSVRPIRPEAPRRDARAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ9</accession>
    <name>A0A2M9PBZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000632">
        <property type="protein sequence ID" value="PJN95049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="195"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="27631" checksum="6BC3192A78423C1E" modified="2018-04-25" version="1">MTDFIATHFAFLTTPEGWAAMVALVAMEVVLGIDNLIFISILTNKLPAHQRAKARKLGISAALVMRLVLLAALAWIVGLTQPVFTAFGHGFSWRDLILIAGGLFLVWKATKEIHHTVDPQDHKDDIVGQTINVSMGGAILQILLLDLVFSVDSIITAVGMTEHLAIMYIAVIVAITVMLLASGPVAAFIEKNPTIVMLALGFLLMIGMTLIADGFGMHVPKGYIYAAMGFSALVEALNMLSRARRAKAEAAKAPAQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC42</accession>
    <name>A0A2M9PC42_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Chromosome partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_10390</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000597">
        <property type="protein sequence ID" value="PJN95116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041468">
        <property type="entry name" value="HTH_ParB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17762">
        <property type="entry name" value="HTH_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="4">
        <location>
            <begin position="33"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="287" mass="31536" checksum="5ABCB1C81F96AD5A" modified="2018-04-25" version="1">MEKKGLGRGLSALLADVSTEPARTSGPLPAGQRTVPIDRIRANPHQPRRSFDDRELQDLAASIRTKGVIQPLILRPHPVEDDIYEIVAGERRWRAAQLAGVHELPAVVRDLDDAEVLELAIIENVQRADLNAVEEAQGYRQLMDRFGHTQERLAEGLGKSRSHIANVLRLLTLPDVVLEHLRAGRLTAGHARALVTAANPEALAKQVIDRGLSVRQTEALAREAIKPGQPPRLKETKDADTRALEADLSANLRLPVAIDHKPGGKGELRIRYANLDELDGLCQLLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA1</accession>
    <name>A0A2M9PCA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000583">
        <property type="protein sequence ID" value="PJN95144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3'-5' exonuclease" evidence="2">
        <location>
            <begin position="1"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="204" mass="22380" checksum="9A9544BC65D661C2" modified="2018-04-25" version="1">MANHLHKGDLPEGLDLGPAVAIDCETMGLHPARDRLCLVQLSSGDGEAHLVQIAPGQTEAPRLAALLGDPAVLKLFHFGRFDIAVLKQAFGVLTAPVYCTKIASRLVRTYTDRHGLKDLLRETIEVDISKQQQSSDWGAPTLSQAQMDYAASDVLYLHRVRTVLDARLAREGRTELAQACFDFLPRRAELDLAGWADVDIFAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG8</accession>
    <name>A0A2M9PCG8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetolactate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000548">
        <property type="protein sequence ID" value="PJN95218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="2">
        <location>
            <begin position="4"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="19457" checksum="99B157DF893CA3B2" modified="2018-04-25" version="1" fragment="single">MPHMGDLVSEMLASSGVEVVFGMPGGQTTALHDGISRRTNRIRHVLMRDERNAAYAADAYARLTGKPGVCDVTVGPGANLLPAGLLEALNASIPMIAIVGEVPLDWLQLRDKGIASQGFDQLAFFKTCTKESWLVPSVSALPDILRTAFRVATAPRPGPVAVIIPHDIFDADWDGVTPAAVTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ2</accession>
    <name>A0A2M9PCJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pseudouridine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000523">
        <property type="protein sequence ID" value="PJN95267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140098">
        <property type="term" value="F:catalytic activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042092">
        <property type="entry name" value="PsdUridine_s_RsuA/RluB/E/F_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018496">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020094">
        <property type="entry name" value="TruA/RsuA/RluB/E/F_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01149">
        <property type="entry name" value="PSI_RSU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="2">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="22034" checksum="804F4714F60D4ADE" modified="2018-04-25" version="1">MTDEPERIAKRLARAGVASRRGAEEMIAEGRVAVNGKLIDSPAIKVTDRDRIAVDGRPVEAPEAARLWRYYKPIGLVTTESDEKGRPTVFANLPADLPRVLSVGRLDLNSEGLLLLTNDGGLKRRLELPSTGWIRKYRVRARGTPTDDVFGPVRKGITVDGERFAPMTVTIDRQQGANVWLTSSARCARGSRWTASGSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU7</accession>
    <name>A0A2M9PCU7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_09130</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000498">
        <property type="protein sequence ID" value="PJN95332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="154"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="187"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="20"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="23719" checksum="10207D4D4CBBE135" modified="2018-04-25" version="1">MYDFNFAPVLAAWDQLLLGAWLTIQLSGAAMALGLVVSVLGALAKTSGVRPLRWAVDVYVEVIRNTPFLVQIFFFYFGLPSLGVRLGPNEAALLALVVNFGAYGTEIIRAGIESIAKGQIEAGTALGLSKLQIFGYVIMKPALRTVYPSLTSQFIYLMLTSSVVSVISANDLAAAGNDLQSQTFASFEVYLAVTAIYLALAAGFSAVFGAIERVAFTYPLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD78</accession>
    <name>A0A2M9PD78_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000437">
        <property type="protein sequence ID" value="PJN95472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022646">
        <property type="entry name" value="SecD/SecF_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07549">
        <property type="entry name" value="Sec_GG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10811" checksum="CB49AAA876B4188C" modified="2018-04-25" version="1">MTFSILMTLGSLVLIFTRGFNLGVDFRGGALIILWMPVLGAVRRNPWLRAFYERLCAVGKPPKLALTAALRKLLHAVYSVAKNRRPFVIDPELTQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD87</accession>
    <name>A0A2M9PD87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000426">
        <property type="protein sequence ID" value="PJN95500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd13553">
        <property type="entry name" value="PBP2_NrtA_CpmA_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044527">
        <property type="entry name" value="NrtA/CpmA_ABC-bd_dom"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014702643" evidence="1">
        <location>
            <begin position="22"/>
            <end position="454"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="454" mass="48314" checksum="A5A4C22ED2941349" modified="2018-04-25" version="1">MLRHLLMGSALALISAGAAQAELLDLEKDELTLGFIKLTDMAPLAIAAEKGFFEDEGLYVTLEPQANWKVLLDRVISGELDGAHMLAGQPLAATIGYGTKAHIVTPFSMDLNGNAITVSNAVWEAMKPGVPTGPDGKPVHPISAAALKPVIEAAQAEGKAFSMGMVFPVSTHNYELRYWLAAGGIEPGYYSSDDTSGQIDADLLISVTPPPQMPATLEAGTISGYSVGEPWNQAAVFKGIGVPVVTDAQIFANNPEKVFGLTEAFVEANPNTTLALTKALIRAGAWLDADNGANRAEAVEILSRSEYVGADAEVIANSMTGTFEFEKGDKRPAADFNVFFAGNASYPFYSDAVWTLTQMRRWGQIPQTQTDAWYDETAKSVYKPAIYEQAARLLVEEGLAEEADFPFGSDGYKAPTAAFIDGVEYDGRAPNAYLSKLPIGLKDGQTVSGAGVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD7</accession>
    <name>A0A2M9PDD7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000395">
        <property type="protein sequence ID" value="PJN95567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="19319" checksum="716DB8B7DC7D729D" modified="2018-04-25" version="1" fragment="single">MDLRQLRYFTAVARERNFTRAAETLHIAQPPLSRQIQLLEEELGVTLIIRKSRPIKLTDAGRLFYEQALQVLGRVDQMKDATRRVGQNRNRVLSIGFVASTLYGGLPSLVRKLRQNAPELDIQLLEMLSIQQIPALKEGRIDLGFGRLKHNDPNVVSTVLREERLVAALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG4</accession>
    <name>A0A2M9PDG4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000398">
        <property type="protein sequence ID" value="PJN95563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014896448" evidence="1">
        <location>
            <begin position="20"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10090" checksum="52FC3ABBA77A85E0" modified="2018-04-25" version="1">MSRLLLAAPLLLLAGAAEAKIPFFNAVCPPENQIHADKGGPVYVNGAEAKLKKVNDNYYEAKTQHLTISIAVSPDGSPMVSYNHTSGHNGICTVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH8</accession>
    <name>A0A2M9PDH8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000381">
        <property type="protein sequence ID" value="PJN95600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="15850" checksum="39BE8ED0F64B911D" modified="2018-04-25" version="1">MGIVTVKSDLYRAEQTGGPVPDALKVKGVLRRATGKVFNAASDSAGSIYKLIKLRSDVILTERTLFHNAGWGFATTQVGVLGAAAALFTKTTSASTTESPITGIEAVSGQRLWEQLGLSADPRGEIELVAIAAANATGAGSMPFAVEWIDDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI8</accession>
    <name>A0A2M9PDI8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000375">
        <property type="protein sequence ID" value="PJN95617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="118"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="205"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="278"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="314"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="353" mass="39201" checksum="A3BB2FD7F1A81C3D" modified="2018-04-25" version="1">MQTTAIEVAPARLPSSLKGLGLIYGLAIASCFLVNMIVQSAPIGPWTGAQVGEMYWLDNVTWQLLALWWALLSVVSGGYPFHRIEDATTRGLVTLGAAWAMGWLSAKGIYWAGLDADWVFPIVGCIFFFIAFFSFAGENWIVAGMPPRRQFFLLLVMIAFLTYAVTHSTIRWIPAWWFPFIEMGSASGVLAYLTRRMTQPGKALAQIGILFLVVLGFLMLSTSLGFWDMAAPGVGSFWTLGYFSDPRWLLWFMVACSVSYALLIQLRNWPFTRIPMPWGGILACLFCAAVTTVVTAFLASLVGSVFTDMNEALTYAYMGTHWSFVIALLFGFGLDRPYLWAGQKTPGSWEDVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN0</accession>
    <name>A0A2M9PDN0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07300</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000366">
        <property type="protein sequence ID" value="PJN95636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041921">
        <property type="entry name" value="NuoE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="91"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="147"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="322"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="167"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="352" mass="37085" checksum="A7B2725C4C990471" modified="2018-04-25" version="1">MTRTASWSEPDAQAIIDRNLGREGPLLPILHDIQAAFGHVPREAIPVIAQALNLSRAEVYGVVTFYHDFKDAPHGRHVLKLEGRLVESVQGGLDVDPPRPEVEPAGVDDQPGRAAEVRDVVAAGGIAPDRAPAAPVAGIGAVVRDDEGAPDQAAQHQQVEPLALGHRQLGPDRRRDHGQRRRRDEGGLVLRGIARSSGGGPAAGGPGGRIDPVAQLRDHPVGRRHAAGPGPPGRLHRRLHVGEGRGHAHGLAVPGVEPAIGAALAGAVEGLLDRVAAKRDVHRIRQLDAGRRQRGLEFGEGVVAVVVAVVIPIGVLRIGQPDPQTAAPPTHLIPPHQRPPSQEVISHHFGSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP6</accession>
    <name>A0A2M9PDP6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Valine--tRNA ligase</fullName>
            <ecNumber evidence="1">6.1.1.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Valyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_07165</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.9" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000357">
        <property type="protein sequence ID" value="PJN95659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004832">
        <property type="term" value="F:valine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006438">
        <property type="term" value="P:valyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07962">
        <property type="entry name" value="Anticodon_Ia_Val"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033705">
        <property type="entry name" value="Anticodon_Ia_Val"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002303">
        <property type="entry name" value="Valyl-tRNA_ligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11946">
        <property type="entry name" value="PTHR11946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00986">
        <property type="entry name" value="TRNASYNTHVAL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="8">
        <location>
            <begin position="6"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="tRNA-synt_1" evidence="8">
        <location>
            <begin position="469"/>
            <end position="594"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="9">
        <location>
            <begin position="636"/>
            <end position="774"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="790"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00029936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="790" mass="87902" checksum="4E0A02DBFB733268" modified="2018-04-25" version="1" fragment="single">GTILGQSRRLGDSFDLGRNAFTMSGAPGAPSGEEGNFHDAVLKAFVTFYERGLIARGKRLVNWDPHFETAISDLEVENVEVPGHMWHFKYRLAGGETYEYVEKDADGNVTLSETRDYISIATTRPETMLGDGAVAVHPSDERYAPIVGKMVHLPLCDRLIPIVTDEYPDPDFGSGAVKITGAHDFNDYQVAQRNGLPMYRLMDLKGAMRADGAPYAEAVARAREIAAGAEATDAEIDTLNLVPEKYRGMDRFIARKAVVADIDAAGLAVMIPGPEGEPVPYVESKPITQPFGDRSKVVIEPMLTDQWFLDAGKLAIPAMAAVREGRTRILPEQHEKVYFHWMENIEPWCISRQLWWGHQIPVWYGPSIEALEALREIHVNWESWGEARQYNERFKFLTSKMTHSPHVPFCAASYSEAKSAAARYYAGVAEVSGDQHSDERAEAFRKELHHEGLGWSLLGSSITNRGEITIKLRQDPDVLDTWFSSGIWPIGTLGWPEDTPELRRYYPTSVLVTGFDILFFWVARMMMMQLELVGEVPFRDVYIHALVRDEKGKKMSKSLGNVLDPIELIDEYGADAVRFTLASMAAMGRDLKLSKDRIAGYRNFGTKLWNAARFAEMNGCAPVPGFDPTAVRLTANRWIVGETGRLREALDAALAAYRFNDAAGAVYAHVWGKVCDWYVELAKPLFQDEATAAETRATMAWALEQCLVLAHPFMPFVTEALWAERTGLLVHAPWPTYGAELVDPAADAEMGWVIALIEEIRSARAQMHVPAGAKIPLVALDLPPAQAEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR9</accession>
    <name>A0A2M9PDR9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Cytochrome c oxidase subunit 1</fullName>
            <ecNumber evidence="8">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">ctaD</name>
        <name evidence="10" type="ORF">CNY89_07045</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 8">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000348">
        <property type="protein sequence ID" value="PJN95679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045277">
        <property type="term" value="C:respiratory chain complex IV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015990">
        <property type="term" value="P:electron transport coupled proton transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01663">
        <property type="entry name" value="Cyt_c_Oxidase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033944">
        <property type="entry name" value="Cyt_c_oxase_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014241">
        <property type="entry name" value="Cyt_c_oxidase_su1_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01165">
        <property type="entry name" value="CYCOXIDASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02891">
        <property type="entry name" value="CtaD_CoxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0186">Copper</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7" id="KW-0349">Heme</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="75"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="170"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="208"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="255"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="291"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="327"/>
            <end position="350"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="362"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="401"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="433"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="474"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="9">
        <location>
            <begin position="22"/>
            <end position="540"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="549" mass="61314" checksum="EBBC934159640EF2" modified="2018-04-25" version="1">MADAAHAHHAGHDHRPGFFTRWFMSTNHKDIGILYLVTAAALGLISVMMTMYMRLELMHPGVQHMLIDGVPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFLPLMIGAPDMAFPRMNNLSYWLYVAGALLAVVSLFAPGGSGQTGSGVGWVLYPPLSTTESGMSMDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTLHKVPLFVWSVIVTAFLILLALPVLAGAITMLLTDRNFGTTFFAPEGGGDPVLYQHLLWFFGHPEVYIIVLPGFGIISHVISTFSRKPIFGYLPMVYAMIAIGVLGFVVWAHHMYTVGLSTTQQAYFMLATMVIAVPTGIKIFSWIATMWGGSVEFKTPMLFALGFLFLFTVGGVTGVVLSQAALDRTYHDTYYVVAHFHYVMSLGAVFSIFAGVYYWFAKMTGKDYPEWAGKVHFWMMFVGANITFFPQHFLGRQGMPRRYIDYPEQFALWNYVSSLGAFLSGLSFLFFFGIMFYSLRYGKRETNPMYWGPQPDPTLEWTLSNPPPEHTFETLPTRDMWDHSRSHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU9</accession>
    <name>A0A2M9PDU9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type IV secretion system protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000337">
        <property type="protein sequence ID" value="PJN95709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007792">
        <property type="entry name" value="T4SS_VirB3/TrbD/AvhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05101">
        <property type="entry name" value="VirB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8380" checksum="E07BDB82E75CAC6F" modified="2018-04-25" version="1">MMGLPLTYVVILAMTTMGGFIATLSFVYFAASAIIGYAALRALAAWDPRIFDVILTSLRRTPLPAAWLRGKGVVYRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW1</accession>
    <name>A0A2M9PDW1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06715</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000324">
        <property type="protein sequence ID" value="PJN95740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd18808">
        <property type="entry name" value="SF1_C_Upf1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045055">
        <property type="entry name" value="DNA2/NAM7-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041679">
        <property type="entry name" value="DNA2/NAM7-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041677">
        <property type="entry name" value="DNA2/NAM7_AAA_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10887">
        <property type="entry name" value="PTHR10887"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13086">
        <property type="entry name" value="AAA_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13087">
        <property type="entry name" value="AAA_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_11" evidence="2">
        <location>
            <begin position="132"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_12" evidence="3">
        <location>
            <begin position="194"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="555"/>
            <end position="580"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="555"/>
            <end position="572"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13087"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="580" mass="63361" checksum="D6284743EA04395B" modified="2018-04-25" version="1" fragment="single">ETGAVGPDEAPEAFRTAYARWVAPILVDLRPELRRFSTVTHEALIADFRTLDADLARLASETIRARLSGSAPAKHAVGESDPRYGVLARELRRKQGMPVRQLVSEMGSALTALTPCLLMSPLSVAQFLPADAEPFDLVVFDEASQITVPDAIGAIARGKRCIVVGDPKQMPPTRFFEREAGDGDEEGGMADLESILDEAMAARLPHHRLTGHYRSRHESLLCFSNHAYYGGQLVTYPAADTRDTVVFFRRVEGVYARGKARTNPIEAQAVVAEVVRRLRDPVLSRLSLGVVTFNAEQQRLIEDLLDAERRADPGLERHFDGAAGDAVFVKNLETVQGDQRDVILISVGYGPTEPGAQTMPMNFGPLNKQGGERRLNVAITRATTEVGVFASFDPGMIDLTRSQAAAVRDLKTYLDFAARGTVALGEAVRRAGTQDYANDFEQAIAEMLRARGWTVRTQIGVSKFSIDLGVVHPDAPGRFLAGVECDGATYHSSPSARDRDRVRHLVLENLGWRLFRVWSTDFFNDPEGAMTALDGKLSALLEKDRAEAEALLAEAEPEEVAGEVEAEEEAADEVVVEGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB1</accession>
    <name>A0A2M9PEB1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">CN hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_05885</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CN hydrolase family. Apolipoprotein N-acyltransferase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000273">
        <property type="protein sequence ID" value="PJN95881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016410">
        <property type="term" value="F:N-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042158">
        <property type="term" value="P:lipoprotein biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07571">
        <property type="entry name" value="ALP_N-acyl_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004563">
        <property type="entry name" value="Apolipo_AcylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="CN hydrolase" evidence="10">
        <location>
            <begin position="1"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="137"/>
            <end position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="22960" checksum="6F5EF512ABD90CFB" modified="2018-04-25" version="1">MAARGAPVILGIERIDAGEDGDRWFNSLAVLGPDSLPLAIYDKHRLVPFGEYVPLGGLLARLGPQVATLTTRGFTPGPGPTRISVPGVPPFLPLICYEAVFPQAMWPPEGRSDWLVQVTNDAWFGELSGPYQHLAQARPRDRAGPAAGAIGQYRNFGDDRPARADHGAVAAGRSGPYRRGAARCSRYDSLFALRQSAAYPHNVVGARINCLQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF2</accession>
    <name>A0A2M9PEF2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipoate--protein ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000253">
        <property type="protein sequence ID" value="PJN95931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="1">
        <location>
            <begin position="32"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22989" checksum="AFAD897523FA3375" modified="2018-04-25" version="1" fragment="single">MPQPFRLIDGGVSDGRRQASHDAALVELHAAGRVPDTLRFMRCSPSVILGRHQALGGEIDLDLCRAEGVGVVRRLTGGGTIYVDERQLGWEIVFGRDRMPGPIDTVARTLCGAVTSGLVDAFGIDASYRARHDIAVDGRRLGASVGHFQGDTIVYQGVLWVDLDPNRILPFLTLPSVRLSDFGCCAAADRMTSLRALLGEAPSIEAVRGAVLSGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF7</accession>
    <name>A0A2M9PEF7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3 13">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="primary">lpdA</name>
        <name evidence="17" type="ORF">CNY89_05590</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-lipoyl-L-lysyl-[protein] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11 13">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="11 13">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="13">The active site is a redox-active disulfide bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3 13"/>
    <dbReference type="EMBL" id="PHNO01000254">
        <property type="protein sequence ID" value="PJN95929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5 11 13" id="KW-0274">FAD</keyword>
    <keyword evidence="4 13" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 11 13" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9 13" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="16">
        <location>
            <begin position="37"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="15">
        <location>
            <begin position="371"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="469"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="206"/>
            <end position="213"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="296"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="337"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="343"/>
            <end position="346"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="12">
        <location>
            <begin position="70"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN95929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="497" mass="52231" checksum="2D7A7807A366C53F" modified="2018-04-25" version="1">MGKIDPPRVLEPDHHQALVGGGDPARDEGVGGVDHRLGSGPGGYTAAFRAADLGLKVVLIERNPTLGGVCLNVGCIPSKALLHAAKVISEAEEMSHFGVKYAKPEVDVDALRDWKSSVVNKLTGGLTGLAKGRKVQVVEGLGTFTGPNAIRVEGKDGVKTVSFDQCVIAAGSEPVKLPFIPDDPRVIDSTGALELQGVPERLLVIGGGIIGLEMATVYEALGAKVTIVEFMDQIIPGADADIVKPLFKRIEKKYEKIHLKSKVTAVASTEAGLKVSMEGPNGAFEDTFDRVLVSVGRRPNGKLVGAEAAGVTVDERGFIPVDSQMRTNVRHIFAIGDVVGQPMLAHKAVHEAKVAAEVAAGSNRVFDARVIPSVAYTDPEVAWVGMTENEAKAKGVKVGKGVFPWAASGRSLSLGRDEGVTKVLFDLEDDRVIGAGIVGPSAGDLIAEVALAIEMGADATDLGQTIHPHPTLSETVNFAAEMFEGTITDLIPPKKKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN4</accession>
    <name>A0A2M9PEN4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">PLDc_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05205</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000234">
        <property type="protein sequence ID" value="PJN95988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027379">
        <property type="entry name" value="CLS_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13396">
        <property type="entry name" value="PLDc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="PLDc_N" evidence="7">
        <location>
            <begin position="15"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6571" checksum="3C402704F9814BEB" modified="2018-04-25" version="1">MRTEFVGIGGFILLALVIWAIVSVVGSNASTGGKVIWILALLFLPLLGFIAWLLFGPRSVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ5</accession>
    <name>A0A2M9PEQ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000244">
        <property type="protein sequence ID" value="PJN95964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4657" checksum="DC99DDA01F9AA939" modified="2018-04-25" version="1" fragment="single">RGGGGGAVSVTMHISTPDVAGFQRSQSQIAAEMNRAMKRGRRNL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES1</accession>
    <name>A0A2M9PES1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-hydroxy-3-oxopropionate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000209">
        <property type="protein sequence ID" value="PJN96060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3499" checksum="9EC23BA5E7308312" modified="2018-04-25" version="1" fragment="single">VDALFAALVAHGGGDLDHAAALVELRRRNGVEQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY0</accession>
    <name>A0A2M9PEY0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH_8 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04535</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000195">
        <property type="protein sequence ID" value="PJN96105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_8" evidence="2">
        <location>
            <begin position="10"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4415" checksum="3A94D745A6C10F17" modified="2018-04-25" version="1" fragment="single">LPGRGDRHHRQSGGNVSAAATRLGVSRATLHRKLKRLDLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ4</accession>
    <name>A0A2M9PEZ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000198">
        <property type="protein sequence ID" value="PJN96096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="23840" checksum="17A9A666BACDC2B5" modified="2018-04-25" version="1">MPTVLVTSANRGIGREFVRQYAQAGWRVIAACRSPELEADALRAMGNVRPIGMDVTDLVSVEAAARESVDPLHLLINSAGVIGQTGDGPGEVDYGEWSRVLDVNLMGPVRVLDSFAGRLEASGSAKAVAITSGMGSLADVQSPMAMMYRTSKAGLNMAMRVRALQLKPRGVTVAVINPGWVRTDMGGPGAKTSVEDSVAGMRAAIEALSADRAGSFLNWQGQDLPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF27</accession>
    <name>A0A2M9PF27_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000185">
        <property type="protein sequence ID" value="PJN96139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="17533" checksum="DD18183966C5D5E4" modified="2018-04-25" version="1" fragment="single">EAGAKGLEFFAEMNKAGNFVPVIGKSGTLAQGATPVVIWWDYNALSGRDALAGNPPMDVVIPASGVVAGVYVQAISAFAPHPNAAKLWMEHLYSDEGQLGWLKGYCHPIRFQDLATRGVIPQDLLDALPPPEAYEAAVFPTIEEQAAMKTVVTGGWDKVVGANVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF2</accession>
    <name>A0A2M9PFF2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">HisKA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03530</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000145">
        <property type="protein sequence ID" value="PJN96276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="179"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="HisKA" evidence="3">
        <location>
            <begin position="225"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="340"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="364" mass="40475" checksum="5AB9398A392DE577" modified="2018-04-25" version="1">MNLTGGRPQRALGIGLMLVMAAVAVIGYSSIRRDVQNLKDISQDNILWTASQMEVELLRFKLSLARLALENTQEALDEARERFDILWSRVFLMGAGHVGDLIANYDQGHGSIPAFQQYLREIDPVFATLRPDDIPAMRTLLRELDAFQDDLRLYTLRVVRGDTAAAAQVRDRIQLSSQLTTAVSLAAMLLSALGLLLLLNDNRRQRQLARLNQRIAEEAELSSRAKSRFLTMMSHELRNPLNGVLGPLALLGQSDLPPRHQRLVEQAQISGRSIVQMLAGLLDYGEMQDGRFRLRDEPLRLKRAGQGDQPIGALTRASDTFTQVRKTRCPFLSRCAADRPPCWRPSSPAAPASKAATPTRSATC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG9</accession>
    <name>A0A2M9PFG9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000139">
        <property type="protein sequence ID" value="PJN96293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="11"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="311" mass="35307" checksum="610847A4D71A3148" modified="2018-04-25" version="1">MRPRENPLSGHLLRALTTLLEEASVTRAAQRLNLSQPATSLILKQLREIFGDPLLVRGQGGMVLTERAEMLRRSAGQALDELDALLVRPDDFDPSENRQTFTIAMPDHILPLMLNGVMREFRRRAPLARLAIRALGPEYDFEGALASGAADLVISNWPTPPPHLRISTLFEDHFVCLVDAGHAFTRRPPTREDYLAADHVAPSDYAIQHRGVVETHLSGLRLTRERRVVISYFSMAPYLLPGTDLIFTVTRHYAEHFAEILPLAIIDSPIDYPVVQFYQLWHERMQHSPTHRWLRTLVGEMRRSRSAPHSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM3</accession>
    <name>A0A2M9PFM3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000124">
        <property type="protein sequence ID" value="PJN96345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010607">
        <property type="entry name" value="DUF1194"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036465">
        <property type="entry name" value="vWFA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06707">
        <property type="entry name" value="DUF1194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53300">
        <property type="entry name" value="SSF53300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014773803" evidence="2">
        <location>
            <begin position="29"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="217"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="355"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="228"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="356"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="387"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="401" mass="42781" checksum="C81923A760C05E62" modified="2018-04-25" version="1">MQEDDMTFASLKALGALLVLGLAPQASANSGTRVDAAIVLAIDVSGSMDVEELAVQRAGYLEALRHPDLIRIVENGRHKRIAISLFEWAGEVRDDSSVSWRVIDGPAAIEAFAREVEAAPIETSFGTSISRAIHHAMDMIETADFQADAWLIDVSGDGPNNIGPPVAEARDRALDRGVTINGLPIMIRPSRGAPDLGAYYEDCVIGGLGAFVLPAASRAGDRPGDPPQAVPRTDRRDQPADPGPRGRGEDLARLGRGADRLPRRRAPAHGSDRRLGRGRVGGSTRPTQRRRGGSRHRPAVGWVIHPPYLSPATSPSSIASSVSIRSASRGGLSHRSRLIRGKRIATPDLCRVERFSPSKATSSTSPWSGSARTARTGPKRSVVLLRTKRSISASSASVKPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG89</accession>
    <name>A0A2M9PG89_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000068">
        <property type="protein sequence ID" value="PJN96549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7100" checksum="31C13D8370317EEE" modified="2018-04-25" version="1">MTALVVLGVALTAAGIGGLAYCILEGLRVKREKPAPDVVRARLQKLVAINLGSVALAACGLMAVVLGVML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE2</accession>
    <name>A0A2M9PGE2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nitrate reductase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">narZ</name>
        <name evidence="5" type="ORF">CNY89_01455</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000051">
        <property type="protein sequence ID" value="PJN96623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006655">
        <property type="entry name" value="Mopterin_OxRdtase_prok_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028189">
        <property type="entry name" value="Nitr_red_alph_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044906">
        <property type="entry name" value="Nitr_red_alph_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14710">
        <property type="entry name" value="Nitr_red_alph_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00490">
        <property type="entry name" value="MOLYBDOPTERIN_PROK_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1 3" id="KW-0408">Iron</keyword>
    <keyword evidence="2 3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="4">
        <location>
            <begin position="44"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="55"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1035"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="1035" mass="115409" checksum="7A7CE535B0AD1D62" modified="2018-04-25" version="1" fragment="single">MSHLLDRLNFLQKKAVGTFANGHGETTRESRDWEEVYRNRWRHDKIVRSTHGVNCTGSCSWKIYVKSGIVTWETQQTDYPRTRPDLPNHEPRGCARGASYSWYLYSANRVKTPLIRSRLLKIWREKRKTLAPVAAWAAIQADPILRAEYTRVRGKGGFVRAGWDEATEIVAAANAHTAKTYGPDRIFGFSPIPAMSMVSYAAGSRYLSLLGGICMSFYDWYCDLPPASPQTWGEQTDVPESADWYNSGFLILWGSNVPQTRTPDAHFYTEARYRGAKSAVICPDYSEAAKFGDIWLSPKAGTDSALAMAMGHVILREFHLDRQAEYFEDYCRRYTDMPLLVRLEEQDGRLVPGRMLRAADFADGMGEDDNPDWKTVGIDEASGRIVVPNGSIGFRWEGEGSKELKKGAGAAEAGMTTERKMRTGCWNLEQVAAEGEEISLRMSLILDSDRDDVAPVDFPYFGGQATEHFTRCEHPGVLTRSVPVKRLALKDGEALVATVFDLFCANYGLDRGLGGDWVTSDYDADVPYTPAWAEKITGVNRNAIITVAREFALNAEKTKGKSMVILGAGLNHWYHMDMNYRGIINMLVMCGCIGQSGGGWSHYVGQEKLRPQTGWTALAFALDWNRPPRHMNSTSAWYAHTDQWRYETLTAQEILSPTAPAGDWDASLIDFNIRAERMGWLPSAPQLKQNPLEVGQAAKAAGMEAKDYVAAGLKSGEIEMSCEDPDAPENWPRNLFVWRSNLLGSSGKGHEYFLKHLLGAQHGVLGKDLGEEGRVRSKDARWHDAAPEGKLDLLVTLDFRMSTTCVYSDIVLPTASWYEKDDLNTSDMHPFIHPLTAAVDPAYESRSDWEIFKTIARKFSEVAPEVLGVETDVVAVPILHDTAAEMAQGDVRDWKRGECDLIPGRTAQNYVAVERDYPNLYKRFTALGPLMEKLGNGGKGISWDTKVEVHHLRDLNDPVTEPGPTLGMPRIETAIDAAEVILMLAPETNGHVAVKAWEALGKATGRDHTHLAAGKQHEEIRFRDVASQPRKIISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM9</accession>
    <name>A0A2M9PGM9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00940</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000032">
        <property type="protein sequence ID" value="PJN96709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040582">
        <property type="entry name" value="OB_MalK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17912">
        <property type="entry name" value="OB_MalK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="4"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="362" mass="39041" checksum="D99244F3BF433550" modified="2018-04-25" version="1">MASLLLKNVAKSYGPVDVLRNINLDIKTGELIVFVGPSGCGKSTLLRMIAGLERITGGDFLIDGVRMNEVPPAQRGIAMVFQSYALYPHMTVRDNMSFGMKIAKKPAAEVSAAVENAAKMLQLTPYLDRLPKALSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRIEIAQLKERMPNSTMVYVTHDQVEAMTLATRIVVLSGGNVEQVGAPLDLYERPANVFVARFIGSPSMNILPGKVVETGENAVVEIQGGGRVHVAVPLPGSELGKDVQLGVRPEDLVPTDGETLFVGAISMVEALGENTLLYFDPQHGNEPIVAKLPGIQRFSRGDSVRLGADIAKLHLFNAQGRSFLHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP2</accession>
    <name>A0A2M9PGP2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">23S rRNA (Pseudouridine(1915)-N(3))-methyltransferase RlmH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01000</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003742">
        <property type="entry name" value="RlmH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02590">
        <property type="entry name" value="SPOUT_MTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="5974" checksum="5C379432857987BC" modified="2018-04-25" version="1" fragment="single">ALLIGGADGLDPRLRGPEAISFGRMVWPHMLVRAMLAEQLYRAATILSGGPYHRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="21" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR8</accession>
    <name>A0A2M9PGR8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Bifunctional protein FolD</fullName>
        </recommendedName>
        <domain>
            <recommendedName>
                <fullName evidence="10">Methylenetetrahydrofolate dehydrogenase</fullName>
                <ecNumber evidence="10">1.5.1.5</ecNumber>
            </recommendedName>
        </domain>
        <domain>
            <recommendedName>
                <fullName evidence="10">Methenyltetrahydrofolate cyclohydrolase</fullName>
                <ecNumber evidence="10">3.5.4.9</ecNumber>
            </recommendedName>
        </domain>
    </protein>
    <gene>
        <name evidence="10" type="primary">folD</name>
        <name evidence="13" type="ORF">CNY89_00730</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADP(+) = 5,10-methenyltetrahydrofolate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22812"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.5"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>5,10-methenyltetrahydrofolate + H2O = (6S)-10-formyltetrahydrofolate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="ChEBI" id="CHEBI:57455"/>
            <dbReference type="EC" id="3.5.4.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.5" evidence="10"/>
    <dbReference type="EC" id="3.5.4.9" evidence="10"/>
    <dbReference type="EMBL" id="PHNO01000022">
        <property type="protein sequence ID" value="PJN96749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004477">
        <property type="term" value="F:methenyltetrahydrofolate cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004488">
        <property type="term" value="F:methylenetetrahydrofolate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009086">
        <property type="term" value="P:methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01080">
        <property type="entry name" value="NAD_bind_m-THF_DH_Cyclohyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01576">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000672">
        <property type="entry name" value="THF_DH/CycHdrlase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020630">
        <property type="entry name" value="THF_DH/CycHdrlase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020867">
        <property type="entry name" value="THF_DH/CycHdrlase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020631">
        <property type="entry name" value="THF_DH/CycHdrlase_NAD-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00763">
        <property type="entry name" value="THF_DHG_CYH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02882">
        <property type="entry name" value="THF_DHG_CYH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00085">
        <property type="entry name" value="THFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00766">
        <property type="entry name" value="THF_DHG_CYH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00767">
        <property type="entry name" value="THF_DHG_CYH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 10" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="4 10 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 10" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="5 10" id="KW-0521">NADP</keyword>
    <keyword evidence="1 10" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="THF_DHG_CYH" evidence="11">
        <location>
            <begin position="6"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="THF_DHG_CYH_C" evidence="12">
        <location>
            <begin position="124"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="166"/>
            <end position="168"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="30503" checksum="DA7067756D727A2F" modified="2018-04-25" version="1">MGAKIIDGKAYAASLGERIAACVPTLSKQTGHPPGLAVVLVGNDPASGIYVRSKGKMARKVGMASFEHVLPEDATQTELLKLIELLNADETVDGILVQLPLPGHLDSLAVISAIDPAKDVDGLHPHNAGLLASGLPGLVSCTPLGCLMLLKSVLGSLAGLDAIVVGRSILVGKPMAQLLLAENCTVTVAHSRTRDLAAKVGMADIVVAAVGQAEMIKGEWIKPGATVIDVGMSRINRDDKTMLVGDVDFAAASRKASAITPVPGGVGPMTIMSLIHNTLVAAHRRRNLPVPELW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU5</accession>
    <name>A0A2M9PGU5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00690</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 5 (cellulase A) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000021">
        <property type="protein sequence ID" value="PJN96751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001547">
        <property type="entry name" value="Glyco_hydro_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00150">
        <property type="entry name" value="Cellulase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cellulase" evidence="3">
        <location>
            <begin position="55"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="409" mass="45832" checksum="1639349B75CA6C07" modified="2018-04-25" version="1">MTDLLPATARLAARVWTLFGLVLLCATLCLRPAAAMDAIAFWDTPRAGANSFNAKPPDRAYFDALAATGATWVRLAFSKWPSKGKDFLVGDADRYSGLRQDDLATLRRTLDAAHAAGLKVVIAPLTLPGARYTQLNDGVFDDRLWSDWSYQKAAIDFWRELAAALWNHPAIVAYNILNEPAPEKTTGLVENGRTEDMEAWQARRAGTTRDLPAFYDRVIAAIREVDWATPIMLDGGFYANPRALATWPWRPADERLLYAFHMYEPWDATSHVNLKRARPLRYPGAVTEYKKRNMAWNRAAVAAHIGTAFDWAAAQGLPPTRVVAAEFGCMRRWADCGTYLSDVLDVIEARGGHWAFYAFREDDWDGMDYELPASLKPGRFYAAMNRGQGDLLPRNGQLMKLIRSRMPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV9</accession>
    <name>A0A2M9PGV9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000031">
        <property type="protein sequence ID" value="PJN96714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009216">
        <property type="entry name" value="Virulence_factor_SrfB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07520">
        <property type="entry name" value="SrfB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="640"/>
            <end position="678"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="640"/>
            <end position="662"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="678" mass="75033" checksum="95F0F8E72B64486B" modified="2018-04-25" version="1">MALPWVAGWLRDQYAAGLSRQRGRRIAPGDFANPGEHWAAYMVLLDVIAATCPMPSIELADLFSPYSRREPVGVSLVLDIGNSRMCGVLVEDAPTTAYADVSQTYRLELRDLSRVEHVYSEPFESRIEFAAADFGPLRHASGSNRNKREAFWWPSPVRVGPEAARLASLTDGTEGASGLSSPKRYLWDAEARVQPWINNNGTLPEGAEPQEIRGPMISRLTEDGTVTLRKPGALPGLMRRYSRSSLYTLMLGELLIQASTQINSVDVRKNRLNSASPRVLRQIILTLPTATPLAEQKIMRDRIEAAVDLVWEVMGWNDPASTFQKPKIQLDWDEATCTHLVWLFNEIQHKFHGAPQEFFDLVADRRRPGEASSLRVASIDMGGGTTDLMIMRHDILAGTQTVIEPTQVFREGFRLAGDDILKELVEACLLPQIAQGMAAGSVPRPAAILSDLFGGDREAMSQRERTLRGQLVAQIFARAAVGLLGRYERAETGETALRDLLSDMEVLSGPAVAYFEETVRRSSGVAYDLLATPIRLDVDQVERLIEGLVGPMMRDLCDLVRAYDCDVLLVSGRPSQYAVIRRLILSSMPVTANRIVPMGSYRVGNWYPFRSSNFRIFDPKTTAVVGARARRPRRSAAGCCRVRRGRGPGRTARGRRTPARGTRRRAASAGRGRPAAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW1</accession>
    <name>A0A2M9PGW1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="8229" checksum="B7138CC57FDACAE5" modified="2018-04-25" version="1">MALFDGAERRMNRAHDERMELAWTAERLARLQKLPPFKSLLSRKRRKAARRDPKQEFDAWAAWAAAYSPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH14</accession>
    <name>A0A2M9PH14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000008">
        <property type="protein sequence ID" value="PJN96823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="256" mass="26373" checksum="816CC42FD8675DFD" modified="2018-04-25" version="1" fragment="single">PYLESSQVYERTGMLFASYRGNLPTIECVIDMENRGGTAFYVVYGGEGYVLTDCGIVNAGYHGMACRSGRIHAHDTQWQGAKGSPARIAFLGLIDFQSADLSNGCQSAEVPTQGLIDCSRFGLAYARYCVANGTGAAIINARRGSKVNFEELVANGPNAYGALFTQSAGDSGYGCTIRAVANGAALSAATGAKVNVSYADIRGGGALDLEVLNGGTIVANGVRTTGSGSSAPYTPALSATNVAAFNVTDANGTIFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH58</accession>
    <name>A0A2M9PH58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_00365</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="3">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000010">
        <property type="protein sequence ID" value="PJN96814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024607">
        <property type="entry name" value="Sulfatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00523">
        <property type="entry name" value="SULFATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014889919" evidence="4">
        <location>
            <begin position="36"/>
            <end position="791"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="5">
        <location>
            <begin position="77"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="3">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="791" mass="86760" checksum="D2AA8F1422D5ED30" modified="2018-04-25" version="1">MARHIRPQHAAGRWARLGGAAVAAFLALGAAQALAQDWPDRTELPDTLSPFEGNIGKYYTDSTSDWQEPVAAPEGAPNVIVILLDDVGFGQTGTFGGTIPTPALDELAAEGLEYTRFHTTAICGPTRAALLTGRNHHVAGNGFLMEWATGFPNYSTMIPKSTATIGEILKDNGYATWWFGKNHNTPDWETTVAGPFDRWPTGLGFEYFYGFNAGETDQYYPVLFENTVPVEPDKTPEQGYHLLTDMTDRAIERMKFSKSVAPEKPFFMYFAPGAMHAPHQARPEWREPFKGAFDSGWDVYREQIYENQLARGLIPEGTKLTPRPDWVPAWDTLNDTQKKVYTTLMENYAGYMSFTDHEVGRLLAAVKELPDAENTMVIYIVGDNGASSEGGPNGTFNEIAALNGIETPLEDLVPLLDNVGQPGTEPHYPMGWAWAGNAPFQWVKQVASHLGGTRNPMVVSWPARIQHDDAPRLPFLHVIDVVPTILEAAGIPMPETVDGIAQKPLEGASFLESFSDPAFEGRDSQYFEILSNRSFYEDGWKANAQHTLPWRQDLAPGNWEEDRWELYYLPDDFSEAVDLAADNPEKLEELKAKFDAAAEEFDVYPLDDRGSGRLAVPKPPAPGADPESKTFTFYSGATRIPENAAPLMKNTSWTLAAKVEGNGADAEGVIMGFGGLAAGMSLYLDKGVPVFIYNYFDDYTTLRGSEPIDGEAEILVDFAYDGGEKPGAGATVTLSVDGTQVAQEKMAATVPGRFGADTFGIGEDFGQPVTTNYEVPFAFTGTIEKVVIDIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D5</accession>
    <name>A0A2M9P4D5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004654">
        <property type="protein sequence ID" value="PJN92402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7417" checksum="35B0996948E0F050" modified="2018-04-25" version="1" fragment="single">AGMTLAEALSKLDAPAPASSANFFAGFDDWMEAEAVATRAGMTLAEALSKLDAPAPASSANFFAGFDDWMEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I0</accession>
    <name>A0A2M9P4I0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004463">
        <property type="protein sequence ID" value="PJN92461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010290">
        <property type="entry name" value="TM_effector"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05977">
        <property type="entry name" value="MFS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8738" checksum="C4C55D70CFFF5041" modified="2018-04-25" version="1" fragment="single">PLDRFREPKLGLDLAPRSGPVAITVEYRIRETDPLPDRGELDLSPLDRFREPKLGLDLAPRSGPVAITVEYRIRETD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N1</accession>
    <name>A0A2M9P4N1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004391">
        <property type="protein sequence ID" value="PJN92479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="7598" checksum="B3F7C07B3F73DF59" modified="2018-04-25" version="1" fragment="single">MQGLVFVVWLATAHGIWSASLGPEAPASLGPSCASADDAAGLALAAMQGLVFVVWLATAHGIWSASLGPEAPASLGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S0</accession>
    <name>A0A2M9P4S0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004252">
        <property type="protein sequence ID" value="PJN92520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9620" checksum="4CD886E003496C4B" modified="2018-04-25" version="1" fragment="single">HVVITNVQQLATDLDKWLNQFSDNFFDMIIIDEAHHSAAASWQRVIERFNQAKVILLTATPFRSDRQELDGELVFRYPFRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P581</accession>
    <name>A0A2M9P581_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003694">
        <property type="protein sequence ID" value="PJN92714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="13"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="61"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10551" checksum="5807089FECBD4951" modified="2018-04-25" version="1" fragment="single">QSHLALQRGELQRLAEAQHDRDEEQPPDRRDRRQLRSSGAATCPTACQTISPPIMPSRLRACRNSPTSPCSAVSCSVWPRPSTTETKSSHQTDGIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B7</accession>
    <name>A0A2M9P5B7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003695">
        <property type="protein sequence ID" value="PJN92713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10709" checksum="DA82C7C3508FA59A" modified="2018-04-25" version="1" fragment="single">VPGHIRSDNGPEFIAKAVREWIAAVGARTAFIEPGSPWENGYCESFNAKLRDELLNGELFYSLAEGRTVLESWRRHYNTLRPHASLGYKPPAPAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J2</accession>
    <name>A0A2M9P5J2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003370">
        <property type="protein sequence ID" value="PJN92821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11550" checksum="997B1AACB39F8684" modified="2018-04-25" version="1" fragment="single">PLSQITTSPKVRWMSMPMTRRIRASLIAMTTGAAGRHDTYGSARAAQPGESQRRPATNASSKLMMYIGLPAPSCSRSLCPGCSQHTPTAKIDQRPKHGAPVTSYRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R2</accession>
    <name>A0A2M9P5R2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peripla_BP_6 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25730</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003198">
        <property type="protein sequence ID" value="PJN92877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="12"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="78"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="94"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12820" checksum="9302D55CEB8FF53F" modified="2018-04-25" version="1" fragment="single">WRGTTAPAPPEEAEALSEVAEEAGVLFLNAGATADRLRQDCREMTFHVEPSAAMYLDALLGWFVRAGFRRWHFVHDDSPESVARHDRARAARGGRGALRGRRGSRRALSQRRRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T1</accession>
    <name>A0A2M9P5T1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003109">
        <property type="protein sequence ID" value="PJN92914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10856" checksum="8323B8FAD4C1322D" modified="2018-04-25" version="1" fragment="single">AHRGRPGAIVSDNGTEFTSSAVLAFTQAAGLDWRYIAPGKPTQNAFAESFQGKMRDECLNEHLFFSMNHARASSPAGSRTSTRRGPFSDRLHDAGRYAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5U2</accession>
    <name>A0A2M9P5U2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003155">
        <property type="protein sequence ID" value="PJN92893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7218" checksum="B88C963FB075B769" modified="2018-04-25" version="1" fragment="single">SLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5W9</accession>
    <name>A0A2M9P5W9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003122">
        <property type="protein sequence ID" value="PJN92908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019062">
        <property type="term" value="P:virion attachment to host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005068">
        <property type="entry name" value="Phage_lambda_Stf-r2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03406">
        <property type="entry name" value="Phage_fiber_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="5986" checksum="3B6127F2340160EE" modified="2018-04-25" version="1" fragment="single">MQLLAARIGDLIGPASTSVAGIVRLSASVNSTSTSTAATPSAVKAANDNASNRALASRTIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z6</accession>
    <name>A0A2M9P5Z6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21105</name>
        <name evidence="2" type="ORF">CNY89_25185</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003047">
        <property type="protein sequence ID" value="PJN92940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001972">
        <property type="protein sequence ID" value="PJN93395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="69"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12237" checksum="A0C50F8CB213D1DD" modified="2018-04-25" version="1" fragment="single">TSGGRPRKADKREIVEAILYFLRAGCAWRLLPHDFPPWQTVYYYLRRWEREGVWAGVLHTLVMADREQAGREASPSAAILDSQSVRTADQKGAPKAMTPESASTAASGTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P676</accession>
    <name>A0A2M9P676_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Long-chain fatty acid--CoA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002695">
        <property type="protein sequence ID" value="PJN93074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="5"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10722" checksum="C9A1D18D918AC99C" modified="2018-04-25" version="1" fragment="single">MPNKEEYDLSSIKRCGYGAAPMPPEIVKQSMKFFQTDQFYNLCGLTEGGPGGIMLDPEGHKYHLGKGGKPIFLTEVKVVDSEGKETPPGMIGEFVIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6C9</accession>
    <name>A0A2M9P6C9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002704">
        <property type="protein sequence ID" value="PJN93070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7041" checksum="3E3F8F5AA6353F91" modified="2018-04-25" version="1" fragment="single">MKRSRFTEEQIIGVLREHEAGAVVAELCRKHGLSSATFYAWKAKYGGMDVSEARRLKALEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D0</accession>
    <name>A0A2M9P6D0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002689">
        <property type="protein sequence ID" value="PJN93075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7691" checksum="B35BE1942B97B553" modified="2018-04-25" version="1" fragment="single">MCDALVATLSYAFGLRKVRTASSLTGALENIREEGVPDAVALDLNLPDAEGAEGVILLRRQIGDAPLAVIVGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q0</accession>
    <name>A0A2M9P6Q0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Elongation factor Tu</fullName>
            <ecNumber evidence="4">3.6.5.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">tuf</name>
        <name evidence="4" type="ORF">CNY89_22465</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.3" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01002295">
        <property type="protein sequence ID" value="PJN93241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009001">
        <property type="entry name" value="Transl_elong_EF1A/Init_IF2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004160">
        <property type="entry name" value="Transl_elong_EFTu/EF1A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03143">
        <property type="entry name" value="GTP_EFTU_D3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50465">
        <property type="entry name" value="SSF50465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GTP_EFTU_D3" evidence="3">
        <location>
            <begin position="14"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12160" checksum="58F31AD0BFF312AE" modified="2018-04-25" version="1" fragment="single">EGVERGQVLCKPGSVKPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVALPEGTEMVMPGDNLKFEVTLIAPIAMEEKLRFAIREGGRTVGAGVVSKIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X1</accession>
    <name>A0A2M9P6X1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002249">
        <property type="protein sequence ID" value="PJN93258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="79"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="17372" checksum="3A62BA87017AD1B6" modified="2018-04-25" version="1" fragment="single">MPPPRRLGRPRTTDLREVMNAILYIATTGCQWVQLPKDLPPYSTVQRYFYDWRDSGLLQTIRFALAMETRELEGREASPSAGVIDSQSVKTPKAAAFCGFDAGKKVKGRKRHIVVDTIGLLFGLVVHAADIQDRDGAPAVLKSIRHACPWLRHVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y2</accession>
    <name>A0A2M9P6Y2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002226">
        <property type="protein sequence ID" value="PJN93268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.240">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023198">
        <property type="entry name" value="PGP-like_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9259" checksum="CF218F8FD2C38985" modified="2018-04-25" version="1" fragment="single">MDGTLVDSQHAIVEAMTEAFEARGHVLPPRDEVLGIVGLSLNEAMAALAPHLPEVETQALAQAYRDGWLARRDAGLPVVDSPLYPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Z7</accession>
    <name>A0A2M9P6Z7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002117">
        <property type="protein sequence ID" value="PJN93312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8615" checksum="25FBFAD658CC10DA" modified="2018-04-25" version="1" fragment="single">MGDNTKDRLPPLLPDRYPAPDFFVCDLFDAAPKGDMASMEHPVFSLSTKPDRRIRRYENGPHYVEIRPNVVGLATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P703</accession>
    <name>A0A2M9P703_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002149">
        <property type="protein sequence ID" value="PJN93299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00034">
        <property type="entry name" value="HTHCRP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH crp-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7184" checksum="70976F282384E152" modified="2018-04-25" version="1" fragment="single">SGRKIDDGVEIGFPVTRADIAEMTGTTLHTVSRLMSAWERDGIVRSTRRHVVLTAPHRLVVLSGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P756</accession>
    <name>A0A2M9P756_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF4411 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002058">
        <property type="protein sequence ID" value="PJN93350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11732" checksum="C7F8426072903E0F" modified="2018-04-25" version="1" fragment="single">MWTAFDHLIEGSRMLASIEVLHELKKKDDDVYGWAKDRKESLFVEIDDGVQAEIVRIMQTYPKLVDTGKGKSGGDPFVIAQALAHNPRLVIVTQEAGGSADKPKIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C3</accession>
    <name>A0A2M9P7C3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20610</name>
        <name evidence="3" type="ORF">CNY89_20630</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001864">
        <property type="protein sequence ID" value="PJN93464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001860">
        <property type="protein sequence ID" value="PJN93467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="1"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11715" checksum="92D19EE528A805EE" modified="2018-04-25" version="1" fragment="single">RRARRILPALFFVMLTCVPFAWVWMTPSQFKDFSEAIVAVTLFSSNILFWLQTDYFAPLAELNPLLHTWSLAVEEQFYVFFPLLMIFLWRFGRRACWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G6</accession>
    <name>A0A2M9P7G6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome d ubiquinol oxidase subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">cydB</name>
        <name evidence="8" type="ORF">CNY89_20305</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001800">
        <property type="protein sequence ID" value="PJN93506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43141">
        <property type="entry name" value="PTHR43141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00203">
        <property type="entry name" value="cydB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="17306" checksum="5AB0E5F8552F0403" modified="2018-04-25" version="1" fragment="single">MGIDLPLIWAGIIVFGLMMYVVMDGFDLGIGILFPFIPGRDDRDVMVNTVAPVWDGNETWLVLGGAGLLAAFPQAYATILSALYLPLMLMLAGLIWRGVAFEFRFKADEHHKPFWDKAFTWGSYIATMSQGMALGGFIDGFELTETGSFAGGALDWLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M8</accession>
    <name>A0A2M9P7M8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Mrr_cat_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001748">
        <property type="protein sequence ID" value="PJN93542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039442">
        <property type="entry name" value="Mrr-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13156">
        <property type="entry name" value="Mrr_cat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mrr_cat_2" evidence="2">
        <location>
            <begin position="55"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="14224" checksum="6C1FF8C4AF1FA7BF" modified="2018-04-25" version="1" fragment="single">MRRAHEPFRSASGRDRRGKALHPLQALLAQYRSAARTEREKGTYFERLTIAFLEHDPIQVEQYDGIWTYAEWAKKKGWDGRDTGIDLVAKLRHEQGYAAIQCKFYDPDHRIRKEDIDSFIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T8</accession>
    <name>A0A2M9P7T8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TauD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001686">
        <property type="protein sequence ID" value="PJN93585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042098">
        <property type="entry name" value="TauD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003819">
        <property type="entry name" value="TauD/TfdA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02668">
        <property type="entry name" value="TauD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TauD" evidence="2">
        <location>
            <begin position="28"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22977" checksum="CB000646C2993B68" modified="2018-04-25" version="1" fragment="single">RRRGRMIQSRTLTHMRYNILRPSTPDGEIGDDTLAALRGHLAADGWALLRGFEVDMARFSALTAQVCRRITFDPARAMSQDNTQMVDAGLGPIGLHIENGNTPVCPDVVLFYSARAAFEGSQTTICDGRAVAEQFDADLRARWSRPVTVRRRLPELLWKRYLANEHPAISRPEEVREEHILQFQAAIPNQSFSLNADGSLDYGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X8</accession>
    <name>A0A2M9P7X8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001594">
        <property type="protein sequence ID" value="PJN93654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005183">
        <property type="entry name" value="DUF305"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03713">
        <property type="entry name" value="DUF305"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF305" evidence="1">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5556" checksum="614904157B43D2A7" modified="2018-04-25" version="1" fragment="single">MIAHHQGAIDMAQVLLEHGDDPEMIELAGEIIAAQVGEIEQMTTWLAENAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P858</accession>
    <name>A0A2M9P858_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001533">
        <property type="protein sequence ID" value="PJN93708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008173">
        <property type="term" value="F:RNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004384">
        <property type="entry name" value="RNA_MeTrfase_TrmJ/LasT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42786">
        <property type="entry name" value="PTHR42786"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="21226" checksum="A5F272B562318BDD" modified="2018-04-25" version="1" fragment="single">ITETVLTVLGGLSPLLLVVAYGSALGISFYIAHRLFISIEVLSAKVSAGVDRFRGVEKLFKEFMGERHEFERDAALRRPIVSVPVNPAFGSLNLGQCVLLMAYEWMRSGDATPPADYVLAGTRRASGIEIDKLREHLVERLDAVGFFFPEHKRPSMIVILQNLLSRAPLTDADVRVVHGMIRALAVKVKGRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P877</accession>
    <name>A0A2M9P877_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001496">
        <property type="protein sequence ID" value="PJN93741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10371" checksum="D0FC54336327E9F7" modified="2018-04-25" version="1">MSTKIKDVAEDIDEEAGRFAGEISALKAEVMRLARRLGEDEAELAARVRSMAGDVTGEFRRVEGDIIKATRDNPWKWLGIAAIFGVVVGLVLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P886</accession>
    <name>A0A2M9P886_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_18610</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001485">
        <property type="protein sequence ID" value="PJN93756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017039">
        <property type="entry name" value="Virul_fac_BrkB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03631">
        <property type="entry name" value="Virul_fac_BrkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="47"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17105" checksum="890583EE6AF8B9E0" modified="2018-04-25" version="1">MAGDGRRKETAMASTAGRTATRPSRFGWRAWRAILGRVWGSIGKHHISIVAAGVAFFGMLSIFPTMAALIAFYGLLADPSSILASLAAAEQVLPGDVHAMIEEQIRALISAPQGTLGVAWALSLGAALWTSRMGVTGLMEGLNVVYGEVDAADSGGNTCCRWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P888</accession>
    <name>A0A2M9P888_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_18605</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001484">
        <property type="protein sequence ID" value="PJN93757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00580">
        <property type="entry name" value="UvrD-helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51198">
        <property type="entry name" value="UVRD_HELICASE_ATP_BIND"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5" id="KW-0347">Helicase</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="6">
        <location>
            <begin position="1"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="26568" checksum="C19B7E050C25884C" modified="2018-04-25" version="1" fragment="single">VAAWVLWRLDGGIDHILVDEAQDTSPAQWSVIARRPGARSTSTTSSTAPAPCCRASEVAAWVLWRLDGGIDHILVDEAQDTSPAQWSVIAAITDEFFAGRGARDLTRTVFVVGDEKQSIYSFQGADPAAFGSMQRRFGRILEEMGDALARCDLLWSFRSARPILSLVDAVFTGKAGEGFAAPPRHLPIAPDAPGRVEVWPFLEKPEKEEESPWDLPEQAAPFEDPAERLADRIAGEIRTWLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D1</accession>
    <name>A0A2M9P8D1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DDE_Tnp_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18510</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001469">
        <property type="protein sequence ID" value="PJN93770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="2">
        <location>
            <begin position="127"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19525" checksum="6E8700B62841AAC9" modified="2018-04-25" version="1" fragment="single">MRVIHAAADSLTPSQHHAQTPPSALPERPDRQPVGDDRANDPGRHVGWTASEGRQARDRRGDPVFPAGGLRVAALAARLPTLADGLLLPAPLGARRRLGRRAPHPRHGRPGAGGPGSLALGGDPRQPKRPDGRSKGGSKGYDAGKRIHGRKRHILTDTDGRLLAVEVHGANVQDRDGAKGVLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F9</accession>
    <name>A0A2M9P8F9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001433">
        <property type="protein sequence ID" value="PJN93809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019068">
        <property type="term" value="P:virion assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006429">
        <property type="entry name" value="Phage_lambda_portal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05136">
        <property type="entry name" value="Phage_portal_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01539">
        <property type="entry name" value="portal_lambda"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="259" mass="28404" checksum="E017448AA74BD3DC" modified="2018-04-25" version="1" fragment="single">ARRVLARQAFETLTRGYDGAARGRRTEGWRAPGSSADTEIGIAGALLRDRMRDLVRNNPHAAKAVAVLVNNIIGAGIMPRAASGDDKLDRKVDAIFERWTADCDADGQLDFYGLQTLICREMVEAGEVLVRRRLRRASDGLPVPLQLQVLEADFLDATKSGALGAGRLVQGIEFDPVGKRRAYWLHAEHPGDAYGALQNGLQSRPVPATEIAHVYEKQRTQARGVPWGAPVIRSLRDLDDYEVAELVRKKTEACVTAIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G5</accession>
    <name>A0A2M9P8G5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">VapC toxin family PIN domain ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001432">
        <property type="protein sequence ID" value="PJN93810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002716">
        <property type="entry name" value="PIN_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01850">
        <property type="entry name" value="PIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PINc" evidence="1">
        <location>
            <begin position="4"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8683" checksum="31349E41D58C1EA8" modified="2018-04-25" version="1" fragment="single">MIGIDTNVLVRYLAQDDPAQSSVATRIIEEFSVEQPGFISQVALVETVWVLTRAYKMSREQIADTLEALLRAREVMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H3</accession>
    <name>A0A2M9P8H3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PQQ-dependent dehydrogenase, methanol/ethanol family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001406">
        <property type="protein sequence ID" value="PJN93845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01011">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="266" mass="28632" checksum="D0AE04184CE47D04" modified="2018-04-25" version="1" fragment="single">PHDEWDFDGVNENILADKEIDGKMRKILVNFDRNGFAYTLDRETGELLVAEKYDPAVNWATHVEMDPNSEQYGRPQVVAEYSTAQNGEDTNTTGICPAALGTKDQQPATYSPKTGLFYVPTNHVCMDYEPFRVSYAAGQPYVGATLSMFPAPDSHGGMGNFIAWDAAEGKIAWSLPEQFSVWSGAMATAGDVVFYGTLEGYLKAVDAKTGEELYKFKTPSGIIGNVFTYEHEGKQFVGVLSGVGGWAGIGLAAGLTNANDGLGAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I6</accession>
    <name>A0A2M9P8I6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribulose bisphosphate carboxylase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001396">
        <property type="protein sequence ID" value="PJN93856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000894">
        <property type="entry name" value="RuBisCO_ssu_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036385">
        <property type="entry name" value="RuBisCO_ssu_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00101">
        <property type="entry name" value="RuBisCO_small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55239">
        <property type="entry name" value="SSF55239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuBisCO_small" evidence="1">
        <location>
            <begin position="2"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7434" checksum="B4C5F75E3506E0F7" modified="2018-04-25" version="1" fragment="single">LIELDECRKAHGDAYVRLNAFDSTRGFETVTMSFIVNRPAIEPRIRMTRTEGNGRTVHYTHQAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K1</accession>
    <name>A0A2M9P8K1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001402">
        <property type="protein sequence ID" value="PJN93849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="23261" checksum="370BB36E0A9389FB" modified="2018-04-25" version="1" fragment="single">MPRLAFYRPDGAPDRAPLPWSDPSPARGELFGIERLEQHARSLAAVQQVSERPPRVPPLSRRLDDNAAVLLAAYRASARELESGRPVVPAAEWLLDNYHLVEAQIREIHDDLPSGYYRQLPKLAEGPFAGYPRVFGLAWAFVAHTDSHFDPEKLRRYLAAYQQVQPLTIGELWAVAITLRIALVENLRRLSDQITAGRAARAEADALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P2</accession>
    <name>A0A2M9P8P2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-asparaginase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001368">
        <property type="protein sequence ID" value="PJN93894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004067">
        <property type="term" value="F:asparaginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036152">
        <property type="entry name" value="Asp/glu_Ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006034">
        <property type="entry name" value="Asparaginase/glutaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040919">
        <property type="entry name" value="Asparaginase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027473">
        <property type="entry name" value="L-asparaginase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17763">
        <property type="entry name" value="Asparaginase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001220">
        <property type="entry name" value="L-ASNase_gatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53774">
        <property type="entry name" value="SSF53774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51732">
        <property type="entry name" value="ASN_GLN_ASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Asparaginase_C" evidence="1">
        <location>
            <begin position="8"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="12753" checksum="D5C380597C8400C0" modified="2018-04-25" version="1" fragment="single">TIDALPLVTIAYGSGNMIPQVFDAMAAAGAQGIVTAGVGNGSIPSYLVDKLNEIRGQGVQIVRSSRVGDGIVLRNAEEKDDENDWVVASDLNPQKARLLTALAIEKGASSAELQRMFYEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S9</accession>
    <name>A0A2M9P8S9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001318">
        <property type="protein sequence ID" value="PJN93946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12801">
        <property type="entry name" value="Fer4_5"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="134"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="196"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="2">
        <location>
            <begin position="71"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="2">
        <location>
            <begin position="177"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="29999" checksum="BB7518058E38471E" modified="2018-04-25" version="1" fragment="single">GVIGFVGWWAQAQLSIVTVLATLRALTGGGSLAGVIGFVGWWAQAQLSIVTVLATLRALTGGGSLAVLLYDPVSLLVWGAAILGFVLWGRGLFCGWLCPFGAMQEFAHHAGRLLRLPQIEPSPAWDRRLKSLKYLALAGLVAIAFLAPAQAEKAAEIEPFKTAVTTIFVREWGYVAYAVAWLALGMVVFKAFCRYLCPLGALMAIGGMLRARAWIPRRMECGAPCQLCRVRCRYGAIEASGRIDYAECFQCLDCVSIHDDPKRCVPLVLAAKRRQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U6</accession>
    <name>A0A2M9P8U6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001323">
        <property type="protein sequence ID" value="PJN93939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9906" checksum="822F0E6565A79647" modified="2018-04-25" version="1" fragment="single">MMKPDESIQIFVPLKVRKQNGRPKIMPPATYLPSEDRTQDPHILRAIGRAWGWRRRMEAGEFNTVTDLAKAVGLAERHVSRQLRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P910</accession>
    <name>A0A2M9P910_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001270">
        <property type="protein sequence ID" value="PJN94010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="179" mass="20109" checksum="663DAC1FCCFF043B" modified="2018-04-25" version="1">MTYHTPVPPPEQSFRPLVFLDFEACALSRASWPVEIGYSWIADGQIWTRSSLIAPRPDWALSEWSEVSARVHGIALDDLWTAPSADELAARIDWFAECEVISENPAWEQLWLDRLREGRGPRIEVSSLRKALRDRLDDGEATVVVQSLFRSTAPHRAGPDAERLARAWFDATIALGLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P925</accession>
    <name>A0A2M9P925_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type IV secretion protein DotN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001255">
        <property type="protein sequence ID" value="PJN94031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="28808" checksum="EA231AEFE2F4F507" modified="2018-04-25" version="1">MYDQPNPPVARPPNGAYDPLSAQAIRLNAHVSYLDPPFALSFPTLLAPDPITQIGHRFNGSGIKAAVTARAGYVCHYCGLRARKYQEVVGPVSTVTAAEAHLACIFCAQVMALDLVHSMRSGVLIHLPEVGQARLHACARIIYVCRISQGRAADLARRVLDAILTRRARAKARLGSDDPGDLVTMLVGCRTEAEAEALRRQLDGIRLFPLDRRLVREMELEFNQFPQILAYYRSKDGPFGGLPPKDMDLRAFEATFAGLTATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P958</accession>
    <name>A0A2M9P958_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16670</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001223">
        <property type="protein sequence ID" value="PJN94073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006214">
        <property type="entry name" value="Bax_inhibitor_1-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01027">
        <property type="entry name" value="Bax1-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="30"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16571" checksum="2719536B58D2DE49" modified="2018-04-25" version="1">MADFETIRRSGAGVRTAQIDEGLRAHMNKVYGLMSVAMLITGLVAWVVGTDFAHAVAGEPTMLIPAGVVQAMFASPIRYVIMFAPLIFVFGLSAGINRLSDSAAQMVFYAFSAVMGLSIAWIFAVFTGASIAGPDHPTHPMLAESAYLKALFLRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P976</accession>
    <name>A0A2M9P976_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001225">
        <property type="protein sequence ID" value="PJN94070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025915">
        <property type="entry name" value="Phage_gp49_66"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13876">
        <property type="entry name" value="Phage_gp49_66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10989" checksum="E1D3DD69B76563C2" modified="2018-04-25" version="1">MSIDEAGIEAEIQSKGLTAPRLTPALIDETITGEDYHVFPGTTLTVCALRLRNGFVVTGESAAASPENFDQAIGRKIARDNARQKIWTLEGYLLRERLSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C2</accession>
    <name>A0A2M9P9C2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycerol-3-phosphate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001171">
        <property type="protein sequence ID" value="PJN94146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3607" checksum="A0BF8C0540DE8A01" modified="2018-04-25" version="1" fragment="single">HGVELPIAAAVAAVLDGQLTLGAAIDALLARPLKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C4</accession>
    <name>A0A2M9P9C4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001179">
        <property type="protein sequence ID" value="PJN94133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="25287" checksum="56F68D21242824E4" modified="2018-04-25" version="1">MKLKKWVKLPTRWIFDGGLRKLRWKEEEGSASIAGLLLLSVIAHHADAETGLAHLTYDTMGTATGLSRGKIADGLDMLAKFKIVEREPQGRSSYKLAGYDPKQGWAKLPAQGLYTEERIKPFCDFTLRNHTELDAMKAYYAFAAFRNRETNAALMSYDKIVEHTGIQRQWVSTATSLLVSAKLIRITQTASGASEYGVSNSYRLAHLDSYKHAGTTGRKMLEAAEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D3</accession>
    <name>A0A2M9P9D3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M23</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16270</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001173">
        <property type="protein sequence ID" value="PJN94143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045974">
        <property type="entry name" value="DUF5930"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19353">
        <property type="entry name" value="DUF5930"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5930" evidence="2">
        <location>
            <begin position="3"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M23" evidence="1">
        <location>
            <begin position="91"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="197" mass="21320" checksum="9E383B349A08F7A4" modified="2018-04-25" version="1" fragment="single">PGSTPTPVLAKARSEYGGAGGPLIPVGVSSRSFPGDTTTVTRFDELMVDVDRMNLLRIALGKVPYATPVFDTFRYTSPFGVRRDPMGRGRRMHTGIDFAAPRGTPIHATADGVVISAKSESGYGQTVRIQHEFGFETVYAHQSRLRVKAGQRVSRGDHIGDMGSTGRSTGSHLHYEVLVNGRPVNPMTYVEAAKDVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G0</accession>
    <name>A0A2M9P9G0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001154">
        <property type="protein sequence ID" value="PJN94170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="14964" checksum="0E90053C94C97FF3" modified="2018-04-25" version="1" fragment="single">MDSDNVFATDTLSPDSGSGNPLKVIGASGNQGIDGMLTDRAWAASTIDYSFPTTNIYGYTQLTDLPNGMFAVTLAQQNAAHFALNAEVGVNATAKAGFSVEGFTNLGVFNDLSPDGDDEIRLANTTSASLGTARVADFPGNYLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J2</accession>
    <name>A0A2M9P9J2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001120">
        <property type="protein sequence ID" value="PJN94217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014993723" evidence="1">
        <location>
            <begin position="21"/>
            <end position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="19884" checksum="2E9DBEF4AEE0533A" modified="2018-04-25" version="1">MTFARCASFAVLTAAFAASAVQTQAAAERIASHNDWTVFVAGEPKECYIVSQPTSSKATRDGKAVEVDRGDIRLFVRFNPSENVKNEVSFTGGYPLRAGTAVKVVLGSETFSLNPGPGDASGLGLALGRGRRPHGRLHAARLHRRRHRRLVARHDDRRQLLPLRLHRRGERGGEPLQVIRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J6</accession>
    <name>A0A2M9P9J6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Universal stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001122">
        <property type="protein sequence ID" value="PJN94213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="1">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16343" checksum="1F6FB128AD770636" modified="2018-04-25" version="1">MRKFLVLLDDTPEMLNALRYAALRAAKTGGGVEMLAVIDSEGFQHFLGVAEVMRAEAREKIEAHFQIFKDRMEKREGVTPTLAVREGDKVEAIIQHVRADPEIGVLVLGGGVDKSGPGPVVAALTGRRMGDLGVPITIVPGSLTKERIIATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W8</accession>
    <name>A0A2M9P9W8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001043">
        <property type="protein sequence ID" value="PJN94330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11310" checksum="8816F3A01B9B27F3" modified="2018-04-25" version="1" fragment="single">MSPGVRFEGTARIAGRTLFGPLEIELPPAAWTCLLGASGVGKSTVLRLLADLPTGVAFEGTEAARREYRRARPRYASDMTDREWALVAPFMPPPRRLGRPRTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X1</accession>
    <name>A0A2M9P9X1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001041">
        <property type="protein sequence ID" value="PJN94336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="1">
        <location>
            <begin position="14"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5493" checksum="29559C2ABC58E5D8" modified="2018-04-25" version="1" fragment="single">MKPVPPSDDVISELGLLRRYARSLTRDRDDAEDLVQDTLLRALLRALE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA05</accession>
    <name>A0A2M9PA05_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001026">
        <property type="protein sequence ID" value="PJN94364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="1">
        <location>
            <begin position="1"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="402" mass="46155" checksum="ED5E8DE850737107" modified="2018-04-25" version="1" fragment="single">GITERLPYLADLGVDAIWLSPIFTSPMADMGYDVADYTDIDPSFGTLADFDGMVARAHELGLKVIIDQVLSHSSSQHPFFQESRKSRDNPKADWYVWADPKHDGSPPNNWCSVFGGPAWEWDTRRRQYYFHNFLAEQPDFNFHNPEVQDWLLSTMKFWLDRGVDGFRLDTVNFYFHDKLLRDDPADFRRKAVPEWNPYWMKYHLFSKNQPENLVFLERMRALLDQYDGRAMVGEMGESHHAIRMMGEYTTGRRLHKCYSFEMLGDAYEAGHFRRQIEEFFSGAPGGWPTWAFSNHDVVRHATRWARHGASEDALAKQAAALLLSLQGSICVYQGEELGQTETDLAYDELTDPQGLRFWPENKGRDGCRTPMVWDDAPNGGFSTGAPWLPVKAPQAARHVAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA37</accession>
    <name>A0A2M9PA37_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14770</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001007">
        <property type="protein sequence ID" value="PJN94396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018120">
        <property type="entry name" value="Glyco_hydro_1_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10353">
        <property type="entry name" value="PTHR10353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00131">
        <property type="entry name" value="GLHYDRLASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00572">
        <property type="entry name" value="GLYCOSYL_HYDROL_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="3">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="204" mass="22872" checksum="A0C381F48652222E" modified="2018-04-25" version="1">MYNRWFASGILQGRYPEEALEGLAPHMPDGWQDDFAAITAPLDWIGVNYYTCKRIAPLPGTPWPALEEVPGPLPKTDMGWEIYPEGMHHFLTGLNRMAGRDLPIYVTENGMAAGEPEADASRIAYLESHLAEARRAIAEGVPLKGYFIWSLLDNYEWSFGYEKRFGLVHVDFETLERRPKASWHALARALSGADAPLEPQKALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD5</accession>
    <name>A0A2M9PAD5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14145</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000940">
        <property type="protein sequence ID" value="PJN94498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="PTHR30544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14163" checksum="324B6B68D24CAA43" modified="2018-04-25" version="1" fragment="single">QLVPINRKWNIAALLDACRAYPRLSNSERITFEYVMLKGVNDSDADARRLVKLIAGIPAKINLIPFNPWPGAPYERSDPDRIEAFGRIVNRAGYASPVRTPRGEDIMAACGQLKSASERVRRATVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH2</accession>
    <name>A0A2M9PAH2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Type I secretion system permease/ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13890</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000917">
        <property type="protein sequence ID" value="PJN94543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030256">
        <property type="term" value="C:type I protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030253">
        <property type="term" value="P:protein secretion by the type I secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010128">
        <property type="entry name" value="ATPase_T1SS_PrtD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24222:SF0">
        <property type="entry name" value="PTHR24222:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="42"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="140"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="6"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="31324" checksum="12F883CF5BC52F9B" modified="2018-04-25" version="1" fragment="single">MGGLFATVAIFSAVVNILMLTGSLYMLQVYDRVLASGSTETLLALSILVAGLFAIMGVLDYVRARVAARIGATAQARLDARVFRAMLRRSVHPNERAKPASGLKDLEAVQRFAGSPVLFAIFDMPWAPFFILLIYAFHPWLGHLAVIGMIALVGLTIVNQMMTRKPEGEANLATMQGDAFAETIRQQGELIQALGMRGAVIDRWSDLRGRAMRAQLVSSDRVGQFSTISKTFRFFLQSAMLGLGAYVVLRGEMSAGAMIAGSILLGERSRNFVPSALRVTRTQPNLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ4</accession>
    <name>A0A2M9PAJ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Phospho-N-acetylmuramoyl-pentapeptide-transferase</fullName>
            <ecNumber evidence="9">2.7.8.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">UDP-MurNAc-pentapeptide phosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">mraY</name>
        <name evidence="10" type="ORF">CNY89_13775</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the initial step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan: transfers peptidoglycan precursor phospho-MurNAc-pentapeptide from UDP-MurNAc-pentapeptide onto the lipid carrier undecaprenyl phosphate, yielding undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide, known as lipid I.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>di-trans,octa-cis-undecaprenyl phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine = di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP</text>
            <dbReference type="Rhea" id="RHEA:28386"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="ChEBI" id="CHEBI:61386"/>
            <dbReference type="ChEBI" id="CHEBI:61387"/>
            <dbReference type="EC" id="2.7.8.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="9">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the glycosyltransferase 4 family. MraY subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.13" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000906">
        <property type="protein sequence ID" value="PJN94563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008963">
        <property type="term" value="F:phospho-N-acetylmuramoyl-pentapeptide-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051992">
        <property type="term" value="F:UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06852">
        <property type="entry name" value="GT_MraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00038">
        <property type="entry name" value="MraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000715">
        <property type="entry name" value="Glycosyl_transferase_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003524">
        <property type="entry name" value="PNAcMuramoyl-5peptid_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018480">
        <property type="entry name" value="PNAcMuramoyl-5peptid_Trfase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22926">
        <property type="entry name" value="PTHR22926"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00953">
        <property type="entry name" value="Glycos_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10555">
        <property type="entry name" value="MraY_sig1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00445">
        <property type="entry name" value="mraY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01347">
        <property type="entry name" value="MRAY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01348">
        <property type="entry name" value="MRAY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3 9" id="KW-0132">Cell division</keyword>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0133">Cell shape</keyword>
    <keyword evidence="9" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="97"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="134"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="172"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="200"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="239"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="263"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="288"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="338"/>
            <end position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="360" mass="38784" checksum="99E1B805E6CAD0BC" modified="2018-04-25" version="1">MLYLLAELPEQAGVFNLFRYITFRAGGAFFTALVFGFLFGRPLINLLRVRQGRGQPIRADGPAGHAVKAGTPTMGGLLILSAVLFSTLLWARLDNGFVWLVLFVTFGFGLIGFADDYAKVTKQTVAGVSSRIRLLAGFAIALIASLWAMWLHPDELTGRLAFPVFKAFLLDLGWFFVPFGMLVIVGSANAVNLTDGLDGLAIMPVMIAAGSLGVIAYVVGRVDFTNYLDVHFVPGTGEITVFVAALIGGGLGFLWYNAPPAAVFMGDTGSLSLGGALGAIAVATKHEIVLAIVGGLFVVEALSVIIQVAYYKRTKKRVFLMAPIHHHFEKKGWAEPQIVIRFWIVSLILALIGLATLKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ0</accession>
    <name>A0A2M9PAQ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000881">
        <property type="protein sequence ID" value="PJN94601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8649" checksum="A5476726DC493166" modified="2018-04-25" version="1">MALEQFRAQIAMIMDEIAAQPEDAHELQERLREKLDEMRALGLEVPEDLAEFEDALEEDLEEGVSPEDGATPPADPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT3</accession>
    <name>A0A2M9PAT3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000852">
        <property type="protein sequence ID" value="PJN94645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11407" checksum="58A3DEAF7E9239E5" modified="2018-04-25" version="1" fragment="single">MDFQMAVFGGTDGNDVLFGGAEADFLIGLGGDDDLRGGAGGDFFDGGAGRDRVRFDTATREIGVDLTAGIGIGFGLESVGDTYKSIEDVLGSNFSDFIRGSIGDNVLEGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX3</accession>
    <name>A0A2M9PAX3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000829">
        <property type="protein sequence ID" value="PJN94687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="1">
        <location>
            <begin position="6"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11634" checksum="299D0C3DF250AFBF" modified="2018-04-25" version="1" fragment="single">TLDATVVSAPEAFAMVTAEAAAALDASDRLGTLEPGKLADMILLDLGRIHAVPLFDPLTHLVYSASKSDVRHVFVGGVQVVRDGALTRLDIDETLDEVRALTPRIKASIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX6</accession>
    <name>A0A2M9PAX6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_13095</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Secreted</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M10B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000837">
        <property type="protein sequence ID" value="PJN94675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090729">
        <property type="term" value="F:toxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04277">
        <property type="entry name" value="ZnMc_serralysin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006026">
        <property type="entry name" value="Peptidase_Metallo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003995">
        <property type="entry name" value="RTX_toxin_determinant-A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034033">
        <property type="entry name" value="Serralysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01488">
        <property type="entry name" value="RTXTOXINA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00235">
        <property type="entry name" value="ZnMc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0964">Secreted</keyword>
    <keyword evidence="5" id="KW-0800">Toxin</keyword>
    <keyword evidence="10" id="KW-0843">Virulence</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ZnMc" evidence="13">
        <location>
            <begin position="40"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="330"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="12">
        <location>
            <begin position="335"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="356" mass="38476" checksum="9769C3731A27AA9F" modified="2018-04-25" version="1" fragment="single">MQNGIRPAASLPVFDDDQMAAYLREGFWRDNDERPRSFNLSDTGDGAKGGTLQYYAAGLEPEAEAMVASALALYGEVLGVSFERLAMQSVRIDLRFTDTSRGAFTKTYMHDGGAVGLATINVEAAWLNRNGDEIGDYSYLTYIHEIGHALGLGHAGDYDGYAVYVSDTEDPEYGLNSNVSLNESWQMTMMSYLDQDMNPTVAADRAIPLTPMIADWIALETIYGASAAYSGNTVWGFGTTIAEGPFAQIAERAGRNAFSLLDRGGVDLLDLSGFAQDQRIDLRPERYSDVAGLRGNMGIARDSVIENFRSGSGSDRITGNGVANRIWGGDGDDRISGGRGSDRLWGGDGRDELFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ8</accession>
    <name>A0A2M9PAZ8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF2382 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000823">
        <property type="protein sequence ID" value="PJN94699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019060">
        <property type="entry name" value="DUF2382"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09557">
        <property type="entry name" value="DUF2382"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2382" evidence="1">
        <location>
            <begin position="9"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="21134" checksum="D5077585DADB1D60" modified="2018-04-25" version="1" fragment="single">MRDDDPPSLELIEETLTVAKRQVVTGRVRVNVQTLTVEEIARADLSGESVEVTRVPIGRLVDAAPPTRVEGDVTIIPILEEVLVVETRLNLREEVHIRRRTTVETVEAPVQLRRQRAAVERIDPATGDVDPRDRRDPTLYQFKPARILPMTDYNELSAAAAMAHPEAPQHAGGAPVAVDGDVDAAVSWRRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB60</accession>
    <name>A0A2M9PB60_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000782">
        <property type="protein sequence ID" value="PJN94771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047429">
        <property type="term" value="F:nucleoside-triphosphate diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029001">
        <property type="entry name" value="ITPase-like_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003697">
        <property type="entry name" value="Maf-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02545">
        <property type="entry name" value="Maf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52972">
        <property type="entry name" value="SSF52972"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8614" checksum="42A2C12E3B0483DE" modified="2018-04-25" version="1">MASNRLILASASPRRLELLAQVGVFPAEIRVADIDETPHPRERPEACALRLAELTLPKGPHTALKPGEQSGPRQRAGKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK8</accession>
    <name>A0A2M9PBK8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">UDP-N-acetylmuramate--L-alanine ligase</fullName>
            <ecNumber evidence="4">6.3.2.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_11620</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-alanine + UDP-N-acetyl-alpha-D-muramate = ADP + H(+) + phosphate + UDP-N-acetyl-alpha-D-muramoyl-L-alanine</text>
            <dbReference type="Rhea" id="RHEA:23372"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57972"/>
            <dbReference type="ChEBI" id="CHEBI:70757"/>
            <dbReference type="ChEBI" id="CHEBI:83898"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.8" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000700">
        <property type="protein sequence ID" value="PJN94912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008763">
        <property type="term" value="F:UDP-N-acetylmuramate-L-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00046">
        <property type="entry name" value="MurC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000713">
        <property type="entry name" value="Mur_ligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005758">
        <property type="entry name" value="UDP-N-AcMur_Ala_ligase_MurC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01225">
        <property type="entry name" value="Mur_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01082">
        <property type="entry name" value="murC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="6" id="KW-0132">Cell division</keyword>
    <keyword evidence="7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="10" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="14" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase" evidence="11">
        <location>
            <begin position="14"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_M" evidence="13">
        <location>
            <begin position="116"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="12">
        <location>
            <begin position="318"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="427" mass="45373" checksum="0096FB860AC2EA2F" modified="2018-04-25" version="1" fragment="single">MNGQTRLPHDIGAIHFTGIGGIGMSGIAEVLLNHGFSVQGSDVKASPITDRLAAKGARIFIGQKAENLEGARVVVISTAIKPGNPELDAARLKNLPVVRRAEMLAELMRLKSCVAVAGTHGKTTTTSMVAALLDGGGLDPTVINGGVIRAYGSNARIGAGDWMVVEADESDGSFNRLPAQVAIVTNIDPEHLDHWGDFEAVKAAFDAFVSQTPFYGLAVCCIDHPEVQALVGRITDRRVCTYGFSPQADVQAKNLRFENGSARFDVALHAEGQVIEGVILPMTGDHNVSNALAAIAVARHLGIGKDAIREALAGFEGVNRRFTRVGEWNGVTIIDDYGHHPVEIAAVLRAARQATQGRVIAVHQPHRYTRLRDLFVQFCGAFNDADVVAITDVYSAGEAPIEGVSRDTLVGGLIAHGHRRALPVAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ6</accession>
    <name>A0A2M9PBQ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Na+/H+ antiporter subunit E</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_11300</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CPA3 antiporters (TC 2.A.63) subunit E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000672">
        <property type="protein sequence ID" value="PJN94964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002758">
        <property type="entry name" value="Cation_antiport_E"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34584">
        <property type="entry name" value="PTHR34584"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01899">
        <property type="entry name" value="MNHE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019239">
        <property type="entry name" value="MrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17759" checksum="77C3B0247B175F5F" modified="2018-04-25" version="1">MTRLFPYPLLWAGLTLMWLLLTRFSLGNLILGTAVATIAGLAVSALRPERPRLRRIDLIAQLFGRIMADIVRSNVAVARLILTGGPAKSGFVEIPLELRDPTGLAILAIVLTSTPGTAWIDYDSAHGRLLLHVFDLREADDWREFIKTRYESPLLEILR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC30</accession>
    <name>A0A2M9PC30_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000603">
        <property type="protein sequence ID" value="PJN95106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="338" mass="35830" checksum="5D0EE0C64E967190" modified="2018-04-25" version="1">MPNRVFVPQVVSAVAPGDELFIFENNTTTQRTVYEADGVTVLNQPLVANSDLTFDDFYILDSTACTLLMRSADDAVRPGYPVSDVYPSSVAGSSASQVAFDPIEGVPETNVQSALVAVAGLATSQPATALRSVFPWRTGGTGNAFTITPDPPLTAYGSSGFFLISPDRSAAVGAATLNVNGLGEIELRARDSNGSLRDLFPGEVRANRTLGVSFDGGRFFIEFGQWPIRITSGNDTIIRHSDGTLVVRKIVTLNLATTAFQDFAFPTGATFLGDSITASLSCNGDPSTPNTDTSGFLAALGNLALIAHATPTPRWRVSVRDTTSATISMCLRAEGRWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC69</accession>
    <name>A0A2M9PC69_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease III</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000590">
        <property type="protein sequence ID" value="PJN95129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004525">
        <property type="term" value="F:ribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00593">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000999">
        <property type="entry name" value="RNase_III_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036389">
        <property type="entry name" value="RNase_III_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14622">
        <property type="entry name" value="Ribonucleas_3_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00535">
        <property type="entry name" value="RIBOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69065">
        <property type="entry name" value="SSF69065"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00517">
        <property type="entry name" value="RNASE_3_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50142">
        <property type="entry name" value="RNASE_3_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase III" evidence="2">
        <location>
            <begin position="7"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10268" checksum="BBCE331695B3D110" modified="2018-04-25" version="1" fragment="single">MKLSRTMAEAAVRIGHDFRDPALLIEALTHPSMGGAHNQRLEFLGDRVLGLVIAEALIAQDPKAAEGDLAPRLNTLVRKETCAEVAQAVDLGAALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI4</accession>
    <name>A0A2M9PCI4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09595</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000533">
        <property type="protein sequence ID" value="PJN95249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="120"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="35829" checksum="402BB0B1E0EE1B46" modified="2018-04-25" version="1" fragment="single">AEAAARMTFEQAADACLAQRRSGFNSASHEATWWAPLPLHVLPTLGGRPVASIGIGDVVAVLEPIWLDKHRTATLVRGRIEAVLNWAISNEKRPGPNPAEWNDNLRHRLPAVSKAMRESDARPAVPVNDIARWYAACTAAPWPAARALQAVALTATRSIEARGMRWAELGGDVWTVPADRMKMREIHRVPISEPLLQLIEAQRKAVYDGPYRGSPLVFPSATGRELADLAVSDVMKKLHAADVAAGGGGWLDPASNAPAVPHGLRATFRIWAQEQRVDRDVAELALAHRERNAVVRAYARDDLLGLRRPVMAAWAGLLTGTTPVSTVGPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK9</accession>
    <name>A0A2M9PCK9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">X-Pro aminopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000535">
        <property type="protein sequence ID" value="PJN95244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032416">
        <property type="entry name" value="Peptidase_M24_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16188">
        <property type="entry name" value="Peptidase_M24_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="1">
        <location>
            <begin position="6"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M24_C" evidence="2">
        <location>
            <begin position="202"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="261" mass="27923" checksum="C89450448482C160" modified="2018-04-25" version="1" fragment="single">APAGALTEIDVVRRLEDIRRATGTLRDISFETICGAGPNGAIVHYRVSEASNRPVAPGELLLVDSGGQYPDGTTDVTRTLAVGPVPEGAARVFTLVLKGLVAMSRLTWPEGLCGREIDSTARAPLWAAGLDYDHGTGHGVGSYLGVHEGPAGLSRRSLEPIRPGMILSIEPGCYREGAYGIRIENLATVRSPEVPPGGERLMLSWETLTLVPIDRRLIDPALLEPGERAWIDAYHARVLAALEPLVEAGTARWLRQACAPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP4</accession>
    <name>A0A2M9PCP4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000507">
        <property type="protein sequence ID" value="PJN95311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014683378" evidence="1">
        <location>
            <begin position="19"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16081" checksum="D64DCB9454F6E33B" modified="2018-04-25" version="1">MRKLAVLALAVLAGCATGDVSVPRDPVLQQVTPNYGAMPTTSASSAGGGGMDFTSTIETALAEPGAAPAPAHMGAVTACPGCPPINPNGTPLDDDSLNLTLYTIEQQKVDARLAQQQLDAARAKLVVDRAGSVTTTGWGIIPTACTFTPFLSRDWW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ1</accession>
    <name>A0A2M9PCZ1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Phosphoenolpyruvate carboxykinase (ATP)</fullName>
            <shortName evidence="10">PCK</shortName>
            <shortName evidence="10">PEP carboxykinase</shortName>
            <shortName evidence="10">PEPCK</shortName>
            <ecNumber evidence="4 10">4.1.1.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">pckA</name>
        <name evidence="11" type="ORF">CNY89_08710</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>ATP + oxaloacetate = ADP + CO2 + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:18617"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="4.1.1.49"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="10">Binds 1 Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Carbohydrate biosynthesis; gluconeogenesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.49" evidence="4 10"/>
    <dbReference type="EMBL" id="PHNO01000467">
        <property type="protein sequence ID" value="PJN95400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00138"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004612">
        <property type="term" value="F:phosphoenolpyruvate carboxykinase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00484">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.449.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.228.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00453">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001272">
        <property type="entry name" value="PEP_carboxykinase_ATP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013035">
        <property type="entry name" value="PEP_carboxykinase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008210">
        <property type="entry name" value="PEP_carboxykinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015994">
        <property type="entry name" value="PEPCK_ATP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30031">
        <property type="entry name" value="PTHR30031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01293">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006294">
        <property type="entry name" value="PEP_crbxkin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF68923">
        <property type="entry name" value="SSF68923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00224">
        <property type="entry name" value="pckA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00532">
        <property type="entry name" value="PEPCK_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="5 10" id="KW-0312">Gluconeogenesis</keyword>
    <keyword evidence="11" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="10">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="237"/>
            <end position="245"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="258"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="286"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="324"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="449"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="548" mass="59719" checksum="3DB20CB8CBDE7E1F" modified="2018-04-25" version="1">MHMRQVSTDVVADAIDLTDVASVHRNLTEPALMQAAVSRGEGVIGLGGTLLVNTGKHTGRSPKDKFVVREPQVESSIWWENNAPLDPAKFDVLHQDMMAHIKGGELFVEDLFGGADPDYRLNVRVVTELAWHALFIRHLLRRPEASELVDFVPGFTILNCPSFKADPARHGVRSETVIAICFSKKLVLIGGTEYSGENKKSVFTILNYLLPEKGVMPMHCSANHAPDDEDDVALFFGLSGTGKTTLSADPSRILIGDDEHGWSDNGVFNFEGGCYAKTINLSASAEPEIYATTRRFATVIENMVYDPLTFELDFEDDSLTQNTRCAYPLEAISNASATARAGQPRNVVMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPSPTFSTCFGAPFLPRRPEIYGALLRDRIAASGASCWLVNTGWTGGAYGTGKRMPIKATRGLLTAALNGSLNKVEFRKDQNFGFEVPVDVPGVESGLLDPRSTWADPAAYDAQAAKLVGMFVKNFAQYEAHVGEDVKAAAVRRASTEFGPTLRQDRHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ2</accession>
    <name>A0A2M9PCZ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cold-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08650</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000463">
        <property type="protein sequence ID" value="PJN95409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7309" checksum="21FC94D7AB0AFCF7" modified="2018-04-25" version="1">MAKGTVKWFNTEKGYGFIQPADGGKDIFVHITAVQAAGLQSLKDNQPIEYELIDGRDGRKSAGDLKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC6</accession>
    <name>A0A2M9PDC6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07995</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000416">
        <property type="protein sequence ID" value="PJN95523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="10"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="26689" checksum="EB9DDCD1CF0F0099" modified="2018-04-25" version="1">MPASPPRHKPALAERIYHLIYSRISNGDYPANQKLPPEKTLAEEFGVSRPIVRAALERLREQGLVHSRQGAGSFVREVRTAPLGFARVETIADIQRCYEFRICIETSAAALAAERRNPAALAEIETALSLLNAATDSMTHREDADYAFHLAVTRAANNQYFEASMRALREHIYVGMKLHGQSLMTDGAKGLREVFREHDAIFEAIRARDASLAESLMRGHLSHSRERLFGGTLIDLSRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG1</accession>
    <name>A0A2M9PDG1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_07625</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000389">
        <property type="protein sequence ID" value="PJN95580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007343">
        <property type="entry name" value="Uncharacterised_pept_Zn_put"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30168">
        <property type="entry name" value="PTHR30168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04228">
        <property type="entry name" value="Zn_peptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="237" mass="25304" checksum="553577580870C94C" modified="2018-04-25" version="1" fragment="single">MDWRGRRTSGNLEDRRGRGGGAIRLGGIGGAGAIVALLIGMFLGVDVTPLLQGGGPVVSERQSGPNTIDDSTEEFVGVVLAETEDVWGQIFAESNLTYQDPRLVMFSGVTSSGCGTAQSAMGPFYCPNDQTIYLDTDFFELMSQRFGASGDFARAYVIAHEVGHHVQDELGTLGQVNQARSRLGEREANALSVRVELQADCYSGIWARAASDRLKLTDQDIRDALATAAAIGDDALQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR1</accession>
    <name>A0A2M9PDR1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_07195</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000359">
        <property type="protein sequence ID" value="PJN95652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="188"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="100"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="275"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="35892" checksum="A330ABE27807311B" modified="2018-04-25" version="1">MTYAASTGERPAPTRPGRSLQQQRARAAFWFLAPMLVMLLLVAAWPLARSIYFSFTDTTLNDLYGGSWVGFDNYLSWRTLPSGRTIFRGTLVDPAWWNAVWNTVRFSVVSVSIETVLGLLVALVLNAEFKGRGLVRAAILIPWAIPTIVSAKMWGWMLNDQFGIINDMLLSVGLIDQKIAWTANVDTAMFAVLIVDVWKTTPFMALLCLAGLQMIPRDIYEATRIDGVHPVKVFFKVTLPLVRPALMVAVIFRMLDALRIFDLIYVLTPNSKATLRGRGPDAARSGDGGRPDRGGGGGAGGRRGGRLASGADGIRAARAGVALDPGRSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE40</accession>
    <name>A0A2M9PE40_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome c oxidase subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06250</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the cytochrome c oxidase subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000294">
        <property type="protein sequence ID" value="PJN95817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045187">
        <property type="entry name" value="CcO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001505">
        <property type="entry name" value="Copper_CuA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22888">
        <property type="entry name" value="PTHR22888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00116">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00078">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0186">Copper</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COX2_CUA" evidence="6">
        <location>
            <begin position="4"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12934" checksum="6E30C9F7875901B6" modified="2018-04-25" version="1" fragment="single">RPGGGALRVEAEARQWEWRFAYPEAGLESMNVLHIPAGRDVDVAVTSLDVIHAFWAPRLAGKIDAVPGHVNLVRIHAAEPGLYDGLCAEFCGIGHAAMPFVVEAHPPDLYEARLREAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE66</accession>
    <name>A0A2M9PE66_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Phosphoribulokinase</fullName>
            <ecNumber evidence="3 5">2.7.1.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06155</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>ATP + D-ribulose 5-phosphate = ADP + D-ribulose 1,5-bisphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19365"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57870"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.19"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the phosphoribulokinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.19" evidence="3 5"/>
    <dbReference type="EMBL" id="PHNO01000288">
        <property type="protein sequence ID" value="PJN95836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008974">
        <property type="term" value="F:phosphoribulokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006082">
        <property type="entry name" value="PRK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00478">
        <property type="entry name" value="PHRIBLKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00567">
        <property type="entry name" value="PHOSPHORIBULOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PRK" evidence="6">
        <location>
            <begin position="7"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="308" mass="34765" checksum="4E85525BF79E44CA" modified="2018-04-25" version="1">MSSHFPIISVTGSSGAGTTTVKHTFEQIFRREGIKAVSIEGDAFHRYDRAQMAAELKRRTAEGDMTFSHFSYEANVLDELERVFREYGETGEGRTRHYVHDAKEAEKYGAEPGTFTDWAPFEEGTDLLFYEGLHGAVVNDSVNLAALADLKIGVVPVINLEWIQKIHRDRASRGYSTEAVTDVILRRMHAYVHCICPQFTETDINFQRVPVVDTSDPFIARWIPTADESLVVIRFKNPRGIDFPYLISMIHGSWMSRANSIVIPGNKLDIAMQLILTPLILRLIEVRRRSVGIAVKKRSPGIEANQRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE77</accession>
    <name>A0A2M9PE77_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000284">
        <property type="protein sequence ID" value="PJN95850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008476">
        <property type="term" value="F:protein-tyrosine sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006478">
        <property type="term" value="P:peptidyl-tyrosine sulfation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026634">
        <property type="entry name" value="TPST"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12788">
        <property type="entry name" value="PTHR12788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0325">Glycoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="247" mass="27642" checksum="55D883E65C14E12E" modified="2018-04-25" version="1">MRPPMKTATFVCGCGHSGTTLLANMFASHPQAHVPLRETEVFLQPDPGQAWEALRREAEASGRPHFAEKTPRHVAHLDLIRGLVPGARFVLMVRDGRDVTASFLRRMGEIETGRARWIADNRHVLAARGAPDAMILRYEDLVADPEGALRDVCDFAGLPFAPEMLRFHETPRNWFGVRRLVKGDGTKGRQHRLLRNWQVNQPIFDGRGGWREALSAEDLAPFRTAPLREIMEAFGYGWDEAAGEAGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE7</accession>
    <name>A0A2M9PEE7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_05665</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000259">
        <property type="protein sequence ID" value="PJN95915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="115"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="139"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="211"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="70"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="30456" checksum="3AD560A262BDDA3C" modified="2018-04-25" version="1">MARAVSTRTKVSYTIAAWIVALLIFFPILYTIITSLRTEQEAISGFTLWPSFSLDSYREVQTQQNYFRPFMNSVVLAVGSTVLGLIVGIPAAWAMAFSPTKRTKDVLMWMLSTKMMPAAAVLVPIYLVFIWLGLLDTHIGITIVLMLINLPIIIWMLYTYFREIPGEILEAARMDGANLWGEIWHVLTPMAVPGIASTLLLNVILAWNESFWTILLTTTNAAPLTAFIASFSSPQGLFWAKLSAASVMAIAPILIMGWFSQKQLVRGLTFGAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP9</accession>
    <name>A0A2M9PEP9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05005</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000221">
        <property type="protein sequence ID" value="PJN96025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="305"/>
            <end position="536"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="536" mass="58274" checksum="811E2CD2566FA19D" modified="2018-04-25" version="1">MTAFAQTPQTTFLDQGWSKEIRELYYFTPQGSRIVPFAWFMALEQPDGAGMFADPAYLQRFGLIPADGPHQLNPGGLPIGLALDPNPTANLGPDLGLTCAACHTADVTVEGRRIRIDGGAASFDFDSFYAALADAVTRTFFDPVAFEAFAGRLFPNPTPTGAAELQLQLADFQTKIAGEAVMRRPTLASGFGRVDAMTQIVNALAAVDQSTPHNLRSVNAPTSYPSLWLAPQLEFVQWTPIASNPFARNAGEVLGVFGEATLAGDPADWYASSILLAELQAVESWIEDLNSPKWDETLFGPIDRDLAETGAGLFGGHCLGCHNAPPYRLTDPEQNFFGKSFIEIGRVDYRKIGTDPTYMNAFLARMVRTGPATAPVNGGAAVLPAGFYLLSTTEAILTRLIDEANLTEEQQAALAGYRLRPPLTPGGAPQRYEAPSPFDLKASPLPGIWTSGPYLHNGSVPTVYELLSPVEERRAVFWTGSRELDRKRLGFVSEDAPGRFRFDTSLPGNQRTGHLYPSQGLRPEERDAIIEFLKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV8</accession>
    <name>A0A2M9PEV8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cytochrome P450</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000221">
        <property type="protein sequence ID" value="PJN96024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="SSF48264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="22050" checksum="25A55A54B5500990" modified="2018-04-25" version="1" fragment="single">MARAVPIALVQERFGFADSDPKKLFEWSYWNQIDEFWNYAWDGLPQAQHDDIVVKHEAANAEMATYLGGLAQRRGAEMQAGQIGDDPLSRLMRLALSDALKFDPTRAVVNTGGLLVGAVETTSHAVVNAIAGLLARPEIFAAARRAALADDPSAFDGYVFEAMRFKPAFPYFFRSCEQAVVLSGGTDHARAVEPGTIVFALT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ3</accession>
    <name>A0A2M9PEZ3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Threonine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">(p)ppGpp synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">ATP:GTP 3'-pyrophosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">CNY89_04540</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + H(+) + L-threonyl-tRNA(Thr)</text>
            <dbReference type="Rhea" id="RHEA:24624"/>
            <dbReference type="Rhea" id="RHEA-COMP:9670"/>
            <dbReference type="Rhea" id="RHEA-COMP:9704"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78534"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000196">
        <property type="protein sequence ID" value="PJN96101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004829">
        <property type="term" value="F:threonine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006435">
        <property type="term" value="P:threonyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00771">
        <property type="entry name" value="ThrRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.800">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00184">
        <property type="entry name" value="Thr_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004154">
        <property type="entry name" value="Anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036621">
        <property type="entry name" value="Anticodon-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002320">
        <property type="entry name" value="Thr-tRNA-ligase_IIa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018163">
        <property type="entry name" value="Thr/Ala-tRNA-synth_IIc_edit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033728">
        <property type="entry name" value="ThrRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012947">
        <property type="entry name" value="tRNA_SAD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11451">
        <property type="entry name" value="PTHR11451"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03129">
        <property type="entry name" value="HGTP_anticodon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07973">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01047">
        <property type="entry name" value="TRNASYNTHTHR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00863">
        <property type="entry name" value="tRNA_SAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55186">
        <property type="entry name" value="SSF55186"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00418">
        <property type="entry name" value="thrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 17" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0820">tRNA-binding</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="TGS" evidence="16">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="15">
        <location>
            <begin position="246"/>
            <end position="543"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="603"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00029754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN96101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="603" mass="68510" checksum="FC77A6A4D7911E40" modified="2018-04-25" version="1" fragment="single">MSTITLRLPDGAERSYPAGITGAEVAADISKSLGKAALAWVVDGRLADLSLALDGDASVAIVTSKDEPALELIRHDCAHIMARAVQELWPDVKVTIGPVIENGWYYDFDRDEPFTPEDLATIETRMRQIIAARDPVRTEVWDRDRAIRHYEALNEPFKVELIEGIPGVEPIRMYWHGPWQDLCRGPHLANTGQVPADGFKLMSIAGAYWRGDSSRKQLQRIYGVAFRTKADLEAHLHRLEEAAKRDHRRLGKEMKLFHLQEEAPGMVFWHPDGWTVYRTLEDYMRRRLRAAGYKEIRTPQVVDRVLWERSGHWETYQHNMFIVEVEEEHAKEKRVNALKPMNCPCHVQVYNQGLKSYRDLPLRLAEFGACHRYEPSGSMHGLMRVRGFTQDDAHIFCTEGQIEAECAAFIELLSSVYADLDFQSFDIKLSTRPEVRIGSDEAWDKVEAALENAIRKVGRAYEIDPGEGAFYGPKLDFKLTDAIGREWQCGTFQVDPNLPDRLDAEYVGEDGARHRPYMLHRAILGSFERFIGVLIEHYAGRFPLWLAPRQVVVAPIVSDANAYAEEAVAALTAAGLRAEADLRNEKINYKVREHSLAKVPVIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF40</accession>
    <name>A0A2M9PF40_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase family 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000195">
        <property type="protein sequence ID" value="PJN96104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="18"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9184" checksum="AAA30547D50F7951" modified="2018-04-25" version="1" fragment="single">MLAFRNITFALEGRRLFDDTSALIPTGHKVGFVGRNGTGKTTLFRLIRGELSLDGGEIETPRRARIGGVAQEAPATQDSLLDTVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB7</accession>
    <name>A0A2M9PFB7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_04070</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UPF0718 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000173">
        <property type="protein sequence ID" value="PJN96184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005524">
        <property type="entry name" value="DUF318"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03773">
        <property type="entry name" value="ArsP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="79"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="175"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="205"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="234"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="31712" checksum="3CE6A6572AABEB75" modified="2018-04-25" version="1" fragment="single">LGGSVQFFVYDVVKIFILLSTLIFAISWVQSYFPPERTRRILGGRTGLGANTLAALLGTITPFCSCSSIPLFIGFTAAGLPLAITFSFLISSPLVDLASVILLASIFSWPIALAYVAVGLVIAILGGTLIGRAGMEGQVEDFVRNLPVQDHEHLPTRPERLAFAADQVVEVVHRVWLYVLIGVGVGALIHNWIPEAAITAILGQDNWWSVPVATLVGVPMYGDIFGTLPIAEALVGKGVGLGTVLAFMMAVTALSLPSLIMLRRVVKPRLLTLFVAVVTGGILGIGYVFNALTPWFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC1</accession>
    <name>A0A2M9PFC1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03785</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000160">
        <property type="protein sequence ID" value="PJN96231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="31799" checksum="A6280A7FB0D5AACA" modified="2018-04-25" version="1">MPRNLDLTALRSFVTVAESGGVTRAALQLNLTQSAVSMQLKRLEESVGQPLLDRSGRGVALTPQGEQLAGFARRMLALNDEAWGHLTNQAYEGEIALGVPHDIIYPHIPKALHRFACEFPRVQVKLHSSFTSELKLQMTRGEMDVILTTEAGVDTGGMVLDRQPLTWIGAQGGAVWRTRPVRFASVSRCIFKRPAIDALERAGLPWALTVDAQSFSAVDASVSADLAVCVQLESAVPRLCEVIRHNGALPELPDYLVNMYVTDGPRASLAERLAEMIRESYGRGEQKIAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE8</accession>
    <name>A0A2M9PFE8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ATP-dependent Clp protease ATP-binding subunit ClpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">clpA</name>
        <name evidence="8" type="ORF">CNY89_03595</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000149">
        <property type="protein sequence ID" value="PJN96261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="SSF81923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51903">
        <property type="entry name" value="CLP_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="Clp R" evidence="7">
        <location>
            <begin position="1"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="147"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="383"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="383" mass="42009" checksum="74588F44CF2D8937" modified="2018-04-25" version="1" fragment="single">MPSFSSSLEAAIHNALGHANKRKHELATLEHLLLALMDEPDAARVMKACGVDLDKLRKNIVAFLDEELDALISDVDGSEAAPTTGFQRVIQRAAIHVQSSGRSEVTGANVLVAIFAERESHAAYFLQEQDMTRYDAVNYISHGVAKDPSYGESRPVKGAESTPDPKPQTASAKDAEETALQKYCVDLNEKARKGDVDPLIGRDLEVERCIQVLCRRRKNNPLLVGDPGVGKTAIAEGLARKIVDGETPGVLADTTIFSLDMGALLAGTRYRGDFEERLKAVMKELENHPNAILFIDEIHTVIGAGATSGGAMDASNLLKPALQSGSLRCMGSTTYKEYRQHFEKDRALARRFQKIDVNEPTTEDAFKILKGLKPYFEDHHDVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF6</accession>
    <name>A0A2M9PFF6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000147">
        <property type="protein sequence ID" value="PJN96271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002560">
        <property type="entry name" value="Transposase_DDE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01610">
        <property type="entry name" value="DDE_Tnp_ISL3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_ISL3" evidence="1">
        <location>
            <begin position="54"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_ISL3" evidence="1">
        <location>
            <begin position="232"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="370" mass="41056" checksum="ED1FA277CB86831B" modified="2018-04-25" version="1">MGAIVLAIGIVNIPLFLRLMRSEARRLGALPFVESARLSGGGDLYVLRAHILADRPEIEIVSRDRGGGYGQAVVKALPEAIQVADRWHLMENASQAFRDAVRRSMTPIRGALGAGMVDPALLTCAERLQYDGFLRRKEANCTIQAVANQGVPIKQIVLRTGRSRQTVRRILRGERDDVFRGRISSLEPWLVQFDDAWTAGTRNGAELWRRLRDAGFGGGLRVVTEWATLRRRAEAASESGPRKCPSARKIAVLLTERRDRLSRQDAITVAIIEKAAPPIAIARRLLDRFHAMIRRRAPTELAGWLDEAACGPLTAFARGLRKDQPAVAAALSLPWSNGQTEEHITRLKLLKRHMFGRAKPDLLRARLLGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM5</accession>
    <name>A0A2M9PFM5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000121">
        <property type="protein sequence ID" value="PJN96353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06533">
        <property type="entry name" value="Glyco_transf_WecG_TagA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004629">
        <property type="entry name" value="WecG_TagA_CpsF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34136">
        <property type="entry name" value="PTHR34136"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03808">
        <property type="entry name" value="Glyco_tran_WecG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00696">
        <property type="entry name" value="wecG_tagA_cpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="247" mass="26910" checksum="48071DEDDA84AA16" modified="2018-04-25" version="1">MVEDCMAARLGRVLKPKVLIASNGSVIARYHSDAQFRRNVDQADLVDADGMPLVLASRFFCGAPLVERIATTDFIEDAAAAAAKAGLRFYFLGGKPGVAQKAARKLTERYPGLQIVGTRHGYFSASEEGAIIADILAKKADVLWLGLGSPHQEAFAIRLRDELPGVGWIRTCGGLFDHVSGAVPRATKRMQSMGLEWLHRLLVEPRRLAWRYITTNPVACFHLLTKTFEWAEPSVGAPVDALGILVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN3</accession>
    <name>A0A2M9PFN3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF718 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000126">
        <property type="protein sequence ID" value="PJN96338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="5"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11586" checksum="78E3B264B1CD4AD3" modified="2018-04-25" version="1" fragment="single">MTAMNIVRFRVKPGRAADFIAHHRTVGRETFDGFRRFTLVQTGSDAFCVVGEWDSLDKLAAGRPAMIAVLDGMRDMLVDLGPGLGVTDPVSGEVVLDLEGPAARSGEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP7</accession>
    <name>A0A2M9PFP7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_02985</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000117">
        <property type="protein sequence ID" value="PJN96365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004682">
        <property type="entry name" value="TRAP_DctP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006470">
        <property type="entry name" value="DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00787">
        <property type="entry name" value="dctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014955156" evidence="6">
        <location>
            <begin position="23"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="322" mass="35477" checksum="01061671867E6038" modified="2018-04-25" version="1">MHRTPMLAVLAGLVLSATGAAAQTKLNWAHVYEVSEPFHTESVWAAEEIKKRTDGRYEISVFPASQLGKEADINQGLKLGTVDMIISGSSFAAREYQPIGVTYYPYIFDSPEHLLAYTRSDVFKRLAQGYEEASGNHITAVTYYGTRQTTANKEITKCSDLEGVKMRVPDVPAYLAMPQSCGANTAPIAFAEVYLALQNGTVEAQENPLTTIDAKKFYEVQTNIALTGHIVDHLNTVVSASRWASLSDEDKAIFTEVTQEAAERATKIIQEREAALVQTFKDRGINVTEVDKASFEEAVLKNKPVESLGYNQADWDAIKALQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT8</accession>
    <name>A0A2M9PFT8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10260" checksum="BF70870AD6D43B7B" modified="2018-04-25" version="1">MRRAAKVDANQAAIVNALRRAGASVQPLHAVGAGCPDLLVGYRGQNLMVEVKDGGKPPSARKLTPDQADWHDAWRGQVIVVKDVDQALAAIGVGVGQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU4</accession>
    <name>A0A2M9PFU4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02840</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000110">
        <property type="protein sequence ID" value="PJN96392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014470">
        <property type="entry name" value="UCP01500"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10028">
        <property type="entry name" value="DUF2270"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="66"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="204"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="238"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="249"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="34342" checksum="1D200B8CD3EF0E51" modified="2018-04-25" version="1">MTIHPALPSEPGGRRDFDPAELGALAHLYRGEVYRSTIWRTRLDQTTNWAVVTTGLALSLTFAGPYASPLPLILVGLLVVVFLLFEARRYRYFNVWRARCRLMERDLYGPLLRGQGVHMDGRWNTLLAQDYVTPRFHISQIRSIGRRLRKNYRGCPAGERHRHDPGAAHHRAHQCPGRHRFALHHRPGRRLQRRGALHLPKQLQQGLDLRPNPQRGPYPAGDLPGYLCDEFAQRRIRRAGDHRDGNGRVRLPRHGRRDHRRRGWPRPIWRARHRPLVHQGPQRLHGSPLPRVPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG63</accession>
    <name>A0A2M9PG63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NYN domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000077">
        <property type="protein sequence ID" value="PJN96509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021139">
        <property type="entry name" value="NYN_MARF1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01936">
        <property type="entry name" value="NYN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NYN" evidence="1">
        <location>
            <begin position="15"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="23603" checksum="792C375314F81B9A" modified="2018-04-25" version="1">MVNPPPSPAPVAILRVRIFVDFWNFTLSMKAAKAGFLPDWTKIGRLLTSEAAKQVDPTMGHSFEAMHVYGSFDPASESDKKLRKWLEGWLDKQPGVHVSSVPRQKKKAPPKCPACLTDVPTCGSCGADMRGTEEKGVDTRIVTDMMSHAWADGYNTALLISADRDFVPVAEELQKRGVKVIHGRFGTKGMDLSKKCWGSIEISALMPQFERRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG90</accession>
    <name>A0A2M9PG90_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AsnC_trans_reg domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000068">
        <property type="protein sequence ID" value="PJN96551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="11"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10323" checksum="8F5CFA4D38039DA0" modified="2018-04-25" version="1">MLGFSVTVFCGVRLAARGRLDLEAFERAAQAIPEVQVIQHVLGVYDYRLRVIARDLADFERILRRRIMTLPGVGGVESNVLLSEEKRAEPVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG91</accession>
    <name>A0A2M9PG91_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glycos_transf_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000069">
        <property type="protein sequence ID" value="PJN96546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="91"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="32722" checksum="0D9DE077C6BB3D31" modified="2018-04-25" version="1">MSSARRVSAPGNSFNRRVTCQFADSFEFNPLLRFAKFGRLAKLLNDPRIDWVSNHGANACRSLTRLGVDPGKVIPWDWPYQRNPAQTPPREKPPGDAATLLYVGTVQTKKGVGDAIAAVARLRTQGRPVRLKVVGGGQIDRFRAMAASLPGGDGVEFLGIVPNSRVFDLMKEVDAVIVPSRHDYPEGLPLTIYEALCARTPIIASDHPMFRGHLEDRKTAVTFRAKDVRGLAASVEALLDEPDLYFRLSHASQATWEGMQNPVKWGDVLYRWISDTVEDRAWLHAHVLDMAGKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA4</accession>
    <name>A0A2M9PGA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">5-(Carboxyamino)imidazole ribonucleotide synthase</fullName>
            <ecNumber evidence="4">4.1.1.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02125</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Purine metabolism.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.21" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000078">
        <property type="protein sequence ID" value="PJN96504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00139"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043727">
        <property type="term" value="F:5-amino-4-imidazole carboxylate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004638">
        <property type="term" value="F:phosphoribosylaminoimidazole carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003135">
        <property type="entry name" value="ATP-grasp_carboxylate-amine"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040686">
        <property type="entry name" value="PurK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02222">
        <property type="entry name" value="ATP-grasp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17769">
        <property type="entry name" value="PurK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="30"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00025704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16859" checksum="0AC3324293EB82E6" modified="2018-04-25" version="1" fragment="single">AARGLDGAVAAFDPGENVHRDGILHTTTVPARLSPGLAQDAVLMAGRILNALDYVGVIGVELFVTPRGLVVNEIAPRVHNSGHWTQDACLIDQFEQHMRAVCGWPLGDGARHSDAVMTNLIGDEVLAAPAMTGVAVHLYGKSEARAGRKMGHVTRISPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ0</accession>
    <name>A0A2M9PGJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Copper-translocating P-type ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_01320</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000045">
        <property type="protein sequence ID" value="PJN96646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.620.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045800">
        <property type="entry name" value="HMBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012348">
        <property type="entry name" value="RNR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011017">
        <property type="entry name" value="TRASH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007029">
        <property type="entry name" value="YHS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19335">
        <property type="entry name" value="HMBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04945">
        <property type="entry name" value="YHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00746">
        <property type="entry name" value="TRASH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="187"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="379"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="407"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="723"/>
            <end position="742"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="748"/>
            <end position="770"/>
        </location>
    </feature>
    <feature type="domain" description="TRASH" evidence="8">
        <location>
            <begin position="21"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="777" mass="81685" checksum="0F843477944B2C78" modified="2018-04-25" version="1">MEHDHQHAAPDIPAGTETAKDPVCGMTVAVKTDGRHAAFQGETFHFCSEKCQTKFKADPWFYASGRAAGQKKAAPANVQYTCPMHPEIVRDAPGSCPICGMALEPMVPSDEPSEELTDFTRRMWISAAAAVPLIILTMGELVALPVRDWIGHQTASYLEFVLATPIILWAALPFFRRGWDSLVNRSPNMWTLISIGVAAAYLYSIVATFLPGIFPEQYRMGHGVGTYFEAAVVIVALVFVGQVLELRARERTGDAIRALLDLAPKTARRILPDGTEYDAPLENIMEGDRLRVRPGDAVPVDGTVIEGRSSLDESMLTGESMPVEKGPGDAVTGATINKNGSLVIEAGKVGSDTVLAQIVAMVSNARRSRAPIQGLADRVSAVFVPTVVAIAIIAFVVWMIFGPEPALVFAMASAVSVLIIACPCALGLATPISITTAAGRGAQAGVLIKDAEALERMAGVDTLIVDKTGTLTMGKPKLTDVVALGDITETDLLSLAAALQRGSEHPLAEAIVEGAEAKGAPRQEATDFDAVTGKGVQGIVGERAVALGNAAMMREMGLDTAQAEAKADTLRAEGKTAMFVALDGALVGIVAVADPIKDSTAQAIRELHAQGLRVIMATGDNERTAQAVAGKLDIDEVRAGILPEAKKDLIDQLRRDGHKIAMAGDGVNDAPALAAADVGIAMGTGADVAMESAGITLLGGDLMGIVRARKLARATLRNIKQNLFFAFAYNALGVPIAAGLLYPVTGLLLSPMIAAAAMSLSSVSVITNALRLRRVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK1</accession>
    <name>A0A2M9PGK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000057">
        <property type="protein sequence ID" value="PJN96604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014955161" evidence="1">
        <location>
            <begin position="17"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="4725" checksum="95062C86CED7A22F" modified="2018-04-25" version="1" fragment="single">MSLAAFLAVALMSLFAAVSPGPAVLMAARTGVTEGMRTGAFLAVGIGAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU4</accession>
    <name>A0A2M9PGU4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glucose-1-phosphate adenylyltransferase</fullName>
            <ecNumber evidence="9">2.7.7.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">ADP-glucose pyrophosphorylase</fullName>
            <shortName evidence="9">ADPGlc PPase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">ADP-glucose synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">glgC</name>
        <name evidence="12" type="ORF">CNY89_00565</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>alpha-D-glucose 1-phosphate + ATP + H(+) = ADP-alpha-D-glucose + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:12120"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57498"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="2.7.7.27"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9 10">Glycan biosynthesis; glycogen biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.27" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000017">
        <property type="protein sequence ID" value="PJN96775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00164"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008878">
        <property type="term" value="F:glucose-1-phosphate adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00624">
        <property type="entry name" value="GlgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011831">
        <property type="entry name" value="ADP-Glc_PPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005836">
        <property type="entry name" value="ADP_Glu_pyroP_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023049">
        <property type="entry name" value="GlgC_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43523">
        <property type="entry name" value="PTHR43523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02091">
        <property type="entry name" value="glgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00808">
        <property type="entry name" value="ADP_GLC_PYROPHOSPH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00809">
        <property type="entry name" value="ADP_GLC_PYROPHOSPH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00810">
        <property type="entry name" value="ADP_GLC_PYROPHOSPH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="7 9 10" id="KW-0320">Glycogen biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0321">Glycogen metabolism</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 9 12" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 9 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="11">
        <location>
            <begin position="29"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="region of interest" description="Alpha-D-glucose 1-phosphate binding" evidence="9">
        <location>
            <begin position="200"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="185"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>alpha-D-glucose 1-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
        </ligand>
    </feature>
    <feature type="site" description="Could play a key role in the communication between the regulatory and the substrate sites" evidence="9">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <feature type="site" description="Could play a key role in the communication between the regulatory and the substrate sites" evidence="9">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="433" mass="48141" checksum="19D2A01DE817F979" modified="2018-04-25" version="1">MNPGNNKDHQGGLNLDSRSQPLARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKTRIIDFALSNALNSGIRRMGVATQYKAHSLIRHLQRGWNFLRPERNESFDILPASQRVSETEWYAGTADAVFQNIDIIESYGPEYMVILAGDHIYKMDYELMLRQHVDSKADVTVGCLEVPRMEATGFGVMHVDEEDTITAFIEKPADPPGIPGSPDMALASMGIYVFHTKFLMDLLRRDAAQPGSSRDFGKDLIPYIVENGKAVAHRFSASCVRSNKEGEAYWRDVGTVDAYWAANIDLTDVIPELDLYDTSWPIWTYSELTPPAKFVHDEPGRRGEAISSLVSGNCIVSGASLRRTLLFTGVRVNSYSNLEEAVILPDCEIGRKVRLKKVVLDRGVIVPEGLVVGEDPVLDAQRFRRTEAGVCLVTQSMIDRLEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH74</accession>
    <name>A0A2M9PH74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6496" checksum="063B41A9006442AA" modified="2018-04-25" version="1">MTDDDPTIAKADAILALCARYRIPVAGVYVSIRDGNQEITVSVETEPVEPTEPHPERMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P499</accession>
    <name>A0A2M9P499_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004822">
        <property type="protein sequence ID" value="PJN92343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7776" checksum="15094D4D7384784C" modified="2018-04-25" version="1" fragment="single">VRIRAKRGHQVAAVALARKLTVLCWHLLTREEDYLWARPALVAKKTRDMELRAGLPQKKGNRRGPAYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B6</accession>
    <name>A0A2M9P4B6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004701">
        <property type="protein sequence ID" value="PJN92386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7985" checksum="B7E1A1B74BF87D72" modified="2018-04-25" version="1" fragment="single">PDTPERIANLSEQSGGLAAFSLFGSRRRVNRNSKDVAKLFRKRLSEEDIRRISDRAGDVWPDFYTEAEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B8</accession>
    <name>A0A2M9P4B8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004751">
        <property type="protein sequence ID" value="PJN92369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7272" checksum="E2A62007F73CA5C6" modified="2018-04-25" version="1" fragment="single">LADAAARQRPADQDPWVSLAVGTDRMALGIDVGHAHQLADAAARQRPADQDPWVSLAVGTDRMALGIDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J3</accession>
    <name>A0A2M9P4J3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Anticodon_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_29600</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004488">
        <property type="protein sequence ID" value="PJN92450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004812">
        <property type="term" value="F:aminoacyl-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006418">
        <property type="term" value="P:tRNA aminoacylation for protein translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Anticodon_1" evidence="6">
        <location>
            <begin position="32"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7901" checksum="E9AD91CE8D84DC79" modified="2018-04-25" version="1" fragment="single">MTPHLAEEIWAALGGEGLVAQAPWPAADPAYLALRTMAQLTAPMTPHLAEEIWAALGGEGLVAQAPWPAADPAYLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T7</accession>
    <name>A0A2M9P4T7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004205">
        <property type="protein sequence ID" value="PJN92539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5603" checksum="ED79AC72AAC876EE" modified="2018-04-25" version="1" fragment="single">FSTLKSWGLKLAKTSGFKKARIAVARKMAVILARHVEDKTPFRWSQEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P544</accession>
    <name>A0A2M9P544_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003861">
        <property type="protein sequence ID" value="PJN92649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="8729" checksum="138A84CA2E56DB3E" modified="2018-04-25" version="1" fragment="single">FLLLGAGYGRRGRGGGGGGGGGEGPSGARAMVRVIPSHDHLADHPDLGKVISTTSKSRSFLLLGAGYGRRGRGGGGGGGGGEGPSGARAMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P562</accession>
    <name>A0A2M9P562_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">(S)-ureidoglycine aminohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003819">
        <property type="protein sequence ID" value="PJN92669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10786" checksum="8FB19F161244C096" modified="2018-04-25" version="1" fragment="single">PGMTWSQRNHSGSRVVFHWIRKAYEPVEDLGLPQPLVVNEADVKNMAMPDTLGRWTTTRFFDHSDMRLDMHVTIVNLEPGAEIPFMETHVMEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A4</accession>
    <name>A0A2M9P5A4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003664">
        <property type="protein sequence ID" value="PJN92726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="3835" checksum="4602A364EA0CF1C8" modified="2018-04-25" version="1" fragment="single">AGSLLVDQLSLSLLTHFAETYGGMRAGKAEETGRLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D1</accession>
    <name>A0A2M9P5D1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003576">
        <property type="protein sequence ID" value="PJN92756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8369" checksum="E0788221E3815C4D" modified="2018-04-25" version="1" fragment="single">ARPALVAKKTRDMELRAGLPQKKGNRRGPAYAYNVKELRAQESELARHAEKTYEQFVATLEEVEAYGAPRRGKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F4</accession>
    <name>A0A2M9P5F4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CopG family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003511">
        <property type="protein sequence ID" value="PJN92776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4424" checksum="3B47C363B22536CB" modified="2018-04-25" version="1" fragment="single">RSLDRPLSQGERNGIPLLSSRPGSPPITLDLVNRLRDETP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H4</accession>
    <name>A0A2M9P5H4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003519">
        <property type="protein sequence ID" value="PJN92773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="9"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4586" checksum="1C17D80651B89A21" modified="2018-04-25" version="1" fragment="single">MMASPEENWLSLEETATYIGVGKTVLYGMAREGTIPARKVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P5</accession>
    <name>A0A2M9P5P5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003305">
        <property type="protein sequence ID" value="PJN92840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5711" checksum="49E37168E4EBDB7A" modified="2018-04-25" version="1" fragment="single">MKLRDKQHREIAKFVISGRKSGAEMARLYAVSEPTVSRIVAEHRQQGDQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P7</accession>
    <name>A0A2M9P5P7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Divalent-cation tolerance protein CutA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25970</name>
        <name evidence="2" type="ORF">CNY89_28590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CutA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004111">
        <property type="protein sequence ID" value="PJN92566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003281">
        <property type="protein sequence ID" value="PJN92849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010038">
        <property type="term" value="P:response to metal ion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004323">
        <property type="entry name" value="Ion_tolerance_CutA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03091">
        <property type="entry name" value="CutA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6681" checksum="1ED477C06571B887" modified="2018-04-25" version="1" fragment="single">MTPLILIEISCPDAETATRIGDALVDRRLAACVHVGAPFRSRYRWRGAVEEAEEVPLSAVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q0</accession>
    <name>A0A2M9P5Q0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_25795</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003224">
        <property type="protein sequence ID" value="PJN92867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN92867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12558" checksum="1F5D8DF61EFD0943" modified="2018-04-25" version="1" fragment="single">KKEGVYRDLYHFWSKVFAVNFAMGVVSGLVMAYQFGTNWSYFSSFAGGVTGPLLAYEVLTAFFLEAGFLGVMLFGWNKVGPGLHFFATCMVALGTLISTTWILASNSWMQTPQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5X3</accession>
    <name>A0A2M9P5X3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_25355</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003096">
        <property type="protein sequence ID" value="PJN92920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13066" checksum="506C8B6710888D93" modified="2018-04-25" version="1" fragment="single">DGKREVLGVATGPSEAETFWTEFLRSLADRGLRGVKLVIADDHKGLRAAARRVFDATHQRCRVHWLRNALAHAPAKQRAAVAAMLKTIFAQETRTEAIDQWGIVADALREKQPKLGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y6</accession>
    <name>A0A2M9P5Y6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002960">
        <property type="protein sequence ID" value="PJN92971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010290">
        <property type="entry name" value="TM_effector"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05977">
        <property type="entry name" value="MFS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="14572" checksum="DC7C52DBC1227749" modified="2018-04-25" version="1" fragment="single">PLDRFREPKLGLDLAPRSGPVAITVEYRIRETDVPEFLGAMADRQRMRQRDGARLWTLMRDLEDPEIWVEFYQTATWIDYLRHHERSTRADATQAMIFAWMPWIFMFMMGGFASGLVVYWIAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P629</accession>
    <name>A0A2M9P629_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002919">
        <property type="protein sequence ID" value="PJN92992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="14312" checksum="42F9CDB9DD3B9732" modified="2018-04-25" version="1" fragment="single">MSGLFSLQKRKRLKPIEYRSPDGEAWVRVQAIPRLWGWLQSGDADILIWGASTLNRMKQQGINNLPRTLRTTPYELLRAIKRNTGGRDYQELQAALLRLQTTSITTSIRATKRRQKAGFNWLDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P637</accession>
    <name>A0A2M9P637_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002905">
        <property type="protein sequence ID" value="PJN92997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="5992" checksum="237F4AB6F320D65B" modified="2018-04-25" version="1" fragment="single">QIKVLDRRLMAVARANPTARLFMTVPGVGVITALSVASSFDDASRFKRSSSAGAILA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6C3</accession>
    <name>A0A2M9P6C3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002580">
        <property type="protein sequence ID" value="PJN93111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4933" checksum="A39AEBCB5BC1E6F5" modified="2018-04-25" version="1" fragment="single">MAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G2</accession>
    <name>A0A2M9P6G2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23750</name>
        <name evidence="1" type="ORF">CNY89_28585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004110">
        <property type="protein sequence ID" value="PJN92567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002624">
        <property type="protein sequence ID" value="PJN93100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8866" checksum="10C9B0D6799C3176" modified="2018-04-25" version="1" fragment="single">MYSPSGYVDAIMPIGGTTASDGADPIGQWTFRLAQAAIESDPVYRETGGNFYDLPAAEHPKQGLQFLWSILQQTGFTFAHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M9</accession>
    <name>A0A2M9P6M9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002432">
        <property type="protein sequence ID" value="PJN93170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="8147" checksum="59C5962E33E8D5A5" modified="2018-04-25" version="1" fragment="single">MNTKRRLVSNYVRTFIEKEGGSIRFRAVRDERGRLYWEVLGVYPDGTEEAVTSSNTGQYKVLRTADAVVAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R9</accession>
    <name>A0A2M9P6R9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_22695</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TrbI/VirB10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002350">
        <property type="protein sequence ID" value="PJN93208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16429">
        <property type="entry name" value="VirB10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005498">
        <property type="entry name" value="T4SS_VirB10/TraB/TrbI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042217">
        <property type="entry name" value="T4SS_VirB10/TrbI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03743">
        <property type="entry name" value="TrbI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="15815" checksum="E28C9043BA522C2C" modified="2018-04-25" version="1" fragment="single">QTHKTVRAEQIADPSRTIVQGTILEGVLETAINTDLPGAIRAVLTEDVVSYDGSTTLLPRGTRLIGSYSSNVKIAQRRALIAWNRAVTPAGTSVALGGIGADALGRSGQTGHVDTHFWERFGSAALISIFALGPQFAIDDETDEDVADAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W7</accession>
    <name>A0A2M9P6W7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002213">
        <property type="protein sequence ID" value="PJN93273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7803" checksum="A070A1F2DBF2401F" modified="2018-04-25" version="1" fragment="single">MGRRAGLQRFLLAGRGGCYKALTKADMKLDVAADPLPMKRAVAFCKDIRSSKLIRDEFAAVVNEFLGTDDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C1</accession>
    <name>A0A2M9P7C1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001880">
        <property type="protein sequence ID" value="PJN93451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="11775" checksum="52759B9259788410" modified="2018-04-25" version="1" fragment="single">SGAAIGLFMAFGLYGYVSGGMPARFGANPIRTAYLDSAKASPKRDLCHSYPGHMVAPADACQFFVEGGDVAVFGDSHAITLSMGMARVLEPEGTRNLAVLREPLCALIPAGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H5</accession>
    <name>A0A2M9P7H5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001859">
        <property type="protein sequence ID" value="PJN93468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19831" checksum="C831DBC83C6FEC79" modified="2018-04-25" version="1" fragment="single">HKDVLSQAGCLIAMQLTAAQDRAAIGAWIEGQAQRPAVLHKDVLSQAGCLIAMQLTAAQDRAAIGAWIEGQADRAEAKALLASLPQLRTGEGWLWWPHAGPPVQQRFPRIRTLDTGSTPAHGEEASDTPLSDAGLDLEALRGTPGRRSQQRFRGSEPSTPAARRLMARKPPTHRSPTQASTSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L8</accession>
    <name>A0A2M9P7L8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">L-rhamnose mutarotase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19965</name>
        <name evidence="4" type="ORF">CNY89_20670</name>
        <name evidence="3" type="ORF">CNY89_20675</name>
        <name evidence="2" type="ORF">CNY89_25370</name>
        <name evidence="1" type="ORF">CNY89_25410</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003110">
        <property type="protein sequence ID" value="PJN92913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003099">
        <property type="protein sequence ID" value="PJN92918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001873">
        <property type="protein sequence ID" value="PJN93455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001871">
        <property type="protein sequence ID" value="PJN93456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001733">
        <property type="protein sequence ID" value="PJN93554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016857">
        <property type="term" value="F:racemase and epimerase activity, acting on carbohydrates and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008000">
        <property type="entry name" value="Rham/fucose_mutarotase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05336">
        <property type="entry name" value="rhaM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10883" checksum="A14C1B1480C5D600" modified="2018-04-25" version="1" fragment="single">MRRMGMVIGIRPEHIAEYRRLHAAVWPEVLRRIAQSHIRNYTIFLREPENLLFGYWEYHGTDFEADAAEIAADPVTQDWWRLCGPCQDPLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S9</accession>
    <name>A0A2M9P7S9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001718">
        <property type="protein sequence ID" value="PJN93560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17490" checksum="CE724084081662C3" modified="2018-04-25" version="1" fragment="single">ARSVAPAAVAFGLTALAYGLAARLGWPNLLLSTAVNLIGAWIVIRLLTRFIRNDFWSRVAAFLAFGVATLNILDLLGPTIVWLDQLNLRLGATRVSALDLLRVIVELALLLWLAAFAARLLESYHVLDCSPHYSVNGDLPAHSLASPSGLGAVAPSLGISDLPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T5</accession>
    <name>A0A2M9P7T5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19800</name>
        <name evidence="1" type="ORF">CNY89_24115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002732">
        <property type="protein sequence ID" value="PJN93060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001697">
        <property type="protein sequence ID" value="PJN93578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13126" checksum="25BD3F54EDF9052A" modified="2018-04-25" version="1">MKTVREGENGWTCMKPGTNPMCADAGGLEWMHALMSKGETPHKLGFIYMLLGDGGASNIDPFAAEETPDNNWIVSGPHVMIVGTEAKSLLEGYPRAAVADPAKPYVMWAGTPYEHLMLSMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W5</accession>
    <name>A0A2M9P7W5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19525</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001636">
        <property type="protein sequence ID" value="PJN93619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="16999" checksum="252D96E29F5F1766" modified="2018-04-25" version="1" fragment="single">LHGAGEAERTALRRRLGFIFQSHNLHESLSALQNVIMGVQVHPGVPDDIAREAAARALGLVGLCDRLDYLPANLSGGQKQRVAVARALVGNPSMVLADEPTAALDKDSAADVIDLLKRLGAERGTTTLLVTHDNRILDRADRILTLEDGRIVSDSQRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X3</accession>
    <name>A0A2M9P7X3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001593">
        <property type="protein sequence ID" value="PJN93656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007332">
        <property type="entry name" value="DUF411"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04214">
        <property type="entry name" value="DUF411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014618240" evidence="1">
        <location>
            <begin position="28"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16644" checksum="55AAEAFC78661CBB" modified="2018-04-25" version="1">MQLILSRRGFVLGACAASIAGAVPAIADAGSALHVLKDPNCGCCSAWVEILQADGFEVTVEESMGTALARYKLDNGIPQEMASCHTGRIAGYMIEGHVPPADIRRLLEERPDAIGLAVPGMPYGSPGMGPETEREAYEVFLIRRDGSTEVFSSYDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P853</accession>
    <name>A0A2M9P853_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Molecular chaperone DnaJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001515">
        <property type="protein sequence ID" value="PJN93724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="2">
        <location>
            <begin position="156"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="131"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="24307" checksum="2582A31384E2104A" modified="2018-04-25" version="1" fragment="single">MRRPSPFDFDISASADKKRRARSRNGGAPESGRVCDKPGCGKPGKFRAPRSAEQLDSFWWFCLDHVREYNLKWNFFQDQSDDDLERQFAADRVWERPTSPFSETVQRRSPHAEGRAWARFGFDDPMDLLGEKATMNPGGDRPGPRPQRRLPPTERKALEILDAQDTQTKTEIRQIYKAMVKDLHPDMNGGKRDDEARLTEVVWAWEQIKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A5</accession>
    <name>A0A2M9P8A5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001468">
        <property type="protein sequence ID" value="PJN93771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="207" mass="22184" checksum="34E6B410F5712F2A" modified="2018-04-25" version="1">MVFPWRTGGTGNAFTITPDPPLTAYGSSGFFLISPDRSAAAGAATLNVNGLGECELRARDSNGSLRDLFPGEVRANRTLGVSFDGGRFFIEFGQWPIRITSGNDTIIRHSDGTLVVRKIVTLNLATTAFQDFAFPTGATFLGDSITASLSCNENPSTPNTDTSGFLMALGNLALIAHALPTPRWRVSVRDTTSATISMCLRAEGRWY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G7</accession>
    <name>A0A2M9P8G7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001413">
        <property type="protein sequence ID" value="PJN93836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942213" evidence="1">
        <location>
            <begin position="20"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10465" checksum="674C6A149A10727A" modified="2018-04-25" version="1" fragment="single">MRTLGFVLAALAAPVAAVAAQEVVNDYPTEARAEYVFACMQTNGATRDALSRCSCSIDAIATILPYDAYVSAETVLSMRHGGGGERMAMFRGTPTTTAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P7</accession>
    <name>A0A2M9P8P7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001355">
        <property type="protein sequence ID" value="PJN93907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="11147" checksum="D8787573144EED90" modified="2018-04-25" version="1">MTAMLDTTLEEDPVEEVAPDIVPGLDAEVVLETPAGGDPVEGVPEASDAARVFDVALLGAGESAPVEQVGHPGVIHGEIGADRIFGGDLGETICAGLGEDDVDGGAGSRRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U0</accession>
    <name>A0A2M9P8U0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Galactonate dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17340</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UxaA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001309">
        <property type="protein sequence ID" value="PJN93956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007392">
        <property type="entry name" value="Gal/Altron_deHydtase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04295">
        <property type="entry name" value="GD_AH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GD_AH_C" evidence="3">
        <location>
            <begin position="3"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="304" mass="32398" checksum="CFF2DC05BEDE90F4" modified="2018-04-25" version="1" fragment="single">YATLFRTLQGYARNPNFAGILLVGLGCEVMQIPDLIGAARMRADGNFRYMTIQQTGGTRATVAKGVEMLEEMAAKAEAARREPIPVSELVIGMQCGGSDGYSGITANPALGVASDLLVSHGGTTILSETSEVYGAEHLLTRRAVSREVGEKLIARIRWWEDYTARNKGEMNNNPSPGNKRGGLTTILEKSLGAAAKGGSAPMSDVLLYAEPLREKGFVFMDSPGYDPCSVTGQVATGANLIVFTTGRGSVSGYKPVPCIKIATNSEMYARMEGDMDINAGDVIDRGVTLAAKGREIFETFIEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X6</accession>
    <name>A0A2M9P8X6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001287">
        <property type="protein sequence ID" value="PJN93987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="15625" checksum="7D435E6BEFC9A966" modified="2018-04-25" version="1" fragment="single">MADGWVILPPTVQEGPKPVNFPAIDKVRGEGGAARMIQARQRLGGYGFADETVGPLTDEIGAGVSAAVDYARGGINALAGYARGEAPKNSAGLGELYADHAAIIRADREAYRAEHPTAAATANVLGGLSMLPAKGVAAAQGLWETAKTGAKVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P906</accession>
    <name>A0A2M9P906_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001269">
        <property type="protein sequence ID" value="PJN94011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014767397" evidence="1">
        <location>
            <begin position="21"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17346" checksum="B8821ECEAD39023D" modified="2018-04-25" version="1" fragment="single">MYVKFAAAALALSAAVPAFAADALMTRPIEAASIATEDLNLVAYYVPLGDEGYAVTAVWLADGEAEPRRMTMRLESGDAVTFSLPGHLDTRFTFARHDEVVRVTSTPVVTKFEAASPLRPAPSQFPPPTWAGLAPAHFCACVRTGRARRTGSGRRLRRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P950</accession>
    <name>A0A2M9P950_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001221">
        <property type="protein sequence ID" value="PJN94076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="195"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="335" mass="36693" checksum="1453CE07AFFC1A52" modified="2018-04-25" version="1" fragment="single">RNDWLDVVAPEATETLAGSTLRPPAESLGARFLLAGTLAAEDGALRVSARMMDAETGKLIWSDRWNRDETGFLDLEADVLDRIAGPLGGALTGAIARAELASSQARQPGSLDAYDHFLLGLEAKHHWNREGFMLAATHFKQAIALDPDYAKAWSFLSLNLSFLALEAASQDERQTLWQAAREAAERAYALDPDDPEVLWRVARERGAQGDLENAARMLRRSVELAPGNADVLMVAAWTSHYAGVRGDEPLTWARRAHELTPIRPAKYTISLGLAAFSAKDYQLCVETLRNAPRSPEVLAHLAAAEAILGNVSEAREVARLLREARPDFVIDDMFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P985</accession>
    <name>A0A2M9P985_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TAT-dependent nitrous-oxide reductase</fullName>
            <ecNumber evidence="4">1.7.2.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16495</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.4" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01001199">
        <property type="protein sequence ID" value="PJN94107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050304">
        <property type="term" value="F:nitrous-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd04223">
        <property type="entry name" value="N2OR_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028096">
        <property type="entry name" value="EfeO_Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011045">
        <property type="entry name" value="N2O_reductase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034205">
        <property type="entry name" value="N2OR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041114">
        <property type="entry name" value="Nos_propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13473">
        <property type="entry name" value="Cupredoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18764">
        <property type="entry name" value="nos_propeller"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50974">
        <property type="entry name" value="SSF50974"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0574">Periplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COX2_CUA" evidence="3">
        <location>
            <begin position="187"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="32003" checksum="AEA6A1B245033406" modified="2018-04-25" version="1" fragment="single">VRKFDDLFDDKIQPRDVVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQVCKWNIDAAKRAFAGEEVDPIVQKLDVQYQPGHNHSSMGQTKEADGKWLISLNKFSKDRFLNVGPLKPECDQLIDISGDEMKLVHDNPTFAEPHDATIVHASKINPVSIWDRADPFFAETVKMAEADGIDPTIAADVIRDGDKVRVYMTSSAPAFSLDSFTVKQGDEVTVVVTNIDDVEDLTHGFSIINYGINMEVAPQATASVTFKADKPGVYWYYCSWFCHAMHMEMKGRMLVEPASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D6</accession>
    <name>A0A2M9P9D6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ribulose-phosphate 3-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001172">
        <property type="protein sequence ID" value="PJN94145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016857">
        <property type="term" value="F:racemase and epimerase activity, acting on carbohydrates and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000056">
        <property type="entry name" value="Ribul_P_3_epim-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00834">
        <property type="entry name" value="Ribul_P_3_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7350" checksum="9C68819D3377FAE3" modified="2018-04-25" version="1" fragment="single">RRLREMIGDRPVHIEIDGGVTTETAPLVAKAGADVLVAGSAVFKGGSVRDPAPYGANIRAIREAAASVLAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H2</accession>
    <name>A0A2M9P9H2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpsB</name>
        <name evidence="7" type="ORF">CNY89_16070</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001149">
        <property type="protein sequence ID" value="PJN94175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01425">
        <property type="entry name" value="RPS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00291_B">
        <property type="entry name" value="Ribosomal_S2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001865">
        <property type="entry name" value="Ribosomal_S2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005706">
        <property type="entry name" value="Ribosomal_S2_bac/mit/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018130">
        <property type="entry name" value="Ribosomal_S2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023591">
        <property type="entry name" value="Ribosomal_S2_flav_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12534">
        <property type="entry name" value="PTHR12534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00318">
        <property type="entry name" value="Ribosomal_S2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00395">
        <property type="entry name" value="RIBOSOMALS2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52313">
        <property type="entry name" value="SSF52313"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01011">
        <property type="entry name" value="rpsB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00962">
        <property type="entry name" value="RIBOSOMAL_S2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00963">
        <property type="entry name" value="RIBOSOMAL_S2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="258" mass="27906" checksum="82A5C3292364C6BB" modified="2018-04-25" version="1">MALPEFTLRQLLEAGVHFGHQTHRWNPRMAPYIYGDRNGIHVIDLTQTVPLLDQALLAVRNTVAKGGRILFVGTKRQAQKAVADAAERSAQYHMNHRWLGGTLTNWKTVSQSIARLKSIDEKLASGAEGLTKKERLGLEREQDKLQKSLGGIRDMGGVPDLLFVIDTNKEDLAVLEAKKLGIPVIAVLDTNSSPDGIDFPIPGNDDAARAIALYCDLIARAALDGMSAQMGAAGIDIGGMEESPMEEALEDEAAATEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I2</accession>
    <name>A0A2M9P9I2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001142">
        <property type="protein sequence ID" value="PJN94185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17008" checksum="D5CF6E3F60897921" modified="2018-04-25" version="1">MLATGARAEAPAAGEADFLFVQTARGMSYDAAAKTLTLKGVSPVTLFFSDRPERIAGNMTTAKFVPFWSEGKNSFLQDPPNADLSIIEGGELRQTVVVLRDPQLDGEDLRYTVEIVEGEMPQTGAEVSVFIDVIGMPATPLSYAGVARRGYRRAVMY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T9</accession>
    <name>A0A2M9P9T9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001056">
        <property type="protein sequence ID" value="PJN94308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11879" checksum="5BA8CD67B71987B6" modified="2018-04-25" version="1">MIIRLALFEGKVAAERAAEFREQVQSRLTPLWLRFPGVRQVQVLFTLERDPGVTEVALALSMSFDSQDALDAALASEVRAESTVESLALIAAFDLRVVHYVFEQANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA30</accession>
    <name>A0A2M9PA30_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">YkuD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14765</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001006">
        <property type="protein sequence ID" value="PJN94398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014734820" description="YkuD domain-containing protein" evidence="4">
        <location>
            <begin position="36"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="81"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="23263" checksum="A3C070C32C230325" modified="2018-04-25" version="1">MADERFRMDRRSFGRLAVGAAAAGLSLAGAGGALAQEVETNGDPLRSYVPDAQDQHTLKRRVSGSVSRNWQDYFGSIENGAILADTNDRVLHLWTADGFYRIYPTSVPMNGDMTRRGRTTITLKRPDPEWRPTSGMIERNPDLPRYVGPGPDNPLGVRALNLGFPGAYRIHGTNDIRKVGRQSSNGCIGLFNEHILEVYDRVQVGTPVLLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB2</accession>
    <name>A0A2M9PAB2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000949">
        <property type="protein sequence ID" value="PJN94483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10080" checksum="91CD76024331B7FB" modified="2018-04-25" version="1">MVQGLKRDAQAGEPFCFRGEPSSRPRFETDDLATLLGGRVRARRFSPDTLRVCGKLCGMPRAAEEIEAGLAAERLHGDDAPVPVLAKGKTGATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH5</accession>
    <name>A0A2M9PAH5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron-sulfur cluster assembly accessory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HesB/IscA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000913">
        <property type="protein sequence ID" value="PJN94550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="FeS_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="FeS_cluster_insertion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00049">
        <property type="entry name" value="TIGR00049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="2">
        <location>
            <begin position="10"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12395" checksum="7DDA12713D57BED9" modified="2018-04-25" version="1">MFGIPGKPPVTLTRAAEAQIARLMAGGDTQGLRIGLKKGGCAGMEYTMEYVAEVSPHDEVIEQNGARVMIAPMAQMFLFGTEIDYETGLLESGFRFKNPNVTEACGCGESIKFAGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI5</accession>
    <name>A0A2M9PAI5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-directed RNA polymerase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000923">
        <property type="protein sequence ID" value="PJN94532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007081">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="PTHR19376"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04998">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <feature type="domain" description="RNA_pol_Rpb1_5" evidence="1">
        <location>
            <begin position="8"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="23225" checksum="91F105C147DEB212" modified="2018-04-25" version="1" fragment="single">HIPVQEGDFIQKGEYIMDGNPAPHDILAILGIEALADYLIDEVQEVYRLQGVKINDKHIEVIVRQMLQKWEISESGGTTLLKGEQVDKVEFDEENEKAIAKGFEPAKGAPILLGITKASLQTRSFISAASFQETTRVLTEAATQGKRDRLVGLKENVIVGRLIPAGTGRATQEIKRIATERDRKIIEERKAEAAAALPVGAPAEEIRFDAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM9</accession>
    <name>A0A2M9PAM9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="5">PPIase</shortName>
            <ecNumber evidence="5">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_13670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000893">
        <property type="protein sequence ID" value="PJN94582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000413">
        <property type="term" value="P:protein peptidyl-prolyl isomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024936">
        <property type="entry name" value="Cyclophilin-type_PPIase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044666">
        <property type="entry name" value="Cyclophilin_A-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625">
        <property type="entry name" value="PTHR45625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001467">
        <property type="entry name" value="Peptidylpro_ismrse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="SSF50891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0697">Rotamase</keyword>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="6">
        <location>
            <begin position="18"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18231" checksum="97FA1C5CBF1CD606" modified="2018-04-25" version="1">MAEIKDPENTLVVTLSGGDVVIEMLPDVAPKHVEQIKALARAGEYDNVAFHRVIEGFMAQTGDVENGDMEDGFNLRRAGTGGSKLGDLPAEFSKLPFDRGVLGMARSQNPNSANSQFFIMFKDGHFLNGQYTVWGRVVSGMEHVDAIKRGEPPAAPDRMVKVRVAADA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN6</accession>
    <name>A0A2M9PAN6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methionine synthase I</fullName>
            <ecNumber evidence="4">2.1.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_13620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.13" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000887">
        <property type="protein sequence ID" value="PJN94592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Hcy-binding" evidence="3">
        <location>
            <begin position="21"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7558" checksum="541077C3BCB258BC" modified="2018-04-25" version="1" fragment="single">MGPDPAPDPLERVLAARGWVLADGAMATTLFDLGLTPGEAPERWVETHPERIRALHGEAIEAGAEVILTNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ5</accession>
    <name>A0A2M9PAQ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfurtransferase FdhD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000871">
        <property type="protein sequence ID" value="PJN94620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016783">
        <property type="term" value="F:sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003786">
        <property type="entry name" value="FdhD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30592">
        <property type="entry name" value="PTHR30592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02634">
        <property type="entry name" value="FdhD-NarQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10277" checksum="7483144E9F67DEE5" modified="2018-04-25" version="1" fragment="single">MTSPLHPASTVKILAGEARPATRIIPEEVPVALVHDGITHAVMMATPADLEDFALGFAITEGVARPDQIRDVEVAEQPDGWEVRLWLAPDAGRAVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS7</accession>
    <name>A0A2M9PAS7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SGNH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000869">
        <property type="protein sequence ID" value="PJN94622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043968">
        <property type="entry name" value="SGNH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19040">
        <property type="entry name" value="SGNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH" evidence="1">
        <location>
            <begin position="14"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="253" mass="26971" checksum="8F75246AB439791E" modified="2018-04-25" version="1" fragment="single">PLLDAATAARVLDCARQGPGVAVIGDSHAIDFFNGMDMVYPGRFLVGITSAGCRPGVKKPDYVAECPYDGFAAFVKAHPGVFSDVVFTQSGAHLVATPDAVLGDKLLEEIPETAAVPVEELQIQRGRIDKVADYLSGLSGATRVIWLGPRIEPRIGVNFLLRGGCGYPYALRDGTMDLFGGLDTEIAAAVARKGGIEFVSQIQALDFDMSKDFMTCEQTFWRDGDHWSAAGAARFVGRMIDGPQSALAEALEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ5</accession>
    <name>A0A2M9PAZ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Alanine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12850</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.7" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000814">
        <property type="protein sequence ID" value="PJN94713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004813">
        <property type="term" value="F:alanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006419">
        <property type="term" value="P:alanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018165">
        <property type="entry name" value="Ala-tRNA-synth_IIc_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018164">
        <property type="entry name" value="Ala-tRNA-synth_IIc_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01411">
        <property type="entry name" value="tRNA-synt_2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50860">
        <property type="entry name" value="AA_TRNA_LIGASE_II_ALA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II_ALA" evidence="3">
        <location>
            <begin position="2"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="13226" checksum="9842CC5FAE45C87A" modified="2018-04-25" version="1" fragment="single">MASLNDIRSTFLDFFEKHDHRVVESSPLVPRNDPTLMFTNSGMVQFKNLFTGAEHRDYVRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEAAIPYAWELLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB72</accession>
    <name>A0A2M9PB72_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">VacJ lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MlaA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000772">
        <property type="protein sequence ID" value="PJN94787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007428">
        <property type="entry name" value="MlaA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30035">
        <property type="entry name" value="PTHR30035"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04333">
        <property type="entry name" value="MlaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01805">
        <property type="entry name" value="VACJLIPOPROT"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="258" mass="28228" checksum="FDF8AA3B8246E594" modified="2018-04-25" version="1">MPAIIRPAGGERNPLTRVSPILAWLVLALSLAACAQRPAPSPSLEDDPLEEQNRSSHQLNVALDKQLYGPLSQGYGQVIPEPARNGVTNFVNHTRLPGETIQYAFQGKPIKVLENTFRFAINTVFGFGGLLDPAKEMDLPYDSTNVDETLHVWGVPPGAYWELPAGGPGTQRDWVGYGLDIVADPFFYVGGGAVTAVTALRGVDLLHDRYKLDPAVQALLHESADSYNAQRISYLQNMRARLQGGAQIEELEDPYADY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG6</accession>
    <name>A0A2M9PBG6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000719">
        <property type="protein sequence ID" value="PJN94877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001261">
        <property type="entry name" value="ArgE/DapE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00759">
        <property type="entry name" value="ARGE_DAPE_CPG2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="173" mass="18227" checksum="F4ECD475AFBC567E" modified="2018-04-25" version="1">MLARLVAFPTISDRSNLDLIGYVEGYLAALGVETLRVPDPLEAKASLIARIGPAVAGGVVLSGHTDVVPVEGQPWSSDPFTLTEREERLYGRGACDMKGFLACALAAAPAMAAATLTRPIYLALSHDEEIGCLGAPAMIEALLARHPRPEAVIVGEPSLMRVVSGHKAGSTWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG8</accession>
    <name>A0A2M9PBG8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11850</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000718">
        <property type="protein sequence ID" value="PJN94878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="58"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14899" checksum="02F0A8C51947D97F" modified="2018-04-25" version="1" fragment="single">RRPRAGENPDALEAQGLSVVAIRIGAVMTGSALMAVGGAFLTLSAFNSFFFEMVNGRGWVAIALVVFGAWNPGKALVGALLFGAFDAFQIRLSQAAGGVLPYQVFLMLPYLMSILALILASRRARTPKALMTPWRKGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK1</accession>
    <name>A0A2M9PBK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000700">
        <property type="protein sequence ID" value="PJN94911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_tran_28_C" evidence="1">
        <location>
            <begin position="3"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11243" checksum="ED775532D56AAEE7" modified="2018-04-25" version="1" fragment="single">SRRAGAGSIADITAIGRPAILIPYPHATDDHQAANALGLVSAGGAFLIREEALTPDLLAGHVAAILSDPEGAEAMAEASRGQGRPEATLELAELVERLAARKARREARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK9</accession>
    <name>A0A2M9PBK9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RNA polymerase sigma factor RpoH</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">RNA polymerase sigma-32 factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">rpoH</name>
        <name evidence="9" type="ORF">CNY89_11605</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Interacts with the RNA polymerase core enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the sigma-70 factor family. RpoH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000699">
        <property type="protein sequence ID" value="PJN94914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00961">
        <property type="entry name" value="Sigma70_RpoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009042">
        <property type="entry name" value="RNA_pol_sigma70_r1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012759">
        <property type="entry name" value="RNA_pol_sigma_RpoH_proteobac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00140">
        <property type="entry name" value="Sigma70_r1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000770">
        <property type="entry name" value="RNA_pol_sigma-SigE/K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02392">
        <property type="entry name" value="rpoH_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00716">
        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="2 6" id="KW-0346">Stress response</keyword>
    <keyword evidence="5 6" id="KW-0804">Transcription</keyword>
    <keyword evidence="1 6" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="8">
        <location>
            <begin position="236"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="6">
        <location>
            <begin position="237"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="region of interest" description="Sigma-70 factor domain-2" evidence="6">
        <location>
            <begin position="34"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="200"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Interaction with polymerase core subunit RpoC" evidence="6">
        <location>
            <begin position="58"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="32279" checksum="AB878BE375B0019A" modified="2018-04-25" version="1">MQEIRKFPMLEPEQEYMLAKAWVDHGDKDAAHQLVTSHLRLAAKIAMGYRGYGLPTAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTAAQKKLFFNLRKAKNKIGAIEEGELRPENVARIAHDLNVTETEVISMNRRMAGGDSSLNAQIKGDGEGTAEWQDWLEDEDADQAMAYAERDELDSRREMLLASMESLNERERHILTERRLKDDPVTLEELSKEYDVSRERIRQIEVRAFEKLQKRMRELAAERGMETVGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM8</accession>
    <name>A0A2M9PBM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000687">
        <property type="protein sequence ID" value="PJN94935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7520" checksum="E33785921C3F94F9" modified="2018-04-25" version="1">MAILQTNCAAPLGSVLTFRLVTLVERAIDGALAWRRSRETARQLSRLSDEQLSDIGIARDEIPGVAGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT4</accession>
    <name>A0A2M9PBT4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Conjugal transfer protein TraA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_11190</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MobA/MobL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000663">
        <property type="protein sequence ID" value="PJN94984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005053">
        <property type="entry name" value="MobA_MobL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03389">
        <property type="entry name" value="MobA_MobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0184">Conjugation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobA_MobL" evidence="4">
        <location>
            <begin position="8"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="244"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="244"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="30731" checksum="5A18A1E98417C17F" modified="2018-04-25" version="1">MTARRCDAVEAVETRKDAQVAREITVALPAELDAADRRALVEGWVADQLVSEGMVADIAFHAPHREGDQRNHHAHILLTTRGLGPEGFGPKERGWNGKDQLATWRESWAEAQNRALERAHVSERVDHRGLAAQGLEDLPTRHLGPAATALERQEAREAAKMGREVEPITEAGRWNAFTRECNAALGWARERAQEARDLWDGLTRQVSGLADQLTALLGSGLEREIAVEARERWERSFEGRMARLREERKQERAREGEREGPRPRTPGTRGWSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY7</accession>
    <name>A0A2M9PBY7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Elongation factor G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">fusA</name>
        <name evidence="2" type="ORF">CNY89_10745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000627">
        <property type="protein sequence ID" value="PJN95055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="8"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="301" mass="33544" checksum="2A92621DB955A642" modified="2018-04-25" version="1" fragment="single">MAREYPLELYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVHDGAATMDWMEQEQERGITITSAATTTFWERTEDGKTPDGPKHRFNIIDTPGHVDFTIEVERSLAVLDGAVCVLDANAGVEPQTETVWRQADRYGVPRIVYVNKMDKIGADFFNCVRMIKDRTGAIPCPIQLPIGAETALEGHVDLITMEEWTWTGEDLGATWTRQAIRPELADQAAEMRSTMVELAVEMDDAAMEAYLDGTEPDVATLRKLIRKGTLAMKFVPVICGSAFKNKGVQPMLNAVIDFLPNPLDVKPYMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC20</accession>
    <name>A0A2M9PC20_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000609">
        <property type="protein sequence ID" value="PJN95097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="9"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9811" checksum="2044FF0F13E78D47" modified="2018-04-25" version="1">MNMLSDHLQRHGITQAQFADRAGVNQGFVSRLCRGLVMPSLEKAAHIERITGGEVPMSSWVPAAASPLGNSRNTIIPDPLGSVSETVNTEGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC44</accession>
    <name>A0A2M9PC44_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Pyrroloquinoline quinone biosynthesis protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000619">
        <property type="protein sequence ID" value="PJN95074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018189">
        <property type="term" value="P:pyrroloquinoline quinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00654">
        <property type="entry name" value="PQQ_syn_PqqC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011845">
        <property type="entry name" value="PqqC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039068">
        <property type="entry name" value="PqqC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004305">
        <property type="entry name" value="Thiaminase-2/PQQC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40279">
        <property type="entry name" value="PTHR40279"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03070">
        <property type="entry name" value="TENA_THI-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="SSF48613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02111">
        <property type="entry name" value="PQQ_syn_pqqC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0884">PQQ biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TENA_THI-4" evidence="2">
        <location>
            <begin position="10"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="27445" checksum="457ADD03DB267953" modified="2018-04-25" version="1" fragment="single">MTASRSEFEARLRRIGAERYHDRHPFHHRLHSGGCTPDEVRAWVINRYYYQSRIPMKDAAFMSRVEDPDLRRAWRSRMEDHDGTEANEGGIRRWLRLAEAVGLDPAYVASTAGVMPATRFAVDAYVRFVRDRTLLEAVAASLTELFAPAIHARRIEGLLKHYPFANDQSLAYFSNRLQEAPKDVAFGLAWVLDHADTAEKQDAAAGALIFKTEVLWAQLDALEGAYVTPARIPPGAWVPGEGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC83</accession>
    <name>A0A2M9PC83_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">Signal peptidase I</fullName>
            <ecNumber evidence="3 7">3.4.21.89</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">lepB</name>
        <name evidence="10" type="ORF">CNY89_10315</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins.</text>
            <dbReference type="EC" id="3.4.21.89"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Membrane</location>
            <topology evidence="8">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the peptidase S26 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.89" evidence="3 7"/>
    <dbReference type="EMBL" id="PHNO01000590">
        <property type="protein sequence ID" value="PJN95128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006465">
        <property type="term" value="P:signal peptide processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06530">
        <property type="entry name" value="S26_SPase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000223">
        <property type="entry name" value="Pept_S26A_signal_pept_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019758">
        <property type="entry name" value="Pept_S26A_signal_pept_1_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019757">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Lys-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019756">
        <property type="entry name" value="Pept_S26A_signal_pept_1_Ser-AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019533">
        <property type="entry name" value="Peptidase_S26"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43390">
        <property type="entry name" value="PTHR43390"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10502">
        <property type="entry name" value="Peptidase_S26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00727">
        <property type="entry name" value="LEADERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02227">
        <property type="entry name" value="sigpep_I_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00501">
        <property type="entry name" value="SPASE_I_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00760">
        <property type="entry name" value="SPASE_I_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00761">
        <property type="entry name" value="SPASE_I_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 7" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S26" evidence="9">
        <location>
            <begin position="12"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="42"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600223-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF10502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="29054" checksum="86A507AE9A5AA0F8" modified="2018-04-25" version="1">MSTKSKAKGGILELVKTIVYALLLAGVIRTLFFQPFWIPSGSMIPTLLVGDFLFVNKMAYGYSRYSCPFAQICPFSGRILASEPERGDVIVFKHPKDGVDYIKRLIGLPGDVIEMKAGVLYINGQPAPQEPDGLFVEKNVPQGPMRALPRCMNRPVAPGGDCEAELAWETLPEGPRHRILNIETNGPGDDAGPFTVPPGEYFFMGDNRDNSMDSRFSRAAFGVGTVPFENFVGRADRVIFSSAGASMLFFWTWRPDRFFVAVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG9</accession>
    <name>A0A2M9PCG9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xanthine dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000550">
        <property type="protein sequence ID" value="PJN95214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C2" evidence="1">
        <location>
            <begin position="31"/>
            <end position="553"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="616"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="616" mass="66304" checksum="0CB58586487034DE" modified="2018-04-25" version="1" fragment="single">ASFEPTHSSGGRAWDIGAIFSSRPIEAKSGRKAFAAAAHVTRLELVDNRVMGMSMEPRGCWADWRDGRLHLGFSGQGVWNLKAELAAKLGLDPAEVHVSIPDVGGGFGIKGFNYPEYFALAFAARKLGRPLRWMSTRGEAMLTDNHGRDHVTVAEAAFDADHRLQALRIDCVSNLGAYNSPEGQIIASELALKVMPGAYDVQKTRFTVRGVYTNTTPVDAYRGAGRPEAIYVIERLMDWSARDLGLDPVELRRRNFIPRDAFPYRSASGETYDVGDFPRVLDRALKEADVAGFPARKAESAARGRLRGLGLAYYIESILGATKEGARIEFAPDGMVEVHVGTQSNGQGHETACAQFLHARAGIPIDRIRFIQGDSDRIAKGGGTGGSRSMTMQGNAINQTADEVIARFRPLAEEELEVAGVDLAWEEGAFRVVGTDRAVTLIDLAGVARARGLTELLSTHTLYSLPARSYPNGAHFVEVEVDPDTGGLGIAKYTVVDDFGFLVNPMLAEGQVHGGVVQGIGQAVAELAAYSPEGQLLSGSFMDYYMPRAEDVPFMAFHAELVPSTANEVGMKGCGEAGTVGALAAQGRVAGPERAADRPGGLHRILRLHPARGDDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI2</accession>
    <name>A0A2M9PCI2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyridoxal kinase</fullName>
            <ecNumber evidence="1">2.7.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.35" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000539">
        <property type="protein sequence ID" value="PJN95238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008478">
        <property type="term" value="F:pyridoxal kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009443">
        <property type="term" value="P:pyridoxal 5'-phosphate salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004625">
        <property type="entry name" value="PyrdxlKinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10534">
        <property type="entry name" value="PTHR10534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="2">
        <location>
            <begin position="13"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="17070" checksum="6E80886F813705D4" modified="2018-04-25" version="1">MMGDSDLGFFVPADLQAAFRERLVPLANIVTPNAFELAALSGMPVVTSADVAAAAASIGTATVITTGVSAEDDSVCTMLAEAGALWVATTARIDARPAGTGDLFTGLFAARLAKGFAARPAMEAAVAGTFETLKRTARGAWEEMPIIADIAAIIEPAEVFPAERIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU9</accession>
    <name>A0A2M9PCU9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Alpha-glucoside ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09015</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000490">
        <property type="protein sequence ID" value="PJN95348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014650800" evidence="4">
        <location>
            <begin position="22"/>
            <end position="451"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="451" mass="48764" checksum="32FE5B1F65CD588C" modified="2018-04-25" version="1">MKASLLAGAAVLAVLAGAAKAQDLKFAPGEDARFNWASFEEFKAGHDLSGQTLTIFGPWRGEDQDLAESVLNYFRAATGATVNYSSSENYEQQIVIDTQAGSPPDIAILPQPGLIADLAAKGALAPLGPEVGTWLAENYAAGDSWVKLATYKGKDGQEGIYAFPYKIDVKSLVWYVPENFEDAGYEIPETLEDLKALTQQIVDDGGTPWCIGLGSGGATGWPATDWVEDMMLRINSPEVYDQWVTNEIPFNDPRVIAAIEEFGWFARNDDFVDGGAQAVATTDFRDSPKGLFSSPPKCYMHRQASFVPSFFPEGTEVGVDADFFYLPADPAKDLGTPVLGAGTLAMITKDTPAARAFIEWLETPIAHEVWMAQSSFLTPFKSANVETYANEPMRKQGEILTDATTFRFDGSDLMPGKIGAGAFWTAMVNYAGGASAEDVTTSVQQAWDSIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW8</accession>
    <name>A0A2M9PCW8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000469">
        <property type="protein sequence ID" value="PJN95397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="35816" checksum="FFAA56D45CF0AB25" modified="2018-04-25" version="1" fragment="single">GTSYAYTFDAANADAPTRHTRQYFEMMGQWALYDDGWLLSTKVDRAPWDAYSPANPDPLNNQVFQLYDLKSNWNQSDDIAAQHPEKVTEMRAMFLEEANKYQVLPLDASVGARVASARPSLIAGRDELVYTAPMTGTPQGDAPYLLNTSFTITAEITVPEGGAEGMIVTSGGRFAGYGMYLLEGKPVFLWNLLDLERMKWEGKEALKPGKHVIEFDSKYEGLGVGTMAFNNFSGIGRPAETTFKVDGVVVDSKRMEKTIPIILQWDESFDIGSDTITGVNDDDYLPPFPLTAKLDKLTIKIDRPQLSEADIKKLKEAMAKASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD14</accession>
    <name>A0A2M9PD14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08700</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TrbG/VirB9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000466">
        <property type="protein sequence ID" value="PJN95402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06911">
        <property type="entry name" value="VirB9_CagX_TrbG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010258">
        <property type="entry name" value="Conjugal_tfr_TrbG/VirB9/CagX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033645">
        <property type="entry name" value="VirB9/CagX/TrbG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038161">
        <property type="entry name" value="VirB9/CagX/TrbG_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03524">
        <property type="entry name" value="CagX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014916015" evidence="3">
        <location>
            <begin position="28"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="29972" checksum="0E8492743F4C2013" modified="2018-04-25" version="1">MMRSRNRFTAASLIVLSLLLGAAPVLAETQPRAIGVDPRIKQYTYARDTVYRLDLAMKFMTAIEFAPGEAIDSVLMGDSESWQVTRLQSGNVLAVKPLIESARTNMTVYTSQNVYTFELRAVGVPAGSSTLNYRIGFRYPDRERAKAASRQVEQARPRDPNYYVAGPKAAFRPVAVYDDGRRTTFAFPPDAPRPAIFRVDAEGRESIVNVREGETDATVVGTSDRWTLRIGAEEPLGDHAEWHRSRQCRLGRDHLCQQSRPDRDHPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD52</accession>
    <name>A0A2M9PD52_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000445">
        <property type="protein sequence ID" value="PJN95453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009576">
        <property type="entry name" value="Biofilm_formation_YgiB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06693">
        <property type="entry name" value="DUF1190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="189" mass="19662" checksum="DEEC505B8367C88E" modified="2018-04-25" version="1" fragment="single">MTDRPCAENARRRLRSRTVRGALLGMSAFALTACEEPIDLTFFSDVDQCRAAAAESSEFSVGDCDRAFEQAMAEHAVLAPRYDELALCEEQHGAEACAPVEVAGGVPGEEPVASQAGMGFMPFFMGYMIGNALGRSSPGGYAGRPVYSDGKGGLFSSDGKRMGFAGPGSTVRGTPAAVRAPALSAPMAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD59</accession>
    <name>A0A2M9PD59_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000443">
        <property type="protein sequence ID" value="PJN95458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8850" checksum="DAFFE6DAB849E4D3" modified="2018-04-25" version="1" fragment="single">MRRRFDRPDRPPQVDEGAWARLGEHPGLGAGDLAVELRNDAERQVACLEPVLEHLAARSASQEKILSPTMTWLFERTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD4</accession>
    <name>A0A2M9PDD4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000398">
        <property type="protein sequence ID" value="PJN95561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8276" checksum="9F5BDEC0EDA91E57" modified="2018-04-25" version="1">MSSIDLEMRQEAGLIDGAEASRQISQMVGTIYRREGNLSGGVYARRANSALARIVADKPSDAVFASQVKTCRALFGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE1</accession>
    <name>A0A2M9PDE1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH_21 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000414">
        <property type="protein sequence ID" value="PJN95528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038965">
        <property type="entry name" value="InsF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46889:SF1">
        <property type="entry name" value="PTHR46889:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_21" evidence="2">
        <location>
            <begin position="17"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="127"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="173"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="193"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="230"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="299" mass="33574" checksum="F055EC9D4BB9650B" modified="2018-04-25" version="1">MGVARSSFHAEPEGKPRDEEIVAEIRAITDMFEGYGYRRVDAELRHRGFVVNAKKVRRLMREHDLNPRRRRRFVRTTDSDHDGPIHPFVARGFEIHGPDQLWVADLTYVAIAAGFAYVAPIMDAWSARHRPPDRRPPRRPGPEKGGRAAQSAAGLRLPLRPRVPIRFRPAPRSAEGARLRRLDEPTRQPVRQPAGREPHEDAEGGGRLPDGVRNLRGRLRRPAPIHRSLQRTTPALSLGVSQPRPSSSTATPEPLSKAPPDRAHPQGRTPLICQSSASVPRPGSIRPWARTCSRRRRSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN9</accession>
    <name>A0A2M9PDN9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TIGR01459 family HAD-type hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000363">
        <property type="protein sequence ID" value="PJN95643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="24005" checksum="D3AB7402063A9BF7" modified="2018-04-25" version="1" fragment="single">QIAALGAPRGCYDLIVSSGDAAQMAMAGGRFGRRVHHIGPDRDLPFFTDEAGRPYDVELVPLEEAEGIVCTGLFDDQTETPEDYRATILYGVTKGLPLLCANPDVIVDVGDQRIYCAGAIAEAYAAAGGESFYFGKPHPPIYTLARAKLAQLVGEEVSSEDILCIGDGIATDILGAMGENIDSIFVTGGLAAEETGTTPDRGPDPGRLAVFLAEARLSSLYAMSFLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV4</accession>
    <name>A0A2M9PDV4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000334">
        <property type="protein sequence ID" value="PJN95716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="4"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="24381" checksum="5EBBDFB6A5E477A5" modified="2018-04-25" version="1">MAQATLTISSKNYSSWSLRGWLLCRMAGLDFEERSIDLDLGARQELLLLSPSVLVPRLSHDGVEVWDTLAIAEYLNEVFPQAGLWPAGQANRAFARAIAGEMHSGFYNMRSALPMNLKARHARFKIFSGARPDLERIRMVWTECLERSGGPWLFGAAPCVADAMYAPVCTRLRTYSVEVSPVAQAYCETVFAWDLMQEWTAAALEEPEEIVELEVEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV5</accession>
    <name>A0A2M9PDV5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Molecular chaperone Hsp33</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_06785</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000328">
        <property type="protein sequence ID" value="PJN95730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00498">
        <property type="entry name" value="Hsp33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.30.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000397">
        <property type="entry name" value="Heat_shock_Hsp33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016154">
        <property type="entry name" value="Heat_shock_Hsp33_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016153">
        <property type="entry name" value="Heat_shock_Hsp33_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023212">
        <property type="entry name" value="Hsp33_helix_hairpin_bin_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30111">
        <property type="entry name" value="PTHR30111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01430">
        <property type="entry name" value="HSP33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005261">
        <property type="entry name" value="Heat_shock_Hsp33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118352">
        <property type="entry name" value="SSF118352"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64397">
        <property type="entry name" value="SSF64397"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="328" mass="35026" checksum="C1019C24AA7A1A86" modified="2018-04-25" version="1">MSIAGQIAWDDTILPFQLDRADVRGRVARLDSVLETILDQHAYPAPVAALIAEAVLLTALIGQTIKLRWRLSLQVRGQGAVRLIATDYFGPSEEGEPARMRAYAGFDKAAVAAHEGAPYDLVGGGIFAILVDQGPGATPYQGMTPITGASLAECAETYFAQSEQLPTRFALAMGEAMSPGKPARWRSGGVMLQHMPKASPSVETVAGPEGLTSIADLLEGEDADDWNRAVTLLATVEATELIGPLVGPDQLLLRLFHEEGPRVYTPQPVRFGCTCGPEKVVKSLSIYGPEEIAAMTTEDGKVTADCQFCGAHYEFDPSELGLRPGSED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX0</accession>
    <name>A0A2M9PDX0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000332">
        <property type="protein sequence ID" value="PJN95722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029465">
        <property type="entry name" value="ATPgrasp_TupA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14305">
        <property type="entry name" value="ATPgrasp_TupA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="368" mass="42852" checksum="F276ECA3DFE08281" modified="2018-04-25" version="1">MCRRHINQSTRRRAFAFQPPLSYPAGAVGVCKRPAEVYSDLIRTPSVKRSGSLAQSVKDRVKRYVFPDYVLARRQYYHRNGFYPDLNNPRDLSEKILWLKLYDRSPLHTRCADKILVRDHVEARIGGQFLAPKFLATYDLDEVSPETIREERFVMKTNHDQGGVFICLDRARFDWARALDQIRARARINKYYEFQERQYRDIRPGVLVEGFIEGEDGRNAVELKVNCFEGKPQFIQVIVDRFEKRRHVNYDLNWRRMDLHGRSLGLEYDLPRPAQLDLVLEAAGTLASPFLFCRVDFLLGAGGRPWFGEMTFHPAAGLVRYNPPEMERALGDLIDLRRFAEFAEAQRRIWSEDARARPLLSGALRDAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX9</accession>
    <name>A0A2M9PDX9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000321">
        <property type="protein sequence ID" value="PJN95749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009351">
        <property type="entry name" value="YcaQ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06224">
        <property type="entry name" value="HTH_42"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13882" checksum="9914812F734727C6" modified="2018-04-25" version="1">MFDIWLQAQGLDRPAPFGTGAEAVADATAHLGYVQIDTIHVIERSHHHILATRIPGYRRDHLARAQSLDKSVFEYWTHALAYVPTADLPHYLRDMAAHRANPSRWFGSVTPADLRAMRRSWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY5</accession>
    <name>A0A2M9PDY5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000318">
        <property type="protein sequence ID" value="PJN95757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029028">
        <property type="entry name" value="Alpha/beta_knot_MTases"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029026">
        <property type="entry name" value="tRNA_m1G_MTases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75217">
        <property type="entry name" value="SSF75217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5050" checksum="1BBFA80254BCBDAB" modified="2018-04-25" version="1" fragment="single">MAGTDHGRRQAQAPGPSFILVAPQMGENIGAAARAMWNFGLDRLRLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY9</accession>
    <name>A0A2M9PDY9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Membrane fusion protein (MFP) family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_06560</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000312">
        <property type="protein sequence ID" value="PJN95770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010129">
        <property type="entry name" value="T1SS_HlyD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01843">
        <property type="entry name" value="type_I_hlyD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="10">
        <location>
            <begin position="69"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="261"/>
            <end position="295"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="48867" checksum="2D844E79BB05B0C1" modified="2018-04-25" version="1">MTALPPDLTPEPSDRWNIGRFLILGYATLAFMVVGFGAWGGFTNIAGAIVAHGTIEVQGNRQVVQHAKGGVIEKINVRDGDVVKAGDVLVELAGDDERSEFGIVEGQWFEILARKARLSAERDLSDTIVFSPELVDRAARDPKAAELMVAQQQQFEASAKVRDEELAQLNEREQQIEKQNVGLVAVDKATRSQLDMLSQEIKVQEDLLAKGLTQLARVLALKREFASLEGESGRAEAAIAENGGKIAETAIERVRLVSKMREEAIAELRDLEYREIELRERRAALTMQIEDLELRAPVSGVVYGSTVDTLRGVIRAAEPIMYIVPQDAGLVVKAKVEPVNIDRVHVGQDARMRFAAFDARTTPEVDGKVLKVSADAIVEQQTQQRYYLAEISITQEARDKLGEVEILPGMPVESYIRTGDRSPLVYLTKPLTDYFAKAFREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE3</accession>
    <name>A0A2M9PEE3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">dTDP-4-dehydrorhamnose reductase</fullName>
            <ecNumber evidence="4 6">1.1.1.133</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rfbD</name>
        <name evidence="8" type="ORF">CNY89_05635</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>dTDP-beta-L-rhamnose + NADP(+) = dTDP-4-dehydro-beta-L-rhamnose + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21796"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57510"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="1.1.1.133"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 1 Mg(2+) ion per monomer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the dTDP-4-dehydrorhamnose reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.133" evidence="4 6"/>
    <dbReference type="EMBL" id="PHNO01000257">
        <property type="protein sequence ID" value="PJN95921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008831">
        <property type="term" value="F:dTDP-4-dehydrorhamnose reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005913">
        <property type="entry name" value="dTDP_dehydrorham_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029903">
        <property type="entry name" value="RmlD-like-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10491">
        <property type="entry name" value="PTHR10491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04321">
        <property type="entry name" value="RmlD_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01214">
        <property type="entry name" value="rmlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0521">NADP</keyword>
    <keyword evidence="6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RmlD_sub_bind" evidence="7">
        <location>
            <begin position="1"/>
            <end position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010944"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU364082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF04321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="29855" checksum="EBC7B2BA1FE09AE3" modified="2018-04-25" version="1">MRLLVLGSAGQLGGDVMEAAALKGIEARGATRADVDVGDLGALRTFLETESFDALVNCAALLNTEALEGDPAPAVTVNGHAPAVMAEVAAAKGARMIQVSTDYVFGGDAARTTPLAEDAPTAPVNVYGLTKAFGETLAQLDGADVAVFRVASTFGVRGAAGKGGNFVETMIRMGRERGALKVVSDQIMSPTSTAWAAGAILAFLQKQGPAGVYHAVNTGAVSWCDFAKAIVARAGVAAEVSSCLASDWPSKARRPAYSALDNAKLAGVIGPIPGWEAALDAYLVAKGHLASPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF4</accession>
    <name>A0A2M9PEF4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3'(2'),5'-bisphosphate nucleotidase CysQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000265">
        <property type="protein sequence ID" value="PJN95898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="210"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="232" mass="24358" checksum="894090A79CBE3DBF" modified="2018-04-25" version="1">MDYAAIVSVCRRLALEAGTEILDVYNGPDFDVKSKSDASPVTEADERADTLISAGLRAAFPDVAQVTEEQAATHGSTASTFFIVDPLDGTKEFIQRRGDFTVNIALVEDGVPTRGVVYAPAIGRLFYTGADGATVEETGSFDSAAPGPVTPLHVSDPDPEALVVVASKSHRDKATDDYIARYPVKDFRSAGSSLKFCLVAAGEADLYPRLGRPCRIPGPGTGSGSSSPTSGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG3</accession>
    <name>A0A2M9PEG3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Malic_M domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05715</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000262">
        <property type="protein sequence ID" value="PJN95908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004471">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05311">
        <property type="entry name" value="NAD_bind_2_malic_enz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012302">
        <property type="entry name" value="Malic_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045213">
        <property type="entry name" value="Malic_NAD-bd_bact_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03949">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00919">
        <property type="entry name" value="Malic_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Malic_M" evidence="4">
        <location>
            <begin position="60"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="374"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="374"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="411" mass="43925" checksum="39C3B8C627508227" modified="2018-04-25" version="1" fragment="single">MDVFDIEVDETDPDKLVEIIAALEPTFGGVNLEDIKAPECFVVETKLRARMKIPVFHDDQHGTAIVSSAALLNALHLVGKDIGAVKLVCSGAGAAAIACLNLAVSLGVKRENVFVIDSKGVVTTDRPNLDPQKAAYAQDTQARTLADAMEGADVFFGLSAAGVLKPEMVAKMAEKPIILAMANPDPEIRPEDAKRVSPDCIIATGRSDYPNQVNNVLCFPFIFRGALDVGASEINEEMKLACVRAIAELARADVSDVVAAAYGGQNIGFGPDYIIPAPFDPRLITVVAPGQVLDHRHEDAEDAVMRGIEPLDLQVVQRHGRGGVAGEDDQPAAFGEQPLDALDGEVVDLARVAPAVGRVGVVAEIDEILPRQLRAHRRQHRQPAEAAVEDPDHRLAFSATPERPSRRSSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM7</accession>
    <name>A0A2M9PEM7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exodeoxyribonuclease III</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA repair enzymes AP/ExoA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000249">
        <property type="protein sequence ID" value="PJN95944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008853">
        <property type="term" value="F:exodeoxyribonuclease III activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09086">
        <property type="entry name" value="ExoIII-like_AP-endo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004808">
        <property type="entry name" value="AP_endonuc_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020847">
        <property type="entry name" value="AP_endonuclease_F1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037493">
        <property type="entry name" value="ExoIII-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43250">
        <property type="entry name" value="PTHR43250"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00633">
        <property type="entry name" value="xth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00726">
        <property type="entry name" value="AP_NUCLEASE_F1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51435">
        <property type="entry name" value="AP_NUCLEASE_F1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="2">
        <location>
            <begin position="6"/>
            <end position="253"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="28994" checksum="9D82F13A880F629A" modified="2018-04-25" version="1">MTVTIATWNINSVRLREQTVLRFLREEGPDVLCLQETKSPVEKLPLEGFAGLGYGHVVARGQKGYNGVMILSRLPIEDAGDRGFCGKGDARHVAARLPSGAVVHNLYIPAGGDIPDPAANEKFRHKLDFLEELRAWFAAEQPHKAILVGDLNIAPREDDVWNHKALLKIVSHTPVEVEALGAVQGAGAWVDVTRAHIPDGRLYSWWSYRAADWDAADKGRRLDHVWATPDLAERSGGSRILRPVRGWEQPSDHVPVLAEFEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET0</accession>
    <name>A0A2M9PET0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Acyl-homoserine-lactone synthase</fullName>
            <ecNumber evidence="3">2.3.1.184</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Autoinducer synthesis protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04840</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a fatty acyl-[ACP] + S-adenosyl-L-methionine = an N-acyl-L-homoserine lactone + H(+) + holo-[ACP] + S-methyl-5'-thioadenosine</text>
            <dbReference type="Rhea" id="RHEA:10096"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:55474"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
            <dbReference type="EC" id="2.3.1.184"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the autoinducer synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.184" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000212">
        <property type="protein sequence ID" value="PJN96049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061579">
        <property type="term" value="F:N-acyl homoserine lactone synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009372">
        <property type="term" value="P:quorum sensing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001690">
        <property type="entry name" value="Autoind_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39322">
        <property type="entry name" value="PTHR39322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00765">
        <property type="entry name" value="Autoind_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01549">
        <property type="entry name" value="AUTOINDCRSYN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51187">
        <property type="entry name" value="AUTOINDUCER_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 3" id="KW-0071">Autoinducer synthesis</keyword>
    <keyword evidence="2 3" id="KW-0673">Quorum sensing</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="22629" checksum="30F93842E78B0264" modified="2018-04-25" version="1">MRYITFDFLGQYRHGSAYLQFLRLRKRFFVDVLDWDIPHNDEVEIDQYDNPCAHYALVLRGSTVVGGARVMPTTSTWGRYCYMLRDALRGEFSIPPSVVAEEIVSEQVWECTRLVVSDDLTTQADRANCLSLLLEASSQVVREGGGHELISLSPVPMVRTLRQLGYPARQIGTPYCDADGRRYAMLRMPTYNPAAAIAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF04</accession>
    <name>A0A2M9PF04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Acyl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_04720</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000205">
        <property type="protein sequence ID" value="PJN96074.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025878">
        <property type="entry name" value="Acyl-CoA_dh-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020953">
        <property type="entry name" value="Acyl-CoA_DH_N_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12806">
        <property type="entry name" value="Acyl-CoA_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12418">
        <property type="entry name" value="AcylCoA_DH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AcylCoA_DH_N" evidence="9">
        <location>
            <begin position="3"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="79"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="162"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="278"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_C" evidence="10">
        <location>
            <begin position="460"/>
            <end position="581"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96074.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="586" mass="61696" checksum="47E77B30DE9303F9" modified="2018-04-25" version="1">MTDYVPPLREIRFALDALAGLPAIAALPGFEEATADLTDSILEEAGKIAAGVLGPLNRAGDLDGAKLTEAGVRTTPGWKAAWETLIEGGWNGLPYPADFGGMGLPQALNLAVQEMWQSANMAFALCPMLTQGAANAIELYGSEDQKARFLPKMVSGEWTGTMNLTEPLAGSDLAAVRSRAVPEGDLYRVSGQKIFITYGDHDLTENIVHLVLARLPDAPAGVKGISLFIVPKVLEDGTANDVACVSLEHKLGIHGSPTAVLAFGDEGGALGELVGEPNRGLEYMFAMMNHARLNVGLQGLAIAERAFQQARAYARERKQGKPVGWTDGPVGIVEHPDVRRMLMSMKSRIEAMRGLLYEVAAAHDVAHAHPDPEVRAAAERKVELLTPIAKGWCTETGIELASLGVQIHGGMGYVEETGAAQHWRDSRITTIYEGTTGIQANDLVGRKVIRDGGAAARELIGGIEADAKAAPGGLSAEGAALVSAAGTAGEAVETLLASGKADPRSPYAAAVPFLNLMGVLVGGHVLLRGAQAAVAEIEKGNNDPWWEARIGLARFYAAHVLPQVRAQLAAITDGAAPVYAFDEALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF29</accession>
    <name>A0A2M9PF29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Fe3+/spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04320</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000185">
        <property type="protein sequence ID" value="PJN96136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="28182" checksum="2089FBFBD0E99698" modified="2018-04-25" version="1" fragment="single">MAFLELDGLQKGFGANQVVRGVSLAVEPGEFVSFLGPSGCGKTTTLRMVAGFETPDQGAIRIEGRDVVRLRPRERRIGMVFQSYALFPNLTVAENVAFGLKVAGASKAETAARVQEMLEIIRLPDLGARYPYQLSGGQQQRVALARALAVGPKLLLLDEPLSALDAKIRISLRDEIRAIQRRLGITTIYVTHDQEEALSMSDRIVVMNAGRVEQVGAPFEIYNRPATRFVASFVGTLNLIEGRATDAGAGRVAVTGGRAGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF92</accession>
    <name>A0A2M9PF92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000164">
        <property type="protein sequence ID" value="PJN96217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8322" checksum="7C48ED6D39240CDD" modified="2018-04-25" version="1" fragment="single">MTRERGGSRRIHISRSAAIAAIPPCRAERRASAVRPALARSASKVVSMRFTASSAIGETGGACSPRLAEAAISASSKNLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF8</accession>
    <name>A0A2M9PFF8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Phosphoribosylformylglycinamidine synthase subunit PurL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03635</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000151">
        <property type="protein sequence ID" value="PJN96258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.650.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00420">
        <property type="entry name" value="PurL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010074">
        <property type="entry name" value="PRibForGlyAmidine_synth_PurL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041609">
        <property type="entry name" value="PurL_linker"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010918">
        <property type="entry name" value="PurM-like_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036676">
        <property type="entry name" value="PurM-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43555">
        <property type="entry name" value="PTHR43555"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02769">
        <property type="entry name" value="AIRS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18072">
        <property type="entry name" value="FGAR-AT_linker"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56042">
        <property type="entry name" value="SSF56042"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01736">
        <property type="entry name" value="FGAM_synth_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGAR-AT_linker" evidence="7">
        <location>
            <begin position="28"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS" evidence="5">
        <location>
            <begin position="99"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS_C" evidence="6">
        <location>
            <begin position="215"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="domain" description="AIRS" evidence="5">
        <location>
            <begin position="457"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="606"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF18072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="606" mass="64355" checksum="0D091EFF307029B3" modified="2018-04-25" version="1" fragment="single">MTAAPKTPEPETTAPAEPAITPELIAAHGLEPDEYQRILDLIGRTPSLTELGIFSAMWNEHCSYKSSKKWLRTLPTEGPQVICGPGENAGVVDIGDGQALVFKMESHNHPSYIEPYQGASTGVGGILRDVFTMGARPIAAMNALSFGEPSHPKTRSLVHGVVEGIGGYGNAFGVPTIGGELRFHKAYNGNCLVNAFAAGLAQADAIFYSAASGVGMPVVYLGAKTGRDGVGGATMASAEFDDTIEDKRPTVQVGDPFTEKRLMEACLELMATGAVISIQDMGAAGLTCSAVEMGDKGGLGIRLDLDKVPVREERMTAYEMMLSESQERMLMVLRPEKEAEAKAVFDKWDLDFAIVGETIPEDRFLILLNGEVKADLPLKALSGTAPEYDRPWVETSPAAPVGEIPEIDPGEALKALVASPNYGGRAWVWRQYDHMVMADTAVPPGSDAGVVRVHGTDKAIAFTSDVTPRYCRANPLQGGRQAVAEAYRNLSATGARPLATTDNLNFGNPRKPEIMGQFVGCIQGIGEACLALDMPIVSGNVSLYNETDGAPILPTPTIGGVGLLASLSELIRMAPTDGDRLMLVGETLGHLGQSALLAEIFDREEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM6</accession>
    <name>A0A2M9PFM6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NADH-quinone oxidoreductase subunit N</fullName>
            <ecNumber evidence="6">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">NADH dehydrogenase I subunit N</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">NDH-1 subunit N</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nuoN</name>
        <name evidence="9" type="ORF">CNY89_03015</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2 7">Membrane</location>
            <topology evidence="2 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the complex I subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000119">
        <property type="protein sequence ID" value="PJN96357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00445">
        <property type="entry name" value="NDH1_NuoN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010096">
        <property type="entry name" value="NADH-Q_OxRdtase_suN/2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01770">
        <property type="entry name" value="NDH_I_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0874">Quinone</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <keyword evidence="6" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="198"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="320"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="368"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="401"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="442"/>
            <end position="463"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="8">
        <location>
            <begin position="122"/>
            <end position="415"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00445"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="478" mass="50317" checksum="049278F6E115EF74" modified="2018-04-25" version="1">MLSQNLAVVAPEIALAVAAMAILMWGAYSPREVGRPALWLTALLLAIAGLWVGFQPEGTRLAFDGAFVSDGFARFAKVLILLTAAAGLALSGDYLRKASLLKFEYPVLVILACVGMMTMVSARDLMVLYLGLELQSLALYVVAAFRRDSLRSTEAGLKYFVLGALSSGLLLYGASLTYGYAGGTGFTAVAASLQGEHIPLGLLFGLVFLSAGMAFKVSAAPFHMWTPDVYEGSPTPVTLFFATAPKVAAAAMFARVLFDAFGGATGDWQQILVFLSIASMFLGAVAAIGQRNIKRLMAYSSITHMGFALMGLAAGTEQGAQALLIYLAIYVTMNVGAFAFILNMEKDGEPVTDIASLGLYSQVAPTRAAALAILMFSMAGVPPLVGFFGKFYVLVAAVDAGLVWLAVAGVIASVIAAYYYLRIVYLMYFGEATEGLDGRMPLVHWGFLGASALAMVVGIVNLFGVEGMAAAAAATLFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU3</accession>
    <name>A0A2M9PFU3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000110">
        <property type="protein sequence ID" value="PJN96389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8488" checksum="69F3CE294D52A6B6" modified="2018-04-25" version="1">MTDPDPGWLTRAVAGREKIIVGLGALLQTYVGAFASFPEPHKGLVIGLIGLAQLWLTADSPKPPPADPVHPDDFTSTPKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU9</accession>
    <name>A0A2M9PFU9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ornithine--oxo-acid transaminase</fullName>
            <ecNumber evidence="1">2.6.1.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">rocD</name>
        <name evidence="1" type="ORF">CNY89_03125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.13" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000125">
        <property type="protein sequence ID" value="PJN96344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050155">
        <property type="term" value="F:ornithine(lysine) transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004587">
        <property type="term" value="F:ornithine-oxo-acid transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8511" checksum="576267F999AE8B1C" modified="2018-04-25" version="1" fragment="single">LEGLRAIRSNRVREVRGRGLMLAVELDEPARPAVEALRELGILAKETHGRTIRFSPPLVITEGEVDWALERIAKVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG69</accession>
    <name>A0A2M9PG69_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_01890</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000069">
        <property type="protein sequence ID" value="PJN96545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006603">
        <property type="entry name" value="PQ-loop_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04193">
        <property type="entry name" value="PQ-loop"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00679">
        <property type="entry name" value="CTNS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="20579" checksum="7D841FBFC66F9DEF" modified="2018-04-25" version="1">MTSLFDAIGLVAAALTTFAFLPQVIQTWRSGSTAGLNLWMLLVLSTGIALWFVYGIGIGEMPVILANGATLVLVAVLLGPQTARAHLIRATSCRRIAARLDTHGFAERRESPLGRLARDLELRAARTGDDEFAHQSIASMVYPSMTIGSLAEPIALSTASICALLMPDLMPATARLRASRLRAIVPGLSPATGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG85</accession>
    <name>A0A2M9PG85_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000072">
        <property type="protein sequence ID" value="PJN96532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036641">
        <property type="entry name" value="HPT_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47226">
        <property type="entry name" value="SSF47226"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14175" checksum="917F0C930E421F37" modified="2018-04-25" version="1">MITKLLRRIYKEKIAIDAERISVLRGAAGEQRTREIVEEVVFHMMERIDLLDCAIETGDAVEAFALAKRMAAMSEQLGLVDFTRVAGDLTLCLDRGDRTAAAAVSARLGRLSESSIVYLINYADRTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF8</accession>
    <name>A0A2M9PGF8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkaline phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000050">
        <property type="protein sequence ID" value="PJN96628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027372">
        <property type="entry name" value="Phytase-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13449">
        <property type="entry name" value="Phytase-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phytase-like" evidence="1">
        <location>
            <begin position="8"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="238" mass="24845" checksum="671CBA0497222FA0" modified="2018-04-25" version="1" fragment="single">GAQDVTREGKPAAGLDLEGIAPDGKGGFWLASEGRTDKDVPHALLRVDAAGAIVEEIAFPEAVLAGETRYGAEGVAQVGDLIWIALQREWKDDPAGTAKLLAYDPAKGDWAGYARYPLDPAPEGGWVGLSEIAASGGDVLFLERDNLIGEAARIKRITRVPASALVPTPFGAAAPPLPKETLRDLIPDLRATGGYVVDKVEGLTVDATGAVFVVTDNDGVDDSSGETMFLPLGKLNAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG2</accession>
    <name>A0A2M9PGG2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01355</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000046">
        <property type="protein sequence ID" value="PJN96643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015840">
        <property type="entry name" value="DNA_MeTrfase_ParB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036758">
        <property type="entry name" value="Aden_M_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="11"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="144"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="427"/>
            <end position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="458" mass="50168" checksum="F6DD80AB659BF4FB" modified="2018-04-25" version="1">MTLSFAPDSIETWPLSRLQPYAKNAKAHGADQVAKIAASMAEFGWTVPCLVGEDGELIAGHGRVLAATQLGLTEAPVIVLGHLTEAQRRAYRIADNKLTELGTWDEALLSAELNDLLAENFDLSLVGFSDHELDKLLAYVAEDDGEEGGAGGSVPPVTIPEPPRNPASRTGDLWILGDHRLLCGDSTSAADVHRLMNGERAILFATDPPYLVDYDGSNHPTRNKDWSASYGTTWDDSSQGAELYDGFIAAAVAEAITEDAAWYCWHASRRQAMLEACWEKAGAFVHQQIIWVKDRGVLTRSHYLWKHEPCFMGWRRPNRPPKVAEQTLPSTWEMPSFAKDERPDHPTPKPLDAFGIPMRQHVARGGLCYEPFSGSGSQIMAGEANGRRVFAMEISPAYVDVAVERWQAETGRDAILDGDGRTFAQVRTERLGNDAEPPADAPDTDAAPEPARKRKTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM0</accession>
    <name>A0A2M9PGM0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF892 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000036">
        <property type="protein sequence ID" value="PJN96689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010287">
        <property type="entry name" value="DUF892"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05974">
        <property type="entry name" value="DUF892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF892" evidence="1">
        <location>
            <begin position="5"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17934" checksum="4A887D3AB90ED87C" modified="2018-04-25" version="1">MAEKTLEALFHEQLRDVYYAERKVAKALPKMARGAQSEALKAAFQKHKEETEGHVERLQQVFEILGKPARGKTCPAIDGILEEGEEVLEEYKGSPALDAGLIASAQAVEHYEMARYGTLTRWAEALGMKDAAKLLSQTLEEEKKTDAALSEMAETAANADAVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN0</accession>
    <name>A0A2M9PGN0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1289 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000036">
        <property type="protein sequence ID" value="PJN96690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010710">
        <property type="entry name" value="DUF1289"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35175">
        <property type="entry name" value="PTHR35175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06945">
        <property type="entry name" value="DUF1289"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7165" checksum="DFEAB25321781258" modified="2018-04-25" version="1">MTRQRRSDPRPVIETPCVRLCVIDPETRLCEGCRRSLDEIAAWGRMTPEQRRAIMDALPGRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP3</accession>
    <name>A0A2M9PGP3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA-directed RNA polymerase subunit</fullName>
            <ecNumber evidence="7">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_00995</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the RNA polymerase beta' chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000034">
        <property type="protein sequence ID" value="PJN96701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.274.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.860.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045867">
        <property type="entry name" value="DNA-dir_RpoC_beta_prime"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000722">
        <property type="entry name" value="RNA_pol_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006592">
        <property type="entry name" value="RNA_pol_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007080">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007066">
        <property type="entry name" value="RNA_pol_Rpb1_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042102">
        <property type="entry name" value="RNA_pol_Rpb1_3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044893">
        <property type="entry name" value="RNA_pol_Rpb1_clamp_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19376">
        <property type="entry name" value="PTHR19376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04997">
        <property type="entry name" value="RNA_pol_Rpb1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00623">
        <property type="entry name" value="RNA_pol_Rpb1_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04983">
        <property type="entry name" value="RNA_pol_Rpb1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00663">
        <property type="entry name" value="RPOLA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7 9" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="3 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="RPOLA_N" evidence="8">
        <location>
            <begin position="237"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="519"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="519" mass="59027" checksum="2341F72C6EBED1AD" modified="2018-04-25" version="1" fragment="single">MNQEVTNPFAPVAPVRAFDEIRISLASPERILSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELASPVAHIWFLKSLPSRIGLMLDMTLRDLERILYFEQYVVIEPGLTDLKAGQLLGEEEYLDAQDRFGEDAFRAGIGAEAIREMLAAIDLDQEAEQLRADLAEATGELKPKKIIKRLKLVESFRESGNRPEWMVLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGLSSTVKQAKKLVEKERPEVWDILDEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGKPIIVPSQDMVLGIYYLSIQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU1</accession>
    <name>A0A2M9PGU1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 16">Cytochrome b</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="ORF">CNY89_01010</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="20 21" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20 21">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 16">Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="16">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="16">Binds 2 heme groups non-covalently.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="15">Binds 2 heme groups non-covalently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="16">The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="16">Belongs to the cytochrome b family.</text>
    </comment>
    <comment type="caution">
        <text evidence="20">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045275">
        <property type="term" value="C:respiratory chain complex III"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008121">
        <property type="term" value="F:ubiquinol-cytochrome-c reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00290">
        <property type="entry name" value="cytochrome_b_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00284">
        <property type="entry name" value="Cytochrome_b_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005798">
        <property type="entry name" value="Cyt_b/b6_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036150">
        <property type="entry name" value="Cyt_b/b6_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005797">
        <property type="entry name" value="Cyt_b/b6_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027387">
        <property type="entry name" value="Cytb/b6-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030689">
        <property type="entry name" value="Cytochrome_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00032">
        <property type="entry name" value="Cytochrom_B_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00033">
        <property type="entry name" value="Cytochrome_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038885">
        <property type="entry name" value="COB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81648">
        <property type="entry name" value="SSF81648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51003">
        <property type="entry name" value="CYTB_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51002">
        <property type="entry name" value="CYTB_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 16" id="KW-0249">Electron transport</keyword>
    <keyword evidence="6 15 16" id="KW-0349">Heme</keyword>
    <keyword evidence="12 15" id="KW-0408">Iron</keyword>
    <keyword evidence="13 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="9 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 16" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="8 16 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5 16" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="95"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="155"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="194"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="253"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="296"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="321"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="354"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="380"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="domain" description="CYTB_NTER" evidence="18">
        <location>
            <begin position="15"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="CYTB_CTER" evidence="19">
        <location>
            <begin position="234"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b562</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b566</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b562</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="15">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <label>b566</label>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="217"/>
        </location>
        <ligand>
            <name>a ubiquinone</name>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR038885-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRSR" id="PIRSR038885-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU003385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="18">
        <source>
            <dbReference type="PROSITE" id="PS51002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="PJN96694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="436" mass="49229" checksum="2BD8D2CBBA0F659D" modified="2018-04-25" version="1">MSGIPHDHYEPKTAPEKWLHSRLPVLGLLYDTLFIPTPKNLNWMWIWGIVLVFCLVMQIVTGIVLVMHYTPNTTLAFSSVEHIMRNVNGGWALRYIHANGASLFFVAVYLHIFRGLYYGSYKAPREITWIIGMLIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPVVGEPIQTLLLGGPAVDNPTLNRFFSLHYLLPFVIAGLVIVHVWAFHTTGNNNPTGVDVRRGSKAEAEADTLPFWPYFVIKDLYALVFVLVIFAVIVGFMPNFLGHPDNYIEANPLSTPAHIVPEWYFLPFYAILRAITFDILFIDSKLGGVLAMFGAIAVMVFVPWLDTSRVRSGRYRPQFKFWFWGLCIDFMLLMWCGGMPAEQPYVIISQLATLYWFGYFLVVLPLLGLTEKPLPLPATIQEDFEAHYDPNAGGTTLVGRPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH42</accession>
    <name>A0A2M9PH42_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046250">
        <property type="entry name" value="DUF6283"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19800">
        <property type="entry name" value="DUF6283"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13827" checksum="C79EE49731CF0932" modified="2018-04-25" version="1">MGAAEGAGVSGWKLKRVRQCAKCPWKVSTDPYEIPDGYSVEAHRALACTIASPGDIRGGGRAMSCHEHLPEDEAHCIGWLMNQLGPGNNIGLRLRMLSCENIRSVRLDGPQHERFEDTLPSEETAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P492</accession>
    <name>A0A2M9P492_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycolate oxidase iron-sulfur subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004853">
        <property type="protein sequence ID" value="PJN92338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5180" checksum="C251D2D6C4FEB02C" modified="2018-04-25" version="1" fragment="single">MAEVRGAGLDAIVVNTSGCGTAQSHAAAGPIVRAWMAEVRGAGLDAIVVNTSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E8</accession>
    <name>A0A2M9P4E8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004615">
        <property type="protein sequence ID" value="PJN92416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8433" checksum="B5CC57FFB70D4A51" modified="2018-04-25" version="1" fragment="single">SASRRRLTEREIAAVLDFADPVDCDPQRIGQLFIRCWRRSSASRRRLTEREIAAVLDFADPVDCDPQRIGQLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M0</accession>
    <name>A0A2M9P4M0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_29180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004328">
        <property type="protein sequence ID" value="PJN92501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="64"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8778" checksum="B237AECED037688F" modified="2018-04-25" version="1" fragment="single">MLYQIVSVEAMLFCILLAGYSVTRVFYPGERPKHRWIAGVAAGIIGGVFMEWPAPPSIDRVASREPAKNGKGADDEHCDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R5</accession>
    <name>A0A2M9P4R5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase_M78 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004265">
        <property type="protein sequence ID" value="PJN92515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="5"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6672" checksum="E2F012AFFC300A82" modified="2018-04-25" version="1" fragment="single">ATVCYDGYAAFVIYNNTHAPVRQASNIAHELAHIVLGHPPLPLIKADGAPRSNFARAFLRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X0</accession>
    <name>A0A2M9P4X0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004114">
        <property type="protein sequence ID" value="PJN92565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9433" checksum="FFE8279889697A33" modified="2018-04-25" version="1" fragment="single">MRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSAPPPVVPSRQGAILNTRFQSQM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P505</accession>
    <name>A0A2M9P505_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003929">
        <property type="protein sequence ID" value="PJN92626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6548" checksum="80A6D7DB18E35A32" modified="2018-04-25" version="1" fragment="single">FWAFAYNTALIPVAAGALYPTFGWLLSPVLAAGAMAMSSVFVLGNALRLKRFRAPMADVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P533</accession>
    <name>A0A2M9P533_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003902">
        <property type="protein sequence ID" value="PJN92639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_3" evidence="1">
        <location>
            <begin position="11"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9224" checksum="9D16ED1F649216D5" modified="2018-04-25" version="1" fragment="single">ARIAARGLDFSAVLAAGDVLAAGAMLGAQQAGYSIPEDISVLGIDDLPQAAFLTPPLTCVHVPKREIGMIALGLLHEALSGPPLPARRVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P594</accession>
    <name>A0A2M9P594_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20110</name>
        <name evidence="1" type="ORF">CNY89_27230</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003675">
        <property type="protein sequence ID" value="PJN92721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001764">
        <property type="protein sequence ID" value="PJN93534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6925" checksum="FFBD90F512090A48" modified="2018-04-25" version="1">MSRGITDMQYRTVHGHRSYAKGGGSSSNNEDWNEDYTTRNGYRIASFWGLYRILDGWFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N6</accession>
    <name>A0A2M9P5N6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20965</name>
        <name evidence="2" type="ORF">CNY89_25930</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003263">
        <property type="protein sequence ID" value="PJN92852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001939">
        <property type="protein sequence ID" value="PJN93418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8641" checksum="AD0CAFA520B84580" modified="2018-04-25" version="1" fragment="single">RAPEGNGCAERFIRTLKENLLWVRTFRTVEELRLALIDFRQTYNECWLIERHGHRSPAQFRRDQMDKIPLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P2</accession>
    <name>A0A2M9P5P2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Benzoate 1,2-dioxygenase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13310</name>
        <name evidence="2" type="ORF">CNY89_26010</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003292">
        <property type="protein sequence ID" value="PJN92843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000857">
        <property type="protein sequence ID" value="PJN94638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000391">
        <property type="entry name" value="Rng_hydr_dOase-bsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41534">
        <property type="entry name" value="PTHR41534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00866">
        <property type="entry name" value="Ring_hydroxyl_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="7090" checksum="5963CAF835BB1026" modified="2018-04-25" version="1" fragment="single">EVDVRYNFHTLNHRYKSTDQFFGTMFVTLRQTDDGLRIAAKKIVLKNDYIRQVIDVYHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R7</accession>
    <name>A0A2M9P5R7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_25785</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003221">
        <property type="protein sequence ID" value="PJN92869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="10"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4605" checksum="DCA8CAE3EDE70D3F" modified="2018-04-25" version="1" fragment="single">MQTNRRNGVSRKTLKSEDGAFEIEVPRDREGSFEPRLIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5U3</accession>
    <name>A0A2M9P5U3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003125">
        <property type="protein sequence ID" value="PJN92907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7139" checksum="169239AAD1D47BF5" modified="2018-04-25" version="1" fragment="single">MDMTRRKFSRAFKIEIVRLVTDRGVAVAQAARDLDAAESVLRRWMRELTATPTTAFPGNGQMGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V7</accession>
    <name>A0A2M9P5V7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003126">
        <property type="protein sequence ID" value="PJN92905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7262" checksum="A9903D6083235B5B" modified="2018-04-25" version="1">MDTGKGKSGGDPFVIAQALAHNPRLVIVTQEAGGSADKPKIPYVCDQERLRHIDLLALIEEEDWTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P620</accession>
    <name>A0A2M9P620_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-asparaginase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_24800</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002932">
        <property type="protein sequence ID" value="PJN92982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004067">
        <property type="term" value="F:asparaginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036152">
        <property type="entry name" value="Asp/glu_Ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006034">
        <property type="entry name" value="Asparaginase/glutaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027475">
        <property type="entry name" value="Asparaginase/glutaminase_AS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027474">
        <property type="entry name" value="L-asparaginase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037152">
        <property type="entry name" value="L-asparaginase_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00710">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001220">
        <property type="entry name" value="L-ASNase_gatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00870">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53774">
        <property type="entry name" value="SSF53774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00917">
        <property type="entry name" value="ASN_GLN_ASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51732">
        <property type="entry name" value="ASN_GLN_ASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Asparaginase" evidence="3">
        <location>
            <begin position="4"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="1">
        <location>
            <begin position="75"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR001220-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="12786" checksum="4976C67ACFBAFA12" modified="2018-04-25" version="1" fragment="single">ATAGATASYEAGKVGVDALIAAVPQIAEVAEVSGEQVFRINSDDFTDAKLVELGKRVSAILKQEDVDGVVVTHGTDTVEETAFFLNLTLKSEKPVVMVAAMRPSTAISADGPLNLLNAVTVAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P644</accession>
    <name>A0A2M9P644_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid encoded RepA protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002807">
        <property type="protein sequence ID" value="PJN93034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006881">
        <property type="entry name" value="RepA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04796">
        <property type="entry name" value="RepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14964" checksum="C5EDF8DE1B5F4F77" modified="2018-04-25" version="1" fragment="single">DTKVVGGFDVWFPKDQRQMVLWPSVVELSLDYFESLQRHAVPLDERAVAALSHSAMALDLYAWLAHRLHRIPKPHRQFIPWPAVKEQFGADFDRLRKFREKFMTALRQVHAVYPAMKIDVTGEGLFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P680</accession>
    <name>A0A2M9P680_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Deoxyribodipyrimidine photolyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_24445</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DNA photolyase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002825">
        <property type="protein sequence ID" value="PJN93025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901363">
        <property type="term" value="F:heterocyclic compound binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097159">
        <property type="term" value="F:organic cyclic compound binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051716">
        <property type="term" value="P:cellular response to stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006139">
        <property type="term" value="P:nucleobase-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036134">
        <property type="entry name" value="Crypto/Photolyase_FAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005101">
        <property type="entry name" value="Cryptochr/Photolyase_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002081">
        <property type="entry name" value="Cryptochrome/DNA_photolyase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018394">
        <property type="entry name" value="DNA_photolyase_1_CS_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11455">
        <property type="entry name" value="PTHR11455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03441">
        <property type="entry name" value="FAD_binding_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00147">
        <property type="entry name" value="DNAPHOTLYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48173">
        <property type="entry name" value="SSF48173"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00394">
        <property type="entry name" value="DNA_PHOTOLYASES_1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0157">Chromophore</keyword>
    <keyword evidence="3 5" id="KW-0274">FAD</keyword>
    <keyword evidence="2 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD_binding_7" evidence="6">
        <location>
            <begin position="14"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="11401" checksum="2F2ED1999F7C5E8A" modified="2018-04-25" version="1" fragment="single">MRLREEVGKGAETFLKELAWREFAWSLLWRWPDMATENWRPDWNAFPWKGDGPEAERWRRGLTGEPMIDAGMREMFVTGRMHNRVRMLVASYLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I1</accession>
    <name>A0A2M9P6I1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002459">
        <property type="protein sequence ID" value="PJN93156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7649" checksum="0A4D2FA6C9A9DEC6" modified="2018-04-25" version="1">MRQSRLMSLVEAWTNVVVGYGIAVLTQMAVFPLFRLDATIGQNLAIGAVFTAISLVRSYALQRLFEAMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J0</accession>
    <name>A0A2M9P6J0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002437">
        <property type="protein sequence ID" value="PJN93166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="77"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="105"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="16442" checksum="8F06A7AAA8936E45" modified="2018-04-25" version="1" fragment="single">PATGALGEPGTHLRRRAGDRRRRLDGQPHDRRARRDAGGSPSRNRQHQGDGPATGDAEPDAQHARLGAVLDEPEPIAWRLVPEHHRPADHGDDPQRQAARHPARGQHSLLRRRRHRQQRHDRDRRHRRGAGRPLLPGRDRSGVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R1</accession>
    <name>A0A2M9P6R1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002364">
        <property type="protein sequence ID" value="PJN93198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="26" mass="2993" checksum="81F132ABB005BD10" modified="2018-04-25" version="1" fragment="single">MRQATIMADALDITRERLLSYVFAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R7</accession>
    <name>A0A2M9P6R7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002322">
        <property type="protein sequence ID" value="PJN93227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5627" checksum="7A65F82C06B3C5C5" modified="2018-04-25" version="1" fragment="single">QILKGLTPYEFIFKRWTIEPERFIVDPIHQMPGIKQLGCEETIGTVPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U8</accession>
    <name>A0A2M9P6U8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_22470</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002296">
        <property type="protein sequence ID" value="PJN93240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16385" checksum="A15331390092C9C2" modified="2018-04-25" version="1" fragment="single">MRAIRDNRDAAEAMGKDVTARHLQVFVLGSAVASPWGRMMRAIRDNRDAAEAMGKDVTARHLQVFVLGSAVVGVAGAMLVTLDGQFTPGSYTPLRYTFIIWVMVIVGGSGNNWGAVLGAPAFREVAASELFEDAVARGHLDVSELFEHNGWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W2</accession>
    <name>A0A2M9P6W2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22385</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002273">
        <property type="protein sequence ID" value="PJN93248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036704">
        <property type="entry name" value="RraA/RraA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89562">
        <property type="entry name" value="SSF89562"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9489" checksum="782576F436330083" modified="2018-04-25" version="1" fragment="single">RIAATDRPLTLPGATGPVTIHPGDWLQGDVDGVVVLPCAFLLQLVEDAEAVGRIERRMRTRILAGEDRQAVYEESPRFAGIRPARPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W4</accession>
    <name>A0A2M9P6W4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20415</name>
        <name evidence="1" type="ORF">CNY89_22110</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002210">
        <property type="protein sequence ID" value="PJN93277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001822">
        <property type="protein sequence ID" value="PJN93493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14434" checksum="3C8CAFFF839932B8" modified="2018-04-25" version="1" fragment="single">MGTLDEMVLAQARAPFTARIGEILRGERATLGRSLLDVQRELKIRAIYIDAIENADPSVFPNKSFIPGYVRSYARYLGLDPEQVTAQFRAETGIEEGGKNGLEGRVRLEGEGGAVEFGPGEAFVVEGGFAGTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P781</accession>
    <name>A0A2M9P781_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_21130</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001976">
        <property type="protein sequence ID" value="PJN93392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7564" checksum="11A4EC445AAC9200" modified="2018-04-25" version="1" fragment="single">MQTNRRNGVSRKTLKSEDGAFEIEVPRDRDGSLTPRLIGKGQTRIDGLDEKIIAMYARGMSVRDIRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G1</accession>
    <name>A0A2M9P7G1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001882">
        <property type="protein sequence ID" value="PJN93449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010775">
        <property type="entry name" value="DUF1365"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33973">
        <property type="entry name" value="PTHR33973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07103">
        <property type="entry name" value="DUF1365"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18672" checksum="248092E11C2AE274" modified="2018-04-25" version="1" fragment="single">LTQPRVLGYGFNPVTFWLACRGEDLVAVIAEVGLGPEGVGLRLLTQPRVLGYGFNPVTFWLACRGEDLVAVIAEVDNTFGDRHCYFCARPGFAPIGREDRLHAEKVFHVSPFQAIAGGYAFTFDIGPDRIDIRILHHNGERAAGGDAVQHGELPVLVGWSETDRYETVYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N4</accession>
    <name>A0A2M9P7N4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001763">
        <property type="protein sequence ID" value="PJN93535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="21202" checksum="E72E181F4102EE57" modified="2018-04-25" version="1" fragment="single">ASDRHGVTDERHVANILAQVHHETDGTMMPEVENLTYTTTERLRKVWPSRFPTDASAAPYVRNPEALAIKVYGDRLGNRAGTRDGWLYRGQGQIQPTGRGHFQTFGDLLGVDLVGNPERALELEISAEIAVVGMARGLFTGKSLGDYFSATRDDPAAARAIVNGDVRVNGPRIATLHRAFPGRPAGRPGRPGPVPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S4</accession>
    <name>A0A2M9P7S4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Alkylated DNA repair dioxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_19765</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001689">
        <property type="protein sequence ID" value="PJN93583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004574">
        <property type="entry name" value="Alkb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027450">
        <property type="entry name" value="AlkB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037151">
        <property type="entry name" value="AlkB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005123">
        <property type="entry name" value="Oxoglu/Fe-dep_dioxygenase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR16557">
        <property type="entry name" value="PTHR16557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13532">
        <property type="entry name" value="2OG-FeII_Oxy_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51471">
        <property type="entry name" value="FE2OG_OXY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe2OG dioxygenase" evidence="6">
        <location>
            <begin position="21"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13565" checksum="A23E80D87A1201E4" modified="2018-04-25" version="1" fragment="single">WPPIPEARARLWRDLATAGRDPDSCLVNWYGETARMGLHRDSDEAEFRWPVLSISLGDTAIFRMGGPERRDPTASVTLESGDVVVMSGSARLAYHGIDRIRFGSSRLLPQGGRINLTCRVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E9</accession>
    <name>A0A2M9P8E9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF3072 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001438">
        <property type="protein sequence ID" value="PJN93804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021425">
        <property type="entry name" value="DUF3072"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11272">
        <property type="entry name" value="DUF3072"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9380" checksum="065B26866454C1AE" modified="2018-04-25" version="1">MIDDPDDATPSKTGSPDPAEYSNTSKNPADWVTGDEPMTGAQASYLKTLCEEAGVEFDEGLTKAAASERIDQLKAEVPRLGGKAGAPPQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G2</accession>
    <name>A0A2M9P8G2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001429">
        <property type="protein sequence ID" value="PJN93813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5635" checksum="A10582BC86BBAC92" modified="2018-04-25" version="1" fragment="single">DYLLRVLVRDMAALQDFIVDELTRIPGVANIRSSFALKQAKYTTALPVSPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P5</accession>
    <name>A0A2M9P8P5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17725</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001364">
        <property type="protein sequence ID" value="PJN93900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040072">
        <property type="entry name" value="Methyltransferase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30544">
        <property type="entry name" value="PTHR30544"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="6">
        <location>
            <begin position="73"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="26796" checksum="5C15F32859D9A61C" modified="2018-04-25" version="1" fragment="single">MRIEQVWQWIYHRGLRDFSEMTNLAKDLRTRLADQFMLERPEVVERQISADGTRKYLLRVAGGGEIETVYIPEADRGTLCVSSQIGCTLTCSFCHTGTQRLVRNLTAAEIVGQILVARDDLGDWNRSGPEKRLISNVVLMGMGEPLYNFEAVRDAMRIAMDGAGLALSRRRITLSTSGVVPEIARVGEEIGCLLAISFHATTDPVRDQLVPINRKWNIAALLDACRAYPRLSNSERITF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R2</accession>
    <name>A0A2M9P8R2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001353">
        <property type="protein sequence ID" value="PJN93909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005496">
        <property type="entry name" value="Integral_membrane_TerC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022301">
        <property type="entry name" value="Integral_membrane_YjbE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03741">
        <property type="entry name" value="TerC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03717">
        <property type="entry name" value="R_switched_YjbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="23921" checksum="64BE1B4AEEA83EA0" modified="2018-04-25" version="1" fragment="single">MLETGFLTAFLQVIMIDLVLAGDNAIVIGMAAAGLPADMRKKAIIIGIGAATVMRICFALIATELLAITGLLLAGGLLLLWVCWKMYEELRVSRHQEDQAVEALEGLGADSNGPARKTLRQAVTQIIIADVSMSLDNVLAVAGAAHEHPIVLVAGLALSIALMGLASTFIAGLLHKHRWIGWVGLLVILYVALNMVWHGWEDVATHGIPLFGIEAPFPAEGAPPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U2</accession>
    <name>A0A2M9P8U2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001320">
        <property type="protein sequence ID" value="PJN93944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="21976" checksum="899CE2D275950D94" modified="2018-04-25" version="1" fragment="single">MITPLAEPCADPFDVMLPLRVARWVLRHYANDFGTFDHEQPKAAFVNRLQTRWSKRTTTADIHAAVDQLTALGAFHVYDRQSIRPGRYGRSSVQMLRPSKVGCKAAEDQLNAMRLATPNPSRTKGTFVPNYMAFVLKQHNVPAHERRACATYIIDHVVRPYLEAQGYPRLPDEQVDSYRPRGPVAAPAPVVVAQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z3</accession>
    <name>A0A2M9P8Z3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001265">
        <property type="protein sequence ID" value="PJN94016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029465">
        <property type="entry name" value="ATPgrasp_TupA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14305">
        <property type="entry name" value="ATPgrasp_TupA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="25821" checksum="C314AC38D2A5274B" modified="2018-04-25" version="1" fragment="single">MFLKALWRRLKTLIVPDYILARRQYRHRNGVYPDLANPKNLSEKVLWLKLRDQSPLHTFCADKIQVRDYVSHRIGASYLVPALLATYQVDRITPETIQERRFVIKTNHDQGGVFICLDRDGVDWPAIRAALRARLKANKYYEYQERQYKHIRPGVLVERFVEIDPGSVPVEIKVNCFEGAPRVIQVILDRFGRRRQAFYDETWRRLPMHGRAEPAEPLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P926</accession>
    <name>A0A2M9P926_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">PQQ-dependent dehydrogenase, methanol/ethanol family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_16830</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial PQQ dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001244">
        <property type="protein sequence ID" value="PJN94044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001479">
        <property type="entry name" value="Quinoprotein_DH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13360">
        <property type="entry name" value="PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00364">
        <property type="entry name" value="BACTERIAL_PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0634">PQQ</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="328"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="328" mass="36368" checksum="FB4B32729CE3BA29" modified="2018-04-25" version="1" fragment="single">PTFANDSVLELTQNPKQWAAQLGDYAGTRYSKLDQINAGNVGDLQVAWSFSTGVLRGHEGSPLVIDNMMYVHTPFPNTVYALDLSQEGKIVWRYHPEQDPNVIGVMCCDTVNRGLAYSDDTIFLHQADTTLVALDAKTGAVKWSVKNGDPAKGETNTATVLPVKDKVLVGISGGEYGVRGHITAYNIADGSLAWRAYSTGPDDEMLVDPEKTMVLGKPIGKDSSLNSWEGDQWQIGGGTTWGWYTYDPELDLVYYGTGNPSTWNPSQRPGDNKWSMTIMARDPDTGMAKWFYQKTPHDEWDFDGVNENILADKEIDGKMRKILVNFDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P942</accession>
    <name>A0A2M9P942_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glutamine synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_16710</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamine synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001227">
        <property type="protein sequence ID" value="PJN94066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="4">
        <location>
            <begin position="114"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="26868" checksum="E26302E677AE2ECC" modified="2018-04-25" version="1" fragment="single">MLDTATALAWLDSRPDITSLRAAVCDLNGILRGKRVPVAQARKVLEGQMRMPYSIAFLDIWGEDVADNPLVWKQGDVDGRCTPTGRGFLPMDWLGTPSALMPLMLVEEDGAPYLGDPRQALAAVVARFAERGLTPVVATELEFYLVDTSGDEPTPPKSPVTHKLLDGDGALCIDDLDHFEAFFTDVYAACDAHGIPVDSAISENGGGQFEINLLHVADPLKAADDALYFKRFVKGIARRYGLAASFMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P971</accession>
    <name>A0A2M9P971_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001207">
        <property type="protein sequence ID" value="PJN94096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21213" checksum="F62B51ADEBEC3A4C" modified="2018-04-25" version="1" fragment="single">ERASQDLIAPIDAIAARIQQVVTELGAGVVEMRRMSDAVRSGAEAGETAAGTFRAASQTLVGAAQPVRETSERIAASLQALTESTQSVAGTVSRSAERVATTAAATLENAGAVLGAERLAIDTALARLLDVIQAQKGQGDRLDAMDLKLGKAFEIYRTEVEAAVAGMNGHVKTMSTDMNRALDTMRGIIDSLTEFQPQSRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C1</accession>
    <name>A0A2M9P9C1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001180">
        <property type="protein sequence ID" value="PJN94131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="92"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11488" checksum="01AC4435F37C4F14" modified="2018-04-25" version="1" fragment="single">FAWIFLGAPYIEGLRGNRSVAAALTVVSAAVVGVILNLAIWFAIHVIFRAVVSVEAGPLSLDLPVPGSIDWLAASLAVFALFAVFRLKIGMGMALGGSAVLGVGLWLIGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D4</accession>
    <name>A0A2M9P9D4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001179">
        <property type="protein sequence ID" value="PJN94132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="48"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8321" checksum="67943372C0A76B58" modified="2018-04-25" version="1" fragment="single">GYDEGRANQLTVYLTQRAALKVSQDRRHAALRDAWAEHNAARKTALVQGHARGQAPARSQAQDMGHRLYRDPEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F8</accession>
    <name>A0A2M9P9F8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DeoR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16075</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001150">
        <property type="protein sequence ID" value="PJN94173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014036">
        <property type="entry name" value="DeoR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001034">
        <property type="entry name" value="DeoR_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00455">
        <property type="entry name" value="DeoRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08220">
        <property type="entry name" value="HTH_DeoR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00037">
        <property type="entry name" value="HTHLACR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00420">
        <property type="entry name" value="HTH_DEOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51000">
        <property type="entry name" value="HTH_DEOR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH deoR-type" evidence="3">
        <location>
            <begin position="3"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="259" mass="28063" checksum="B56DE66B8D025F59" modified="2018-04-25" version="1">MAQNFRHSEILTIAREAGKVTVEGLAAHFNVTAQTIRRDLTELCDIGQLTRVHGGAMIPSGVIALGYEDRRSLASVEKDAIARMVAEQIPDGVSLFMNIGTTTEAVARALLKHRNMMIITNNLNVANILAQSPNVEVIVAGGILRRADGALVGDVTAEFIGQFKVDYAIISSAAVDPDGSLLDYDFREVRVAQAIIKNARKSYLVADQTKFKMAAPVRIASLADLDGFFTDIAPPKSILQLCADNDVFIRTVEHSGRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H7</accession>
    <name>A0A2M9P9H7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15935</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001132">
        <property type="protein sequence ID" value="PJN94198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8389" checksum="2821D5A6637A7253" modified="2018-04-25" version="1" fragment="single">PQIASTNPLERVNREIKRRADVVGIFPNDDAIIRLVGALMLETNDEWAVARRYMSLETLAKVTNTENLRLPAVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M2</accession>
    <name>A0A2M9P9M2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001118">
        <property type="protein sequence ID" value="PJN94222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3737" checksum="0EAB0D7B34D03F43" modified="2018-04-25" version="1" fragment="single">MKWDDLRVFLAVARHSGLQAAGRVLSLDPATVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N5</accession>
    <name>A0A2M9P9N5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HNOB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001097">
        <property type="protein sequence ID" value="PJN94245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038158">
        <property type="entry name" value="H-NOX_domain_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011644">
        <property type="entry name" value="Heme_NO-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024096">
        <property type="entry name" value="NO_sig/Golgi_transp_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07700">
        <property type="entry name" value="HNOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111126">
        <property type="entry name" value="SSF111126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNOB" evidence="1">
        <location>
            <begin position="27"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="22153" checksum="7DDEEA640DEFC4F4" modified="2018-04-25" version="1">MKELRDRQSAGAGPAPLAGPVAGGAMYGMIHQAARDFALSRLGPEQWEGLLETGGLSGRQFIGVEYYSDEETMRIVSLIGDRLGLDMTETFRQLGGAWVDFAGASTYGRVLQMAGDDLETFLSNLDRMHASIKSNMPKAALPGFEVVSSGGDAIRVQYRSERRGLAPFVQGILASVAQRFGETLDVSYVETEGGALFTLARRRAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R0</accession>
    <name>A0A2M9P9R0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Dihydrolipoyl dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_15455</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001076">
        <property type="protein sequence ID" value="PJN94276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006256">
        <property type="entry name" value="AcTrfase_Pyrv_DH_cplx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43178:SF2">
        <property type="entry name" value="PTHR43178:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="3">
        <location>
            <begin position="3"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="8693" checksum="8C1D6A588A07E5E6" modified="2018-04-25" version="1" fragment="single">MAQIEVKVPDIGDFSDVPVITVFVKAGDTVAVDDSLLELESDKATMEVPAPSAGKVVEVKVKEGDRVGEGAVILILEAEGAAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S0</accession>
    <name>A0A2M9P9S0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1-acyl-sn-glycerol-3-phosphate acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001080">
        <property type="protein sequence ID" value="PJN94269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="27"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="27" mass="3129" checksum="9FEFC666B102A4D5" modified="2018-04-25" version="1" fragment="single">MLYDRLGRVCIPAATNVGVFWSRRSPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X4</accession>
    <name>A0A2M9P9X4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001041">
        <property type="protein sequence ID" value="PJN94335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="20"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14832" checksum="3AD30B22C451D301" modified="2018-04-25" version="1">MTRTDEKVGYLPTGKDLYPTPDAAASGVEGALRMLEGRWKLTILFQLFGGKTLRFSELERAIPGVSQKMLIQQLRQMEADGIVRRIVHHQVPPKVEYRLTDWGRALCPALDALLVWASARPGDGPEDFRQGTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y8</accession>
    <name>A0A2M9P9Y8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001034">
        <property type="protein sequence ID" value="PJN94347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026325">
        <property type="entry name" value="DUF932"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06067">
        <property type="entry name" value="DUF932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19864" checksum="72FC8EE28BF563F1" modified="2018-04-25" version="1" fragment="single">VNANDGTSAYQMIPGFFRMVCANGLMTGETFNEVKVRHSGDAVGAVIEGAFQVLEDAPRVTEQVAGFKAVTLSEGERGVFAEAAHVLRFPKAHETVPSPAPIAPEALLRPRRAADRGADLWSAFNVIQENVIRGGQRGQVVAANGARRRASVREVTGIDQSRALNRALWVLTERMAELRSNAEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA04</accession>
    <name>A0A2M9PA04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14865</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001016">
        <property type="protein sequence ID" value="PJN94378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001761">
        <property type="entry name" value="Peripla_BP/Lac1_sug-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00532">
        <property type="entry name" value="Peripla_BP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="300" mass="32985" checksum="91C8C8D26106763A" modified="2018-04-25" version="1" fragment="single">MKTQTDIARAAGVSLKTVSRVVNGDPLVKPETRDRIERIFREMNYQPSVAARLMRAKKSDIVGFLADGVATSGASSDLIRGAQDEAWTLGKQMMLFNIREGEASETNAEAQLVQFRAEAVIFAAIAHRAVRPLEGATPRILLNCYDPEGRATAFVPDDEGMCRDLMAQVFARGYRRPYFLNLSYDHEAAHLRRAGFVKAGAEAGLDLSDRVRPVIEKTPTGHSFHVERHMAEILTLPDRPDILICGQDIIAMEVYFALARAGLAVGRGLGQAHGEDEDLHLGEELAHAGQMVTALRDHLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA26</accession>
    <name>A0A2M9PA26_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001008">
        <property type="protein sequence ID" value="PJN94395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014786711" evidence="1">
        <location>
            <begin position="30"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7909" checksum="201C466D2D431C84" modified="2018-04-25" version="1" fragment="single">MPKTRLSAALALVLVATAAAQTVAAQAQAAAEAPVQPDLADLLWVARPLVVFADSPQDPRYVQQMELLDAGAAVLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE6</accession>
    <name>A0A2M9PAE6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000936">
        <property type="protein sequence ID" value="PJN94507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7026" checksum="28244F68E6CB29A7" modified="2018-04-25" version="1">MYQTIQLSSCVSVQGEFVERLCDGQVLIRDGKTMYRGRPIQRGAAAEVSIGAIARASERPVRSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ9</accession>
    <name>A0A2M9PAQ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GfdT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000873">
        <property type="protein sequence ID" value="PJN94616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019494">
        <property type="entry name" value="FIST_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10442">
        <property type="entry name" value="FIST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FIST_C" evidence="1">
        <location>
            <begin position="3"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="11985" checksum="FF5CF273855BFBD6" modified="2018-04-25" version="1" fragment="single">APGGGLAMMSSVEPGTAMTIGRPASLTGGLEARMSGLGRIALILGFDCILRRIALEQAGLGETVARIYRDHRVAGFNTYGEQHGGLHVNQTFVGLAFLEPDAKPDPRSGRGHAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV1</accession>
    <name>A0A2M9PAV1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000847">
        <property type="protein sequence ID" value="PJN94652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022742">
        <property type="entry name" value="Hydrolase_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12146">
        <property type="entry name" value="Hydrolase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_4" evidence="1">
        <location>
            <begin position="24"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="306" mass="34015" checksum="65E632CCC62288F9" modified="2018-04-25" version="1" fragment="single">MPEVLVGGHRVSFRLDGPADGPVFAFVNGLTQYSDLWAAYAAHLSGRGMRVLRFDMLGQGASDKPALGVRFEDHWRTLEAILDHLGAERAHVAGISFGGTVALQFACERPERCASLVAMSCFAEMPPQLHRLGCGLYESLVEIGLPALQRWLMPMNMSDDWLAANRDAIPQMMRRGYAVNDLFALQNLMESVTGFEPITDRLGRISCPVMILNGEYDFFTPRKCHEVLRREIARSRLVIVQHAYHAFTLEHPAVTLRLIDAFLDHVEAGTWPGDRTVWIASDDAAAPEPWFPCVGDHLRAIPLPPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY5</accession>
    <name>A0A2M9PAY5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">UPF0301 protein CNY89_12955</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12955</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the UPF0301 (AlgH) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000823">
        <property type="protein sequence ID" value="PJN94698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00758">
        <property type="entry name" value="UPF0301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003774">
        <property type="entry name" value="UPF0301"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30327">
        <property type="entry name" value="PTHR30327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02622">
        <property type="entry name" value="DUF179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="20216" checksum="BB95BB8900BECAA3" modified="2018-04-25" version="1">MKPAEPSFLDGQLLIAMPAMGDLRFARAVIFVCAHSAEGAMGLIVNKPAPDLRFADLLKQLKIAPSPEVADTRVHFGGPVEHGRGFVLHTGEYAVEGASLRVNDAFAMTATVDILQDMARGEGPERAILALGYSGWGPGQLEGEIQANGWLVAPADADLVFGSRDAEKWEGALRRISIDPRLLSAEGGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB15</accession>
    <name>A0A2M9PB15_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000813">
        <property type="protein sequence ID" value="PJN94715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003313">
        <property type="entry name" value="AraC-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037923">
        <property type="entry name" value="HTH-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02311">
        <property type="entry name" value="AraC_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51215">
        <property type="entry name" value="SSF51215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AraC_binding" evidence="1">
        <location>
            <begin position="22"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15521" checksum="43C8A4CE68570324" modified="2018-04-25" version="1" fragment="single">MKPDLEVVQIGRAESFKAWEHGYPFRTVRWHFHPEFELHHVVATSGRYFIGDFIGTFEPGNLVLTGPNLPHNWVSDATEAPVRSRVVQFSEPFITQAMALMPELAGFGCVLERSRRGVLFGPEAACVGPMLAELVQARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB51</accession>
    <name>A0A2M9PB51_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000785">
        <property type="protein sequence ID" value="PJN94764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10507" checksum="3687EEC5DE04B678" modified="2018-04-25" version="1">MTSPVRFDWTFNFGHVLTVAAVLGAAAFGYVDLQRDVQDHDRRIGTAETLIAQAHARLAQQDVIEAGTRAQIDGIDRLMGEVRDELKTMNRRNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB88</accession>
    <name>A0A2M9PB88_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12405</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000773">
        <property type="protein sequence ID" value="PJN94785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13396" checksum="9352E26088F9BEC5" modified="2018-04-25" version="1" fragment="single">PVWNRIRKLRAAGVIRAEVALLDPEKIGLDTCFFVLIRTAQHDSDWLARFLRAVQDRPEVLEAHRLAGDIDYILKVRVPNARAYDTFYQALIKEVSIFNVTSSLSMEEIKSTTALPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB8</accession>
    <name>A0A2M9PBB8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Dihydrodipicolinate synthase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000745">
        <property type="protein sequence ID" value="PJN94830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009334">
        <property type="entry name" value="DUF993"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06187">
        <property type="entry name" value="DUF993"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="343" mass="37517" checksum="A93CCDB8C7267A2F" modified="2018-04-25" version="1" fragment="single">PLRERAPWEGRPAVDWENTLGFRRWLWDQGLGLAEAMDTAQRGMGVDWLTAKELIERTMVEARAHPLKPRVACGAGTDQRAPGEIRTEADLIAAYSEQMEAIEAAGGQVILMASRAFPGIDADAGTYARVYGRLLDQAAQPVILHWLGDMFDPGLRGYWGSSDVAAASDTVLAIIEDNAAKVDGIKISLLDQAHEEAFRARLPEGVRLYTGDDFNYAALIEGDGTRYSHALLGAFTAIAPAAVQALEALAEGDPARYHALLAPTVPLSREIFKAPTRFYKAGIAFLAWLNGAQSHFIMPAGFQSSREITHYAEVLRRADAARLLNRPDLAEERMTLLLKLHGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE8</accession>
    <name>A0A2M9PBE8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dihydrolipoyllysine-residue acetyltransferase</fullName>
            <ecNumber evidence="4">2.3.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_11935</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:17017"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="2.3.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.12" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000726">
        <property type="protein sequence ID" value="PJN94863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:acetyl-CoA biosynthetic process from pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045257">
        <property type="entry name" value="E2/Pdx1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23151">
        <property type="entry name" value="PTHR23151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="8" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="7">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="83"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="12854" checksum="CFEC6D48DFAB3E74" modified="2018-04-25" version="1" fragment="single">MPINILMPALSPTMEEGTLSKWLVKEGDKVASGAVMAEIETDKATMEFEAVDEGVIGKILVTEGTEGVKVNDVIAILLEEGESASDIEDEAPAPAAAPETKAPKAEAPEKSPEIAPAPQAALAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ3</accession>
    <name>A0A2M9PBJ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000705">
        <property type="protein sequence ID" value="PJN94900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7901" checksum="9877BAEB6472121C" modified="2018-04-25" version="1" fragment="single">ATGQGEEAVPARLIDVEDRGAFRIADIAIGANRLRMRIGERDWLPADGLKVAFRPEATLLYANDRLLEGTHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ6</accession>
    <name>A0A2M9PBJ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptidoglycan-associated lipoprotein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11655</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000703">
        <property type="protein sequence ID" value="PJN94908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006664">
        <property type="entry name" value="OMP_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01021">
        <property type="entry name" value="OMPADOMAIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="1 2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpA-like" evidence="3">
        <location>
            <begin position="48"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="14753" checksum="2ECFC0C54B646DDE" modified="2018-04-25" version="1">MALAMAGCARPPIDTGAGFSGGGAGPGAGMGAGLDGTDPYGAGAVTGGTLPGSNISDRVLFAVDTTTLSPQAMAILDQQIGWLLANPGAIEIEGHADERGTEQYNIQLGARRAASVRDYMVARGVPDSRLSTNTFGGAIPRSSCRST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP6</accession>
    <name>A0A2M9PBP6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Type II secretion system protein I</fullName>
            <shortName evidence="5">T2SS minor pseudopilin I</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">gspI</name>
        <name evidence="7" type="ORF">CNY89_11355</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Component of the type II secretion system required for the energy-dependent secretion of extracellular factors such as proteases and toxins from the periplasm.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Type II secretion is composed of four main components: the outer membrane complex, the inner membrane complex, the cytoplasmic secretion ATPase and the periplasm-spanning pseudopilus.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell inner membrane</location>
            <topology evidence="5">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="5">Cleaved by prepilin peptidase.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the GSP I family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000676">
        <property type="protein sequence ID" value="PJN94955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015627">
        <property type="term" value="C:type II protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015628">
        <property type="term" value="P:protein secretion by the type II secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012902">
        <property type="entry name" value="N_methyl_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045584">
        <property type="entry name" value="Pilin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003413">
        <property type="entry name" value="T2SS_GspI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010052">
        <property type="entry name" value="T2SS_protein-GspI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38779">
        <property type="entry name" value="PTHR38779"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07963">
        <property type="entry name" value="N_methyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02501">
        <property type="entry name" value="T2SSI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54523">
        <property type="entry name" value="SSF54523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01707">
        <property type="entry name" value="gspI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02532">
        <property type="entry name" value="IV_pilin_GFxxxE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00409">
        <property type="entry name" value="PROKAR_NTER_METHYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0488">Methylation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SSI" evidence="6">
        <location>
            <begin position="42"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU368030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="12961" checksum="478529A7ECFC087C" modified="2018-04-25" version="1">MAREGEAGFSLIEALVALAILAVAAISLLTATEAHVARIAGLESRALAQIAAENRLAELELGLVGDDMVTLLGHRFVIDVTRGGTADPEVERIDVAVTDMARAETFRGVFGFLASPAGGTGSGEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ0</accession>
    <name>A0A2M9PBQ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">K+/H+ antiporter subunit F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_11295</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 8">Cell membrane</location>
            <topology evidence="2 8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000672">
        <property type="protein sequence ID" value="PJN94963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015075">
        <property type="term" value="F:ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007208">
        <property type="entry name" value="MrpF/PhaF-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34702">
        <property type="entry name" value="PTHR34702"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04066">
        <property type="entry name" value="MrpF_PhaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028784">
        <property type="entry name" value="MrpF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0050">Antiport</keyword>
    <keyword evidence="4 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="63"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009212"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR028784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10269" checksum="19AF4DC51B54E222" modified="2018-04-25" version="1">MSALILTWSVAFALVLLVAAMVCATWRILIGPRAQDRVLALDALYVTTMLLFVTLGVRTGSVFFFEASLVIAVMGFVATVALAKFLMRGEVIEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX9</accession>
    <name>A0A2M9PBX9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">30S ribosomal protein S7</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rpsG</name>
        <name evidence="11" type="ORF">CNY89_10750</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the universal ribosomal protein uS7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000627">
        <property type="protein sequence ID" value="PJN95056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.455.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00480_B">
        <property type="entry name" value="Ribosomal_S7_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000235">
        <property type="entry name" value="Ribosomal_S5/S7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005717">
        <property type="entry name" value="Ribosomal_S7_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020606">
        <property type="entry name" value="Ribosomal_S7_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023798">
        <property type="entry name" value="Ribosomal_S7_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036823">
        <property type="entry name" value="Ribosomal_S7_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11205">
        <property type="entry name" value="PTHR11205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00177">
        <property type="entry name" value="Ribosomal_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002122">
        <property type="entry name" value="RPS7p_RPS7a_RPS5e_RPS7o"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47973">
        <property type="entry name" value="SSF47973"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01029">
        <property type="entry name" value="rpsG_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00052">
        <property type="entry name" value="RIBOSOMAL_S7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 7 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7 9" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S7" evidence="10">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00480"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="17931" checksum="5DA0C3A791823407" modified="2018-04-25" version="1">MSRRHSAEKREVLPDAKFGDRVLTKFMNNLMYAGKKSVAEGIVYGALDRVEKKVRRAPIEIFHEALDNIKPSVEVRSRRVGGATYQVPVEVRPERREALAIRWLIKASRARNEHTMEERLAGELMDAANSRGTAVKKREDTHKMADANKAFSHYRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY6</accession>
    <name>A0A2M9PBY6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10755</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 6">Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="1 6">With S4 and S5 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts proteins S8 and S17. May interact with IF1 in the 30S initiation complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the universal ribosomal protein uS12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000627">
        <property type="protein sequence ID" value="PJN95057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03368">
        <property type="entry name" value="Ribosomal_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006032">
        <property type="entry name" value="Ribosomal_S12/S23"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005679">
        <property type="entry name" value="Ribosomal_S12_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11652">
        <property type="entry name" value="PTHR11652"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00164">
        <property type="entry name" value="Ribosom_S12_S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002133">
        <property type="entry name" value="Ribosomal_S12/S23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01034">
        <property type="entry name" value="RIBOSOMALS12"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00981">
        <property type="entry name" value="rpsL_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00055">
        <property type="entry name" value="RIBOSOMAL_S12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="6" id="KW-0820">tRNA-binding</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015690"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00024962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12658" checksum="C1E2E57F384CB279" modified="2018-04-25" version="1" fragment="single">QPRVVRSKSMHLQACPQKRGVCTRVYTTTPKKPNSAMRKVAKVRLTNGFEVISYIPGESHNLQEHSVVLIRGGRVKDLPGVRYHILRGVLDTQGVKNRRQRRSKYGAKRPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC24</accession>
    <name>A0A2M9PC24_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9 10">Transaldolase</fullName>
            <ecNumber evidence="5 9 10">2.2.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">tal</name>
        <name evidence="11" type="ORF">CNY89_10635</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9 10">Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9 10">
            <text>D-glyceraldehyde 3-phosphate + D-sedoheptulose 7-phosphate = beta-D-fructose 6-phosphate + D-erythrose 4-phosphate</text>
            <dbReference type="Rhea" id="RHEA:17053"/>
            <dbReference type="ChEBI" id="CHEBI:16897"/>
            <dbReference type="ChEBI" id="CHEBI:57483"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="2.2.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9 10">Carbohydrate degradation; pentose phosphate pathway; D-glyceraldehyde 3-phosphate and beta-D-fructose 6-phosphate from D-ribose 5-phosphate and D-xylulose 5-phosphate (non-oxidative stage): step 2/3.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 9 10">Belongs to the transaldolase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.2" evidence="5 9 10"/>
    <dbReference type="EMBL" id="PHNO01000617">
        <property type="protein sequence ID" value="PJN95079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00414"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004801">
        <property type="term" value="F:transaldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00957">
        <property type="entry name" value="Transaldolase_TalAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00492">
        <property type="entry name" value="Transaldolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001585">
        <property type="entry name" value="TAL/FSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004730">
        <property type="entry name" value="Transaldolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018225">
        <property type="entry name" value="Transaldolase_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10683">
        <property type="entry name" value="PTHR10683"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10683:SF18">
        <property type="entry name" value="PTHR10683:SF18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00923">
        <property type="entry name" value="TAL_FSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00874">
        <property type="entry name" value="talAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01054">
        <property type="entry name" value="TRANSALDOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00958">
        <property type="entry name" value="TRANSALDOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9 10" id="KW-0570">Pentose shunt</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0704">Schiff base</keyword>
    <keyword evidence="6 9 10" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001469"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="311" mass="33930" checksum="7088250A26904CAF" modified="2018-04-25" version="1">MTSRLDQLREMTVVVADTGDLTAVAELKPQDCTTNPSLVLKAIDQPGFAEQFDRAIRENKGDSEAVADDLTVSLGVELTKLVPGRVSTEVDARYSFDIDASLAKARSLIEAYDDRGVGRDRILIKLAATWEGIRAAQILQAEGVDCNLTLIFSIAQAQACADAGVFLISPFVGRITDWHSKSTGKTYGPEEDPGVLSVRKIYDYYKSNDIKTIVMGASFRNVGQVTALAGCDRLTISPNLLSELAADETPLTRVLSPDMATGVPRVSMKEPDFRWAMNEDQMATEKLSEGIRNFHADSLKLLRLIETARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC40</accession>
    <name>A0A2M9PC40_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000612">
        <property type="protein sequence ID" value="PJN95088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12680">
        <property type="entry name" value="SnoaL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="16"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12680"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="367" mass="40675" checksum="F6B984301084A822" modified="2018-04-25" version="1" fragment="single">MLDESPSVTLDMVLADLNAALAAGDVEAAVNLFQDDCYWRDLAAITWNLKTVEGKAQVRDMLTAQLGAVKPQGFVQAEGEVATQSGEVTEGWIRFETETGRGCGQIRLKNGKIWTLLTALEELKGHEEPKGLRRPMGAEHGHDRNRMTWSEKRAQEAAELGYKTQPYVLVIGGGQGGIALGARLRQMGVSTIVVDKHERPGDQWRKRYKSLCLHDPVWYDHLPYIPFPENWPVFTPKDKIGDWLESYTKIMELNYWSSTTAKKAEWDEAAQEWVVTVDRAGEEVVLRPKQLVFATGMSGKANVPVIPGQDVFKGEQQHSSQHPGPDAYAGKKVVVIGSNNSAHDICAALWEAGADVTMLQRSSTHIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC62</accession>
    <name>A0A2M9PC62_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000589">
        <property type="protein sequence ID" value="PJN95131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01007">
        <property type="entry name" value="TRANSPOSASE_MUTATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="28387" checksum="BAD0477583A67324" modified="2018-04-25" version="1" fragment="single">RVKIRDKDSRIVKNKAVYLALGITGDGEREVLGLWIAESWRGHKTVRGTVLPDNGAKFWLSVMTELRNRGVQDILIAVVDGLKGFPEAITAAFPQTMVQTCVVHLVRHSLNFCSWKDRKAVAAKLREVYVAETAEAARDALEAFDADWGRQYPSIAQAWRRAWQEVIPFFAFSPEIRRVIYTTNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC74</accession>
    <name>A0A2M9PC74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Signal recognition particle-docking protein FtsY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_10380</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
            <orientation evidence="1">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000596">
        <property type="protein sequence ID" value="PJN95118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004390">
        <property type="entry name" value="SR_rcpt_FtsY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43134:SF7">
        <property type="entry name" value="PTHR43134:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SRP54" evidence="5">
        <location>
            <begin position="1"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16998" checksum="4804C27FD250B400" modified="2018-04-25" version="1" fragment="single">EQLQIWGNRAGVPVMTAAQGSDPASLAYDAMARAEAEGADLLLIDTAGRLQNREDLMQELAKIVRVIRKRDPEAPHNTLLVLDASTGQNALSQVEIFRKIADVTGLVMTKLDGTAKGGVLVALADRFGLPIHAIGLGEQIDDLAPFDPEDFARALTGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG6</accession>
    <name>A0A2M9PCG6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DDE_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000539">
        <property type="protein sequence ID" value="PJN95236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038717">
        <property type="entry name" value="Tc1-like_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13358">
        <property type="entry name" value="DDE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <feature type="domain" description="DDE_3" evidence="2">
        <location>
            <begin position="15"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="20691" checksum="53975ECA6F6DBEEC" modified="2018-04-25" version="1">MAEVRAAHPGKRIELWWQDEARIGQKNKLTRRWARRGTRPRAPHDQRNAWAYLFGAICPAEGKGAGLVMPFCDTEAMQAHLAEISTMVAHGAHAVLLLDQAGWHLAGALNVPGNITLLPLPPRSPELNPVENVWQFLRDNHLSNRVFTGYDDIVAHCCAAWNDLIEQPWRIRSIGRREWAHGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ0</accession>
    <name>A0A2M9PCJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000541">
        <property type="protein sequence ID" value="PJN95232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041698">
        <property type="entry name" value="Methyltransf_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13649">
        <property type="entry name" value="Methyltransf_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Methyltransf_25" evidence="1">
        <location>
            <begin position="47"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22854" checksum="DBB2F8344A36C1C0" modified="2018-04-25" version="1">MTMSEDPNRWEDVYRSKEEAETSWFEDRPQVSLDLIAETGAGKDAAIVDVGAGSSRLVDCLLEHGFRRITVLDISETALAKARSRLPQDASIEWVVADVLHWQPSGRFDVWHDRAAFHFLTEASHQDTYLKVMDQTLVSGGHAIIGTFALDGPTSCSGLPVARYDAALLSDRLGSGYRLVRSLSHAHRTPWGSVQRFHFALFQKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ4</accession>
    <name>A0A2M9PCJ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TetR/AcrR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09490</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000523">
        <property type="protein sequence ID" value="PJN95266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039536">
        <property type="entry name" value="TetR_C_Proteobacteria"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14246">
        <property type="entry name" value="TetR_C_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="27"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="24495" checksum="24ED63A531FACDF3" modified="2018-04-25" version="1">MENPGLEHRLTESEGAPPEAAAPSRTERKLAQVLAGAREVILAHGFQAASVDDIARAAGVSKATLYRYFPDKASLFAAVMSADCIWRCEERLPVETEGRPLAEILSDVALWHARKALSPEGQSAFRAALAESERFPELGEAFFDKMDGGRRSLVPILARAAERGEIETDDPDQAARHFFALCRGDLFLRRLFCGAHASCEDRMKTHVREAVRAFLCIYRPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ8</accession>
    <name>A0A2M9PCJ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000530">
        <property type="protein sequence ID" value="PJN95253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16450" checksum="88E08A18415C68C7" modified="2018-04-25" version="1" fragment="single">MPRRRPAEAMTQSATIPFSTIVHALREAGMQISVREVLEGIAALETIPDPFGYLSTVTARTDSEQAPNRQRLAKRDQLVWLVQTLWARSEAEREIVRRTIEHKIAPAPALYAIDLRRTARAGVVSREGETIRPPSPDPLEDLTAATGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW4</accession>
    <name>A0A2M9PCW4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000488">
        <property type="protein sequence ID" value="PJN95352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="56"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10093" checksum="3C52CD6B9230777D" modified="2018-04-25" version="1">MAVEAKGLSDLDLRWSFELAFRVSIQLADGTTLDPEQARFEALAAVFGLSPAITGGSSAPGARSSGSPASIRGGRGIRFRRNGFQTGKPLSSRPSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD8</accession>
    <name>A0A2M9PDD8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type II secretion system protein GspE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000400">
        <property type="protein sequence ID" value="PJN95556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037257">
        <property type="entry name" value="T2SS_E_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160246">
        <property type="entry name" value="SSF160246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00662">
        <property type="entry name" value="T2SP_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="316"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="514" mass="55463" checksum="B03D6C3A60C6A504" modified="2018-04-25" version="1" fragment="single">MTFPTPPVLSRALPTLPYGFARRHGVILRQVQDRAVCLCRTGAQATAMVEAQRIAGGDLSFEMLEDAAFDVALAQTYRDSASDASEAASADGDLAALADSAALVDDLLDQSDDAPVVRLINALLLEAIKENASDIHIETQERRLVVRFRVDGILREVLEPRRALAPLLVSRIKVMARLDIAEKRLPQDGRVSLRVGGHEVDVRISTIPSQYGERVVMRLLDRGRRALGLDRLGMSPRDRGAFERLLARPDGILLVTGPTGSGKTTSLYAALGSINDRSRNIMTIEDPIEYSVDGVGQTQVNPRTDLTFARGLRAILRQDPDVIMVGEIRDRETAQIAVEAAMTGHFVLSTLHTNTAVGAVSRLVDMGVERFLLAPMLAGVVAQRLVRRLCPDCAQPDVANEFDCDLLDGAIAIGAPVHRAQGCPACLNLGYRGRTGIYEVVTVDRAMEGMIHAGAAEAQLVAHARRLGPSLIQDGVRKICEGVTVDRAMEGMIHAGAAEAQLVAHARRLGPSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI0</accession>
    <name>A0A2M9PDI0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ornithine aminotransferase</fullName>
            <ecNumber evidence="3">2.6.1.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Ornithine--oxo-acid aminotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rocD</name>
        <name evidence="7" type="ORF">CNY89_07500</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-proline biosynthesis; L-glutamate 5-semialdehyde from L-ornithine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.13" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000379">
        <property type="protein sequence ID" value="PJN95605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00098">
        <property type="reaction ID" value="UER00358"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050155">
        <property type="term" value="F:ornithine(lysine) transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004587">
        <property type="term" value="F:ornithine-oxo-acid transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055129">
        <property type="term" value="P:L-proline biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010164">
        <property type="entry name" value="Orn_aminotrans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11986:SF18">
        <property type="entry name" value="PTHR11986:SF18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01885">
        <property type="entry name" value="Orn_aminotrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030587"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="329" mass="35102" checksum="F639547F2B7C4E10" modified="2018-04-25" version="1" fragment="single">MLTANLIEIETRLGANNYKPLDVVLSEGKGVWVTDVEGRRYLDCLSAYSAVNQGHCHPRILAAMVAQASRLPLTSRAFRNDQLGPFYEEIAALTGAHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGRAEIVVCAENFHGRTLGIISFSTDPDARGGFGPYLPGFKVIPFGDADALEAAITPNTVGFLVEPIQGEAGVVIPPAGYFRRVRELCTQHGVTLILDEIQTGLGRTGRMLAEEHEGIEADVTLVGKALGGGFYPISAVLSNSEVLGVLQPGQHGSTFGGNPLACAVARAALKVLVEEGLVEASETRGRQFLEGLRAIRSNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI5</accession>
    <name>A0A2M9PDI5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000388">
        <property type="protein sequence ID" value="PJN95583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="174" mass="19464" checksum="C04A4B1DEBB98594" modified="2018-04-25" version="1" fragment="single">MAFANRPEDFAAVLGDFSEAALDPAFWIPAIEGLLRLHGGTSGSLMTLDQQGGAPDPLAMLGFSDKAFELYAEHYHQVDLWADLGRQNPQLRGVLGQSLVPDEVFERSEVWNDFSRHHVGAFHLLGAVFELGGGRTAILGLHRQRDAEPFDEEDRRQIDRVLPHLRRALQLRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ3</accession>
    <name>A0A2M9PDQ3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Sulfate transport system permease protein CysT</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">cysT</name>
        <name evidence="12" type="ORF">CNY89_07290</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.</text>
    </comment>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell inner membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000365">
        <property type="protein sequence ID" value="PJN95638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015419">
        <property type="term" value="F:ABC-type sulfate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011865">
        <property type="entry name" value="CysT_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005667">
        <property type="entry name" value="Sulph_transpt2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406">
        <property type="entry name" value="PTHR30406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406:SF8">
        <property type="entry name" value="PTHR30406:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00969">
        <property type="entry name" value="3a0106s02"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02139">
        <property type="entry name" value="permease_CysT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0764">Sulfate transport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="65"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="134"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="187"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="247"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="62"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="30167" checksum="7C6E7C77CD7908D2" modified="2018-04-25" version="1">MPSFAFRNPSPMPGFGLAFGTMMTMLSLVVLLPIGALILYGADVGVAQLWSQIDTPRVWASLRLSFVTAFLAALFNLFFGLALAWVLVRYRFPGKRIVDAMVDLPFALPTAVAGIALTALYAPNGAFGSLLAPLGIKVAYTSLGIWVALVFIGIPFVVRTVQPVIEEIEREVEEASATLGAYRARTFLRVILPMLTPALLTGFALALARAVGEYGSVIFIAGNLPRVTEIAPLLIVIKLEEFDHNGAVAIALAMLSISFLMLLVINLIQVWSRRRFGDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE94</accession>
    <name>A0A2M9PE94_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000287">
        <property type="protein sequence ID" value="PJN95843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="10967" checksum="FB3FBB0C1FEAB614" modified="2018-04-25" version="1" fragment="single">ADGTVTGYTPRVSGEVHAIHYAKGDFADGVDFTITSEATGESLWTESNVNASASRYPRVPTHSPAGVAALYAAGGTGVLARPGLGGDRVKIAIAQGGAVKSGAFHILVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA2</accession>
    <name>A0A2M9PEA2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase</fullName>
            <ecNumber evidence="2">2.7.7.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">cpsB</name>
        <name evidence="2" type="ORF">CNY89_05850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.13" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000270">
        <property type="protein sequence ID" value="PJN95887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004475">
        <property type="term" value="F:mannose-1-phosphate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="1">
        <location>
            <begin position="6"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13274" checksum="DBE079DEF358B9D3" modified="2018-04-25" version="1" fragment="single">MPSITPVILCGGSGTRLWPLSRQSYPKQFGRLLGSESLFQASVKRLPEPEFARPIVVTGSEFRFIVTEQLAGIGKAAGSVLIEPDGRNSAPAVLAAALKLAETDPDGLMLVCPSDHAIADPEAFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ2</accession>
    <name>A0A2M9PEJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05490</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000249">
        <property type="protein sequence ID" value="PJN95943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="6"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="129"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="129"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="228" mass="25660" checksum="360EEC9D09996899" modified="2018-04-25" version="1">MSVLKKILMVDDDADLREALADQLVMTEEFDVFEAGDGEGGLARARDEHYDLVLLDVGLPDMDGRELCRLMRKQGVKCPIIMLTGHVTDSDTIQGLESGANDYIAKPFKLPVLLARIRAQLRQHEQSEDAVFAVGPYTFKPAAKILIDERDKKIRLTEKETNILKYLYRASDAVVPRDELLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSSAKILVTEPGGYRLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM1</accession>
    <name>A0A2M9PEM1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Chaperone protein ClpB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13 15" type="primary">clpB</name>
        <name evidence="15" type="ORF">CNY89_05230</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homohexamer. The oligomerization is ATP-dependent.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Homohexamer; The oligomerization is ATP-dependent.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12">Belongs to the ClpA/ClpB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000235">
        <property type="protein sequence ID" value="PJN95986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009408">
        <property type="term" value="P:response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017730">
        <property type="entry name" value="Chaperonin_ClpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036628">
        <property type="entry name" value="Clp_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004176">
        <property type="entry name" value="Clp_R_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018368">
        <property type="entry name" value="ClpA/B_CS1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02861">
        <property type="entry name" value="Clp_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81923">
        <property type="entry name" value="SSF81923"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03346">
        <property type="entry name" value="chaperone_ClpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51903">
        <property type="entry name" value="CLP_R"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00870">
        <property type="entry name" value="CLPAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 12" id="KW-0143">Chaperone</keyword>
    <keyword evidence="7 13" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 12" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 11" id="KW-0677">Repeat</keyword>
    <keyword evidence="13" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Clp R" evidence="14">
        <location>
            <begin position="3"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="13">
        <location>
            <begin position="412"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="813"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00026057"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU004432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU362034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN95986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="813" mass="88948" checksum="C2BEC9E206CEDCA6" modified="2018-04-25" version="1" fragment="single">MNFEKFSDRARGFVQAAQTIAMRENHQRFLPEHLLKALLDDEQGLAGNLIRAAGGDPGIAYANVEGALAKQPKVEGGQNQLYMDTQTGKVLAEAEKIAKQAGDSFVTVERLLTALAVTKSEAEAALKAAGVTAQGLNAAINDVRKGRTADSASAEQGYDALKKYARDLTAAAREGKIDPIIGRDDEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESIADKQLLALDMGALIAGAKYRGEFEERLKAVLTEVQAAAGEIILFIDEMHTLVGAGKAEGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVNEPTVEDTISILRGIKEKYEVHHGVRIMDSALVSAATLSHRYIADRFLPDKAIDLMDEASARLRMQIDSKPEELDALDREILQKQIEAEALKKETDAASQDRLAKLVKELADLEERSRQMTAAWQSERDKLKGAADIKEQLDQARIELETAKRQGNLQRAGELAYGLIPGLEAKLVEAEAKGADALVEEAVTPEQIAQVVERWTGIPVDRMLEGERDKLLRMEDSLGKRVIGQHEAVTAVSNAVRRARAGLNDPNRPLGSFLFLGPTGVGKTELTKALASFLFDDDQAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVLLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFKNTLIVLTSNLGSQALSLLPEGANAEEARDQVMVAVRAHFRPEFLNRLDEIVLFDRLSRANMDGIVDIQLGLLERRLAPRGITLEVDAAARTWLADRGYDPVYGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ3</accession>
    <name>A0A2M9PEQ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04900</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000215">
        <property type="protein sequence ID" value="PJN96040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="5"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="24362" checksum="365B833428F18A4E" modified="2018-04-25" version="1">MASTPQGQRDAYYLLLEAIDQGEFRPGDRLVESDLAERFGVSRTPIREALQRLETQSVLARDGRSLVVSSLNHDQLGELYTVRAELEGLAARLAAQHAAPEEVRVLWEMIRKDRELLDRPDMLARANKRFHRQIHLASHNRYLVQQLEMVHRSMALVSNTTLAVEGRGQRALEEHEAVVRAIEAHDGEAADSAIRTHISHAFETRLIWDAERYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU8</accession>
    <name>A0A2M9PEU8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Carbam_trans_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000202">
        <property type="protein sequence ID" value="PJN96087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003696">
        <property type="entry name" value="Carbtransf_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02543">
        <property type="entry name" value="Carbam_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carbam_trans_N" evidence="1">
        <location>
            <begin position="45"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="224"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24666" checksum="CA353918139F29D0" modified="2018-04-25" version="1" fragment="single">MARRTLGALVAKGADEAHPEATGSWADLFRVRRILRQTFGACPAEIAYYDHHLTHQLYAESVVDWPDCLSLSIDGGGEVDATVLSLVRDGRRQDLKRIRWPNSLGHFYSAFTGYLGFRMLEGEYKMMGLAPYGAPRLKGVILDRILRLEDQGGYRLDTTICDYHRALEGSFPAELTALVGPPRAPDETPTEGHLALAASVQAAFEAAQQNLLAWGKAQAPGIER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV1</accession>
    <name>A0A2M9PEV1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Acetolactate synthase</fullName>
            <ecNumber evidence="4 8">2.2.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_04805</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
        <text evidence="8">Binds 1 thiamine pyrophosphate per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="4 8"/>
    <dbReference type="EMBL" id="PHNO01000210">
        <property type="protein sequence ID" value="PJN96056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd02015">
        <property type="entry name" value="TPP_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012846">
        <property type="entry name" value="Acetolactate_synth_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039368">
        <property type="entry name" value="AHAS_TPP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012001">
        <property type="entry name" value="Thiamin_PyroP_enz_TPP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02776">
        <property type="entry name" value="TPP_enzyme_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00118">
        <property type="entry name" value="acolac_lg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_N" evidence="11">
        <location>
            <begin position="5"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_M" evidence="9">
        <location>
            <begin position="197"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="10">
        <location>
            <begin position="397"/>
            <end position="544"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="584" mass="63629" checksum="85C1E79466823392" modified="2018-04-25" version="1">MHRQMTGAQIVLQALKDQGVDTVFGYPGGAVLPIYDEIFQQNEIRHILVRHEQAATHAAEGYARSTGKPGVVLVTSGPGATNAVTGMVDALMDSIPMIVLSGQVPTFMIGNDAFQEADTVGITRPCTKHNWLVKDTARLAETIHQAFHVATNGRPGPVLVDIPKDVQFATAPYVGPEKAAKGHYTPRTRADDAAILAAVEALETAERPILYSGGGVVNSGPEATRLLRELVAETGFPITSTLMGLGCYPASGPNWLGMLGMHGTYEANWAMHDCDVMVCIGARFDDRITGRVDAFSPHSLKIHIDIDPSSINKNVHVDVPVIGDVGSVLADILAVWKARGSRTQSEDLAKWWAKIETWRAKKCLAYRNSETIIKPQYALQRLEALTKGRDRYITTEVGQHQMWAAQYLGFEEPNRWMTSGGLGTMGYGMPASVGVQIAHPDALVVNVAGEASWLMNMQEMSTAVQYRLPVKQFILNNERLGMVRQWQQLLHGERYSSSWSESLPDFVKLAEAFGAKGIRCDDPAGLDDAIREMLDHPGPVIFDCLVEKHENCFPMIPSGKAHNEMLLPEMGVADAIDAGGAVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW2</accession>
    <name>A0A2M9PEW2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Precorrin-6A synthase (Deacetylating)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000208">
        <property type="protein sequence ID" value="PJN96066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014776">
        <property type="entry name" value="4pyrrole_Mease_sub2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11053" checksum="A3740B2E1EBD18A2" modified="2018-04-25" version="1" fragment="single">LAACHAIPLNAVGGAVHVTTGRRLRESPPEAETVAVMLDGGCAFQGLEGAEYTIYWGAYLGMPQEIALSGPLDEMAGRIVEVRAEAREAHGWIMDTYLLRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX3</accession>
    <name>A0A2M9PEX3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Mannonate dehydratase</fullName>
            <ecNumber evidence="7">4.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">uxuA</name>
        <name evidence="9" type="ORF">CNY89_04645</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the dehydration of D-mannonate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O</text>
            <dbReference type="Rhea" id="RHEA:20097"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17767"/>
            <dbReference type="ChEBI" id="CHEBI:57990"/>
            <dbReference type="EC" id="4.2.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate metabolism; pentose and glucuronate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the mannonate dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.8" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000201">
        <property type="protein sequence ID" value="PJN96089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00246"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008927">
        <property type="term" value="F:mannonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006064">
        <property type="term" value="P:glucuronate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004628">
        <property type="entry name" value="Man_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30387">
        <property type="entry name" value="PTHR30387"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03786">
        <property type="entry name" value="UxuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00695">
        <property type="entry name" value="uxuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="214"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00002713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00007389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="270" mass="28931" checksum="CAA604A1C812D375" modified="2018-04-25" version="1" fragment="single">RIQGAQGLHPAPDRQGGGGPHHHQPRCAGRGRGDVWFQSATESDRADLLRSIMSGLPGAYDRYDIAGLKTAIEGYEGLGQDELRANYARFLAEVIPAAEDLGMRFCVHPDDPPRDILGLARIVSDADDIAWILGAQDSPANGLTLCAGSLGANPANDVPAIAARFADRIHFVHLRNVAKEADGSFQEADHLGGDTDMVALVGVLLKEERRRLEDGRQDAEIPFRPDHGHEIGPDQGRGTHPGYPLVGRLRGLAELRGVIAALSHPSVSHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF45</accession>
    <name>A0A2M9PF45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GlxA family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000182">
        <property type="protein sequence ID" value="PJN96151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="219"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="34428" checksum="8C6B5F05EDCB17B7" modified="2018-04-25" version="1">MTEVHSGTAQRFGFLLVPNFALMSFAAATEPLRAANLLAGSELYRVASFSADGEPVTASSGLAVPCQPLEDADLHILFVCAGGGLDDWRDPRILPLLRRLARRGVRLGGISGGPFLLAAAGLLSGRDFTIHWEHAAALIEAFPDLAPRPARFVLDGDRITCGGGIAPLDMMHALIAERLGADFARRVSDWYLHAAVSEPGAPQRAAAAERHGTHHPGLLAAFAAMEATIESPLPRVAIARAAGVSARHLDRLFADQLGTTCGAAYRRLRLAHAGRLLRQSPLSLSQIAFATGFSSPSHFSRAFRQTFGVPPGAWRARGQRQVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF49</accession>
    <name>A0A2M9PF49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000180">
        <property type="protein sequence ID" value="PJN96156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="19650" checksum="F6768C75B67951C3" modified="2018-04-25" version="1" fragment="single">MSGPWNDFNSAQSNTNVIPKGTLAKVRLTLRPGGFDDPSQGWTGGWARRAATGAVYLDAEYTVVEGPYARRKVWSLIGLYSPKGPDWANMGRGLIRGILNSARGVSDKDNSPEAQARRRINGFGDLDGVEFIGRIDIGTDTNGEDKNEIRAAVTPDHRDYAALMGTVAPQVSAAPAQGHAPQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL6</accession>
    <name>A0A2M9PFL6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03075</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000123">
        <property type="protein sequence ID" value="PJN96347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="145"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="HisKA" evidence="4">
        <location>
            <begin position="228"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="364"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="202"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="374"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00388"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="402" mass="43583" checksum="6BB667425555B80F" modified="2018-04-25" version="1" fragment="single">MAVAEVLIFVPSVARFRVDNLQSRLELAQLAALAQLATPDQQEVAPALERQLLKTADIFNVVLRRQDVRELALSGEMPQMPSATYNLLETTDVELMRDAVAVFLTPGDRVIRVIGRAELGDQGEIEITMSEGPLRKAMIAYGLRILYVSLAISLATAALLFIAVRHYVVKPISRVVRHMTAYRDAPEDSSGIIEPSNSIRELRAAETALHDLQLQLTKALRQKDRLAALGGAVAKISHDLRNLLTTAQLLVDRIEASADPAVRRTAPKLVASLDRAISLCERTLTYGKAEEPAPVLADVALAPLLREVAENESLATEGRVPVTISAGTGIAVRADADQLFRVLTNLVRNAVQAIETSEKPGSVCIRAARPSPRPTGRRTSSCETPAQARPSPRLSPSSQTLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ9</accession>
    <name>A0A2M9PFQ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000109">
        <property type="protein sequence ID" value="PJN96397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009933">
        <property type="entry name" value="VirD1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07328">
        <property type="entry name" value="VirD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16661" checksum="58CCBA834909A032" modified="2018-04-25" version="1">MIGGRWQDPEAAKREPRADKTLSVRLTEAELAEFDAQIAGLGLNRNRALRIAARRIGGFLEVDAAVVEALRDINRQLAGVATNVNQIAHAANRTHDPDYRVFLAQRAELGRLLIETRGALQHILDLGARREDGLARLTVAVGEKPKRAGKAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS0</accession>
    <name>A0A2M9PFS0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L23</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplW</name>
        <name evidence="6" type="ORF">CNY89_03310</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL23 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01369_B">
        <property type="entry name" value="Ribosomal_L23_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012677">
        <property type="entry name" value="Nucleotide-bd_a/b_plait_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012678">
        <property type="entry name" value="Ribosomal_L23/L15e_core_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013025">
        <property type="entry name" value="Ribosomal_L25/23"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11620">
        <property type="entry name" value="PTHR11620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00276">
        <property type="entry name" value="Ribosomal_L23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54189">
        <property type="entry name" value="SSF54189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10801" checksum="5F1607FB6C0760C7" modified="2018-04-25" version="1">MSLNPELYDVIRRPIITEKATLASESGAVVFEVDIDATKPQIKLAVEKLFNVKVKAVNTTVTKGKVKKFRGRPGRRKDVKKAYVTLVEGNTIDVSTGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV1</accession>
    <name>A0A2M9PFV1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase</fullName>
            <ecNumber evidence="7">4.2.1.59</ecNumber>
            <ecNumber evidence="6">5.3.3.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="14">Beta-hydroxydecanoyl thioester dehydrase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">Trans-2-decenoyl-[acyl-carrier-protein] isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_02625</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a (3R)-hydroxyacyl-[ACP] = a (2E)-enoyl-[ACP] + H2O</text>
            <dbReference type="Rhea" id="RHEA:13097"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="EC" id="4.2.1.59"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the thioester dehydratase family. FabA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.59" evidence="7"/>
    <dbReference type="EC" id="5.3.3.14" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000102">
        <property type="protein sequence ID" value="PJN96423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008659">
        <property type="term" value="F:(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008693">
        <property type="term" value="F:3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047451">
        <property type="term" value="F:3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004317">
        <property type="term" value="F:3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034017">
        <property type="term" value="F:trans-2-decenoyl-acyl-carrier-protein isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010083">
        <property type="entry name" value="FabA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013114">
        <property type="entry name" value="FabA_FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272">
        <property type="entry name" value="PTHR30272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272:SF8">
        <property type="entry name" value="PTHR30272:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07977">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01749">
        <property type="entry name" value="fabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="11" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001055"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00017810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00031656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00032302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18418" checksum="98ABD44F551AEA57" modified="2018-04-25" version="1">MADRPTSIDKDGLLACARGEMFGQGNPQLPMPPMLMMDRVTEISDDGGPHGKGHVVAEFDIDPTLWFFACHFIGDPVMPGCLGLDALWQLTGFNLGWRGMQGRGRALGVGEVKFTGMVTPKVKLVEYRVNFSRVIDRKLKLGVADGEMRADGELIYTAADMKVGLFQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG96</accession>
    <name>A0A2M9PG96_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01715</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000062">
        <property type="protein sequence ID" value="PJN96577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014987237" description="Cytochrome c domain-containing protein" evidence="5">
        <location>
            <begin position="27"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="50"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="14385" checksum="DF64FCECE6C96042" modified="2018-04-25" version="1">MTPARRLRASLGFLCLAAGVQGSALAQDQATPPPSPAQEVAASADPALAAEVEAGRGLYLKNCRTCHGSKGTAGVPLAGNPKVSGDPGYLIWAILTGPGYMPEFGPVLTDADVAGISTFIMNSWGNDYGPVTAEDVSGLRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB4</accession>
    <name>A0A2M9PGB4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_01710</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000062">
        <property type="protein sequence ID" value="PJN96579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="5">
        <location>
            <begin position="19"/>
            <end position="470"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="477" mass="51417" checksum="BB5E05816A6C4CC1" modified="2018-04-25" version="1">MALHQNFINGRFEQAGPGDSIPVLNPARDTVISEIPDSSPEAVDQAVGAARRAQPAWEKLPAIERAGFLRQISARIRENVDEIARVISEEQGKILGLATVEAHFTANYIDYMAEWARRIEGEIVQSDRPGEQIFLFRQPLGVVAGILPWNFPFFLIARKMAPALITGNAIVIKPSEETPNNAALFAKLVTQTDLPEGVFNIVYGRGGTTGRALTLHEDVKMVSFTGSVETGSKIMADAAKNITKVNLELGGKAPAIVLKDADLDLAARAIKQSRVLNTGQVCNAAERVYVDSSVAEEFVAKLTAEMKATRYGDPLSDQDLDMGPIINKAGVAKIDGLVAGAKAEGAEVALGGNVANLGTGNHYEPTVLVNCRQDMEIVRREIFGPVLPVVQVSGLDEAIEYANDTVYGLTSSIYTRDLSSALRACGELHFGETYVNRENFEAMQGFHAGHGRSGIGGADGKHGMLEYTQTHLAYIQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE8</accession>
    <name>A0A2M9PGE8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Microcin ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01465</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000052">
        <property type="protein sequence ID" value="PJN96619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="6"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="264" mass="28429" checksum="3CD01D17716CDCB2" modified="2018-04-25" version="1" fragment="single">MGERLLEVRDLAIAFRQGGVSTLAVQRVSFDLHAGETLAIVGESGSGKSVTALSTVKLLADSAEVSGSVRYKGTELLAADERTLRRVRGNDISFIFQEPMTSLNPLHTIQKQVGETLALHQGLTGKAAAERIVELLTQVGVRDPESRLQAYPHQLSGGQRQRVMIAMALANNPAVLVADEPTTALDVTIQAQILTLLADLQKARGMGMLFITHNLGILRRIADRVAVMQGGEIVETGPTAAIFDAPRHPYTRKLLAAEPEGRPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP6</accession>
    <name>A0A2M9PGP6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">CbbBc protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00920</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mo-bis(molybdopterin guanine dinucleotide)</name>
            <dbReference type="ChEBI" id="CHEBI:60539"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000031">
        <property type="protein sequence ID" value="PJN96713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008863">
        <property type="term" value="F:formate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02787">
        <property type="entry name" value="MopB_CT_ydeP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02767">
        <property type="entry name" value="MopB_ydeP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037951">
        <property type="entry name" value="MopB_CT_YdeP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010046">
        <property type="entry name" value="Mopterin_OxRdtse_a_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041953">
        <property type="entry name" value="YdeP_MopB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43105:SF4">
        <property type="entry name" value="PTHR43105:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01701">
        <property type="entry name" value="Fdhalpha-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molybdopterin" evidence="5">
        <location>
            <begin position="98"/>
            <end position="405"/>
        </location>
    </feature>
    <feature type="domain" description="Molydop_binding" evidence="6">
        <location>
            <begin position="633"/>
            <end position="734"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="746" mass="80775" checksum="88D8B67EA7116034" modified="2018-04-25" version="1" fragment="single">GAKAVTWEATPKRADRAFFAGHTVTELWGWTDQPDGFDCPGCAWPDPKHTSSFEFCENGAKAVTWEATPKRADRAFFAGHTVTELWGWTDHALENVGRLTEPLVYDKATDRFAPLGWDEAFAGIAARLNAVGDGTRMEFYTSGRASNEAAFLYQLLARSLGSNNFPDCSNMCHEPTSVGLPQSIGIGKGTVTLEDFDHADAIFCFGHNPGTNHPRMLTTLREASRRGAPIVVVNPMRERGLERFAEPQNPVEMATLSSTPLASDYYLVRSGGDVAVLKGMIKALLAADAADLAMQGPGLLDRPFIAEHTEGFDALVADIEGTTWEAILARSGLERSEIEAMAQTYWRAERAIFCYGMGITQHRHGTENVRQLANLLLLRGNMGKPGAGICPLRGHSNVQGDRTVGITEKPAEAMLERLDATFGIRSPREHGHDAVAALAAIAKGSSRAFIGLGGNFVVAMPDPEMGFEAFRGLDLNVQILTKLNRTALLTAEHTYILPCLGRTERDERGGKAQSVTVEDSMSMVHASAGRLKPASEHLLSEVAIVAGIARATLPDSPVDWEAMAADYDLIRDGIEAVYPDFADFNARVRVPGGFRLPNGASERKWATPSGKANFLAMPGVLDEDDGLDEHTLVCSTLRSHDQYNTTIYGFDDRYRGVKGRRDVVFANADDMARRGLKSGDLVDLVFGARRLAGQTIVAHPISRGSVAIYYPESNVLIPADAFDPDSGVPAYKSIPVRLEPSGASAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ0</accession>
    <name>A0A2M9PGQ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alpha-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00945</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000032">
        <property type="protein sequence ID" value="PJN96710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022567">
        <property type="entry name" value="DUF3459"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11941">
        <property type="entry name" value="DUF3459"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="3">
        <location>
            <begin position="28"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="552" mass="63231" checksum="3BA6197737024311" modified="2018-04-25" version="1">MVLTDIEPREETAPQPDRDWWRGCVIYQIYPRSFQDSNADGVGDLAGIIQRLPYVAQLGVDAIWISPFFRSPMADFGYDVQNYRDVDPMFGTIGDFDALVRRAHELGIRVIIDLVLSHTSDQHRWFKESRSSRDNPKADFYVWADARPDGTAPNNWLSIFGGPAWEWDSERLQYYLHNFLTAQPDLNFHNPEVQQELLDVARFWLDRGVDGFRFDTINFFFHDKQLRDNPVLPEAERDYSTAPSVNPYNWQDHLYDKSQPENLEFLRRMRALMDEYPAIAAVGEVGDAQRSLEIVGAYTSGGDKMHMCYAFEFLSGTEPPTGLRFAEVLRRFDAAAPEGWACWAFSNHDVERHVSRWRMSPEQARVQAAVLMSLRGSICLYQGEELGLTEAYVPYEDLRDPYGIRFWPKFRGRDGCRTPMPWASDSAHAGFSDVKPWLPIAVDHLTHAVALQDPDEGSILAFYRRMLAFRRTQPALAKGGFRLIDASDRHLAFERDHYGLTLLCAFNLSDAPMHLTLPEGDWEGVEGAPWPAEIDGRDATLAPFTALYAERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT8</accession>
    <name>A0A2M9PGT8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">NAD(P)H dehydrogenase (quinone)</fullName>
            <ecNumber evidence="4">1.6.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">NAD(P)H:quinone oxidoreductase</fullName>
            <shortName evidence="4">NQO</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_00685</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a quinone + H(+) + NADH = a quinol + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:46160"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>a quinone + H(+) + NADPH = a quinol + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:46164"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.6.5.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="4">Binds 1 FMN per monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the WrbA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.2" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000021">
        <property type="protein sequence ID" value="PJN96750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008753">
        <property type="term" value="F:NADPH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01017">
        <property type="entry name" value="NQOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010089">
        <property type="entry name" value="Flavoprotein_WrbA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005025">
        <property type="entry name" value="FMN_Rdtase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037513">
        <property type="entry name" value="NQO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03358">
        <property type="entry name" value="FMN_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01755">
        <property type="entry name" value="flav_wrbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 4" id="KW-0288">FMN</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0521">NADP</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="5">
        <location>
            <begin position="4"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="10"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="78"/>
            <end position="80"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="98"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="20988" checksum="D1B946104A5FE119" modified="2018-04-25" version="1">MAKVLVLYYSSWGHMEAMANSAAEGARSAGAEVTVKRVPELVPDEVAKAAHYKLDQAAPIAAPAELVDYDAVIFGVPTRFGNMPAQMKQFLDQTGGLWASGALVGKVGSVMTSTATQHGGQETTIITTQIVLQHHGMTIVPLSYAYAGQSGVDKMRGGSPYGATAITDSDGSRWPSEQELEGAAFQGRRVAEIAGKLFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH20</accession>
    <name>A0A2M9PH20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">FMN reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000009">
        <property type="protein sequence ID" value="PJN96821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="1">
        <location>
            <begin position="24"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="486" mass="54258" checksum="41473A2FF07D82CF" modified="2018-04-25" version="1">MPQSWPRPRAGASGRQGEDNARLIFEPLAFRNLTIKNRLFRSNISGTFDDYNGQGGHARINWEKKFSRGGVGAIISSFVPVTVRGRILTRYAMIDADDKIPFWRRLGEAVHEDDCRYILQLSHSGRQQDLGGVENLYRRAPSSTDRQDYFHGILAQAMTEPEIAVLVDQFAQGARRAQAAGLDGVELHGANGYLITQFLSSGINDRKDGYGGGWEARTRFVLEIVRAIRREVGPGFHLQMKINGVDHNDWLYPWQKKGNTLDETVNICRLLWDDGKGVDAFHISSGSTFPHPRNPPGDLPMRELVRWYDGMLSQGVRARFNYRIFTMPLASRLFRAYWVWRRGKVIEGINAEYARAVTEAMRKIDDTVKVLCTGGWQHGSAIAGAIRSGACDGVSIARPLIANPDLPQMLRTSEGPPPGRECTYCNKCLINDLENPLGCYELARYPGATFEARYEAMIAEVMSVFDPPAFTDPPAVAASPEADHVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH47</accession>
    <name>A0A2M9PH47_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="579"/>
            <end position="676"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="607"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="660"/>
            <end position="676"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="676" mass="75947" checksum="E75F788959A02AA0" modified="2018-04-25" version="1">MAEPLDHSRLKRMVDYAIDEMASAREGSQQARRYYDSEQLTAAELAVLKKRKQPPLIINRIKRKIDAMVGLEQKGRVDPRALPRNPQDEDGADIATKALVYVDDVTRFDQKRSQFCYNLAIEGYGGVEVNVRKTAEGYDPDILRLRFEEIFFDPHSRELDFSDATFKGIEKWMSLAKAKDFCRRFNQEMDEATLDDMLKSAMNNATSDVSEDRPKATSTRAWGDPKTQRVKLAYMYYEADGVWRLALFTGGGVIYDEPSPFLDYSDDPNGVPACGIELQACYIDQENQRYGIVTDMIPMQDEINKRRSKLLHMLNSRQTMGAQGAVEDVTKMKRELAQPDGHIEYLQDPLATRPSFEIVPNGDQTQGQFELLQESKSEIDMLGPNASLLGQLEGSQSGRAIIAQQQAGMAELAPFYDAMNDWTLRVYRQMWNRIRQFWEGPRWIRVTDEEGSAQFVAINQPVPGMVNPDGTPAVENPVSQLDVDIIIDVSPEYASLQYEQFQTLTELAKSGMIQLPPDVIIEASSLRNKAKLLEKLKGGDDPQAAQMQQMQQQMQMQMAELEMRLKAAEAGLKEAQTAKAQAEAEATMAGIGQTDAPQQPEPPDQKPMLDFEAKRAALAEQAREHDDKMRLEWSKHQASTTLAREGAAADGQVKAAQAAKLRRPEPKRPAAGAKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH63</accession>
    <name>A0A2M9PH63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8683" checksum="26286D347BBA03F1" modified="2018-04-25" version="1">MTATFAFEVGQTYWTRSAVSYDTIISIEVAGRTAQTLVTKCGKTLRIAVCPYTGSEKVKPRGTYSMCPVIFANQPTPVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P463</accession>
    <name>A0A2M9P463_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004859">
        <property type="protein sequence ID" value="PJN92336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="6978" checksum="7581E8FBF9CBC3D2" modified="2018-04-25" version="1" fragment="single">RLAPLLDARGLDLWMAGEVDAASLPSPPGNLVPLGRLAPLLDARGLDLWMAGEVDAASLPSPPGNLVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P493</accession>
    <name>A0A2M9P493_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004800">
        <property type="protein sequence ID" value="PJN92350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7643" checksum="CBA54CE9F1401162" modified="2018-04-25" version="1" fragment="single">CGDHRVKAGQIRRRFGENVGTLTREIFGLEVEKSGFHTLLYEAVSKGGSYNEILRAFNGQLGFEAKGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A1</accession>
    <name>A0A2M9P4A1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_30465</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004802">
        <property type="protein sequence ID" value="PJN92349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007343">
        <property type="entry name" value="Uncharacterised_pept_Zn_put"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30168">
        <property type="entry name" value="PTHR30168"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04228">
        <property type="entry name" value="Zn_peptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN92349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7674" checksum="B1D60E74A53B62C9" modified="2018-04-25" version="1" fragment="single">QQASRGVVVPDSFTHGTSEQRQIWFDKGYRTGDDALQQASRGVVVPDSFTHGTSEQRQIWFDKGYRTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D4</accession>
    <name>A0A2M9P4D4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004706">
        <property type="protein sequence ID" value="PJN92385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5775" checksum="49D8FF5AEFE663DA" modified="2018-04-25" version="1" fragment="single">MGQVHHGCATTTAAVRRAIQHSQESLRALAKRYGINQKTVAKWKKRTSVADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D7</accession>
    <name>A0A2M9P4D7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004647">
        <property type="protein sequence ID" value="PJN92404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6764" checksum="F29A0D8D9D84EA75" modified="2018-04-25" version="1">MKVNIRFEDMPPFEIIEIVVMKTSDLSRVGFVELEREGSEQVVSVIMAFEDATCLARTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W0</accession>
    <name>A0A2M9P4W0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004134">
        <property type="protein sequence ID" value="PJN92560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9017" checksum="2E0F8AAE24F90858" modified="2018-04-25" version="1" fragment="single">PEIAARTGLSPSTRVISGIHDSSANFYRYQAAGLTDFTVISTGTWIALGTLRPEIAARTGLSPSTRVISGIHDSSANFYRYQAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W2</accession>
    <name>A0A2M9P4W2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004174">
        <property type="protein sequence ID" value="PJN92548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9057" checksum="72B51E892577FD66" modified="2018-04-25" version="1" fragment="single">GYYATQVATMKLAGRGDMIARLIDNRITFLRAGNQPGGREPGAENLANLAPGYYATQVATMKLAGRGDMIARLIDNRITFLRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W7</accession>
    <name>A0A2M9P4W7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004062">
        <property type="protein sequence ID" value="PJN92586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="8738" checksum="3E6821795D0C1405" modified="2018-04-25" version="1" fragment="single">LCPLAGTTGVKLIDGGLRDGGERAGIGRRVAEGQAVVPPDSPLAWSVMDMSQALLCPLAGTTGVKLIDGGLRDGGERAGIGRRVAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X7</accession>
    <name>A0A2M9P4X7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004021">
        <property type="protein sequence ID" value="PJN92596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="59"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9030" checksum="2B3B18B5610F3EE4" modified="2018-04-25" version="1" fragment="single">RLSAPPELFGLYLHPTTARLDHIAVYLAHGVTQAEAPGQGAEIRGADFYPPDALPASPRRPSSSASTCTRPRRGSTTSRSISLMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P507</accession>
    <name>A0A2M9P507_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_27940</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003899">
        <property type="protein sequence ID" value="PJN92641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6629" checksum="FAA7B446E64C3A57" modified="2018-04-25" version="1" fragment="single">KLREVYVAETAEAAWDALEAFDADWGGQYPSIAQAWRRAWQEVIPFFAFSPEIRRVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P521</accession>
    <name>A0A2M9P521_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">A/G-specific adenine glycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_28220</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003995">
        <property type="protein sequence ID" value="PJN92608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016798">
        <property type="term" value="F:hydrolase activity, acting on glycosyl bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006284">
        <property type="term" value="P:base-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044298">
        <property type="entry name" value="MIG/MutY"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42944">
        <property type="entry name" value="PTHR42944"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="5" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="6263" checksum="F2E5061048588071" modified="2018-04-25" version="1" fragment="single">MARRLPWRVPPGSDERPDPYRVWLSEVMLQQTTVAAVKGYFEAFTARWPRVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P557</accession>
    <name>A0A2M9P557_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Diacylglyceryl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003865">
        <property type="protein sequence ID" value="PJN92648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019660">
        <property type="entry name" value="Put_sensory_transdc_reg_YbjN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10722">
        <property type="entry name" value="YbjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10297" checksum="1AD2326853CA9FD3" modified="2018-04-25" version="1" fragment="single">IDIVESLAEERSWDFDRIADDQIAMAIEGAWSTYSVTLAFSAREETLRLICAFEMAPPARRASAFHKLMALANDKCWSGAFVMWPDQKLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P579</accession>
    <name>A0A2M9P579_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-isopropylmalate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003729">
        <property type="protein sequence ID" value="PJN92697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Iso_dh" evidence="1">
        <location>
            <begin position="7"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="5890" checksum="4353526DBFB17772" modified="2018-04-25" version="1" fragment="single">MTKRSLLILPGDGIGPEVMGQVRRVIDWFGANGLAFEVEEDLVGGCAYDAHGAAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D8</accession>
    <name>A0A2M9P5D8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Metallo-mystery pair system four-Cys motif protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003656">
        <property type="protein sequence ID" value="PJN92728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6126" checksum="7E06D54D5D0EBBB2" modified="2018-04-25" version="1" fragment="single">MADVGLAFEIGVPFDLNHGDPTLAPAPLDLTAMFWTWRGGYKFLKFEVAPEGAAAMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L4</accession>
    <name>A0A2M9P5L4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003372">
        <property type="protein sequence ID" value="PJN92819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4691" checksum="5133A66DF0283010" modified="2018-04-25" version="1" fragment="single">GPDRPMVAAYRERLCARPSFARAIDEARPWRRYFPLGARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L8</accession>
    <name>A0A2M9P5L8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003409">
        <property type="protein sequence ID" value="PJN92808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8846" checksum="69DA710535BF7174" modified="2018-04-25" version="1" fragment="single">MREMTALIAHRGRPGAIVSDNGTEFTSSAVLAFTQAAGLDWRYIAPGKPTQNAFAESFQGKMRDECLNEHLFFSMNHARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N3</accession>
    <name>A0A2M9P5N3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26045</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003307">
        <property type="protein sequence ID" value="PJN92839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12080" checksum="027FB4827C182A33" modified="2018-04-25" version="1" fragment="single">EWRSRALDAVYPVVIFDALRVKIRDKDSRIVKKQGRLPGPGGSRATGEREVLGLWIAENEGAKFWLSVMTELRNRGVQDILIAVVDGLKGFPEAITAAFPQTMVQTCVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P4</accession>
    <name>A0A2M9P5P4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12120</name>
        <name evidence="3" type="ORF">CNY89_25800</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003226">
        <property type="protein sequence ID" value="PJN92866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000743">
        <property type="protein sequence ID" value="PJN94832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="2">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5523" checksum="A898D83973D6B082" modified="2018-04-25" version="1" fragment="single">MLVGYMRVSSSDDRQSVALQCDALRAAGVDPRHLHEDKASGARDDRPGLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5X5</accession>
    <name>A0A2M9P5X5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002990">
        <property type="protein sequence ID" value="PJN92961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8190" checksum="A1FD5476AA01DC72" modified="2018-04-25" version="1" fragment="single">WYSYVLESLLNPFGNPRDICVERQLLALQFFGIAVSHQAFIDGRIKQVFNISSLGFVVLYASETKTTFMIAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P698</accession>
    <name>A0A2M9P698_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">4HBT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002684">
        <property type="protein sequence ID" value="PJN93076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="4"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6334" checksum="FD4ABDE71945540E" modified="2018-04-25" version="1" fragment="single">TPAHPVLSTLSASFLSPGRGEALRIRSEILHAGRSLAATRTQIRSTDGRLALDAVCRHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B4</accession>
    <name>A0A2M9P6B4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002622">
        <property type="protein sequence ID" value="PJN93101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005130">
        <property type="entry name" value="Ser_deHydtase-like_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03313">
        <property type="entry name" value="SDH_alpha"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SDH_alpha" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_alpha" evidence="1">
        <location>
            <begin position="43"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14302" checksum="C0151CEA645A46E5" modified="2018-04-25" version="1" fragment="single">MAVNEENAAGGQVVTAPTNGAAGVVPAVIRYYRDHCIGATHTGDRLWQVMDACIERGLATDGTLPGGLKVRRRAKAIHQALLAERGNNLAQPHVANEWLSVYAMAVNEENAAGGQVVTAPTNGAAGVVPAVIRYYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J2</accession>
    <name>A0A2M9P6J2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Erythrose-4-phosphate dehydrogenase</fullName>
            <ecNumber evidence="4">1.2.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">gapA</name>
        <name evidence="4" type="ORF">CNY89_23230</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.12" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01002484">
        <property type="protein sequence ID" value="PJN93147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004365">
        <property type="term" value="F:glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020831">
        <property type="entry name" value="GlycerAld/Erythrose_P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020830">
        <property type="entry name" value="GlycerAld_3-P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020828">
        <property type="entry name" value="GlycerAld_3-P_DH_NAD(P)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43148">
        <property type="entry name" value="PTHR43148"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00044">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00078">
        <property type="entry name" value="G3PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00846">
        <property type="entry name" value="Gp_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00071">
        <property type="entry name" value="GAPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gp_dh_N" evidence="3">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15036" checksum="2E08137264BB7FBD" modified="2018-04-25" version="1" fragment="single">LGPVETNAHLVRYDSVHGRFPGKVTVSGDTIDVGRGPIKVTAVRNPAELPWGDVDIAMECTGIFTDKEKAKVHLENGSKRVLVSAPSGGADKTIVFGVNDKSLTKDDLVVSNASCTTNCLSPVAYVLDKAVGIEKGFMTTIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P784</accession>
    <name>A0A2M9P784_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001947">
        <property type="protein sequence ID" value="PJN93411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14998" checksum="BA992608F24EE61E" modified="2018-04-25" version="1" fragment="single">GNIVEGFSRFHWGGVFKNGVLVDVNIPAPDKQVISAGDADTFEFVGGHIDPARPVIIAGLDLDKGEELTLTGFDKGTFVGSAATNEGTGFSLDSVKELKEIVYWSHDVIGRASLDHHDLLLYIDQGQEGVATFVLTDYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I0</accession>
    <name>A0A2M9P7I0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20245</name>
        <name evidence="2" type="ORF">CNY89_20265</name>
        <name evidence="1" type="ORF">CNY89_26705</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003508">
        <property type="protein sequence ID" value="PJN92778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001792">
        <property type="protein sequence ID" value="PJN93514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001789">
        <property type="protein sequence ID" value="PJN93517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6410" checksum="325D5AF423225119" modified="2018-04-25" version="1">MAAERVAFRFQITIPTGVGGEPYVSPVFLSNPDTGFTLTLTPEELTEIAEQPTITLGSTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L6</accession>
    <name>A0A2M9P7L6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sulfotransfer_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001797">
        <property type="protein sequence ID" value="PJN93509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfotransfer_1" evidence="1">
        <location>
            <begin position="49"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="21899" checksum="DEF68B75A22AF979" modified="2018-04-25" version="1" fragment="single">EYYPTLWRDFDPARHKVALEASVSYTKLPRYGATSAAIEAYRQHTGAAFRMLYIMRNPIDRAESHIAHNISKGRCSHDDYSSVMRLAIDTSRYAMQLARYHKLAGRRPASCSNFDELRSDPQALLQRSARFLGLDDFTFEIRPPSNVRSAVNDSTSFRLPPVERAWVRAALAEDMGTLGRKYGFDVSGWGFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M1</accession>
    <name>A0A2M9P7M1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Aquaporin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_19950</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the MIP/aquaporin (TC 1.A.8) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001730">
        <property type="protein sequence ID" value="PJN93556.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015267">
        <property type="term" value="F:channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1080.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023271">
        <property type="entry name" value="Aquaporin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034294">
        <property type="entry name" value="Aquaporin_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000425">
        <property type="entry name" value="MIP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022357">
        <property type="entry name" value="MIP_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45724">
        <property type="entry name" value="PTHR45724"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00230">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00783">
        <property type="entry name" value="MINTRINSICP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81338">
        <property type="entry name" value="SSF81338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00221">
        <property type="entry name" value="MIP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93556.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="15643" checksum="D7D0EB78F1DB8268" modified="2018-04-25" version="1" fragment="single">MFKKLSAEFIGTFVLVFGGCGSAVLAAGFPDLGIGFVGVALAFGLTVLTMAFAVGSISGGHFNPAISLGLAIADRFEWSELIPYWIAQVLGGLAAASVLYLIASGQPGWVPGGFASNGYGANSPGGYNLLSALVIEITLTAIFLIVILGVTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P6</accession>
    <name>A0A2M9P7P6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">N6_N4_Mtase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20220</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001784">
        <property type="protein sequence ID" value="PJN93520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002295">
        <property type="entry name" value="N4/N6-MTase_EcoPI_Mod-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00506">
        <property type="entry name" value="D21N6MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="5"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="19772" checksum="431C14BF014A3E47" modified="2018-04-25" version="1">MCGKVRLVYIDPPFATQTVFHSRKLAHAYEDVFECYEYLEFMRERLIFLHKIMADDGSIYVHLDAKMVFHVKIIMDEIFGLKNFRNCITRKKSNPKNYTRKQIRKCLGLHFVLYKIRSIRVEPPSRTLDRRARARISVCRCCIGTALYEGSRFMPPAFATAKPESLGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q9</accession>
    <name>A0A2M9P7Q9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001713">
        <property type="protein sequence ID" value="PJN93563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7396" checksum="8904F0319C876260" modified="2018-04-25" version="1">MSLIFIIRNDWDDRYLCGLDLAWINDGRATSKFKTEGEAAEAYDRYLIDHPEDEGRITIELYP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X2</accession>
    <name>A0A2M9P7X2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Rhomboid domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_19660</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001667">
        <property type="protein sequence ID" value="PJN93600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022764">
        <property type="entry name" value="Peptidase_S54_rhomboid_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035952">
        <property type="entry name" value="Rhomboid-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01694">
        <property type="entry name" value="Rhomboid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144091">
        <property type="entry name" value="SSF144091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="92"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="119"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Rhomboid" evidence="7">
        <location>
            <begin position="82"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="20153" checksum="D0DF454B980ECE24" modified="2018-04-25" version="1">MTNTHLATPRCKPNSQPLGPREPFRPLPRSLLALAGVIVCIELFLELADRGILSDPSLRSRVYMVGAFWSGLLHGARPIFEGQGWTMFVTHAFLHGGFLHMAMNTAVLLGLGRFTADRYGAWTVLPVFLVSAVAGGLAFGLMSSDPVPMVGASGAVFGAERTMNPACEQTPVTSLTNAIRELSRGQTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y4</accession>
    <name>A0A2M9P7Y4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF302 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001616">
        <property type="protein sequence ID" value="PJN93638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005180">
        <property type="entry name" value="DUF302"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035923">
        <property type="entry name" value="TT1751-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03625">
        <property type="entry name" value="DUF302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103247">
        <property type="entry name" value="SSF103247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF302" evidence="1">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8012" checksum="FF833A1D3A3ED1CC" modified="2018-04-25" version="1" fragment="single">YRILGACNPKMAHQAIGIEPRVGAMLPCNVILREVEDGVEVSAIDPVASMQAIENAELTAVAGEVRDLLAKAVEAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P826</accession>
    <name>A0A2M9P826_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoadipate enol-lactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001548">
        <property type="protein sequence ID" value="PJN93697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="5880" checksum="D2D80F49B02C5809" modified="2018-04-25" version="1" fragment="single">VGDADGSTPPELVRAMAASIPGARFEIIADAGHIPGVERPAEVARLIGDFLEETGHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P841</accession>
    <name>A0A2M9P841_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_18515</name>
        <name evidence="3" type="ORF">CNY89_19075</name>
        <name evidence="2" type="ORF">CNY89_23455</name>
        <name evidence="1" type="ORF">CNY89_23805</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002637">
        <property type="protein sequence ID" value="PJN93093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002544">
        <property type="protein sequence ID" value="PJN93124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001556">
        <property type="protein sequence ID" value="PJN93688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001469">
        <property type="protein sequence ID" value="PJN93769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="6048" checksum="5B027521D54082B5" modified="2018-04-25" version="1" fragment="single">HLQSFVAAYNFGRRLKTLKGLTPYEFICKRWTIEPERFIVDPIHRMPGLNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P847</accession>
    <name>A0A2M9P847_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glyoxalase/bleomycin resistance/extradiol dioxygenase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001512">
        <property type="protein sequence ID" value="PJN93726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7647" checksum="B8C0A1148FAEAF00" modified="2018-04-25" version="1" fragment="single">MTDRILETALYAPDLDAAEVFYGGLLGLPKVSRAGNRHVFFRVGPGMLLIFNPGETAKPAAAGALPVPAHGATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H2</accession>
    <name>A0A2M9P8H2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001424">
        <property type="protein sequence ID" value="PJN93819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="2"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5755" checksum="46B77473BE9339B4" modified="2018-04-25" version="1">MVIEAWRQHYNARRPHSSLGYRPPAPEVVQWPAPPAGSAAPATPAVAPRPVMN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I1</accession>
    <name>A0A2M9P8I1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF465 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001412">
        <property type="protein sequence ID" value="PJN93838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="31" mass="3547" checksum="D768BD669E5F3835" modified="2018-04-25" version="1" fragment="single">PASSDLSIKQLKVKKLHLKEEIERLSSMPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J6</accession>
    <name>A0A2M9P8J6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001398">
        <property type="protein sequence ID" value="PJN93853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="72"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11935" checksum="3DADEDE86912CAA6" modified="2018-04-25" version="1">MLAAGWRQACVPEGWTDDQVLEFASDTRPREDGSRGGTVARMSQHCKCAAEKVSCAKSLGYVHVRLDANRPTRTAIGQSESSPSVPEGISNSLKPKDLLVGQQGFEPRTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L1</accession>
    <name>A0A2M9P8L1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001394">
        <property type="protein sequence ID" value="PJN93859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6896" checksum="CA9C8CF8D0A045FB" modified="2018-04-25" version="1">MRSSGEEVGDDLRLLRVGREPRQRQIVRMKLRKEFAESDVLSCLFLNFLARDPAGTERF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N5</accession>
    <name>A0A2M9P8N5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001377">
        <property type="protein sequence ID" value="PJN93884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="15033" checksum="CE1F817D62778BB2" modified="2018-04-25" version="1">MDRQTLRDWVHRNAEGLAGLSNQRGAPRPRRLDPGQVPELMAWLEAGPDPAVDGVVRWRRQDLQRRITDRFGVELHERTVGKYLAALGYRRLSVRPRCSINCRSERTEKRIWIRPARISRSGGIEGRPSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R0</accession>
    <name>A0A2M9P8R0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Amino_oxidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001338">
        <property type="protein sequence ID" value="PJN93923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25907" checksum="460F6F8278C3B694" modified="2018-04-25" version="1">MRADRRSGLGGAQPVDTGFIVFNYANYPHLARLFRDLDVPVARSDMSFGVSIDGGRVEYSFRSLQGLLAQPANAARPGFLRMLRDIHRFNTQAEARAVEGQTVGDLTRALGLGDWFRRCYLRPICGAIWSTPETQIDAYPARTLVEFFRNHGLLGLNGHHQWWTVQGGSVEYVRRLETRLLRDGVRIETGAPVQAVAREEDGVTLHFADRPSQRFDEVAASRTAACNCRCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S3</accession>
    <name>A0A2M9P8S3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001337">
        <property type="protein sequence ID" value="PJN93924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019791">
        <property type="entry name" value="Haem_peroxidase_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037120">
        <property type="entry name" value="Haem_peroxidase_sf_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03098">
        <property type="entry name" value="An_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="SSF48113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50292">
        <property type="entry name" value="PEROXIDASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31660" checksum="8657217B03AC641A" modified="2018-04-25" version="1" fragment="single">GVGHFNKLRDGLGLDRYHSFDDFGRQNGIDDRTLAALKDVYGNAINRLDSLVGGLLEKNAPGSMLGETFTILNVMQFEALRDGDRFFYLNRLSPALADRIESTSLAEILERTTEVDHIYRDAFLAHDRVGGTGGSDRLWGSAGRDLMIGFAGWDRLSGGTGDDDLYGDRGGDRLFGGRGNDVLSGGRDDDALYGGIGQDYLDGGTSDDVLYGGGWADVLLGGAGKDRLHGGTENDRLDGGAGADRLWGDEGRDVFVFGEGTGRDVVHGFSKIDRLDVSAFDFDTMAELREATTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U4</accession>
    <name>A0A2M9P8U4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001314">
        <property type="protein sequence ID" value="PJN93951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="3240" checksum="C094A0F4374D5ABC" modified="2018-04-25" version="1" fragment="single">MPPPRRLGRPRTTDLREVMNAILYIATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W1</accession>
    <name>A0A2M9P8W1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 7">Transcriptional regulator MraZ</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">mraZ</name>
        <name evidence="10" type="ORF">CNY89_17255</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="7">Forms oligomers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
            <location evidence="7">Nucleoid</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MraZ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001299">
        <property type="protein sequence ID" value="PJN93972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009295">
        <property type="term" value="C:nucleoid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd16321">
        <property type="entry name" value="MraZ_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd16320">
        <property type="entry name" value="MraZ_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1550.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01008">
        <property type="entry name" value="MraZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003444">
        <property type="entry name" value="MraZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035644">
        <property type="entry name" value="MraZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020603">
        <property type="entry name" value="MraZ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035642">
        <property type="entry name" value="MraZ_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038619">
        <property type="entry name" value="MraZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34701">
        <property type="entry name" value="PTHR34701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02381">
        <property type="entry name" value="MraZ"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 7" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="9">
        <location>
            <begin position="8"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="SpoVT-AbrB" evidence="9">
        <location>
            <begin position="92"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN93972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="19385" checksum="D91DDCB22E3775F5" modified="2018-04-25" version="1">MARRFRGESVNKVDAKGRVSIPAPFRRVLEEGDPDWTAGLHPHLVLIHGRNDMQCLEGYTIRGMEELDDMISAMPKFDEDREYLEIVLNTNSSYAQVDETGRIVLSAKLREVVGITEDALFAGLGEKFQIWHPDMFAAHKAEVMRRCREEAGRDPFSRLDQLRPTRGGEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y1</accession>
    <name>A0A2M9P8Y1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001285">
        <property type="protein sequence ID" value="PJN93991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9461" checksum="0FCE01B603B52387" modified="2018-04-25" version="1" fragment="single">MTRKTPKQTAAAFVAVDSRGNFAWGSVRPTPQECFAVIERWNPRVEGVAPSFSIMPIQISYDPSRRLVVQLALELTPMDDPDWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G9</accession>
    <name>A0A2M9P9G9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IclR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16010</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001142">
        <property type="protein sequence ID" value="PJN94186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014757">
        <property type="entry name" value="Tscrpt_reg_IclR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005471">
        <property type="entry name" value="Tscrpt_reg_IclR_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09339">
        <property type="entry name" value="HTH_IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01614">
        <property type="entry name" value="IclR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00346">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51077">
        <property type="entry name" value="HTH_ICLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51078">
        <property type="entry name" value="ICLR_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH iclR-type" evidence="4">
        <location>
            <begin position="24"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="IclR-ED" evidence="5">
        <location>
            <begin position="86"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="181" mass="19475" checksum="4B8FF15875A0D87F" modified="2018-04-25" version="1" fragment="single">MDASLKRSRGRPRAFNPSPETTTVQALDRAIVILKALARGDGMSLTEIAEASEQAPATVYRVLQTYAGHAMVEFDAASQLWTVGPEAFRIGSAFLMRTNLVEQARGVMRELTAATGETSNLAIADGAEVVFLSQVETHEPIRAFFRPGTRGPIHASGIGKALLAHAPPEQIERLLREAGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M6</accession>
    <name>A0A2M9P9M6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001097">
        <property type="protein sequence ID" value="PJN94244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11305" checksum="5ABC8C7D06EFA923" modified="2018-04-25" version="1">MKNTGALKRRSTEEAPSLPIPNGPDGATIEPLGQVETVIVKDSWNKFLPFDEMLIEMFFERLLLDVPDLVDQFGPAIDQAPAEFLALIDRAVRALDPRRSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N2</accession>
    <name>A0A2M9P9N2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001096">
        <property type="protein sequence ID" value="PJN94248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8281" checksum="3F317477E52F9505" modified="2018-04-25" version="1">MSGANAWRILDMAGPETPPIPERLLRDTRGRPPAGRPSAEAEVRLRPDLCPSVEEASAEAAGYLDWVCCRRGCGCGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q9</accession>
    <name>A0A2M9P9Q9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Glutamate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_15415</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the Glu/Leu/Phe/Val dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001071">
        <property type="protein sequence ID" value="PJN94284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004353">
        <property type="term" value="F:glutamate dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01076">
        <property type="entry name" value="NAD_bind_1_Glu_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006095">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006096">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006097">
        <property type="entry name" value="Glu/Leu/Phe/Val_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014362">
        <property type="entry name" value="Glu_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033922">
        <property type="entry name" value="NAD_bind_Glu_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00208">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02812">
        <property type="entry name" value="ELFV_dehydrog_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000185">
        <property type="entry name" value="Glu_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00082">
        <property type="entry name" value="GLFDHDRGNASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00839">
        <property type="entry name" value="ELFV_dehydrog"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ELFV_dehydrog" evidence="7">
        <location>
            <begin position="138"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="3">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalysis" evidence="5">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000185-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000185-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000185-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="385" mass="41844" checksum="FE896B58969DC6CC" modified="2018-04-25" version="1" fragment="single">GAIHTFTGYRAVHSEHMEPVKGGIRYSLGVNQDEVEALAALMTYKCALVETPFGGSKGGLCIDPREWDEHELEQITRRFAYELVKRDLINPSQNVPAPDMGTGEREMAWIVDQYQRMNTTDINAAACVTGKPLNAGGIHGRVEATGRGVQYALREFFRHPEDVATARLSGGLEGKRVIVQGLGNVGFHAAKFLSEDDGCKVVGVIERDGAVMNPDGLPIEFLRAHIGATGGVKDFPQGTYVEQGASVLEAECDILIPAALESVIHMGNADRIQAPLIIEAANGPITSGADEVLRRRGAVIIPDLYANAGGVTVSYFEWVKNLSHIRFGRMQRRQEEAHYAMLVGEMERIIGEAGVPLGLSDKFKSEYVRGAGELELVRSGLDDTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA01</accession>
    <name>A0A2M9PA01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14980</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001027">
        <property type="protein sequence ID" value="PJN94363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5448" checksum="CBAEEF1F59FE8D4C" modified="2018-04-25" version="1" fragment="single">MSVHAKVATIPGSSMDGDFLGSYLETLAMVERLHRLLLDVVKDEFERLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA33</accession>
    <name>A0A2M9PA33_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">GTP 3',8-cyclase</fullName>
            <ecNumber evidence="4">4.1.99.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">moaA</name>
        <name evidence="14" type="ORF">CNY89_14730</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AH2 + GTP + S-adenosyl-L-methionine = (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate + 5'-deoxyadenosine + A + H(+) + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:49576"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.1.99.22"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.22" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01001002">
        <property type="protein sequence ID" value="PJN94403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019008">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061798">
        <property type="term" value="F:GTP 3',8'-cyclase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013483">
        <property type="entry name" value="MoaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000385">
        <property type="entry name" value="MoaA_NifB_PqqE_Fe-S-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010505">
        <property type="entry name" value="Mob_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06463">
        <property type="entry name" value="Mob_synth_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02666">
        <property type="entry name" value="moaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01305">
        <property type="entry name" value="MOAA_NIFB_PQQE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="12" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Radical SAM core" evidence="13">
        <location>
            <begin position="19"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="271"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="30133" checksum="3B45973B8D7F6A0D" modified="2018-04-25" version="1" fragment="single">MTETMPPIAAEAAPRLIDPFQRAISYLRVSVTDRCDFRCVYCMSEHMEFLPKAELLTLEELDRLCSAFVDLGVTKLRITGGEPLVRKNVMGFFRAMSRHLASGALEELTLTTNGSQLGRFAGELGDCGVRRVNVSLDTLDADRFKAITRWGRLSQVLDGIAAAEAAGLKVKINTVALKGVNDGEVHDLVAWCGDRGFDLTFIEVMPMGDMGEEDRLDQYWSLHDLRRELARRWTLTDTAERTGGPARYVRVGETGGRIGFITPLTHNFCES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD7</accession>
    <name>A0A2M9PAD7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000946">
        <property type="protein sequence ID" value="PJN94489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025103">
        <property type="entry name" value="DUF4011"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13195">
        <property type="entry name" value="DUF4011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="47745" checksum="37CC2EA463F7ED3D" modified="2018-04-25" version="1" fragment="single">PFEAETDARDTLEMTPAERLDRWKRSLLDLSKRNRLLNLRPSATALPVFCPDIAALEDMIAGGARIAMISPPPQRTAEGAIDPTLRLLRQGEDLDRTFAEEALARGELVVNADARTLEKGAIELYRKAKADFEEGGSNTLYLALGMLRWTPAGSKTAYRAPMVMLPVRLERRSAASRPKIARHEDDPVFNLTLLEMLRQDFHLTFPELEKGLPRDGQGVDIRRVWSLVRARVRDVPGFEVVEEVALSTFSFAKYLMWKDLADRTETLKTAPFVRHVIDTPRDVYAGGAAFLEPNRIDREIDPAALMAPLNADSSQIVAIHASGGRGDFVLEGPPGTGKSETIGNIIAHNLGLGRRVLFVSEKMAALDVVHDRLKKAGLGDFCLELHSARANKRAVLAQLDEAWSNRSERSAEEWERRARRLGGMREALN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE8</accession>
    <name>A0A2M9PAE8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000938">
        <property type="protein sequence ID" value="PJN94504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="219"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="31707" checksum="1580BD2066F7FFC9" modified="2018-04-25" version="1" fragment="single">MSAPQKTDPSASPLRDRKLLASRFLWSIASFGSSFGLRLASTVLLARLLDPHVLGVMVVINALRYGVELLSDVGIEQNVVQHARGAEPDFFNTAWTIQILRGALLTFVFLALAIPLGRLYEIEPQLLCAVAFAPLLNSAHSTSIFLLVRNLAVRSRMLFEFSAELVGFSATVLLVLVSPTAWSVVGGMLIGIGFRSLLSYRLPHPRHRLALHRVHARDILRFGGWMFLSSLLLFLSTNIDRLLLGRLAPLGMVGIYGIARSISDVPGQVAGRLSYQLLLPLFAARRRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK3</accession>
    <name>A0A2M9PAK3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000900">
        <property type="protein sequence ID" value="PJN94573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="431" mass="44320" checksum="B898288E7A6D54C5" modified="2018-04-25" version="1" fragment="single">MIRGGRGIGDGVVADLGDLGLTAVSPPQGGKFAGLVVDRPSLGASTLVGGLPGLGGILIPAAPRVLHIIIVWGQSLAVGADSAASRVTLSQPWPEDALMFDRAVGADVRMGLVTANLALTQVLDPEDLTGFRPLVASVGQGPGERGETVLEGCIKRLTGLARKANIQHRTLGIAIGTGSTAYDDLKQGTQSYANMIAAVGRAKELAEARGWRAIVDCVIVKHGEADSDNSGYAADLAELQADVDADFKAVTGQAADVHLFVAPPSSFGANTDAVRAMTAADGPLIHVVGADYVYADAYFTDFVHFNGAGYQLRGEDLALAIRDQLWGAGYKATKMLSGSRSGTTVTLTYQVPTPPLAIDTVAVSDPGQRGFQFFAGSTEIPITSVAVTDTGAGDGLGAIQLTLASAPSSGTERVDYALRLQTAPKTLAGVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ3</accession>
    <name>A0A2M9PAQ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000874">
        <property type="protein sequence ID" value="PJN94615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="37"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8363" checksum="55E21844719E9334" modified="2018-04-25" version="1" fragment="single">MTQPNPPSESEIDLVQGASWRLARRLGFLEEALAGTGLPPSSVHALIEIAARPGCTATDLAGALLLEKSSVSRLVRRLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ6</accession>
    <name>A0A2M9PAQ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000868">
        <property type="protein sequence ID" value="PJN94623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005546">
        <property type="entry name" value="Autotransporte_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036709">
        <property type="entry name" value="Autotransporte_beta_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006315">
        <property type="entry name" value="OM_autotransptr_brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03797">
        <property type="entry name" value="Autotransporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00869">
        <property type="entry name" value="Autotransporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103515">
        <property type="entry name" value="SSF103515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01414">
        <property type="entry name" value="autotrans_barl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51208">
        <property type="entry name" value="AUTOTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Autotransporter" evidence="1">
        <location>
            <begin position="1"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="26893" checksum="56ABBFC6B881EEC6" modified="2018-04-25" version="1" fragment="single">FDLDAVTTSIGGQARIDDGLFLGGALGWESSRLDDRRDSTRVEGDSYLAAVSLKRETGPWTLTGAVDLGWGDYDSARKIAFGTTSETAKGSPDAFTAGAHLRAAYEIPRGAWYMEPALDLDLIYVELDSYTESGAGEFNLAVDSADTVVLTGTPWLKLGRRVDLAGGGTLDAFVSGGVSFSSGEDFSTTARLAGAPSGAGDFTTEIDNPSVIGRISAGIDLYATDRLELRLQYDGSFADGQTSNGALFRLSYFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS6</accession>
    <name>A0A2M9PAS6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Elongation factor G</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">fusA</name>
        <name evidence="9" type="ORF">CNY89_13285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000853">
        <property type="protein sequence ID" value="PJN94643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16262">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01434">
        <property type="entry name" value="EFG_mtEFG1_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03713">
        <property type="entry name" value="EFG_mtEFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041095">
        <property type="entry name" value="EFG_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009022">
        <property type="entry name" value="EFG_III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035649">
        <property type="entry name" value="EFG_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005517">
        <property type="entry name" value="Transl_elong_EFG/EF2_IV"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14492">
        <property type="entry name" value="EFG_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03764">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00889">
        <property type="entry name" value="EFG_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 9" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EFG_IV" evidence="8">
        <location>
            <begin position="177"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="domain" description="EFG_C" evidence="7">
        <location>
            <begin position="297"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00017872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="389" mass="42445" checksum="28DFA730E44D79E0" modified="2018-04-25" version="1" fragment="single">ADDAQPFSGLAFKIMNDPFVGSLTFTRIYSGSIKKGDQLMNSTKEKRERVGRMMMMHAINREEIEEAYAGDIIALAGLKDTTTGDTLCDPTKPVVLETMTFPEPVIEIAVEPKTKNDQEKMAAGLARLAAEDPSFRVETDRESGQTIMKGMGELHLDILVDRLRREFKVEANIGAPQVAYRETISKSAEIDYTHKKQTGGSGQFARIKLLISPTEPGEGYSFESKVVGGTVPKEYIPGVEKGIQSVMDSGPLAGFPVIDFKVQLLDGAYHDVDSSVLAFEIASRAAMRDGLKKAGAKLLEPIMKVEVVTPDDYTGGIIGDLTSRRGQVTGQDSRGNAVAINAMVPLANMFGYINTLRSMSSGRANFTMQFDHYEAVPQNISDEIQAKFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW3</accession>
    <name>A0A2M9PAW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Levansucrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000843">
        <property type="protein sequence ID" value="PJN94659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6734" checksum="43963CC46E751453" modified="2018-04-25" version="1" fragment="single">WTVAPGPFLDGDTPCRRYAARIVETDEGLALLGFLHNPDGGPFVGEISDPTPILVDADGLLRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB21</accession>
    <name>A0A2M9PB21_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000804">
        <property type="protein sequence ID" value="PJN94731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="21583" checksum="092658DE6F51F7B6" modified="2018-04-25" version="1">MRGMSERQYAAHVGLSRGAIQKAKTAERLVLYPDGSINAAASDARRAETTDPSKTRKPPAPKLKPVPEAAVAAVGDTLREQGLAVPAVGGGTTFLQAKTANEVLKAQERRIRLQKLKGELIERARALALVFRLAREERDTWVNWPARAAALMAAELSASYSEATGQQITVEPAAMQKVLEKHVRAHLDELAEVRPDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB27</accession>
    <name>A0A2M9PB27_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glyco_trans_2-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12655</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000795">
        <property type="protein sequence ID" value="PJN94744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="265"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="481"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="481" mass="52212" checksum="22DE65CB0ECA57F8" modified="2018-04-25" version="1" fragment="single">MTREHARLLDYARSLEKRYAETLASTSWRALEPARWLSRRIKRRNSPKVFTPRLGVATAASPASGKADGQEESQGGAMALRLDDKLWGGFSAAALPELQALASDGDRPKSQRMEAFFALARWSHSHGDMEAALAAVQSMRKVDKRKSGVMRAILLEADCLMRLGRAEEARALLEEAQTRRPQNGDLHLALANCLLGPDGVAPPGADAVRLDRINRIYAGAGLAPLTLHDPARPLGIDNLATLPVAPETAPETASEGDAAALPKISVIMPVYAAAETLRFALRGLLAQSWGNLEIVIADDFSPDDTVAVAEAIAAEDARVKVVRQTENGGSYAARNAALRVVTGDFVTTHDADDWSHPQKLALQARFMAENPDVQGCFSDWVRVAPNMRAGWLFRPWGGYSSKNMSSIFLRRAAMEALGGWDPVRVGGDTDLLRRAEAIFGKEAIQRALPGTPLAFALHAERSLTRASATHVRTMLHGVRRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB73</accession>
    <name>A0A2M9PB73_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Extracytoplasmic solute receptor protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">TRAP transporter</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_12450</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Part of the tripartite ATP-independent periplasmic (TRAP) transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000777">
        <property type="protein sequence ID" value="PJN94778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031317">
        <property type="term" value="C:tripartite ATP-independent periplasmic transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026289">
        <property type="entry name" value="SBP_TakP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039026">
        <property type="entry name" value="SiaP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0574">Periplasm</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0732">Signal</keyword>
    <keyword evidence="3 6" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="9">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014696187" description="Extracytoplasmic solute receptor protein" evidence="9">
        <location>
            <begin position="28"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>a metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:25213"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR039026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR039026-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="370" mass="40287" checksum="250EBCB2399943F0" modified="2018-04-25" version="1">MNRRKFITGTALGSAAVAGAVASPAIAQSMPKVEWRCTSSFPKSLDTIYGGAEDVAKFVSEATDGQFNIKIYAAGEIVPGLQAADAVSNGTVEMCHTAAYYYVGKNPAYALGATVPFGLNTRGMQAWVLYGGGMDLLNEFYNTEGLQYFPAGNTGAQMGGWFRKEIASVGDMNGLKMRIGGLAGQVVEKLGVVPQQIAGGDIYPSLERGTIDAAEWIGPYDDEKLGFYKVAPYYYYPGWWEGNLILNMFVNTAKWAELPPAYQSLLVTAGKAATTEMMAEYDFKNPTAIRTLVANGTLLRPYPPDVMEACFIAAQGLYDEINAQNPAFKKIYDSMMAFRAETFLWQQVAEYSFDTFMMVKQREGALTMGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB6</accession>
    <name>A0A2M9PBB6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Prohead protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12155</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000746">
        <property type="protein sequence ID" value="PJN94827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008773">
        <property type="term" value="F:[protein-PII] uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018821">
        <property type="entry name" value="DUF294_put_nucleoTrafse_sb-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005105">
        <property type="entry name" value="GlnD_Uridyltrans_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03445">
        <property type="entry name" value="DUF294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10335">
        <property type="entry name" value="DUF294_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="6"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="3">
        <location>
            <begin position="71"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="392"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="435" mass="47281" checksum="2DB5DBE60D198FD3" modified="2018-04-25" version="1" fragment="single">PFTERVLRPPVTTPPDTPIVEALRTMAELRIGSMVVTDADRRPLGIFTLKDLLNRVALPGTPLDAPISAVMTPEPKSLPRTAFAFEAAMAMAHAGIQHVCIVEEGRLVGVVSERDLFSMQRVGLVTLSKSIQAARDLEELRRLGADIHQLVAQMVAQGMKVGQIGQIITLLNDQVVERVIDLTVAAIGAPEGLSFTWLAFGSEGRQEQTLKTDQDNGILFLLPEGMEPDLARARLLPFADRVNVALDAVGFPLCTGNIMARNPECCLSDREWRSRFLRWVTSSTPANLLNASIFFDFRPVWGPSGPAEDLRAWLLGVIADNPLFRRQMAANALRNGPPLGGMFRDFRLSGAGAEADTIDLKVNGVTPFVDAARILALSRRIGATGTVARVQARRPAGRSIRRTPPPGSTPTTTSVFCGCVATRSRPRRAVRWATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF2</accession>
    <name>A0A2M9PBF2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000727">
        <property type="protein sequence ID" value="PJN94860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="17936" checksum="E97455676FDF57D1" modified="2018-04-25" version="1" fragment="single">ARPNAKHARWNAVSFRMLGVTPPDPGEPSPPTVTPFVIRRSDLLASLEAVEARVGPVESFFARKRSEESEFALIHAAVAGSPGGVAGAFAPGLQHAATIRPKHDDALVDELLSLVEAGEMDVLSVHKRRLGKFNAEQNARLQAIWTAAGLDASELLAASEGRGSEAKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ1</accession>
    <name>A0A2M9PBQ1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Methyltransf_21 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000685">
        <property type="protein sequence ID" value="PJN94939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05050">
        <property type="entry name" value="Methyltransf_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransf_21" evidence="1">
        <location>
            <begin position="23"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="28685" checksum="3E2A0212EF69C10F" modified="2018-04-25" version="1" fragment="single">MARQFIADITPYFHARPIVYVDGGAHTGKILANLVESGFDLREAHLIEPNPKAFAALGQTVERLGGRIRRARLHNLALGAAPGRLRMTDAGSMSRVLGPAAEPEAAAPAAEGDFDVDCVTLDSLAWDFEDGHVSILKLDVEGSEPEALRGAAGLLSRQAIDVIYLEAGLSEGAVQQSYYRTLEDLLAGYGYRIFGIYEQTHEWPSDSPLLRRVNLGFMSERFAAANPHRLSRELYRLRVQSAALATEKDALAAEAEDLRSRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX3</accession>
    <name>A0A2M9PBX3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF2231 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000637">
        <property type="protein sequence ID" value="PJN95038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019251">
        <property type="entry name" value="DUF2231_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09990">
        <property type="entry name" value="DUF2231"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2231" evidence="2">
        <location>
            <begin position="64"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="17651" checksum="7572C3B68D077444" modified="2018-04-25" version="1">MRNDSGAETAQNPVLADVIEASTGSAVALAGHPIHAMLVHFPIALVIATLGIDVLYWWSADPFWIRVGLWSSGGAFGVGVLAALAGTAELLLVRGIRMRVASWTHAIAAMMLLSIAGTNWGLRLVDPEAALPQGLLLSALATVFTGLAGWHGGKLVLDHGVGRIISEKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ1</accession>
    <name>A0A2M9PBZ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">C4-dicarboxylate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000618">
        <property type="protein sequence ID" value="PJN95076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="28662" checksum="0D3499C474BD72EE" modified="2018-04-25" version="1">MQLTLEQSELAANAQVMNVPGAGGTIGLAQFINAPASPDRMIVAGLGMVGAIAVNKSPVTLEQVTPLARLIGEYQPLVVAASSPIQTLDDLAAMYRADPGAVTWGGFALGSPDHLISAMTVKAMGEDVSKMNYIVSGAGGEMLGQLLGGHITVATGGLNELAGLIETGQIRALAISSPERLPGFDIPTFKEQGYDVELVNWRGLLAKDDLSEADLAGMDETIDQMVATETWQALVKERGWVDMHQDSAEFAAFLETETPNIQQILGELGLTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM2</accession>
    <name>A0A2M9PCM2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000511">
        <property type="protein sequence ID" value="PJN95296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7514" checksum="352FF2DE96A896C0" modified="2018-04-25" version="1" fragment="single">SIVTIALLAALGQDEEVAMHVRATANTGATPEDVREALLHVAIYAGVPAANHAFKIVKKAYAEMGGEEGEKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN5</accession>
    <name>A0A2M9PCN5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000508">
        <property type="protein sequence ID" value="PJN95305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11576" checksum="EDFBBA8801CB3A13" modified="2018-04-25" version="1">MHHQPIPHTPSATETDTRAALAWALAQGLLQGDELAAASEPLEWNPHAQWLASPNWERGVFMIHLVWRATPRLRFDMLREQPHHVETRITFHLPAHVLAAGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU8</accession>
    <name>A0A2M9PCU8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">TPP_enzyme_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08880</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000481">
        <property type="protein sequence ID" value="PJN95369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000399">
        <property type="entry name" value="TPP-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045229">
        <property type="entry name" value="TPP_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18968">
        <property type="entry name" value="PTHR18968"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00187">
        <property type="entry name" value="TPP_ENZYMES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TPP_enzyme_C" evidence="3">
        <location>
            <begin position="64"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24629" checksum="8F4A4327A3F44704" modified="2018-04-25" version="1">MRSAYFPAGELARTPMRAAETRGEDGKIHPAAIFEAIRAVADPDYIAVADGGDLLSFARVGLEAKTYLDAGAFGCLGVGVPFAVAAALAHPERQVISINGDGAYGLNAMEIDTAVRHGARAVFIVSNNAAWNIERLDQRDNYGGRIVGTTLRHSDYAGMARALGLHAERVEDPAELEAALRRALDNAPAVIDVVTSQTVVSSDARKGLGFVPDFQPLTAWDDAERKRRGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV2</accession>
    <name>A0A2M9PCV2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Quinolinate synthase</fullName>
            <ecNumber evidence="2 9">2.5.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nadA</name>
        <name evidence="10" type="ORF">CNY89_08840</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>dihydroxyacetone phosphate + iminosuccinate = H(+) + 2 H2O + phosphate + quinolinate</text>
            <dbReference type="Rhea" id="RHEA:25888"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29959"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
            <dbReference type="EC" id="2.5.1.72"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from iminoaspartate: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the quinolinate synthase family. Type 2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.72" evidence="2 9"/>
    <dbReference type="EMBL" id="PHNO01000477">
        <property type="protein sequence ID" value="PJN95376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008987">
        <property type="term" value="F:quinolinate synthetase A activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10800">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00568">
        <property type="entry name" value="NadA_type2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003473">
        <property type="entry name" value="NadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036094">
        <property type="entry name" value="NadA_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023066">
        <property type="entry name" value="Quinolinate_synth_type2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30573">
        <property type="entry name" value="PTHR30573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02445">
        <property type="entry name" value="NadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142754">
        <property type="entry name" value="SSF142754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00550">
        <property type="entry name" value="nadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 9" id="KW-0408">Iron</keyword>
    <keyword evidence="8 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 9" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="150"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="region of interest" description="Iminoaspartate binding" evidence="9">
        <location>
            <begin position="235"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>iminosuccinate</name>
            <dbReference type="ChEBI" id="CHEBI:77875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="295"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="345" mass="37422" checksum="29188834C66D85C4" modified="2018-04-25" version="1">MRAALAAAYDLRPSLEKAEATRDIHARMSRVVPLADWAVHAPYVIEINRLKAEKNAVVLAHNYMTPEIYHGIGDVVGDSLQLAIAATEVDAQVIVQCGVHFMAETSKILNPAKTVLMPDMDAGCSLASSITAEGVAEMRRRYPGAPVVSYVNTTAEVKAASDVCCTSANALQIVEAMEGDTVIMTPDQYLARNVAALSTKRIVWWEGSCIVHELYTAADLRAYRAQDPEVKIIAHPECTPEVVAEADFTGSTGGIIDWVAKHRPAKAMLVTECSMASNISDALPDVEFAKPCNMCPYMKKITLEKVLYSLHTGLGEVTVDPQVSARARLAVERMIEISRRPAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV8</accession>
    <name>A0A2M9PCV8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000486">
        <property type="protein sequence ID" value="PJN95358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11033" checksum="4BA1207D7EACAB70" modified="2018-04-25" version="1">MKVQSAPTDWQPNATDWHAAMTDGHAPHVTACVLMQGVISVGQPISVHAQVAACVGQSAPRVMQGPAAVQATPQVSRVHAAVATWHRTGCVQAMPQVSRVHAAVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX1</accession>
    <name>A0A2M9PCX1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000473">
        <property type="protein sequence ID" value="PJN95389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16320" checksum="FB80BBC6EE7F4287" modified="2018-04-25" version="1">MSDPAGLRTLMQNARTRNAPAVYDAAFRRLANLVPEQEAGTLDFDFWKTTLAYEQTLTEKNGRATRATRLRQKVARVGVTRTLEDLATATTPSDGFEVLMARGMPELTAEAIVLQHRARFSEAAVEAAGRRLEASGADLAAYLPTPPEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH7</accession>
    <name>A0A2M9PDH7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07590</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000386">
        <property type="protein sequence ID" value="PJN95589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007410">
        <property type="entry name" value="PCuAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036182">
        <property type="entry name" value="PCuAC_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36302">
        <property type="entry name" value="PTHR36302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04314">
        <property type="entry name" value="PCuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110087">
        <property type="entry name" value="SSF110087"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014793124" evidence="1">
        <location>
            <begin position="20"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16090" checksum="6C97E3EEDDC025DB" modified="2018-04-25" version="1">MKTMLLICLVAFAPAAAQACSEVALGELTVTDAWSRATLGASRPGIFYVEIRNAGPRDDALLGLSTPAASMPMLHETVVKDGLATMPHAAAVPIPAGGVVQLAPGGFHGMLMGLTAPLTEGRSFPVTLTFREAGKVTVETQVQSIRSMAAECVGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR8</accession>
    <name>A0A2M9PDR8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000350">
        <property type="protein sequence ID" value="PJN95676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="24"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8576" checksum="752D4E93E89CECC2" modified="2018-04-25" version="1" fragment="single">MKGSVGSIHGPPVQRPSVSRCGCGGSGSPFNPQATNVASARQRPSRRSEGEHSYSISLALALCEGKVARVGRIWADGQQLDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE39</accession>
    <name>A0A2M9PE39_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000295">
        <property type="protein sequence ID" value="PJN95815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="138"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="171" mass="18772" checksum="D63FC3608927BE98" modified="2018-04-25" version="1" fragment="single">MAFELFGVHLWGEREEDDPFEVIDPLPFTVAFHVSGDDEALQGALESASGLYEGQDRPASGTGGLLARARGDYRRILAALYDNAYYGGEISIKLAGQEASEMTLDARLPANVPVVIRVKPGPRFKFGVARIVNPPPVKVGEDDEVEDKVGDAFRPGERANARRHHRRSSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE51</accession>
    <name>A0A2M9PE51_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sulfotransfer_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000307">
        <property type="protein sequence ID" value="PJN95784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000863">
        <property type="entry name" value="Sulfotransferase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00685">
        <property type="entry name" value="Sulfotransfer_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfotransfer_1" evidence="1">
        <location>
            <begin position="60"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="220" mass="24579" checksum="9C0680B730A5B311" modified="2018-04-25" version="1" fragment="single">DRDEAWARSRVMLGPTAPGHSAYADVLFQRYAGEPVVGEVTPEYALLSAEQLREMTRLGEDVRFILILRDPLGRLKSGLKQNLRKTKGAAAVTSEGLARHMEEAVADLRSPGMLRSRYELTIRALDEATSRDKVFFLFYETMFQQSEMDRLADFLGIARRPAPVTRKVHESNYGKVEFSPEAEARALAALAPTYDFVRARFGAAVPGKWHRPTVPVGEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE53</accession>
    <name>A0A2M9PE53_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xanthine dehydrogenase molybdopterin binding subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">xdhB</name>
        <name evidence="2" type="ORF">CNY89_06185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000290">
        <property type="protein sequence ID" value="PJN95830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000674">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014309">
        <property type="entry name" value="Xanthine_DH_Mopterin-bd_su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01315">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01008">
        <property type="entry name" value="Ald_Xan_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02965">
        <property type="entry name" value="xanthine_xdhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C" evidence="1">
        <location>
            <begin position="35"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="782" mass="85189" checksum="1BDF85751CDF6842" modified="2018-04-25" version="1">MRNPETATPKDAPDTEIRGAAHVSLAHESGHNHVTGFAEYIDDIPEPAGTLHACLGLSDRAHARIVSIDLSAVRAAPGVVDVMRPEDLPGHNDVSPVSRHDDPVFAEDTVEFHGQPVFAVIAETRDQARRAAKLAKIEYEDLPHVTDVAEALAANYPMVVDPLKLERGDVGAAMAAAPRKLSAQMRVGGQDHFYLEGMISLAVPGEDGDVTLYTSTQHPSEVQHMVAHVLGVASNNVTVNMRRMGGGFGGKETQGNLFAAVAAVAAKKWRRAVKIRPDRDDDMTATGKRHDFLIDYSVGFDDAGHIHAVEGSFAARCGFSADLSGPVTDRALFHADSSYFYPAVRLVSKPMKTNTVSNTAFRGFGGPQGMIAGERIVEDIAYTLGKDPLEIRRLNFYGGEGRNVTPYHQTVEDNVIGRIVDELEASSDYQARRKAMLEWNAKGGVIRKGIALTPVKFGISFTATWYNQAGALVHVYTDGSVQLNHGGTEMGQGLHTKVAQVLADEFQIDIDRIRVTATSTGKVPNTSATAASSGTDLNGMAAADAARQIKERLIAFACERWQTTAEEVRFIPNHVMVAGREIPFPELIREAYQARIQLSAAGFYKTPKIHWDRSTGRGRPFYYYAYGAACSEVSVDTLTGEYQVDRTDILHDAGKSLNPAIDIGQVEGGFIQGMGWLTTEELWWDAKGRLRTHAPSTYKIPLASDRPRIFNVKLAEWSENAEHTIKRSKAVGEPPFMLAISVLEALSMAAASVADYRIPPRMDAPATPERVLTTIERLRAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE86</accession>
    <name>A0A2M9PE86_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_06030</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000281">
        <property type="protein sequence ID" value="PJN95860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="48"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="83"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="181"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="12"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23435" checksum="B5AB71C1E7A61CE5" modified="2018-04-25" version="1">MAGLLPVILSYAPLTLGMASLAMAIALALAAMLAVVRVLKVPGLDRIVAVFISFFRGTPLLVQLFLFYYGLPQVIAAFRSIDGVTAAVAGLTLHFAAYMAESIRAAILGIDRSQWEAGQSIGMTQLQLMCRIILPQAARVAAPTLLNYYIDIIKSTSLAFTLGVTEMMGAAQKEAAGSFRYFEAFLVVACIYWAIVEALSFVQRRMETRLGRAFAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA3</accession>
    <name>A0A2M9PEA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000287">
        <property type="protein sequence ID" value="PJN95838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14387" checksum="F4D5B5246660E792" modified="2018-04-25" version="1" fragment="single">MVDPWPADVPYSLWRYHQLAAADRPQVPMMGVEFAPSFLYAFAFGVVFVAVFAWTRFNETNDRSSSGIAVIDTTEVGDLGGANALHRAYFIYAGALLLLYVAMTFFGKLILQTAQAIPLAGISVDVSELKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB2</accession>
    <name>A0A2M9PEB2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EamA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000286">
        <property type="protein sequence ID" value="PJN95844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="41"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="65"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="65"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="22896" checksum="F2977438F980D59C" modified="2018-04-25" version="1">MVVVFVKLGLIGAHAVFAVYPLLVAALAGPVLGEYVGWRRGVAILVGLAGVLVILRPGFQVFSPWALVALIAALMFAVYGLLTRLVASVDGAETSFFWTGVAAAGGLTLVAPFFWTPITEPLDMALMGVLCLTAILGHFVLIKAYSLAEAGVIQPFSYFQLVFIGIIGYSLFGERPDGWTLAGAGIILSAGLYALIREARISRKPLPIVPPGPAPEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC0</accession>
    <name>A0A2M9PEC0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amino acid ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000281">
        <property type="protein sequence ID" value="PJN95858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="17"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14416" checksum="E5720EC998E5962A" modified="2018-04-25" version="1" fragment="single">MIRVTGLSKRFGDRQVLDGVDLKIAPGERIAVIGPSGTGKSTLLRCLNFLDRPEAGRITVGDLTVDAARASRRDILALRRRTAFVFQNYALFANKTARQNIAEALTVVRRQPVAEATARADAILAEIGLADRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC9</accession>
    <name>A0A2M9PEC9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dienelactone hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05765</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000265">
        <property type="protein sequence ID" value="PJN95896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002925">
        <property type="entry name" value="Dienelactn_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01738">
        <property type="entry name" value="DLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="DLH" evidence="2">
        <location>
            <begin position="199"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="306" mass="33541" checksum="AFFCAC57F125E0B5" modified="2018-04-25" version="1">MTDEDRPQTLLRRLRWLFVFGGLFIGLWFAVVAGNSVGRYMGWMVPAESPGALAEQLRPYYRIAKPEGPGPFPTALLYSGCDGPSDAAERWSEMLVARGWAAIAVDSHSPRDFVDSDIWRLICAGQLLMGSERAGDVLVSIYDARRLPFVDPDRLALIGASHGGWAIMELLAFEKIWRLPFNLTALPEGAVEHPLQGVRGIVLAYPYCGAANRARRIGWRWPAPALFLLAENDSIAPADDCLEVAELLKAQGEPVETVVFPGATHGFDQQTRKPFSTLVFDPEIAAEALALAGDFLDRAIGEAPRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL5</accession>
    <name>A0A2M9PEL5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000233">
        <property type="protein sequence ID" value="PJN95991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11398" checksum="8FF13FB85C8E1ED3" modified="2018-04-25" version="1">MQNVDKICVNNMGGYVFNFSVQWLGADGVWHTSSWNSGNYPIDQSATSPELGSIGVPSDAIAVAPYGHAILGTSGQGHALVAYKQGANAVGTYNATGTTFINFDISLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX8</accession>
    <name>A0A2M9PEX8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_04885</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could be part of an ABC transporter complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the MlaE permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000214">
        <property type="protein sequence ID" value="PJN96044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003453">
        <property type="entry name" value="ABC_MlaE_Proteobac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030802">
        <property type="entry name" value="Permease_MalE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30188">
        <property type="entry name" value="PTHR30188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02405">
        <property type="entry name" value="MlaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00056">
        <property type="entry name" value="TIGR00056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="35"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="131"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="179"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="221"/>
            <end position="240"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="26246" checksum="908C8121F3B84130" modified="2018-04-25" version="1">MSGFAGEIIACFVLTLVRPWRLRVTALVHHMQDVGLNAIPIVALMAFLIGVVLGFMGAVQLRQFGAEVFVVDLISITVLRELGVLMTAIIVAGRTGSAYTAAIGSMKLREEIDAMRTLSLDPIENLVLPRILALVVMLPLLTFIANMSGLIGGATMAWAQLGISPPLFAARLTEAGDKWNFLVGMIKAPFFAVIIGLVGCYMGMKVEKSAESLGEKTSDSVVMAIFFVIVVDAFFAIYFMQVGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF38</accession>
    <name>A0A2M9PF38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sarcosine oxidase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000182">
        <property type="protein sequence ID" value="PJN96149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006278">
        <property type="entry name" value="SoxB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01373">
        <property type="entry name" value="soxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="34"/>
            <end position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="415" mass="44542" checksum="D980D5D0750AB658" modified="2018-04-25" version="1">MRYSALSIFLKGLAGNRGWTPAWRAPDPKPHYDVVIVGGGGHGLATAYYLAKEFGVANVAVLEKSYIGSGNVGRNTTIIRANYLLPGNNPFYQLSMDLWGGLEQDFNFNAMVSQRGILNLYHSDAQRDAYARRGNAMRLHGVDAELLDRAAVRERLPFLNFDDARFPIQGALLHRAGGTVRHDAVAWGYARGADSRGVDVIQGCEVTGIRREAGQVVGVETTRGFVGCGKLALAAAGNSSRVAEMAGLRLPIESHVLQAFVSEGLKPYLDTVVTFGAGHFYVSQSDKGGLVFGGDIDGYNSYAQRGNLALVEHVAEAGVALIPGLSRVRALRGWGGIMDMSMDGSPIIDRVGENLYLNAGWCYGGFKATPASGFCFAHLIARGAPQETAAAFRLDRFARGYTLDEKGVGAQANLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF75</accession>
    <name>A0A2M9PF75_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Heat-inducible transcription repressor HrcA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">hrcA</name>
        <name evidence="8" type="ORF">CNY89_04055</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the HrcA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000173">
        <property type="protein sequence ID" value="PJN96181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00081">
        <property type="entry name" value="HrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002571">
        <property type="entry name" value="HrcA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021153">
        <property type="entry name" value="HrcA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005104">
        <property type="entry name" value="WHTH_HrcA_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023120">
        <property type="entry name" value="WHTH_transcript_rep_HrcA_IDD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34824">
        <property type="entry name" value="PTHR34824"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01628">
        <property type="entry name" value="HrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03444">
        <property type="entry name" value="HrcA_DNA-bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005485">
        <property type="entry name" value="HrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00331">
        <property type="entry name" value="hrcA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0678">Repressor</keyword>
    <keyword evidence="3 5" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HrcA_DNA-bdg" evidence="7">
        <location>
            <begin position="5"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="HrcA" evidence="6">
        <location>
            <begin position="105"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="347" mass="37410" checksum="89FE93B1D3EF0356" modified="2018-04-25" version="1">MNERSREVFRRLVETYLSTGEPVGSRTLARSLTESLSAATIRNVMQDLELLGLLQAPHVSAGRIPTHSGLRLFVDGILEVGDVSGEERAEIEKSLGGKEGDIGAILDRAGDMLSGLTNGASLVLIPTASAPIRHIEFVSLGPDRVLVVLVTADGHVENRIFTPPQGLTPSAMREAANFLNAVLLGRTLGEVRGVVSAEIAKRRAELDALSQRLIEDGVAVWSQDGEAGRERLIVRGRAHLLEASEDAADLDRIRQLFDDLERKRDLAQLLDLTEGGEGVRVFIGAENKLFSLSGSALVVSPYMSADRRIIGAVGVIGPTRLNYGRIVPIVDYTAQLVGRLVSDRTRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD9</accession>
    <name>A0A2M9PFD9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03605</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000149">
        <property type="protein sequence ID" value="PJN96263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018653">
        <property type="entry name" value="ScfR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09856">
        <property type="entry name" value="ScfRs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="24"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="domain" description="ScfRs" evidence="2">
        <location>
            <begin position="105"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="28839" checksum="A6215AF4250C06B5" modified="2018-04-25" version="1">MVWPGASSAVAARSPVPKTSPGALHQIALLEHDDLIEATLDLARFHGPEARAICKVGLANYFAGAALLPYGRFLDHARALRHDLEALAGAFEASIEQVAQRLSNLQRIGAKGVPFFFVRVDRAGTITKRHSSTRLQFARFGGACPLWNVHSAFEAPGRILRQLAQTPDGARYLCLARDISKPGGSFRAPVRRYAIGLGCEVVHAEHLVYADDLDLKAEAAYEPIGISCRICERRDCHQRAVPPLERPLSVDFNSRDLLPYRIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL0</accession>
    <name>A0A2M9PFL0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="41" mass="4380" checksum="5C336DE99A10E8BF" modified="2018-04-25" version="1" fragment="single">MSDNDQPTGRQIAAARTLIGLQQAELAAAANISVPTLRRME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN0</accession>
    <name>A0A2M9PFN0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1,4-butanediol diacrylate esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000146">
        <property type="protein sequence ID" value="PJN96274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase" evidence="1">
        <location>
            <begin position="15"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="381" mass="41137" checksum="422DBEAD06672C0D" modified="2018-04-25" version="1" fragment="single">LHPDPGPEGKSRHPAMLGVGVHRLQVVERGGGVAMTEDTVFAIFSTTKAITGTTALQCVEEGLLDLDAPAKDYAPAIGRLQVLEGFDADGAPRLRAPRSDVTTRQLMLHVGGFGYDFFNENYRRMAEEHGQPSVVTSTRASIETPLLFDPGEKWEYGSNIDWVGQVVEGVRGKRLGAVMRERVFDPLGMDEIGFTRTPAMTARTAAIHARGADGSLTPLDLALPDAPEIDMGGHGLYATIGEYMKFIRMWLNDGAGPNGRVLKPETVAWAVKNGLEAHQKVGMLPGVIASLSNDAEFFPGLAKGWSYTFMTVEEEAPTGRPAGAIGWAGLANSFYWIDRANGFGGYWATQILPFGDPVSFGGYLDFETAAYRVLTRAEAIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ0</accession>
    <name>A0A2M9PFQ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000122">
        <property type="protein sequence ID" value="PJN96349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014670539" evidence="1">
        <location>
            <begin position="23"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="344" mass="37271" checksum="FC1380ADDF875FD8" modified="2018-04-25" version="1">MKHRHAIFGLRLLAAAALTALALPGAAQVDPLPSWNAGPAKQAVLDFVAATTTEGGPEFVPAAARIATFDQDGTLWVEHPVYSQLVYILDRVPALVKARPELAEAEPFKTVLTGDLAAIAKLPASDLEKLAAVALSGMTTDAFQTEVEGWLASARDKRWDRPYTDLTYQPMQEVMALLRDHDFKTYIVTGGGQDFVRTYSEATYGVPPEQVVGTAGEVSYGYGPDGAPILTKEPKMLLNDNDAGKPEGIHLMIGRRPLAAFGNTAGDRQMLEYAKAGEGARLAMLVMHDDAKGEYAYGPAQGLPDTKVGTFSQDLYDEAVRDGWVVISMKDDWNRIFAFEAKPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT7</accession>
    <name>A0A2M9PFT7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000112">
        <property type="protein sequence ID" value="PJN96382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023187">
        <property type="entry name" value="Tscrpt_reg_MarR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01117">
        <property type="entry name" value="HTH_MARR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="21"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="19469" checksum="00C940C5A29EA346" modified="2018-04-25" version="1">MAQGGFSMNPNRSEQLLFLTDEQLRQGIELMFFAYRGFTADPDRILGTRGYGRAHHRTIHFVNRNAGLTVNELLEILGVTKQSLNRVLRQLVEDGLIESRVGAVDRRQRNLHLTEAGRALEQELSEAQRRRMRAAFSLAGPDAVHGFRKVLEAMIDPETREVALRGLDMGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT9</accession>
    <name>A0A2M9PFT9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9679" checksum="C7F0D6CCA7F1B17B" modified="2018-04-25" version="1">MYRIPKQLTDQHKAAIAAAKRGKPRPPEVRAKIAASLSNRPDLRGAKGLTARLTAAEEVEYRFLTKRKGFRRREALEVIGRLDLIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV3</accession>
    <name>A0A2M9PFV3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000106">
        <property type="protein sequence ID" value="PJN96408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9308" checksum="76436D1C694E7017" modified="2018-04-25" version="1">MQARKIMRVWLRQTKVVLPAAAGLATMASGWSMTGPWDAPRGAEVLLAALATSLTLDLFLRRRKAAEGLPARARAKPLPMRGGAQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW5</accession>
    <name>A0A2M9PFW5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02510</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GST superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000096">
        <property type="protein sequence ID" value="PJN96445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="2">
        <location>
            <begin position="2"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="3">
        <location>
            <begin position="86"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="23884" checksum="90C83C0B0E101672" modified="2018-04-25" version="1">MAEYKLHCFAQSGNSYKPALLLALSGADWEPVFVDFFNGAARTPEFKALNEMGEAPVLDHGEVRLTQSGVILDYLSLRFRDFAPRSEADRREVLRWTLWDNHKLTSYTASLRFLRTFVPEEKRDPGVLAWLEGRARAAMKVLDGHLAEREWIVGERPTTADLSCVGYLYYDGELGYDVADYPNVDRWRQAIAALPGWAHPYQLMPGQTQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY9</accession>
    <name>A0A2M9PFY9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_02605</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000101">
        <property type="protein sequence ID" value="PJN96429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="204"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="276"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="430"/>
            <end position="468"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="468" mass="49526" checksum="8C8758C78FFF9A52" modified="2018-04-25" version="1">MTRSLPRWADLVLIPALNLALAFLAAGLVVLFIGEDPVKAVAILLEGSLGSSYAIGFTLFYATTFVFTGLAVAIAFHAGVFNIGGEGQAMLGGVGVSLVCLAVPWPHWTLALPAAILGAAVFGGAWAFLPGYLQAKRGSHVVITTIMFNFIASALVVYLLVRVLKAPGAMAPETRNFATGTHLPFIHDMLGAIGVPMRRTPMNLASILALIAAFGTWVLIWRTRLGYEIRAFGHSEPAAVYAGIDPVRITVLVMVLSGAMAGCMALNVVMGTQHRLVLDFVGGAGFVGIAVALMGQLTRGGCWRVLAELMFPKERLMAREFGNRLRDLLDARFPGHPVGGAWGDMAGEHGASQAADENDTWNRLVGKAAGFTVKPQRIGSNRIQPRLEAVRAALEFLHAGEPGLLIDGPACPLLHAGFEARYVWTDEVNASGDRRKVPARPTPASRASTTPPASPPRAPARPASACTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG04</accession>
    <name>A0A2M9PG04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000085">
        <property type="protein sequence ID" value="PJN96481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="516" mass="53883" checksum="E84CB940535AB4B1" modified="2018-04-25" version="1" fragment="single">AGAQQGALWGAGTGAAFGALAPLVSAGVGNVARYFKGTDTSAISHALGISGDAARAVKAAVEGDDLAMASQNLSRGGQNALLAEAGPSTQSLAKGVMASGGKATAIMRRGIDERVSRGAADARSAIDDAFKPGTAVVPAPPKLGTLYDAAYAKPIDYSKTAGRRIENLIHRVPKEEWAKARKLIEMDPDVPEEIKRQFLVSIAEDGTRTKGTLPSVLELDYVTRSLNDTAKAGDGKGALGGSTNQGRLYGKLANRLRDSIKEAVPEYRTALEFASTEIGVREAREFGAMVLRDSTTRAQVVEQFGNAPQAEKLAAKAAIREAIDDTLANTRRIMSRAGPDTDVGEAIKAVKNLTTRAARGKLATVLGGKEAARMTAGLDQAATAFELGAALSRNSDTAVNKAVQKSIERRSFDGLGDKIDISKPVQTVKAVAKMFIGRTPEAEAARQAGVYADIAKALTSIKGPAAERALHDVRRAIAGQSLSDAQSQRIGQVVTTALAGGGYQAVLQETRSLPPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG73</accession>
    <name>A0A2M9PG73_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01930</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000070">
        <property type="protein sequence ID" value="PJN96543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="8"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="249"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="40"/>
            <end position="47"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="497" mass="53862" checksum="4888A599217B2D21" modified="2018-04-25" version="1">MTDAAPFLRLRGLSKRFGGVQALSDIDWDVRRGEVHCLVGENGCGKSTLIKAIAGVHPPTTGSIEIDGVPVLPLDPAKAKALGVQVIFQDLSLFPNLTVAENIAVETTLGPALKPVSRAEMRRIAARVLTRLDFDLDLEALVSDLPVAERQITAIARGLAAEARLIFMDEPTASLTRAEVDRLLAIVARLQADGIAVVFVSHRLDEVVEIAERVTVLRDGRKVGTWPVAEVDQRRIANLMTGLDIETPIVARDMAAAPPLLEVRALSRRGEFADVTFTLRKGEVLGIVGLLGSGRTELALTLFGMNRAEGGAMLLEGEPLDPRTNREAVEAGVAYVSEDRLSLGVVLPQSIEDNIILAVTKKLTNRFGLMTPARRARMAADWVNRLRIKIPGLDRPVGTLSGGNQQRVVLAKWLATRPKVLILDSPTVGVDIKNKQGIYEVVAELARDGVGVILISDEVMEVFATCDRILHMRAGRIVGESVPGVVSEHEMEERIYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB8</accession>
    <name>A0A2M9PGB8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01640</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000059">
        <property type="protein sequence ID" value="PJN96593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="305" mass="34316" checksum="25BD0B63DD137FAE" modified="2018-04-25" version="1">MDWDKLRIFHSVAEAGSLTHAGEALHLSQSAVSRQIRALEESLDTTLFRRHARGLILTEQGELLFEATRSMARRLEATAARIRDSEDEVFGDLRVTTTTGFGSLWLAPRLPRLFERYPNLRLELMLEERILDLPMREADVAIRMKEPSQADLIRRRIMDVHIRFYASRAYAARMGLPQTPEELAAHRLVVQSPNSHQVRAGADLIQQFVGNAESLLMVNNYFGILQAVLNGIGIGSLPDYVSVSAPDLVPVLPNIVSATIPVYIAYVEELRHNKRVAAFRDFVLEEISAHKRDVASEPRPPVPPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL1</accession>
    <name>A0A2M9PGL1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 20">Methionine synthase</fullName>
            <ecNumber evidence="6 20">2.1.1.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="19 20">5-methyltetrahydrofolate--homocysteine methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="30" type="ORF">CNY89_01070</name>
    </gene>
    <organism evidence="30 31">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="30 31" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="30 31">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="18 20">Catalyzes the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 20">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + L-homocysteine = (6S)-5,6,7,8-tetrahydrofolate + L-methionine</text>
            <dbReference type="Rhea" id="RHEA:11172"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="EC" id="2.1.1.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 20 23">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 20 22">
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 20">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-methionine from L-homocysteine (MetH route): step 1/1.</text>
    </comment>
    <comment type="domain">
        <text evidence="20">Modular enzyme with four functionally distinct domains. The isolated Hcy-binding domain catalyzes methyl transfer from free methylcobalamin to homocysteine. The Hcy-binding domain in association with the pterin-binding domain catalyzes the methylation of cob(I)alamin by methyltetrahydrofolate and the methylation of homocysteine. The B12-binding domain binds the cofactor. The AdoMet activation domain binds S-adenosyl-L-methionine. Under aerobic conditions cob(I)alamin can be converted to inactive cob(II)alamin. Reductive methylation by S-adenosyl-L-methionine and flavodoxin regenerates methylcobalamin.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the vitamin-B12 dependent methionine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="30">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.13" evidence="6 20"/>
    <dbReference type="EMBL" id="PHNO01000037">
        <property type="protein sequence ID" value="PJN96685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00081"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008705">
        <property type="term" value="F:methionine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042558">
        <property type="term" value="P:pteridine-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02069">
        <property type="entry name" value="methionine_synthase_B12_BD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.196.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003759">
        <property type="entry name" value="Cbl-bd_cap"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003726">
        <property type="entry name" value="HCY_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036589">
        <property type="entry name" value="HCY_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033706">
        <property type="entry name" value="Met_synthase_B12-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011822">
        <property type="entry name" value="MetH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036594">
        <property type="entry name" value="Meth_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004223">
        <property type="entry name" value="VitB12-dep_Met_synth_activ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037010">
        <property type="entry name" value="VitB12-dep_Met_synth_activ_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02607">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02965">
        <property type="entry name" value="Met_synt_B12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00809">
        <property type="entry name" value="Pterin_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02574">
        <property type="entry name" value="S-methyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000381">
        <property type="entry name" value="MetH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01018">
        <property type="entry name" value="B12-binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47644">
        <property type="entry name" value="SSF47644"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56507">
        <property type="entry name" value="SSF56507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82282">
        <property type="entry name" value="SSF82282"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02082">
        <property type="entry name" value="metH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50974">
        <property type="entry name" value="ADOMET_ACTIVATION"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51337">
        <property type="entry name" value="B12_BINDING_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50970">
        <property type="entry name" value="HCY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 20" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="10 20 22" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="17 20 21" id="KW-0170">Cobalt</keyword>
    <keyword evidence="13 20 21" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16 20" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="8 20 24" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="31" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="14" id="KW-0677">Repeat</keyword>
    <keyword evidence="12 20 22" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="11 20 24" id="KW-0808">Transferase</keyword>
    <keyword evidence="15 20 21" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Hcy-binding" evidence="25">
        <location>
            <begin position="11"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="Pterin-binding" evidence="26">
        <location>
            <begin position="369"/>
            <end position="634"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding N-terminal" evidence="29">
        <location>
            <begin position="662"/>
            <end position="756"/>
        </location>
    </feature>
    <feature type="domain" description="B12-binding" evidence="28">
        <location>
            <begin position="762"/>
            <end position="898"/>
        </location>
    </feature>
    <feature type="domain" description="AdoMet activation" evidence="27">
        <location>
            <begin position="914"/>
            <end position="1244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Methylcob(III)alamin binding" evidence="22">
        <location>
            <begin position="772"/>
            <end position="776"/>
        </location>
    </feature>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="22">
        <location>
            <begin position="1206"/>
            <end position="1207"/>
        </location>
    </feature>
    <feature type="binding site" evidence="21 23">
        <location>
            <position position="260"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21 23">
        <location>
            <position position="323"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="21 23">
        <location>
            <position position="324"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="706"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="21">
        <location>
            <position position="775"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
        <ligandPart>
            <name>Co</name>
            <dbReference type="ChEBI" id="CHEBI:27638"/>
        </ligandPart>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="820"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="824"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="877"/>
        </location>
        <ligand>
            <name>methylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:28115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="964"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="22">
        <location>
            <position position="1151"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00023167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00025552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="19">
        <source>
            <dbReference type="ARBA" id="ARBA00031040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="20">
        <source>
            <dbReference type="PIRNR" id="PIRNR000381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="21">
        <source>
            <dbReference type="PIRSR" id="PIRSR000381-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="22">
        <source>
            <dbReference type="PIRSR" id="PIRSR000381-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="23">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="24">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="25">
        <source>
            <dbReference type="PROSITE" id="PS50970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="26">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="27">
        <source>
            <dbReference type="PROSITE" id="PS50974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="28">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="29">
        <source>
            <dbReference type="PROSITE" id="PS51337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="30">
        <source>
            <dbReference type="EMBL" id="PJN96685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="31">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="1252" mass="135923" checksum="C03AEEE8F23238EB" modified="2018-04-25" version="1">MRRSLPLSDAFAQIDVLARERILILDGAMGTQIQGLGLTEEDYAGGQDHGPGCGCAIHSDHPQKGNNDLLVLTQAEAIEEIHFRYAMAGADIVETNTFSSTRIAQADYGMEEAVRDMNVEAARIVRRALDRATAIDGKPRFVAGAVGPTNRTASMSPDVNDPGYRAVTFEDLRLAYAEQIRGLVVGGADLILIETIFDTLNAKAAIFAAEEVFASTGLRRPVMISGTITDRSGRTLSGQTPTAFWHSVRHARPLTIGLNCALGAAEMRAHLAEISSVADTLVCAYPNAGLPNEMGDYDESPEFMAGLIGGFAAEGLVNVVGGCCGSTPEHIRAIAAAVGGHAPRAIPEVAPLMRLSGLEPFTLTKDIPFVNVGERTNVTGSARFRKLITNRDYTAALDVARDQVENGAQIIDVNMDEGLIDSRQVMVDFLNLVAAEPDIARVPVMIDSSKWEVIEAGLQCVQGKPIVNSISLKEGEEAFLHHARLCRAYGAAVVVMAFDEQGQADTQARKVEICARAYRLLVEEAEFPPEDIIFDPNVFAVATGIEEHDNYGVDFIEATRRIVAELPHVHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQAGMDMGIVNAGQLAVYASIDPELREACEDVVLNRRPDGTERLLEIAERFRGAGAGPAREKDLAWREGSVDARISHALVNGITEFIEADTEEARLAAARPLDVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAVLLPYMEAEKAASGGGRESAGRILMATVKGDVHDIGKNIVGVVLACNNYEIVDLGVMVPPQRILEEARARDVDIIGLSGLITPSLDEMAHLASEMEREGFDIPLLIGGATTSKVHTAVKIAPRYTRGQAVYVTDASRAVGVVTALLSAAQKPDYVEGVRAEYREVAERHAKAELAKQRLPLAAARANALKLDWSGYEAPRPSFMGARVYDDWDLADLARYIDWTPFFQTWELKGVFPKILEDEKQGEAARTLYAEAQEMLARIVEGKWFRPRAVAGFWPANAVGDDIRLYAGDDRAEALATLHTLRQQVTKRDGRPNVALADFVMPEGQGPDWVGGFVVTAGPEEAEIAARFERANDDYAAIMVKALADRLAEALAERLHERVRRELWGYSDEAFAPQELIAEPYRGIRPAPGYPAQPDHTEKLTLFRLLDAEAATGVRLTESMAMWPGSSVSGLYLAHPDAYYFGVAKVERDQVEDYARRKGLEMAEAERWLAPVLNYVPAAASAVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH15</accession>
    <name>A0A2M9PH15_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7711" checksum="DDCB82D756AA3AE6" modified="2018-04-25" version="1" fragment="single">MSREPEAFWMVKGPGPASMRHDTRGSAEREAERLARANPGQSFYVLQAVALIRKIDVERIELCANEGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH35</accession>
    <name>A0A2M9PH35_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="16679" checksum="47CD9BE74B693DC5" modified="2018-04-25" version="1">MDVEITGEGEGLTATATLTRGDTGRKVVRSFSMADAKRAGLAGKPGPWQQYPTRMLSARARTFAVRDGAPDALMGLEVSEEVQNYGQDNARDVTPAAPRRGGAVYRTPEPAPVVDEIHEGEVVEPNPLPADYDPEAIAREAFAKTAADAAALEDEGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH36</accession>
    <name>A0A2M9PH36_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Aldose 1-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00075</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>alpha-D-glucose = beta-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:10264"/>
            <dbReference type="ChEBI" id="CHEBI:15903"/>
            <dbReference type="ChEBI" id="CHEBI:17925"/>
            <dbReference type="EC" id="5.1.3.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 3">Carbohydrate metabolism; hexose metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the aldose epimerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.3" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000002">
        <property type="protein sequence ID" value="PJN96868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00242"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004034">
        <property type="term" value="F:aldose 1-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019318">
        <property type="term" value="P:hexose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015443">
        <property type="entry name" value="Aldose_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008183">
        <property type="entry name" value="Aldose_1/G6P_1-epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01263">
        <property type="entry name" value="Aldose_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005096">
        <property type="entry name" value="GALM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="75"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="172"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="4">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="300"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="235"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR005096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR005096-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR005096-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR005096-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="335" mass="37522" checksum="97FF10EF1EF4B9B3" modified="2018-04-25" version="1">MKKRRFGEVEGREVSEITLESAQGAVSILNFGCVLRDWRVDGPKGSLPMTLGFPTMEGYLHHSRSHGAIVGRVANRVKDGRFELEGKTYELTKNHGPGLRHHIHGSLGRKIWDMDADSGAGVVHLRHVSPDGDDGYPGRVEFEVTYRLEGPRLVCEMRGRPDRPTPINLAHHAYFNLGGAGDVRDHVLWLDADEFTPLDAENIPLGTIASVEGTHLDFRQPRSIEVSDPERQGIDINYVLREGRHEDDPAAWAICPRTGRRIEVRTTEPGLQIFNAAKMTIEGKGHDGQSYGPFAGLCFEAQHFPDSIHHPDWPSVIRSPEHPYFQRWTVDILQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P448</accession>
    <name>A0A2M9P448_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004913">
        <property type="protein sequence ID" value="PJN92314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="7"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6969" checksum="7BB9CB72E49E1FBD" modified="2018-04-25" version="1" fragment="single">ESEPSTNIHALIGRNGVGKTTLLNHIVKAISRSKKTDAILYQQTVSFRRRPLESDFLATLFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P495</accession>
    <name>A0A2M9P495_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_30325</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004753">
        <property type="protein sequence ID" value="PJN92367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="9"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6759" checksum="D03AE4D6DD594371" modified="2018-04-25" version="1" fragment="single">APGRFDDKFDLSQQVQGVAVRPGSDALLAEINGVLAAAKTDGRLSAIHEKWLGSPLPEFVQAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A8</accession>
    <name>A0A2M9P4A8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004788">
        <property type="protein sequence ID" value="PJN92353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7018" checksum="BB07976113A1A257" modified="2018-04-25" version="1" fragment="single">TMIQILFTAGKPSLTKSCGRTFLRGSRETRAGLLILNDDPNSVHRRETIVDEVLRQDLPPGEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E6</accession>
    <name>A0A2M9P4E6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Adenosylcobinamide-GDP ribazoletransferase</fullName>
            <ecNumber evidence="7">2.7.8.26</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="18">Cobalamin synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="17">Cobalamin-5'-phosphate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">CNY89_29925</name>
    </gene>
    <organism evidence="19 20">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="19 20" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="19 20">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16">Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>adenosylcob(III)inamide-GDP + alpha-ribazole 5'-phosphate = adenosylcob(III)alamin 5'-phosphate + GMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23560"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57918"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="ChEBI" id="CHEBI:60493"/>
            <dbReference type="EC" id="2.7.8.26"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>adenosylcob(III)inamide-GDP + alpha-ribazole = adenosylcob(III)alamin + GMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16049"/>
            <dbReference type="ChEBI" id="CHEBI:10329"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:60487"/>
            <dbReference type="EC" id="2.7.8.26"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 7/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the CobS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="19">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.26" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01004618">
        <property type="protein sequence ID" value="PJN92414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00238"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051073">
        <property type="term" value="F:adenosylcobinamide-GDP ribazoletransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008818">
        <property type="term" value="F:cobalamin 5'-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003805">
        <property type="entry name" value="CobS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02654">
        <property type="entry name" value="CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="13" id="KW-0460">Magnesium</keyword>
    <keyword evidence="15" id="KW-0472">Membrane</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11 19" id="KW-0808">Transferase</keyword>
    <keyword evidence="12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="non-terminal residue" evidence="19">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00010561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00015850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00025228"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="ARBA" id="ARBA00032605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="ARBA" id="ARBA00032853"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="PJN92414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="2847" checksum="2DD2CED4CDB9EF5A" modified="2018-04-25" version="1" fragment="single">LGGYTGDCLGAVQQVSEVGFYLGLLACL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P0</accession>
    <name>A0A2M9P4P0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004357">
        <property type="protein sequence ID" value="PJN92489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="7657" checksum="10AF470C367103C4" modified="2018-04-25" version="1" fragment="single">QLLRLVRGGGRGGGRGAGGLRGDPRFGGRRRDLAAALGRPVKVANDANCFALSEAVDGAGAGAQVVFGVILGSGVGGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U5</accession>
    <name>A0A2M9P4U5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004170">
        <property type="protein sequence ID" value="PJN92549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9172" checksum="C3A871B507A26570" modified="2018-04-25" version="1" fragment="single">SQSDAPEIAGVEIRPLAQALSLDIHWARDVFGVFTETDQVRLVFVDGVFDPSQSDAPEIAGVEIRPLAQALSLDIHWARDVFGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z6</accession>
    <name>A0A2M9P4Z6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FGGY_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004022">
        <property type="protein sequence ID" value="PJN92595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGGY_C" evidence="1">
        <location>
            <begin position="33"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9000" checksum="26F5505BB99F23B7" modified="2018-04-25" version="1" fragment="single">DPRRGRDDGAGLGGAARSIARRRRGLGERLADAGLTRGTGHAHLVRAALEGMCHQTRDVVETTEQVSGVPLGALRADGGGSANGWLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P527</accession>
    <name>A0A2M9P527_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_27930</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003891">
        <property type="protein sequence ID" value="PJN92642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10017" checksum="C9DE16D235ABC756" modified="2018-04-25" version="1" fragment="single">DRGLRGVKLVIADDHKGLRAAARRVFDATHQRCRVHWLRNALAHAPAKQRAAVAAMLKTIFAQETRTEAIDQWGIVADALREKQPKLGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P543</accession>
    <name>A0A2M9P543_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003828">
        <property type="protein sequence ID" value="PJN92666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4338" checksum="1F3BB366A4E5A9D5" modified="2018-04-25" version="1" fragment="single">GLTPRRYESGETSRNGRISKQGNLMTRKHLYEAARRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A2</accession>
    <name>A0A2M9P5A2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003649">
        <property type="protein sequence ID" value="PJN92731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10852" checksum="7E7AE6732FB31904" modified="2018-04-25" version="1" fragment="single">SPRAVFLLVLPGKTLWLDGASQPIFQANALLGLQLTVDTALDYLRFFCFFVRSQGAPFYVVEDPGDPNLAELRRTRPELVESIARPASLETGVDGIFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J5</accession>
    <name>A0A2M9P5J5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">1,4-butanediol diacrylate esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003413">
        <property type="protein sequence ID" value="PJN92807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5769" checksum="A18677861CBB6E11" modified="2018-04-25" version="1" fragment="single">RAGTSAWAGILNTHWWVDPTAGVAGVLATQLLPFMDPGLIQTYDAFVRAAARGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L6</accession>
    <name>A0A2M9P5L6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23550</name>
        <name evidence="1" type="ORF">CNY89_26315</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003399">
        <property type="protein sequence ID" value="PJN92813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002568">
        <property type="protein sequence ID" value="PJN93118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11579" checksum="B37F5173AC070C2B" modified="2018-04-25" version="1" fragment="single">SKMRRGIHAKMIAAKAKKVPSIRVFQRESLARYTHLGKRRNFLRYAYKAADVMGCPEIRQQVCRHVTWFNRAWEREADRVYGGLVTTTIGILRATGWITG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q5</accession>
    <name>A0A2M9P5Q5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EH_Signature domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003240">
        <property type="protein sequence ID" value="PJN92859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028943">
        <property type="entry name" value="EH_Signature_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15611">
        <property type="entry name" value="EH_Signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EH_Signature" evidence="1">
        <location>
            <begin position="2"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF15611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="13173" checksum="FF7993DF7BEF867E" modified="2018-04-25" version="1" fragment="single">GENIRFFLDVSDDSGESHMWEPRRKFWLGLHEQDRIREAWVAFHPEAERVARRRPVGSSLSFGKQVAGGSRGDTSLLILEFNDFIVVEGSHNYKVHVFDKHNVKTPKLRQSYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V2</accession>
    <name>A0A2M9P5V2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RP-C_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003132">
        <property type="protein sequence ID" value="PJN92903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021760">
        <property type="entry name" value="RP-C_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11800">
        <property type="entry name" value="RP-C_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RP-C_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7933" checksum="C25E7A3A7833C558" modified="2018-04-25" version="1">MIGIPRVLMLKARAAMGWCEAAITVLCLLERFKHIRNPAGYLSHLTRQAEQGSFSLAVLLQATRASSHQIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y3</accession>
    <name>A0A2M9P5Y3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003021">
        <property type="protein sequence ID" value="PJN92947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_21" evidence="2">
        <location>
            <begin position="29"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="14379" checksum="72A3E2C9C0B746AC" modified="2018-04-25" version="1" fragment="single">SLEVSERRACSIIAADRSVVRYRAKRPVDAALRARLRELADQRRRFGYRRLHVLLRDEGWTMNRKKTQRLYREEGLAVRRRRSRRRIAVARTPIPRPDGPNSRWSTDFVHDQLANGRRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P682</accession>
    <name>A0A2M9P682_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage major capsid protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002843">
        <property type="protein sequence ID" value="PJN93020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024455">
        <property type="entry name" value="Phage_capsid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05065">
        <property type="entry name" value="Phage_capsid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01554">
        <property type="entry name" value="major_cap_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7629" checksum="1F20623B2B308515" modified="2018-04-25" version="1" fragment="single">TIDKFLTGAFQLGAQIFDREEATVEISTEDSDNFRKNLVTIRAEERLALAVYRPECFIKGDFSDALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I7</accession>
    <name>A0A2M9P6I7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002551">
        <property type="protein sequence ID" value="PJN93120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12118" checksum="3EB2FDB38EC80E18" modified="2018-04-25" version="1" fragment="single">MKLRSTATPKDAEIGALAALQLEIAQEMGGVYPFQWFPGSEHFGAGAAFNALLGLSSDVPARVVDLFMRIAPEDREGLDATRRRVLAGEERFDAEFRIVSEAGPRWVLARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L0</accession>
    <name>A0A2M9P6L0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002489">
        <property type="protein sequence ID" value="PJN93145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11534" checksum="F666162D7086D2E8" modified="2018-04-25" version="1" fragment="single">LRARYLAQACLACTVMFAPHLIVIGNDLESNDPSAEPIDKAINDEFRNLMDGREKRGQGIFSYEELADASSFISRAQSALGETTPTSGLQGRSDYAMRRQTPHTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S7</accession>
    <name>A0A2M9P6S7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002334">
        <property type="protein sequence ID" value="PJN93220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6640" checksum="134F9260AF4298CF" modified="2018-04-25" version="1" fragment="single">AAEAILGNVSEAREVARLLREARPDFVIDDMFGSVGLDGFGDLEDLRQGAALAGVPVSRPESI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U9</accession>
    <name>A0A2M9P6U9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2442 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22320</name>
        <name evidence="1" type="ORF">CNY89_25920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003262">
        <property type="protein sequence ID" value="PJN92853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002261">
        <property type="protein sequence ID" value="PJN93253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="3096" checksum="5733BB8627B90669" modified="2018-04-25" version="1" fragment="single">MRTLALETDPLAVDVTFSADVFRVALED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X6</accession>
    <name>A0A2M9P6X6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21710</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002101">
        <property type="protein sequence ID" value="PJN93324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9360" checksum="424D11BC6630B221" modified="2018-04-25" version="1" fragment="single">MRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSAPPPVATVAPRRNSQHAIPVADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P704</accession>
    <name>A0A2M9P704_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cation acetate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_22015</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002177">
        <property type="protein sequence ID" value="PJN93285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00474">
        <property type="entry name" value="SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="37"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="66"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16918" checksum="8DE658457D865B21" modified="2018-04-25" version="1" fragment="single">AVAVVCLLLISLTYVIGQMRGVGIAFANVLNLPIDTGLYVGMAIVFFYAVLGGMKGITYTQIAQYVIMIIAYTVPAVFISLTLTGHVFPQIGLGGDLAGTDSSLLSALDKTMVDIGFGAYTERPSMTTFNMFLLTLSLMIGTAGLPHVIIRFFTVPKIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P782</accession>
    <name>A0A2M9P782_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21285</name>
        <name evidence="6" type="ORF">CNY89_21340</name>
    </gene>
    <organism evidence="6 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002026">
        <property type="protein sequence ID" value="PJN93368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002015">
        <property type="protein sequence ID" value="PJN93372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6253" checksum="4965FAD15FD3C8D8" modified="2018-04-25" version="1" fragment="single">TEVVGIFPNEAAITRLVGAILLEQNDEWAVQRSRYMTLETIAPIQDDPVIGLPAMAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P789</accession>
    <name>A0A2M9P789_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001982">
        <property type="protein sequence ID" value="PJN93389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7813" checksum="DAFD75C246DA054B" modified="2018-04-25" version="1">MSRLSGLQRVAEADGAPTLEARAAFAFVPSMIVLYAFGDLPAERDIRTLYALHDGAGLERLWLGPALIWQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P794</accession>
    <name>A0A2M9P794_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001935">
        <property type="protein sequence ID" value="PJN93421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6320" checksum="26EEDC658D10D763" modified="2018-04-25" version="1" fragment="single">ALPSSYTTTWDTTAPHSGLDYRTPMEVLTAHVATTLEPLAGSALPLIAKHNAEDSSSARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S5</accession>
    <name>A0A2M9P7S5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001666">
        <property type="protein sequence ID" value="PJN93601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046854">
        <property type="term" value="P:phosphatidylinositol phosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020550">
        <property type="entry name" value="Inositol_monophosphatase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00630">
        <property type="entry name" value="IMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16479" checksum="2F388F147B78A7F3" modified="2018-04-25" version="1" fragment="single">AVSQRQMPAARNGTAAGLFFRSPLAGRFLSGRAERERMAPLHVSDPDPEALVVVASKSHRDKATDDYIARYPVKDFRSAGSSLKFCLVAAGEADLYPRLGRTMEWDTAAGQAVLLGAGGKVVRFDDHAPLVYGKPGFENPFFIACAPGVSLARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P836</accession>
    <name>A0A2M9P836_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptidase_M75 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001550">
        <property type="protein sequence ID" value="PJN93695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018976">
        <property type="entry name" value="Imelysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038352">
        <property type="entry name" value="Imelysin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09375">
        <property type="entry name" value="Peptidase_M75"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Peptidase_M75" evidence="3">
        <location>
            <begin position="38"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09375"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21785" checksum="CA07027FD5BB4EBD" modified="2018-04-25" version="1" fragment="single">VPLDVNGHGRQRVLSGAGHQRHASNVERGRPGPARADQRWQDPYAGYLVVPGPDNPMFLKPEDATRALFTAMISGLEATAGLRYARPLGEFMKPQPKRAEAWRTGRSDRNALLSVEAVQTLYEAAFAPELSQVARDRIGYAFDYALHEIQAATPMAEALETEGGRLRVESAMQSVKLLIAALSTDIGPAVGVAGGFNSMDGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P869</accession>
    <name>A0A2M9P869_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001521">
        <property type="protein sequence ID" value="PJN93718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="8608" checksum="684628B4BE7C855F" modified="2018-04-25" version="1" fragment="single">MQEVMMTDEQKDAISAALHKLITVTLRCSDTPDPDPSLVILGAKLAAMREIEAIVRAHDAVAGSTGAGGAAPAPGWGPGLPSTTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C9</accession>
    <name>A0A2M9P8C9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001452">
        <property type="protein sequence ID" value="PJN93789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14521" checksum="0E47003B8A1F2339" modified="2018-04-25" version="1" fragment="single">EGFLDDELDRWVKKLFESAYETVSLFNVDLWRPSLADEINDRAGDKMDRSEGFLDDELDRWVKKLFESAYETVSLFNVDLWRRVRVAEFVPAQRRPSQIPDDATRNPGDALSGADALRDGNIALPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D2</accession>
    <name>A0A2M9P8D2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001434">
        <property type="protein sequence ID" value="PJN93807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="9779" checksum="90C7003D3CF32B69" modified="2018-04-25" version="1" fragment="single">MTKISDTQAIVLSAAAQREDRIALPLPDSLRGGAAAKVVGAMIAKGFLQEVDADMRKGEPVWRETGDGHGVTLVATDAGLAAIGIEPEDAKAAPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D5</accession>
    <name>A0A2M9P8D5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001457">
        <property type="protein sequence ID" value="PJN93783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6522" checksum="BBB773F4E577B326" modified="2018-04-25" version="1" fragment="single">RKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G8</accession>
    <name>A0A2M9P8G8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Serine hydroxymethyltransferase</fullName>
            <ecNumber evidence="7">2.1.2.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">glyA</name>
        <name evidence="7" type="ORF">CNY89_18150</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SHMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.1" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01001416">
        <property type="protein sequence ID" value="PJN93831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019264">
        <property type="term" value="P:glycine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001085">
        <property type="entry name" value="Ser_HO-MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="PTHR11680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SHMT" evidence="6">
        <location>
            <begin position="10"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11654" checksum="230CB0B394593645" modified="2018-04-25" version="1" fragment="single">MLDTDARHLSDSAVAAAIGRELGRQQNQIELIASENIVSRDVLIAQGSVLTNKYAEGYPGKRYYGGCEFVDEVETLAIDRVKELFGAAFANVQPHSGAQANQAVFLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K9</accession>
    <name>A0A2M9P8K9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phosphate starvation-inducible protein PhoH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_17870</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PhoH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001383">
        <property type="protein sequence ID" value="PJN93876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003714">
        <property type="entry name" value="PhoH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02562">
        <property type="entry name" value="PhoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PhoH" evidence="4">
        <location>
            <begin position="14"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24542" checksum="D3B1BD9B00A0CE1A" modified="2018-04-25" version="1" fragment="single">SAEPLEIRTRKKVVEPRTPVQKDYVRALFRHELVFGLGPAGTGKTYLAVAAAAAMLIEGHVDKIILSRPAVEAGERLGFLPGDMKEKVDPYMQPLYDALNDFFPARQLQKMMEEKQIEIAPLAFMRGRTLANAFVVLDEAQNATTMQMKMFLTRLGEGSRMAITGDVTQIDLPRGVPSGLVEASKVLQGVEGIGFVRFTSADVVRHPLVAKIINAYEAAARSDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X9</accession>
    <name>A0A2M9P8X9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001286">
        <property type="protein sequence ID" value="PJN93990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045622">
        <property type="entry name" value="DUF6441"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20039">
        <property type="entry name" value="DUF6441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15535" checksum="593523D8E9D28EAF" modified="2018-04-25" version="1" fragment="single">GESLDAAALVWSKAPVIVGAHDTGPLIRSKSGFWLAIPLPAAGKSLRGGQITPGEWERRRGLRLRFVYRRTGPSLLVAEGRLNTKGQAVVSRSKTGRGKVTAPIFLLVPQVKLPKRLDLARDADRALDSVPGLIVANWVERRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z6</accession>
    <name>A0A2M9P8Z6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">L-asparaginase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17095</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the asparaginase 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001278">
        <property type="protein sequence ID" value="PJN94000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020827">
        <property type="entry name" value="Asparaginase/glutaminase_AS1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00144">
        <property type="entry name" value="ASN_GLN_ASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014902995" evidence="3">
        <location>
            <begin position="25"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010518"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="43" mass="4155" checksum="37F213EE4FB5AD9A" modified="2018-04-25" version="1" fragment="single">MFPASRRLASAALLAALAAQPALAQDKPHVVIVATGGTIAGAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P964</accession>
    <name>A0A2M9P964_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001225">
        <property type="protein sequence ID" value="PJN94071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10780" checksum="71DEE1E0A1C4FD45" modified="2018-04-25" version="1">MEEPPADQPAVEDPPVDQTAGANPPLPEDEEEDERAEFREELDAAFGGDKFDGQARATANRFATLAKHIADVVPKSQAQTVALRKLIKARNAVIRALASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A6</accession>
    <name>A0A2M9P9A6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phenol degradation protein meta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001193">
        <property type="protein sequence ID" value="PJN94113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025737">
        <property type="entry name" value="Phenol_MetA_deg_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13557">
        <property type="entry name" value="Phenol_MetA_deg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="22136" checksum="31302412E6384B08" modified="2018-04-25" version="1" fragment="single">GWKSIDVSATLTGPGGRTLNGERSWNDTLLGDPVVGGGLGWGGGPWFASANLLVNVPAGDYSAERTVNIAFNRWAADLSLATTWMGPDGWQSDFAVGLTVNGENPATDYRTGNELHFEAAAAKQIGAWNLGLAGYYYQQVTGDSGDGAVLGDFKGRVAAVGPAATWAGLWGRQTVSLDARWLHEFDARNRVEGDAIFFNLTFPLGAVKGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B8</accession>
    <name>A0A2M9P9B8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001186">
        <property type="protein sequence ID" value="PJN94120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10086" checksum="5382B895FC78AEC0" modified="2018-04-25" version="1" fragment="single">MRIATSDQASAVPRPSPPSPRTILSDYLVSNMVEEFSRIEGVGKVQVFGSQYRDADLGSTRPKLAAYDWPPGDVVPAPRRADTRRSSGGPVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E2</accession>
    <name>A0A2M9P9E2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell shape determination protein CcmA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001173">
        <property type="protein sequence ID" value="PJN94142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007607">
        <property type="entry name" value="BacA/B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35024">
        <property type="entry name" value="PTHR35024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04519">
        <property type="entry name" value="Bactofilin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="131"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16534" checksum="B08F4905E6243CFA" modified="2018-04-25" version="1" fragment="single">MFSKTRSSDPVPQPSPTPGGTESSEPRTGYASPAAQKKPAPSILSSDITITGDIRSTGDIQIEGSVEGDVRSAVVILGESATIRGEIVAEEVVVHGRVIGRLRGVKIRLSATARVEGDIVHKTIAIENGAHFEGSVQRQDDPTSQGASAPARISGPSRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E3</accession>
    <name>A0A2M9P9E3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001170">
        <property type="protein sequence ID" value="PJN94150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22977" checksum="D5F026D3720344EC" modified="2018-04-25" version="1" fragment="single">SGLTIQATGSVDYAGRHSLGPNSIQTVTGDTIRGSGSAGDRVNLTLGVGASVPLYTGGRNSSLIRQAQQVLEQRKFQVQDTGRQVIQQVGNAWTQLNVARASIVANKEQVVAAQVAFEGVTEEARLGARSTLDVLDSDQERLRAEAEVVRAQRDEYVAAYAVLRSMGLLTVEHLNLGIDSYNPDVYFAEVQRAPMGGYDTSVVDRIRARWEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E7</accession>
    <name>A0A2M9P9E7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ester cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001159">
        <property type="protein sequence ID" value="PJN94163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030638">
        <property type="term" value="P:polyketide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009959">
        <property type="entry name" value="Cyclase_SnoaL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38436">
        <property type="entry name" value="PTHR38436"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07366">
        <property type="entry name" value="SnoaL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15944" checksum="A9F64912566E28AD" modified="2018-04-25" version="1">MTINDAETGDVTTAHELRSLYRRYLACLNAQDWSCLGEFVHDKVSHNGRTFGLAGYRSMLESDFQQIPDLQFHVELLACESPVIAARLNFHCSPKGEFLGLPLNGRTVSFAENVFYEFEDRKIKTVWSVLDKTAIEEQLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F1</accession>
    <name>A0A2M9P9F1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001167">
        <property type="protein sequence ID" value="PJN94152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="1"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="21563" checksum="D4BC1AAF0AC12F3D" modified="2018-04-25" version="1" fragment="single">TGFIRQTLQAGKCDVVMGYAQGDELVLNTNHYYTSTHVIVTRADDELAEVDHLGDPRLQGRRIGVVAGSPPATHVARLGMMKDARPYDLMVDRRVENPAGDMLRDLEAGEIDAALLWGPIGGPLAQGNPALHVTPLLKEAGPPRLVFRITMGVRAGEDVWKRELNSQIRRDQTQIDAILREAGVPILDDFGKGLKPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F3</accession>
    <name>A0A2M9P9F3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001161">
        <property type="protein sequence ID" value="PJN94160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8483" checksum="FB20C8D0CD890906" modified="2018-04-25" version="1">MLQHIHRIVPFHWAITSFYVLVLLAAPLQVYSSTMLLEFLFGMGVAVLAARRRQPRRWPASRSVRCPGSGAGRSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G3</accession>
    <name>A0A2M9P9G3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001158">
        <property type="protein sequence ID" value="PJN94165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6874" checksum="1869B83ADBF67C2E" modified="2018-04-25" version="1">MAAMPVWLPPGAAGIDNIALPILLTPLLWAIPFFYACLEENLPRGVVVTLVAILSQAALAATAFVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M4</accession>
    <name>A0A2M9P9M4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15715</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001107">
        <property type="protein sequence ID" value="PJN94235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007698">
        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01262">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_N" evidence="2">
        <location>
            <begin position="24"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="AlaDh_PNT_C" evidence="1">
        <location>
            <begin position="147"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="22773" checksum="B4E6EEA6222DE539" modified="2018-04-25" version="1" fragment="single">MKALICDEPGRLSVIDRPEPEPAPGEALVRIRRVGVCGTDYHIFQGNQPYLAYPRVMGHELSGTVETAPEGSGLTPGQAVYVVPYLSCGACQACRRGLTNACQAISVLGVHRDGGMTELLALPARNVIPAGNVSLDDAAMIEFLAIGAHGVKRGGIKADERVLVVGSGPIGMAAIIFAKARGTHVTVMDTRADRLAFTIDRLGADQVLTAGAEAEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U3</accession>
    <name>A0A2M9P9U3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Heavy metal translocating P-type ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001058">
        <property type="protein sequence ID" value="PJN94305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="15"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="359"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="391" mass="40545" checksum="0C86664918D5A4EB" modified="2018-04-25" version="1" fragment="single">AQGSKLPIQALVDRVTLWFVPAVMAAAALTFLVWAIFGPEPAISFALVNAVAVLIIACPCAMGLATPTSIMVGTGRGAELGVLFRKGEALQSLKDARVVALDKTGTLTEGKPTLTDLETTGGRARNNVLALVASVEGKSEHPIARAIVEAAEADGLKLSDLTRFESVTGYGVSADVVGRRVEVGADRFMEKLGLDVGAFATIAARLADEGKSPLYAAVEGELAAIIAVSDPIKPSTPEAIRALHDLGLKVAMITGDNRRTADAIARQLGIDEVVAEVLPDGKVEAVRALKRQHRGLAYVGDGINDAPALAEADVGIAIGTGTDIAIEAADVVLMSGSLKGVPNAIALSKATIRNIRQNLFWAFAYNTALIPVAAGALYPTFGWLLSPVLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA70</accession>
    <name>A0A2M9PA70_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">FAS1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000976">
        <property type="protein sequence ID" value="PJN94438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036378">
        <property type="entry name" value="FAS1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000782">
        <property type="entry name" value="FAS1_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02469">
        <property type="entry name" value="Fasciclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00554">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82153">
        <property type="entry name" value="SSF82153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50213">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014793119" description="FAS1 domain-containing protein" evidence="1">
        <location>
            <begin position="24"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="FAS1" evidence="2">
        <location>
            <begin position="23"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="15697" checksum="A0B2A2A3E81CA234" modified="2018-04-25" version="1">MSLKSLLAGAAVAMTLASAPAMAETVAEILVRNPDLSTFVSAIEAAGLTEQIETAQTITVFAPTNEAFKALPPGVFDALQADKAKLKDVVLYHFVEGEVPSEKLKGSALSIAALNGKPLKDVIGDAAVVEADKRASNGVVHVIDTVLLTRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK8</accession>
    <name>A0A2M9PAK8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione-dependent reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000896">
        <property type="protein sequence ID" value="PJN94577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004364">
        <property type="term" value="F:glutathione transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016639">
        <property type="entry name" value="GST_Omega/GSH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32419">
        <property type="entry name" value="PTHR32419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13409">
        <property type="entry name" value="GST_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015753">
        <property type="entry name" value="GST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01206">
        <property type="entry name" value="Xi.1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="171"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="1">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR015753-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="322" mass="36090" checksum="2E5299A4134D4DF3" modified="2018-04-25" version="1">MGHLQNGEWRTDAGFAGSDGRFARSESRFRNWVTPDGAPGPSGAGGFEAESGRYHLYVSLACPWAHRALIFRKLKGLEPHLGVDVVHPLMLDDGWTFATDFPGATGDSLHGARFLREVYTRAEPQATTKVTVPVLWDKARETIVSNESSEIIRMFDSAFAEIADPGAPLWPADVQGEIEAVNARVYPGLNNGVYRAGFATTQAAYEEAAEEVFATLDWLEDRLRDRRWLLGERQTEADWRLFTTLLRFDAVYHGHFKCNRRRLVDYPNLWDYARALCQTPGVAGTVDFDHIAHHYYGSHRSINPTGVVPIGPAMDWTAPTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL1</accession>
    <name>A0A2M9PAL1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000905">
        <property type="protein sequence ID" value="PJN94564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7066" checksum="D878A95E7E2D1054" modified="2018-04-25" version="1" fragment="single">MATLAALVLAAGPLAAQSQRPPFLYINQERILTGSERGRALLAEEEAARNALRAEARRIETAFET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM5</accession>
    <name>A0A2M9PAM5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">UDP-glucose 6-dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_13740</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate</text>
            <dbReference type="Rhea" id="RHEA:23596"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58052"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="1.1.1.22"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nucleotide-sugar biosynthesis; UDP-alpha-D-glucuronate biosynthesis; UDP-alpha-D-glucuronate from UDP-alpha-D-glucose: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.22" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000903">
        <property type="protein sequence ID" value="PJN94569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00038">
        <property type="reaction ID" value="UER00491"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003979">
        <property type="term" value="F:UDP-glucose 6-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006065">
        <property type="term" value="P:UDP-glucuronate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028357">
        <property type="entry name" value="UDPglc_DH_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500134">
        <property type="entry name" value="UDPglc_DH_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="10">
        <location>
            <begin position="259"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="94"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8">
        <location>
            <begin position="194"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="7">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="149"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="208"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="266"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR500134-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="396" mass="42992" checksum="9918755F97C17B28" modified="2018-04-25" version="1" fragment="single">GRLNFTTDAAEGVAHGRVQFIAVGTPPDEDGSADLKYVLAVATTIAEHMAEPKVVINKSTVPVGTADKVTAKLKDVLTARGSDLAFHVVSNPEFLKEGAAVADCMKPDRIIVGTSSKDAEEILREVYAPFNRNHDKIIVMDVRSAELTKYAANCMLATKISFMNEIANLAERLGADVEAVRQGIGSDPRIGYHFIYPGAGYGGSCFPKDVKALIQTARGIGFDPLVLQAVEDRNDAQKEVTFEKISKHFGGDLKGRTIALWGLAFKPNTDDMREAASRVLMEALWDAGAKVQAYDPEAMEETQRIYGDRPDLALVGTKEAALRDADALVIMTEWQAFRAPDFDLIAEKLKQKVIFDGRNLFEPARMARRGFAYYAIGRGLTEPPAAQAPNAASDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB08</accession>
    <name>A0A2M9PB08_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Urease subunit beta</fullName>
            <ecNumber evidence="2">3.5.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Urea amidohydrolase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ureB</name>
        <name evidence="3" type="ORF">CNY89_12805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2 H(+) + H2O + urea = CO2 + 2 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:20557"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.1.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; urea degradation; CO(2) and NH(3) from urea (urease route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the urease beta subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.5" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000809">
        <property type="protein sequence ID" value="PJN94724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00258">
        <property type="reaction ID" value="UER00370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035550">
        <property type="term" value="C:urease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009039">
        <property type="term" value="F:urease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043419">
        <property type="term" value="P:urea catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00407">
        <property type="entry name" value="Urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.10.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01954">
        <property type="entry name" value="Urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002019">
        <property type="entry name" value="Urease_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036461">
        <property type="entry name" value="Urease_betasu_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00699">
        <property type="entry name" value="Urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51278">
        <property type="entry name" value="SSF51278"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00192">
        <property type="entry name" value="urease_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1 2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11138" checksum="1CCDCDF02641211E" modified="2018-04-25" version="1">MIPGELFPAPGEIELNADRPHLEMEVANTGDRPVQVGSHYHFAETNPALAFDRTASRGMRLDIPAGTAVRFEPGQTRMVKLVPYAGDRRIFGFRGEVMGDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB83</accession>
    <name>A0A2M9PB83_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000770">
        <property type="protein sequence ID" value="PJN94791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1320">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041916">
        <property type="entry name" value="Anti_sigma_zinc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13213" checksum="62E0A91AE8716A99" modified="2018-04-25" version="1">MDAVMDHETLAAFVDGALSPEDSAGVVMHLADHPLDAAHVDALMELNALLGEAYAAPLHEPAPEPIVAAILGTCVHVPKREIGMIALGLLHEALSGPPLPARRVELACYMVERNSVTWGPGAPKAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA4</accession>
    <name>A0A2M9PBA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Replication protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12270</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000759">
        <property type="protein sequence ID" value="PJN94811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16405">
        <property type="entry name" value="RepB_like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037972">
        <property type="entry name" value="RepB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040873">
        <property type="entry name" value="SoPB_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18090">
        <property type="entry name" value="SoPB_HTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="55"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="346" mass="38328" checksum="9C5805F1DA652252" modified="2018-04-25" version="1">MSSKNKNFMADLASAVEPAGEGQERGARLGMGVLGGRNNRLAQLASGAVVSNPQELVNPARCRIWERHNRDYGALTEERCRDLIDSILAQGRQEVPAVVRRIAGDPDHDFEVICGARRHWAVTWLRANNHPEIRYLVEIRDLTDEQAFRISDIENRAREDLSDLERARDYLKALDLYYGGRQKDMAKRLNQSEAWLSRYLDLARLPADLVAAFPDPFDLRISHIGTLKPLLKADDSRTAVLGEARRIRDARARGGEGLPTTAPEMLRALAAAANRPLPAPAKAPAARTPKRTGSAAVVLRNDAGAPLVRVDGKDRRGLSLTLFLRDGGSRAEAEAALRELLDHHWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI0</accession>
    <name>A0A2M9PBI0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000708">
        <property type="protein sequence ID" value="PJN94891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014670538" evidence="1">
        <location>
            <begin position="21"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="8811" checksum="A25243C3B57CCC89" modified="2018-04-25" version="1">MKRIILGAAFAGAFCAPAFAQDAATCADYMAADNTGRMAIAAELESTNSQAGDTANMSSADIQAKLDANCTAHPEMILIEVLKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR1</accession>
    <name>A0A2M9PBR1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Prohead protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000665">
        <property type="protein sequence ID" value="PJN94978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="24"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14959" checksum="633939377E8D0D37" modified="2018-04-25" version="1" fragment="single">MEGETMPQTEDGTDTAAFLRRHAPYDRMKPEHVAFLIERLRPIRFGPGEAVTDPQAGPAEWFYILREGRIRGEDADETLDGEAWDLVEGDCFPIGALSENRPVRHAQLAEGAAVCLTMERAAFETLRDLSPVFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC68</accession>
    <name>A0A2M9PC68_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000579">
        <property type="protein sequence ID" value="PJN95155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10731" checksum="5C1951F9D9A39DEC" modified="2018-04-25" version="1">MSSVRLTDGQVLHLPGMPFVTDSHSVIMAPAEDDLAALVPLIPAAELLLFTGRLVTGARKRRRQARYAEVNVARLKLARLCIDQALADWQAVQELPDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB1</accession>
    <name>A0A2M9PCB1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000579">
        <property type="protein sequence ID" value="PJN95154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7185" checksum="5B3F9C3D05C205A8" modified="2018-04-25" version="1">MREDALKIVARPDGQHEVQTTAGDVLAVCANNAAAWRWIDRNTGSGREDTDRHYRIRNSERFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP1</accession>
    <name>A0A2M9PCP1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000521">
        <property type="protein sequence ID" value="PJN95274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10611" checksum="D9D1CDB0E920C32E" modified="2018-04-25" version="1" fragment="single">MKLVAGYLVGLVFGLGIAVSGMINPAKVLNFFDVAGSWDPSLAFVMGGAVLVAFVGYRLVLGRPRPLLDPHFHLPKASAIDARLVGGAAIFGVGWGIAGFCPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS4</accession>
    <name>A0A2M9PCS4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000509">
        <property type="protein sequence ID" value="PJN95302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014916017" evidence="1">
        <location>
            <begin position="29"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15283" checksum="1C91508053F8D23E" modified="2018-04-25" version="1" fragment="single">MFRLLTLGCLAVAALGGTAGFAPLPAAAADYDIDCAVILCMAAGFPSEPSGTCSDAYDYMIDRITDRPPEPPFDTCTMSDGSTYDAAEVAFARPSRQSRVGWICPEPAPMGFDETADYTFTTPSCYPDAEYIPSVFEGGTWFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW3</accession>
    <name>A0A2M9PCW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000474">
        <property type="protein sequence ID" value="PJN95386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="363" mass="39095" checksum="82ADAD8596600489" modified="2018-04-25" version="1" fragment="single">MGDVEPEAGIPADLGASEAAERQAGPQVASEDPVPQAEIRAQIGRRITWATQQNDVPVIGEIVLANLGTEPLADLTLRLVCDPPVLGERFWPISAIAPGGELSLFDRRVTLAGGLLAKIDERMRAELTLELRKGETVLAEHRREIVALAHNEWGGGRHMPELLAAFVAPNDPAVARLLKDASEILRAAGRPGALEGYQSKSRARAWEIVSALWTAVVRRGLTYVEPPASFESEGQKIRLPSAVETQGLATCLDTAVLFAAAIEEAGLNPVIVFTEGHALAGAWLQPKSLPALAVEDVVDLRKAVDQSELVLFETTLACADRPVTFSDAVREARRQIDEAQESRFVFALDVKRARAQGIMPLPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX8</accession>
    <name>A0A2M9PCX8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">50S ribosomal protein L24</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rplX</name>
        <name evidence="6" type="ORF">CNY89_08815</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="3">One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 4">Belongs to the universal ribosomal protein uL24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000475">
        <property type="protein sequence ID" value="PJN95383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06089">
        <property type="entry name" value="KOW_RPL26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01326_B">
        <property type="entry name" value="Ribosomal_L24_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041988">
        <property type="entry name" value="KOW_RPL26/RPL24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003256">
        <property type="entry name" value="Ribosomal_L24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005825">
        <property type="entry name" value="Ribosomal_L24/26_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12903">
        <property type="entry name" value="PTHR12903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17136">
        <property type="entry name" value="ribosomal_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01079">
        <property type="entry name" value="rplX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01108">
        <property type="entry name" value="RIBOSOMAL_L24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KOW" evidence="5">
        <location>
            <begin position="4"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10756" checksum="A674E3E1B5AC3AC0" modified="2018-04-25" version="1">MAAKLRKGDKVVVIAGKDKGRQGEIARVMPKDNKAVVSGVNVALRHTRQSAQSQGGRVAKDMPIDLSNLALVDGNGKATRVGFRVEGDKKVRYAKTTGEAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD10</accession>
    <name>A0A2M9PD10_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Fe(3+) ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000458">
        <property type="protein sequence ID" value="PJN95420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026045">
        <property type="entry name" value="Ferric-bd"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002825">
        <property type="entry name" value="CfbpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014838535" evidence="3">
        <location>
            <begin position="24"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR002825-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="36903" checksum="359543F1D775F8BD" modified="2018-04-25" version="1">MSTNRPSLAALAVGLVLAIGAQAAAAQEINIYSSRHYDNDTALYDKFTAATGVKVNRIEGTADELIARMKAEGANSPADIYLTVDAGRIWLADKEGLLQPIESATLTERIPEHLRHPEGHWFGLSQRARVIFYDKERVPTPPQTYEALAQPDLKGKVCIRSATNIYNLSLMSAIIEHDGEEGAKAWATGLYDNLARQPEGGDTDQLKGLVSGACDVAVANTYYFARAQAETVEGLSEHVDEIGWVMPNQETTGTHMNIAAAGVAVNAPNKADAVKFLEYMVTDEAQAFFADQNHEFPVVAGVPVGPIAKEYGDFKTDTINLNVLGVNQPRAQAIFNEVGFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD27</accession>
    <name>A0A2M9PD27_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">TM2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_08545</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000456">
        <property type="protein sequence ID" value="PJN95428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007829">
        <property type="entry name" value="TM2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05154">
        <property type="entry name" value="TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="TM2" evidence="6">
        <location>
            <begin position="11"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF05154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="161" mass="17367" checksum="F517F19D99A96006" modified="2018-04-25" version="1">MATRVASEAPSPAVAFALWLLLGILSAHRFHLGRPGTAVLQILSNFVLLGFVWRLVDGVQIDRMIQQRRDALRLSRRTMGNIRQNLVWAFGYNVALIPVAAGALWPAWGMMLSPALAAGAMALSSVFVLTNALRLRFVKPVLGDPRGERAVAGSLAVAPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD33</accession>
    <name>A0A2M9PD33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AMP-dependent synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000447">
        <property type="protein sequence ID" value="PJN95446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="10"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="2">
        <location>
            <begin position="149"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="26391" checksum="834C961182740CFD" modified="2018-04-25" version="1" fragment="single">CARTAAASPAAGEPLGAELLDWGRGVFGRTINEFYGQTECNAVIGNCAAILRVRPGSAGRVIPGHDVAILDAQGRPCAPGETGEIAVRAPDPVMYLGYWNRPDKTAEKLVGGWLRTGDEARMDERGYVHFSARVDDVITSSGYRIGPSEIEDCLTGHPDVALAAVVGVPDPIRTEAVKAFVVLRAGAERAGLAEALAARVRSLVSPHVAPREVAFVDSLPMTDTGKIQRRVLRDGSAASQDLDLRLSPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD64</accession>
    <name>A0A2M9PD64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA--3-ketoacid-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08335</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000440">
        <property type="protein sequence ID" value="PJN95464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012792">
        <property type="entry name" value="3-oxoacid_CoA-transf_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004163">
        <property type="entry name" value="CoA_transf_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02429">
        <property type="entry name" value="pcaI_scoA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01273">
        <property type="entry name" value="COA_TRANSF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="232" mass="25019" checksum="E9F7BC72F08E4316" modified="2018-04-25" version="1">MKSKVYGTAGEALDGLLTDGMTIAAGGFGLCGIPELLIAAIRDNGVRDLTVASNNAGVDDFGLGLLLQTRQVKRMISSYVGENAEFMRQYLSGELELEFNPQGTLAERMRAGGAGIPGFYTRTGVGTVIAEGKEHKTFRGETYILEEGIFADLAIVKAWKGDAQGNLVYRKTARNFNPNAATCGRVCVAEVEEIVPVGSLDPDHIHTPGIFVHRIVQGPHEKRIEQRTLRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA0</accession>
    <name>A0A2M9PDA0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">GMP synthase [glutamine-hydrolyzing]</fullName>
            <ecNumber evidence="9">6.3.5.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">GMP synthetase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Glutamine amidotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 12" type="primary">guaA</name>
        <name evidence="12" type="ORF">CNY89_07985</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Catalyzes the synthesis of GMP from XMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + H2O + L-glutamine + XMP = AMP + diphosphate + GMP + 2 H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:11680"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.5.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Purine metabolism; GMP biosynthesis; GMP from XMP (L-Gln route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.2" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000415">
        <property type="protein sequence ID" value="PJN95525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00189">
        <property type="reaction ID" value="UER00296"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003922">
        <property type="term" value="F:GMP synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016462">
        <property type="term" value="F:pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01742">
        <property type="entry name" value="GATase1_GMP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01997">
        <property type="entry name" value="GMP_synthase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00344">
        <property type="entry name" value="GMP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001674">
        <property type="entry name" value="GMP_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004739">
        <property type="entry name" value="GMP_synth_GATase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022955">
        <property type="entry name" value="GMP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025777">
        <property type="entry name" value="GMPS_ATP_PPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00958">
        <property type="entry name" value="GMP_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00884">
        <property type="entry name" value="guaA_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00888">
        <property type="entry name" value="guaA_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51553">
        <property type="entry name" value="GMPS_ATP_PPASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 9 10" id="KW-0332">GMP biosynthesis</keyword>
    <keyword evidence="3 9 12" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMPS ATP-PPase" evidence="11">
        <location>
            <begin position="203"/>
            <end position="395"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="230"/>
            <end position="236"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="520" mass="56951" checksum="F5E46E01ECDAD059" modified="2018-04-25" version="1">MNEPEHQRLLIVDFGSQVTQLIARRLREAHVYCEIHPFQKVDAAFLAAFRPRAVILSGGPASVVDAGSPRAEPAIFELSVPVLGICYGQQTMMEQLGGKVEAGHAAEFGRAFVTPAGDQGHPLFEGLFGGGKEEVWMSHGDRVTELAPGFEVIGASGHAPFAIVADLDRNFFAVQFHPEVHHTPNGARLLKNFTDLAGFTGDWSMASYREEAIERIRAQVGSGRVLCALSGGVDSSVAAVLIHEAIGDQLTCVFVDTGLMREGEAEEVVTLFRDAYNIPLIHADEGDRFIDALEGVSDPEVKRKTIGRLFIEVFDHYATEVGDVDFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKLKLVEPLRELFKDEVRALGRTLGLPEKFVGRHPFPGPGLAIRCPGEVTREKLAILRRADAIYLDQIRRHGLYDAIWQAFAVLLPVRTVGVMGDGRTYDYACALRAVTSVDGMTADYYPFDHGFLSETATRIINEVKGINRITYDVTSKPPGTIEWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE9</accession>
    <name>A0A2M9PDE9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000410">
        <property type="protein sequence ID" value="PJN95538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14106" checksum="6C1D292B4FAF8A4D" modified="2018-04-25" version="1">MGGVAPRPGRRDFAAGAGNRRVGSRLVSETGRVRVWRLTPAPGERIGFPSHVLDYFWTALTPGRARSHHGGGEVREVAYQAGDTQHHRYGPGEWMIHDLENTGETALDFVTVEFLDSANAPLAVAEEATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF8</accession>
    <name>A0A2M9PDF8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000391">
        <property type="protein sequence ID" value="PJN95576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="31"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11030" checksum="9D7DD7BE1749A93F" modified="2018-04-25" version="1">MLGEVRDGITMVPLLFESGAIEKVLQAEKAATEQETGQNEASASQNVKGGRPRKISAALAAYDAVYPNGHRLVGDGWKDVALKISEHLGEPISIDTIQRALSSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH0</accession>
    <name>A0A2M9PDH0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PTS lactose transporter subunit IIC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000382">
        <property type="protein sequence ID" value="PJN95597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00211">
        <property type="entry name" value="PTS_IIA_fru"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016152">
        <property type="entry name" value="PTrfase/Anion_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002178">
        <property type="entry name" value="PTS_EIIA_type-2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00359">
        <property type="entry name" value="PTS_EIIA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55804">
        <property type="entry name" value="SSF55804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51094">
        <property type="entry name" value="PTS_EIIA_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00372">
        <property type="entry name" value="PTS_EIIA_TYPE_2_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PTS EIIA type-2" evidence="1">
        <location>
            <begin position="5"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16580" checksum="98AD1A9F9E1ED977" modified="2018-04-25" version="1">MELSQILGVDGIRAPLKATSKKRLLQDLADMAESVYGLSSETAFKALMEREALGPTGVGRGVAIPHARFAGVSHVIGLFVRLEKPVDFESIDRQPVDLVFALFAPETAGAEHLKALARVSRTLRSEAVCAKLRSTFDPSALYAILTETKSEQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL9</accession>
    <name>A0A2M9PDL9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000364">
        <property type="protein sequence ID" value="PJN95640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7263" checksum="4F6AF66B9175477F" modified="2018-04-25" version="1">MDFYATPMTTFSDPVLVGSDSSAPYATTIRNLGPGMWMVFAVAVDGGGVQAQSISSHIMVMPKEGMAHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS6</accession>
    <name>A0A2M9PDS6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">Aspartokinase</fullName>
            <ecNumber evidence="6 15">2.7.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">CNY89_06910</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>ATP + L-aspartate = 4-phospho-L-aspartate + ADP</text>
            <dbReference type="Rhea" id="RHEA:23776"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57535"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 16">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 16">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homoserine from L-aspartate: step 1/3.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 16">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 1/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the aspartokinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.4" evidence="6 15"/>
    <dbReference type="EMBL" id="PHNO01000338">
        <property type="protein sequence ID" value="PJN95707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00015"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00461"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00462"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004072">
        <property type="term" value="F:aspartate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd04261">
        <property type="entry name" value="AAK_AKii-LysC-BS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041740">
        <property type="entry name" value="AKii-LysC-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005260">
        <property type="entry name" value="Asp_kin_monofn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001341">
        <property type="entry name" value="Asp_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018042">
        <property type="entry name" value="Aspartate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027795">
        <property type="entry name" value="CASTOR_ACT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13840">
        <property type="entry name" value="ACT_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000726">
        <property type="entry name" value="Asp_kin"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00656">
        <property type="entry name" value="asp_kin_monofn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00657">
        <property type="entry name" value="asp_kinases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00324">
        <property type="entry name" value="ASPARTOKINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 16" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="12 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11 15 18" id="KW-0418">Kinase</keyword>
    <keyword evidence="13" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="10 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 15" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="17">
        <location>
            <begin position="264"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="7"/>
            <end position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="173"/>
            <end position="174"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="14">
        <location>
            <begin position="209"/>
            <end position="210"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00016273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PIRSR" id="PIRSR000726-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="RuleBase" id="RU003448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="RuleBase" id="RU004249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="PJN95707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="408" mass="43660" checksum="1EDE958F58DDE594" modified="2018-04-25" version="1">MPRLVMKFGGTSVADLSRIRSAAAKVKREVERGYDVAVVVSAMSGKTNELVGWVRDTSLLYDAREYDAVVSSGENVTAGLMALTLQEMGVPARSWQGWQVPLRTTSAHGAARIESIDTTNLLQKFGEGLHAVIAGFQGVSPEGRITTLGRGGSDTSAVAFAAALGAERCDIYTDVDGVYTTDPRITKKARKLEKISYEEMLELASLGAKVLQTRSVELAMRYKVRLQVLSSFSDAPGTLVCDEEEIVESKVVSGVAHSRDEAQVTLIQVPDRPGIAAAIFGPLAEAGVNVDMIVQNIAEGGRTDMTFSCPTDEVAKARAALDAAKAAGRIEFLEIESNEEVAKVSIVGIGMRSHAGVAHKMFSALAAEGVNIRVITTSEIKVSVLVDRKYMELAVQALHDAFELEKAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE07</accession>
    <name>A0A2M9PE07_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rplR</name>
        <name evidence="8" type="ORF">CNY89_06680</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the universal ribosomal protein uL18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000322">
        <property type="protein sequence ID" value="PJN95744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01337_B">
        <property type="entry name" value="Ribosomal_L18_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005484">
        <property type="entry name" value="Ribosomal_L18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004389">
        <property type="entry name" value="Ribosomal_L18_bac-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12899">
        <property type="entry name" value="PTHR12899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00861">
        <property type="entry name" value="Ribosomal_L18p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00060">
        <property type="entry name" value="L18_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12908" checksum="67A0D1E2B02F79DF" modified="2018-04-25" version="1">MANSKRDLFQKRRVRVRNKLKATANGRPRLSVHRSSKNISVQLIDDAQGRTLAAASTLEKDLGFVGKNNKEAAARVGAEIAARAKAAGVEEVYFDRGGFLFHGKVKALADAAREGGLKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA4</accession>
    <name>A0A2M9PEA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000289">
        <property type="protein sequence ID" value="PJN95834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038696">
        <property type="entry name" value="IalB_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010642">
        <property type="entry name" value="Invasion_prot_B"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06776">
        <property type="entry name" value="IalB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8356" checksum="E7E56E0ACE2DC941" modified="2018-04-25" version="1" fragment="single">RSGTIRSARSPGAPAIRAAAGRRRPLDDDLLDSLRRERSAEVTLTLLDQVRIRLPVSLLGLTAALKARDARASVVTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH0</accession>
    <name>A0A2M9PEH0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S6</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpsF</name>
        <name evidence="8" type="ORF">CNY89_05560</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Binds together with S18 to 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the bacterial ribosomal protein bS6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000252">
        <property type="protein sequence ID" value="PJN95936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00473">
        <property type="entry name" value="bS6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00360">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000529">
        <property type="entry name" value="Ribosomal_S6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020814">
        <property type="entry name" value="Ribosomal_S6_plastid/chlpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035980">
        <property type="entry name" value="Ribosomal_S6_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014717">
        <property type="entry name" value="Transl_elong_EF1B/ribosomal_S6"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21011">
        <property type="entry name" value="PTHR21011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01250">
        <property type="entry name" value="Ribosomal_S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54995">
        <property type="entry name" value="SSF54995"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00166">
        <property type="entry name" value="S6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="97"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="109"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00360"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14609" checksum="8D30ED5FDA1650A4" modified="2018-04-25" version="1">MALYEHVFIARQDISNAQAEGLIEHFGQVLSDNGGKVIGSEYWGLKTMAYKINKNRKGHYAYVRSDAPTAAVQEMERLMSIHEDVMRVLTVKVEAHEEGPSAVVQSKNQRDERGGDRDRGPRRPRRDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK2</accession>
    <name>A0A2M9PEK2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000243">
        <property type="protein sequence ID" value="PJN95966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014883583" evidence="1">
        <location>
            <begin position="25"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="18042" checksum="96DE118B60D108AB" modified="2018-04-25" version="1">MNRIFATASAALLALALTAPALTAQDLGLKQLQDSAVSNMAKLGMDTSMVEVLTLDELAQIQAITNSGESEQSQKGRLDTVLRTAEERIATGGAVVPTGPAGDIQASDLEGIDDVRHSVRAEIAELGLNTEVDVDKLTNDQLMQVNLTLQQSANESEKKMKVRELLQIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX7</accession>
    <name>A0A2M9PEX7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">WH2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000200">
        <property type="protein sequence ID" value="PJN96091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003779">
        <property type="term" value="F:actin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003124">
        <property type="entry name" value="WH2_dom"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51082">
        <property type="entry name" value="WH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="WH2" evidence="1">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="21587" checksum="AEC318B4D0BA5022" modified="2018-04-25" version="1">MTFRTDFLNSKILGLCGNDGRLVPPRGMGGQAQADELAALGRALDRLAPSSGYESWWSRFEDALLAAATTRAWPLIGDVERAAKSLREGDMRRASSPGTSSGIEPAHIYGIVEEWWLRFRDAGPASLPNAGHAKRLVEAGHAAYGELWRKGFPIPDSAREQAKAEKAPDHEAVLAEIRKMGERLRPTGIRNPAFAGAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF12</accession>
    <name>A0A2M9PF12_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000190">
        <property type="protein sequence ID" value="PJN96121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7733" checksum="92C409DEC435F843" modified="2018-04-25" version="1">MNAVKTQAIADVRLGTRQSAEDLVIAGLVTLPFAGCLMILINTGMNAPGPVGSGIALVALIAGTIWNAGWRARDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF26</accession>
    <name>A0A2M9PF26_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000199">
        <property type="protein sequence ID" value="PJN96094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="166"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="25898" checksum="3AFDA73033C240C9" modified="2018-04-25" version="1">MSSAAIRKNVTDTGKYDNQESRFAVIDSRKLERECFVRVIKASHTKLSITAYGSVQEWSEGPDREGPCVILLNIGGRRVGMPAVASSLQRLVAEAEDTPVIVLSESEDLRDMIAAIDCGARGYIPASVGVDVIIDAACLTSAGGIFLPASSLSALREAISKDTDRPLGIEQHFTSRQAAVADALRHGKANKSIAYELNMCESTVKVHIRTIMKKLRASNRTEAAFKLNALFPKEHDPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF34</accession>
    <name>A0A2M9PF34_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Adenylyl-sulfate kinase</fullName>
            <ecNumber evidence="7">2.7.1.25</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">APS kinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">ATP adenosine-5'-phosphosulfate 3'-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Adenosine-5'-phosphosulfate kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">cysC</name>
        <name evidence="11" type="ORF">CNY89_04180</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the synthesis of activated sulfate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>adenosine 5'-phosphosulfate + ATP = 3'-phosphoadenylyl sulfate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:24152"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58243"/>
            <dbReference type="ChEBI" id="CHEBI:58339"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.25"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Sulfur metabolism; hydrogen sulfide biosynthesis; sulfite from sulfate: step 2/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the APS kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.25" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000178">
        <property type="protein sequence ID" value="PJN96165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00140">
        <property type="reaction ID" value="UER00205"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004020">
        <property type="term" value="F:adenylylsulfate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004781">
        <property type="term" value="F:sulfate adenylyltransferase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070814">
        <property type="term" value="P:hydrogen sulfide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000103">
        <property type="term" value="P:sulfate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02027">
        <property type="entry name" value="APSK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00517">
        <property type="entry name" value="ATPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00065">
        <property type="entry name" value="Adenylyl_sulf_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002891">
        <property type="entry name" value="APS_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025980">
        <property type="entry name" value="ATP-Sase_PUA-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024951">
        <property type="entry name" value="Sulfurylase_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002650">
        <property type="entry name" value="Sulphate_adenylyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002547">
        <property type="entry name" value="tRNA-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01747">
        <property type="entry name" value="ATP-sulfurylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14306">
        <property type="entry name" value="PUA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01588">
        <property type="entry name" value="tRNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00455">
        <property type="entry name" value="apsK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00339">
        <property type="entry name" value="sopT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50886">
        <property type="entry name" value="TRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="4 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3 11" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="7" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 8" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="TRNA-binding" evidence="10">
        <location>
            <begin position="70"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="549"/>
            <end position="556"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="718" mass="80037" checksum="C58EA56BA5643539" modified="2018-04-25" version="1">MPTPTRSSPPASRPRWPSCATWPPRRPPRPDPRPAHLPTRCETACPSGAGGFFLGRPQHGGPMDQISFDDFLKVDIRVGRVTRAEPFPEARKPALKLWIDFGPEIGERRSSAQVAVHYDPDRLVGRLVMAVVNFPPRQIGESQPSSKGEYMAAPNLAPIPELFVSYDSAAKLKHQAGELLSWDLSARQVCDLELLMNGGFNPLKGFMSQADYDGVVTEMRLADGSLWPIPVTLDVTEAFAAKVEPGQDVALRDPEGVILAILSITDKWTPNKSREAEMVFGADDIAHPAVNYLHHKAGPVYLGGPIIGIQQPVHYDFRARRNTPNELRAYFRKLGWRRIVAFQTRNPLHRAHQELTFRAAREAQANLLIHPVVGLTKPGDIDHFTRVRCYEAVLDQYPAQTTALSLLNLAMRMGGPREAVWHGLIRRNHGCTHLIVGRDHAGPGKNSAGKDFYDPYGAQQLFAKHEAEIGVEMVDFKQMVYVQEKAQYEPRDEVAEGQTILDISGTELRRRLQEGLDIPDWFSFPSVVEELRRTKPPRAQQGFTVFFTGFSGSGKSTIANALMVKMMEMGGRPVTLLDGDLVRKHLSSELGFSKEHRDLNIRRIGYVASEITKNGGVAICAPIAPYAATRRAVREEIEAFGAFVEVHVATTIEECEKRDRKGLYKLAREGKIKEFTGISDPYDVPENPELRLETEGTDVDFCAQQVILKLEQMGLIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF41</accession>
    <name>A0A2M9PF41_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000187">
        <property type="protein sequence ID" value="PJN96132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008565">
        <property type="entry name" value="DUF847"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05838">
        <property type="entry name" value="Glyco_hydro_108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9330" checksum="546CD7D538FA268B" modified="2018-04-25" version="1">MRSVESIAAEIVRREGGFVNDPDDPGGATKHGVTLGTMRRLGLDLTGDGKVDVADVRALDPTRAAAIYVAHYFEEPKLKQRLPPSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF46</accession>
    <name>A0A2M9PF46_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000180">
        <property type="protein sequence ID" value="PJN96159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7258" checksum="B53B05548AB4B73E" modified="2018-04-25" version="1">MNRTADLSLEDFRRLPGLYRRWELTEVCEPNRNYQIEDAGAHADGTPLLAIYVAEPAPDVREAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF51</accession>
    <name>A0A2M9PF51_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L21</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rplU</name>
        <name evidence="6" type="ORF">CNY89_04310</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This protein binds to 23S rRNA in the presence of protein L20.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL21 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000184">
        <property type="protein sequence ID" value="PJN96142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036164">
        <property type="entry name" value="L21-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028909">
        <property type="entry name" value="L21p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001787">
        <property type="entry name" value="Ribosomal_L21"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21349">
        <property type="entry name" value="PTHR21349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00829">
        <property type="entry name" value="Ribosomal_L21p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141091">
        <property type="entry name" value="SSF141091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00061">
        <property type="entry name" value="L21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="5">
        <location>
            <begin position="33"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8207" checksum="16252B5BAEA8BDC7" modified="2018-04-25" version="1">MLGGDSVTIGAPRVEGAAVQAEVLEQTKGPKVISFKKRRRKHSSQRKRGHRQQLTRVRVTEILASGGDATGVKTAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF61</accession>
    <name>A0A2M9PF61_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000189">
        <property type="protein sequence ID" value="PJN96124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="1"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8462" checksum="6A0988CA9B31CFC6" modified="2018-04-25" version="1" fragment="single">QVDVIATGNVVAAAIIERNPPRTPELKFLVKNSPCYIGLNKNEPELLAAVNGIIAEMKADGSLNALSQKWLHADLPADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF82</accession>
    <name>A0A2M9PF82_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03900</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000165">
        <property type="protein sequence ID" value="PJN96210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="147"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="25028" checksum="7D89E22F6B16772A" modified="2018-04-25" version="1" fragment="single">MSAAARFLFRRRGGEGWHWTDVLSWIWLVGGLLVMFGPALWLVASSFKTPAALAEFPPTLLPYATKTATVEGFDKPLALYEVVQPDGSVKVLAEARRVGTMAQMVDPAQPGETLRVNIAERRPVRALSFSWSNYTEPFTQFDFLRYLWNSVFVTVMATVITLVVNSMAAFALSKYEFRGRGFAMLVILATLMVPLSVIMVPLYSIISSLGLFNSLWGVILPTVATP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM4</accession>
    <name>A0A2M9PFM4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SnoaL-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000128">
        <property type="protein sequence ID" value="PJN96328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037401">
        <property type="entry name" value="SnoaL-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13577">
        <property type="entry name" value="SnoaL_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SnoaL-like" evidence="1">
        <location>
            <begin position="7"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16527" checksum="46556CB07253CC68" modified="2018-04-25" version="1">MLDFVPVEDEQKIRRLYALYCHYFNHGEAEAWVDLFAPEGSFRRLNPSAAAPGQAANPAGAVAGHKALMEMARGRREMFQGLVRHQQTDIVVTPGEDADRASGVSFILLTDWRDGPGKIRAVGDCHAEFVRLAQGWRFSSITLSTLPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN4</accession>
    <name>A0A2M9PFN4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Heme ABC transporter ATP-binding protein CcmA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000126">
        <property type="protein sequence ID" value="PJN96339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="4760" checksum="C5062284D4C7F3BF" modified="2018-04-25" version="1" fragment="single">MGLAVTDLSLRREGRVIVSGLGFALAPGRALLLRGPNGVGKSTLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP4</accession>
    <name>A0A2M9PFP4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Class I poly(R)-hydroxyalkanoic acid synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_02915</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000114">
        <property type="protein sequence ID" value="PJN96377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010963">
        <property type="entry name" value="PHA_synth_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010941">
        <property type="entry name" value="PhaC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07167">
        <property type="entry name" value="PhaC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01838">
        <property type="entry name" value="PHA_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PhaC_N" evidence="5">
        <location>
            <begin position="93"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="593" mass="66647" checksum="266D8D98A3CE77B4" modified="2018-04-25" version="1">MTEVFDISSQIWKKFLATQLESGGGSANPDPLNTWPTFAELWRTMAENPKQVADMTLEYWSAQNALWQQSMMKWIGAAEPAEEFSAPFMAKPDRRFAHKEWSENALFDYLKRSYLLTSGWIQDTVGTVGEMDPKERKKAAFYTRQFVEAMNPANFFALNPEVLEATVNEKGENLVRGLKMMLADLERGKGKLLIRQTDMDAFEVGRNVAISPGAVVWQNDLLQLIQYAPTTEKVLAKPLVIVPPWINKYYVLDLNPKKSMVKWLVDQGHTVFMVSWVNPGAAQGSATWETYMDAVETAIDKALEETGQRSLHVASYCIGGTLTATLLAEMGRKKDKRVASATFFTAQLDFEDAGELQIFVDNKTIDVIGNDMQQGFMPADRMANAFNMLRANDLIWGYMVSNYMLGKDPFPFDLLYWNADSTAMPAKVHHFYLEQFYIKNAFANNCLSVDSHPVTLPEINVPVYHMAAKEDHIAPAASVYRGAKEMTNAEVRFVLAGSGHIAGVVNPPALGKYQHWINEDLSAPDLEAWCKDAEEIAGSWWPDWDAWLKKRSGRLVAPREPGAKLGVIEAAPGSYVRVRFDQEQILPDPVETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG29</accession>
    <name>A0A2M9PG29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Anion transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_02585</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000100">
        <property type="protein sequence ID" value="PJN96434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001898">
        <property type="entry name" value="SLC13A/DASS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00939">
        <property type="entry name" value="Na_sulph_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="27"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="58"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="214"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="314"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="351"/>
            <end position="370"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="382"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="414"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="443"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="468"/>
            <end position="495"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="507"/>
            <end position="531"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="533" mass="55959" checksum="6DF74C59C1A97EEA" modified="2018-04-25" version="1">MTDPIPQQGEYEEYTEEAAPGSRSARLVWGLRAFGLIAAAIDYVALGAASDLTPDGRWVATIGTLMAVWWMTEAIPLSATALLPIVLIPLLTERTVGQATAPYASSIVFLFLGGFLIAIAMEKWNLHRRIALLTLRKVGVEPRRIVLGLMLATGFLSMWVSNTATTLMMLPIGLSVLALVTSRSGAAAAAAGASHDHHRPGHVDPIQDDNLARFGICLMLAIAWSATMGGLGTLLGSPPNAIVAGYAADELGRKIGFLDWMMLGTPLAITFILIGWVMMTRVLYPFKLAEIPGGREMIEDEIRKLGTLSQGEKMVLLVFGSAAFLWVVPGLLAAIPGMADRLGPFGDMDDTAIAIAAGVSMFFLPARGRTEMVLTWKDAEDGLPWGVLLLFGGGLSLAGTVAASGLDGWFGQQVTGLGTLTPVLLIAAIVTIVLFLTEVTSNTATAATFIPVLGGVAVGIGADSMSLLIPAALAATCAFMLPVGTPPNAIVFGTGAVTIAQMARGGFVLNIIGIALITFFCYWIGGFALGLQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG40</accession>
    <name>A0A2M9PG40_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Chaperonin GroEL</fullName>
            <ecNumber evidence="6">5.6.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">60 kDa chaperonin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Chaperonin-60</fullName>
            <shortName evidence="6">Cpn60</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 10" type="primary">groL</name>
        <name evidence="6" type="synonym">groEL</name>
        <name evidence="10" type="ORF">CNY89_02135</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 8">Together with its co-chaperonin GroES, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">Forms a cylinder of 14 subunits composed of two heptameric rings stacked back-to-back. Interacts with the co-chaperonin GroES.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the chaperonin (HSP60) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.1.7" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000078">
        <property type="protein sequence ID" value="PJN96506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042026">
        <property type="term" value="P:protein refolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03344">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.7.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00600">
        <property type="entry name" value="CH60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018370">
        <property type="entry name" value="Chaperonin_Cpn60_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001844">
        <property type="entry name" value="Cpn60/GroEL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002423">
        <property type="entry name" value="Cpn60/GroEL/TCP-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027409">
        <property type="entry name" value="GroEL-like_apical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027413">
        <property type="entry name" value="GROEL-like_equatorial_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027410">
        <property type="entry name" value="TCP-1-like_intermed_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00118">
        <property type="entry name" value="Cpn60_TCP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00298">
        <property type="entry name" value="CHAPERONIN60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48592">
        <property type="entry name" value="SSF48592"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52029">
        <property type="entry name" value="SSF52029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54849">
        <property type="entry name" value="SSF54849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02348">
        <property type="entry name" value="GroEL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00296">
        <property type="entry name" value="CHAPERONINS_CPN60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="9">
        <location>
            <begin position="339"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="30"/>
            <end position="33"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="87"/>
            <end position="91"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="415"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="496"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000419"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="550" mass="57984" checksum="D76B7932EC039D67" modified="2018-04-25" version="1">MGAKLVKFNTDARNRMLKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGIEKAVSIVVEDIKAQAKTVSGSEEVAQVGTISANGEAEIGRQIADAMQKVGNEGVITVEENKGFETETEVVEGMQFDRGYLSPYFITNADKMIADLEDVVILLHEKKLSSLQPMVPLLEAVIQSQKPLLIIAEDVDGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQVISDDLGMKLENVGLDMLGKARKVTITKDETTIVDGHGEKAEIEARVAQIRSQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGASEIEVKERKDRVDDALNATRAAVQEGVVVGGGVALVRASKKLDGVTGDNADQTAGVTIVRKALQAPLRQIAENAGVDGSVVAGKIIESNDPAFGFNAQTEEYGDMFKFGVIDPAKVVRTALQDAASVAGLLITTEAMIAEKPEPKGQAGGGMGGGMGGMGGMDGMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG41</accession>
    <name>A0A2M9PG41_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02045</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000075">
        <property type="protein sequence ID" value="PJN96517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FCD" evidence="4">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13856" checksum="EA2123AA83452071" modified="2018-04-25" version="1" fragment="single">LLEPELASRALPRAHLALIDRMAAINGVIDEMVAKGDAAGYVRTNLEFHRTLYLRAQAPAFLGLIETVWLQSGPTMRMLYERLQRQQATENHRKIIAALRAGDEPGLRLAIRVDVTQGLRMLAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA6</accession>
    <name>A0A2M9PGA6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nitrogen regulatory protein P-II</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01780</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the P(II) protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000064">
        <property type="protein sequence ID" value="PJN96570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017918">
        <property type="entry name" value="N-reg_PII_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002332">
        <property type="entry name" value="N-reg_PII_urydylation_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30115">
        <property type="entry name" value="PTHR30115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039144">
        <property type="entry name" value="GlnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00638">
        <property type="entry name" value="PII_GLNB_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00496">
        <property type="entry name" value="PII_GLNB_UMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="O-UMP-tyrosine" evidence="4">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR039144-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR602187-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="12031" checksum="EE6C40134AC13B93" modified="2018-04-25" version="1">MKLIIAVIKPFKLEEVREALTAIGVQGLMVSEVKGYGRQSGHTEIYRGAEYVVNFVPKIKLELVVPAAAAAQVCETLAATAKTGKIGDGKIFVLDVEQAMRVRTGETGEEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC4</accession>
    <name>A0A2M9PGC4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">NADH-quinone oxidoreductase subunit H</fullName>
            <ecNumber evidence="5">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">NADH dehydrogenase I subunit H</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">NDH-1 subunit H</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">nuoH</name>
        <name evidence="7" type="ORF">CNY89_01680</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="5">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 6">Cell membrane</location>
            <topology evidence="5 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the complex I subunit 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000061">
        <property type="protein sequence ID" value="PJN96581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016655">
        <property type="term" value="F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01350">
        <property type="entry name" value="NDH1_NuoH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001694">
        <property type="entry name" value="NADH_UbQ_OxRdtase_su1/FPO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018086">
        <property type="entry name" value="NADH_UbQ_OxRdtase_su1_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11432">
        <property type="entry name" value="PTHR11432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00146">
        <property type="entry name" value="NADHdh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00668">
        <property type="entry name" value="COMPLEX1_ND1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 6" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-0874">Quinone</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="82"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="238"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="276"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="308"/>
            <end position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="343" mass="38263" checksum="CCBA63313AC95F64" modified="2018-04-25" version="1">MGFFDAGFGLFLLILLQCLAVTVFVLVCLAFLMYADRKVWAAVQMRRGPNIVGPWGLMQSFADFLKYIVKEIVVPAGADKTLFFLAPMISFVLPVIVWAVIPWAPGWVISDMNVGILFIFAISSLHVYAIIIGGWASNSKYPFLGALRSAAQMISYEVSLGLIIVGVLISAGSLNLSRIVEAQAGWGLLSWFWLPHFPMVALFFISALAETNRPPFDLPEAEAELVAGYQVEYSSTPFLLFMIGELMSVFFMCALMSVLFFGGWLSPIPGLPDGAIWMFGKMCVLFFLISMVKAIVPRYRYDQLMRIGWKVFLPLSLGWVVIVGLFAQYGWFWGAYQRWTIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC7</accession>
    <name>A0A2M9PGC7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta tubulin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000074">
        <property type="protein sequence ID" value="PJN96524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011928">
        <property type="entry name" value="Phage_phiJL001_Gp84"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018964">
        <property type="entry name" value="Phage_phiJL001_Gp84_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019228">
        <property type="entry name" value="Phage_phiJL001_Gp84_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09931">
        <property type="entry name" value="DUF2163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09356">
        <property type="entry name" value="Phage_BR0599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02218">
        <property type="entry name" value="phg_TIGR02218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2163" evidence="2">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Phage_BR0599" evidence="1">
        <location>
            <begin position="195"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31720" checksum="8105E99972D87A94" modified="2018-04-25" version="1">MKTLSPALQAHLDEGTTTLAWCWRITRADGASFGFTDHDRTLSFDGTDFEPESGLTASEVRSGSDLSVDAQDAEGVLTSDRITETDILDGRWDNAEVEVWRVNWADTSQRVLMRRGAIGQIRRGRLAFVAEVRSLAHVLGQTVGRTFQATCDAELGDARCGVNLENPAFKGTCAVIDLLRDRAFTASGLGGFTSGWFTFGTIEWTSGANAGRRTEVLGHDVTDGIAVLTLLEAPVRAIAEGDAFTIRAGCDKRMETCGANFTNTDNFRGFPHIPGQDAVLRYATKDGGHEGGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP1</accession>
    <name>A0A2M9PGP1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Nitrite reductase (NAD(P)H) small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nirD</name>
        <name evidence="6" type="ORF">CNY89_00975</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000033">
        <property type="protein sequence ID" value="PJN96706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012748">
        <property type="entry name" value="Rieske-like_NirD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13806">
        <property type="entry name" value="Rieske_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02378">
        <property type="entry name" value="nirD_assim_sml"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="5">
        <location>
            <begin position="5"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11655" checksum="47DEB55E43B736DF" modified="2018-04-25" version="1">MTQDWLDVGAVEDIPRRGGRVVKTPRGCIAVFRAADDAVFALDDRCPHKGGPLSDGIVHGHKVTCPLHSWVFSMETGEAQGTDEGRVRTHGVRVESGRILLDPAALRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ8</accession>
    <name>A0A2M9PGQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_00875</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000029">
        <property type="protein sequence ID" value="PJN96720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00035">
        <property type="entry name" value="HTHGNTR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="5">
        <location>
            <begin position="9"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="252"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="30648" checksum="C3DA106B0905CCDE" modified="2018-04-25" version="1" fragment="single">MNKDGIKGGSAAENTARHLEDLILEGSLRPGEPLLAEREMALRLSVSRPTLRQGMKLLEDKGLLVSEPGGGRVVAPLATSITDPLIELMSDRPEIVVEDYLELRATLERMAARLAAVRANDVDRDALRGCMERIDRAHDKADPHDEADADVELHLAVYEASHNIVLLQIMRALSGMLRRGVFHNREQLYARPEVREVLRDQHRAIHDAVLARDPEAAGKAAEEHMAYTLRVMSEIAAAEARLEISLRRIDGGSLTSPAARPGRRLKGARLRTSRGPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT7</accession>
    <name>A0A2M9PGT7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00660</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000020">
        <property type="protein sequence ID" value="PJN96757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="14"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="46"/>
            <end position="53"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="26240" checksum="9A2CCF3A12FFC923" modified="2018-04-25" version="1">MPEPARATAASPLLAVRDLEAWYGESHVLHGVDFDVRDGEVVTLLGRNGAGKTTTLKAIMGILGKRRGSVRFGGRELIDLPSRAIARAGIAICPEERGIFASLSVEENLMLPPVVRPGGLSVERILEMFPNLRERLSSQGTKLSGGEQQMLAIGRILRTGAKLLLLDEPTEGLAPVIVQQIGRTIAQLKTEGFTIVLVEQNFRFAASVADRHYVVETGKVIDMIPNEDLDANIDKLHAYLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH26</accession>
    <name>A0A2M9PH26_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Two-component system response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="13"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="20094" checksum="0E369EEBEEF70BC6" modified="2018-04-25" version="1">MTIEPDAPPQDRTLLLVDDDELFLRRLAVAMEKRGFQVTAVDSVAGGIAAVSASPPAYGVVDIRLGDGNGLDVVEALHARRPDCRIVVLTGYGAIATAVAAVKIGAWDYLSKPADANDLANILLTTGESRPEPAENPMTADRVRWEHIQRVYELCDRNVSETARRLNMHRRTLQRILAKRSPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH50</accession>
    <name>A0A2M9PH50_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000003">
        <property type="protein sequence ID" value="PJN96863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00043">
        <property type="entry name" value="GST_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="2"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="92"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="230" mass="25762" checksum="7C765C37288E6B3E" modified="2018-04-25" version="1" fragment="single">MASPIDLYYWPTPNGHKVSIALHEMDLPYTLHPVNIGKGDQFKPEFLAISPNNRMPAIVDPEGPDGAPISVFESGAILQYLGRKTGKFYGNTEAERVAIEEWLFWQVGGVGPMAGQAHHFLKYAPAMEPPQDLPYAKDRYRNEVGRLYGVLDKRLADRDYVAGEYSIADMAIWPWAKGWEGQEQDISRFPRMAAWLDRVGSRPAVEAGRALGAELRTDASQDKEAQKVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH72</accession>
    <name>A0A2M9PH72_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SCO family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SCO1/2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02968">
        <property type="entry name" value="SCO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003782">
        <property type="entry name" value="SCO1/SenC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12151">
        <property type="entry name" value="PTHR12151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02630">
        <property type="entry name" value="SCO1-SenC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="209" mass="22078" checksum="164F8C5FB4E95E6B" modified="2018-04-25" version="1">MTRIFAIAASALLLLLLVVLGLVALRRTSEQALTDCGDGIVLAEGAGAIGGPFTLTDGAGRRVTDAEVITGPTLIYFGYAFCPDICPTDLARNALAADLLAERGVETALVFITIDPERDTPEKVSAYAQSIHPGMIGLSGSAEDVSAAAKEYRVYYRKAGDDPDFYLMDHSTFTYLASPGRPFVTFFRSDATPEEVAESVACHSGSSGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P465</accession>
    <name>A0A2M9P465_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004907">
        <property type="protein sequence ID" value="PJN92315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="2"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7275" checksum="284BB1BA3CCE020E" modified="2018-04-25" version="1" fragment="single">EFVVFVGPSGCGKSTLLRSIAGLERVTSGAIEIRRQGMPPIETVALVGAHGVIKRWHIIGRRLFADF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P466</accession>
    <name>A0A2M9P466_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004902">
        <property type="protein sequence ID" value="PJN92319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="6881" checksum="F3AA09EE2381E5EC" modified="2018-04-25" version="1" fragment="single">EAGLPEVEVGIWHGLYAPAGTPQPVIEKLSAALAEAGLPEVEVGIWHGLYAPAGTPQPVIEKLSAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P473</accession>
    <name>A0A2M9P473_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Elongation factor Tu</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004808">
        <property type="protein sequence ID" value="PJN92346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="1"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7617" checksum="BF51AE35D82D208C" modified="2018-04-25" version="1" fragment="single">VGTIGHVDHGKTSLTAAITKFFGEFKAYDQIDAAPEERARGITISTAHVEYETENRHYAHVDCPGHADY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P490</accession>
    <name>A0A2M9P490_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004867">
        <property type="protein sequence ID" value="PJN92333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7775" checksum="E5EF2CEE84205BDD" modified="2018-04-25" version="1" fragment="single">EPGSPWENGYCESFNSKLRDELLNGELFYSLAEARIVIESWRQHYNTLRPHASLGYKPPAPATLLWPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K9</accession>
    <name>A0A2M9P4K9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004407">
        <property type="protein sequence ID" value="PJN92477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8306" checksum="F756C477F0920727" modified="2018-04-25" version="1" fragment="single">LNPDRLLRQATIMADALDITRERLLSYVFAHACLSASWSLEDSQDPSLALGVAKIVEECINAPSISHAVTVRNSSGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R0</accession>
    <name>A0A2M9P4R0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004217">
        <property type="protein sequence ID" value="PJN92534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9479" checksum="AE0214A003868A54" modified="2018-04-25" version="1" fragment="single">LQSPHKAHAENWHGKKSAYDPWHMNAELGRMRLLDLARALMARYNAQAVGLQSPHKAHAENWHGKKSAYDPWHMNAELGRMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T2</accession>
    <name>A0A2M9P4T2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004260">
        <property type="protein sequence ID" value="PJN92518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8926" checksum="6535B21C3DFE3DF8" modified="2018-04-25" version="1" fragment="single">RAGRDPGGQTRRRPRPGGDRAGRQGRLLARLRAADVSHRRDDAARPHPGRAGRDPGGQTRRRPRPGGDRAGRQGRLLARLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T8</accession>
    <name>A0A2M9P4T8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">COX4_pro_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004146">
        <property type="protein sequence ID" value="PJN92557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036596">
        <property type="entry name" value="Cyt-C_aa3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012422">
        <property type="entry name" value="Cyt_c_oxidase_su4_bac-aa3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07835">
        <property type="entry name" value="COX4_pro_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81469">
        <property type="entry name" value="SSF81469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COX4_pro_2" evidence="1">
        <location>
            <begin position="13"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4830" checksum="3F2E3355EF2C2405" modified="2018-04-25" version="1">MADHGDHETHVEHVRGTMDISDHERVFEGFLRFWVYVFAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V2</accession>
    <name>A0A2M9P4V2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phenol degradation protein meta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004207">
        <property type="protein sequence ID" value="PJN92538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="18"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4212" checksum="C6AFE5534A76A911" modified="2018-04-25" version="1" fragment="single">MLVTVPVGWKSIDVSATLTGPGGRTLNGERSWNDTLLGDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P515</accession>
    <name>A0A2M9P515_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the hydrolysis of UDP-3-O-myristoyl-N-acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003959">
        <property type="protein sequence ID" value="PJN92619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008759">
        <property type="term" value="F:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004463">
        <property type="entry name" value="UDP-acyl_GlcNac_deAcase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011334">
        <property type="entry name" value="UDP-acyl_GlcNac_deAcase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33694">
        <property type="entry name" value="PTHR33694"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03331">
        <property type="entry name" value="LpxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9542" checksum="315C1031FD98AE71" modified="2018-04-25" version="1" fragment="single">DIVNGVFVRELSDCRTFCRRADVDAMQAAGLALGGSLDNAIVVEGGEVLNPEGLRRDIVNGVFVRELSDCRTFCRRADVDAMQAAGLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P524</accession>
    <name>A0A2M9P524_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003867">
        <property type="protein sequence ID" value="PJN92646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9939" checksum="6956822FCB29C5EC" modified="2018-04-25" version="1" fragment="single">PPRHRSGCGGRCSPRNAAAAADRPPRRSPRPPRLGQPVGLVRADRQPPAGGRDLVQRRLHPVIGPGVAVDVLRVMQQQPRIGRLDDPLVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P563</accession>
    <name>A0A2M9P563_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003848">
        <property type="protein sequence ID" value="PJN92655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10487" checksum="4B77E5DBA6BBCCDF" modified="2018-04-25" version="1" fragment="single">ARVAFDEFLGELRDDLNDSITEADAIEMLAQHIITRPVFEVLFEGHQFTSENPVSRAMQRVLDVLDEANLDKESKDLEKFYASVQMRAKGIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B0</accession>
    <name>A0A2M9P5B0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003708">
        <property type="protein sequence ID" value="PJN92705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6991" checksum="E445BF686EE9B08A" modified="2018-04-25" version="1" fragment="single">MPRYKDTDGDSGIYAYEIGPDWIEVEFSRGKTRFYRYTYTSAGSGPVETMKRLAAQGDGLNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L1</accession>
    <name>A0A2M9P5L1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003289">
        <property type="protein sequence ID" value="PJN92844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12062" checksum="6934C4BE81E4A6F3" modified="2018-04-25" version="1" fragment="single">ELEASPEMRLIAETLMKARGSILDQIKVLDRRLMAVARANPTARLFMTVPGGWLITALSVASSFDASSRFKRSSSAGAIVGLTPRRYESGETSRNGRISKQGNLMTRKHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N5</accession>
    <name>A0A2M9P5N5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24555</name>
        <name evidence="1" type="ORF">CNY89_26175</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003348">
        <property type="protein sequence ID" value="PJN92828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002856">
        <property type="protein sequence ID" value="PJN93015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5610" checksum="CE1BC7062B985534" modified="2018-04-25" version="1" fragment="single">MPSYAALDVSQETTAICVVDEAGRILAEKKVATCPDAITSYLTQKAPDLVRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z3</accession>
    <name>A0A2M9P5Z3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002995">
        <property type="protein sequence ID" value="PJN92957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9778" checksum="8C1E9CBBEB98BD85" modified="2018-04-25" version="1">MPSTSVSIHRRITLSPISSTTSRSRLKQRLFRFERGIGWKTSEGMPEYRIGADLIAQLTGGDPDAEYALLRGHVRLREIPVDLLVVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P659</accession>
    <name>A0A2M9P659_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_24665</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002897">
        <property type="protein sequence ID" value="PJN93000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="17"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="18"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14364" checksum="E86B1DEBAF6AD731" modified="2018-04-25" version="1" fragment="single">GYIDGWRTSTPYTFARFFWNTFLIIAPKTLFTVISCAAVAYGFARFEFPGKKILFASLIATLLLPNVVTRIPQYLLFRDMGWLDTFLPLWVPSAFAGDAFFVFMLVQFLRSIPRDMEEAARVDGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P679</accession>
    <name>A0A2M9P679_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002731">
        <property type="protein sequence ID" value="PJN93061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12238" checksum="6DBFAB1B95A62E9F" modified="2018-04-25" version="1">MSDNGVGLEPVRFEAFCTTDTDYKITRGGKWVGRLLWLDVFEQIRLVSIFRDGERAFRRSFVFRLQSDEQITEEDLKEIEAAGSQTGTSITFCGLRGSGLPPFGGPDQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P685</accession>
    <name>A0A2M9P685_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002703">
        <property type="protein sequence ID" value="PJN93071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH crp-type" evidence="2">
        <location>
            <begin position="84"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14524" checksum="A52403A2CF88BAB1" modified="2018-04-25" version="1" fragment="single">TREGEQVIALHIPPGELFGIAPAFSRDTYPATAVAASESLALGWPTTLWPEFVAKYDGFATETYRTVGNRLAEFRDRVTEMATQAVERRVASALLRLANQSGRKIDDGVEIGFPVTRADIAEMTGTTLHTVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A9</accession>
    <name>A0A2M9P6A9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23645</name>
        <name evidence="2" type="ORF">CNY89_24215</name>
        <name evidence="1" type="ORF">CNY89_28840</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004209">
        <property type="protein sequence ID" value="PJN92537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002759">
        <property type="protein sequence ID" value="PJN93048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002596">
        <property type="protein sequence ID" value="PJN93107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6199" checksum="EC72F797451ACAC3" modified="2018-04-25" version="1" fragment="single">MAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L3</accession>
    <name>A0A2M9P6L3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002480">
        <property type="protein sequence ID" value="PJN93149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15346" checksum="50DCD36525D1C88F" modified="2018-04-25" version="1" fragment="single">AAVEHARSTGVAAVPQVPVIEVPGMIAPRDGRIPKGRLVTLAEIGSLIDAAATDKAGEPSLYPHVLHQLLIHIGSGARSGAVFELTEPQVLTSLGVFDLRRYHATEDRSKPRGIVPISGPLWWVFDNARETIGRDGCVVHYRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M0</accession>
    <name>A0A2M9P6M0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002346">
        <property type="protein sequence ID" value="PJN93211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15302" checksum="DF6B03D52CBA6585" modified="2018-04-25" version="1" fragment="single">QTAYLSRRRCWMDDVEHGGAADAETSNIGAVAAPGRERRMTAGRKRDAVLRLLRGEPLEIVAREFGVTAADLSGWRDAFLDAGAASLKSRARDDRDETIDRLRTKVGELTMDTELLYAKIERLEAGGGGIPFAARRSKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M3</accession>
    <name>A0A2M9P6M3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002457">
        <property type="protein sequence ID" value="PJN93158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014806046" evidence="1">
        <location>
            <begin position="24"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3738" checksum="6091422BE2588477" modified="2018-04-25" version="1" fragment="single">MTIAKTILAAAVAATAFSTPLLAQDAEFQLPEQCTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W1</accession>
    <name>A0A2M9P6W1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DDE_Tnp_IS66 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002246">
        <property type="protein sequence ID" value="PJN93259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="39"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11051" checksum="1BF09CF841415DDB" modified="2018-04-25" version="1" fragment="single">MRMAVPHGHWKTTTLVAGLGARGVVAPWVLDGPLDRPESGWTLVHCWSHVRRRFVKVLQSTRSPVAETMIRYIAGLYAVEKAVRGHSPDARLAARRQLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P701</accession>
    <name>A0A2M9P701_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate-semialdehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002166">
        <property type="protein sequence ID" value="PJN93290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dhC" evidence="1">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16560" checksum="33F91D3DD21AFBBC" modified="2018-04-25" version="1" fragment="single">PHIDVFLEDGTTKEEWKMVAETKKILDPKIKLTATCVRVPVFVGHSEAINIEFEEHLDEAEARDILRESPGIMVVDKREAGGYVTPVDCVGDYATYVSRIRQDSTIDNGINLWCVSDNLRKGAALNAVQIAELLVRRVLEPARREAAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P732</accession>
    <name>A0A2M9P732_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_21745</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002110">
        <property type="protein sequence ID" value="PJN93318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8383" checksum="27BAAFB7BC4179B0" modified="2018-04-25" version="1" fragment="single">KLHSTNPLERVNGEIKRRTEVVGIFPNEAAITRLVGAILLEQNDEWAVQRSRYMTLETIAPIQDDPVIGLPAMAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P757</accession>
    <name>A0A2M9P757_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16970</name>
        <name evidence="1" type="ORF">CNY89_21280</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002014">
        <property type="protein sequence ID" value="PJN93373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001261">
        <property type="protein sequence ID" value="PJN94022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="12610" checksum="4B97749F2C42584D" modified="2018-04-25" version="1" fragment="single">MDKRTSRYIEQWKLSDLQPLTRTFTSDLYKAQSKQGAVVLKVLTDAGAKDEKAAADVLELWGGRGAVQVWHHDEGALLLEYIPGSDLTELVRSGRDDEATGIIADVLRKLHFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P763</accession>
    <name>A0A2M9P763_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002062">
        <property type="protein sequence ID" value="PJN93345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12752" checksum="15D827CDB61DC83E" modified="2018-04-25" version="1" fragment="single">VPGHIRSDNGPEFIAKAVREWIAAVGARTAFIEPGSPWENGYCESFNAKLRDELLNGELFYSLAEGRTVLESWRRHYNTLRPHASLGYKPPAPAAISWPAAPPPAMATKPTMHRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P779</accession>
    <name>A0A2M9P779_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FrmR/RcnR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001940">
        <property type="protein sequence ID" value="PJN93416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003735">
        <property type="entry name" value="Metal_Tscrpt_repr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038390">
        <property type="entry name" value="Metal_Tscrpt_repr_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02583">
        <property type="entry name" value="Trns_repr_metal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="29"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="55"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="128"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16616" checksum="AFAAC3FD27DB996A" modified="2018-04-25" version="1" fragment="single">EEGRPCLELATQMQAVERAIAQAKRTLIEDHLDGTARNGWRRAGGPPSRSGRCSPPPIRRRRSRPPTARRRSCSRPAHRRWRHGRRAAPGGRGSPGAPSSSRAGPGPRRRSSGRRGSLRPRPSGPSRRGSDSARRRGRDRRAGFARRSIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P791</accession>
    <name>A0A2M9P791_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_21055</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001960">
        <property type="protein sequence ID" value="PJN93403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8532" checksum="7F2ADEB2D864E1D1" modified="2018-04-25" version="1" fragment="single">AAEWIGPVDDQRLGLVKVAPYYYYPGWWEPGSTLHALVNKQAYEALPPAYQEVLSVACEAANCDIMARYDALNPMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E2</accession>
    <name>A0A2M9P7E2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001904">
        <property type="protein sequence ID" value="PJN93435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11672" checksum="DC04197C30AE9055" modified="2018-04-25" version="1">MSGKRVVREMTALIAHRGRPGAIVSDNGTEFTSSAVLAFTQAAGLDWRYIAPGKPTQNAFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPIQRSAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T3</accession>
    <name>A0A2M9P7T3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001642">
        <property type="protein sequence ID" value="PJN93614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942214" evidence="1">
        <location>
            <begin position="29"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="2">
        <location>
            <begin position="63"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="20270" checksum="4B285D70F27F28A1" modified="2018-04-25" version="1" fragment="single">MYTLSRRGFLAASAGAIAAAQMPRLAFAQTDSPVTLSAATRTLDINGRAATVFGLAGPGGQGLVLDPGQMFRVDLKNDLDVATIIHWHGQIPPNAQDGVPDMPMPLLAPGETRSYDFEARPGTHWMHSHVPIQEMQLLAAPLIVRTQEDLAADRQEVVMFLHDFSFKSPEEVLAEISGGYGAGHAAAAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W7</accession>
    <name>A0A2M9P7W7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001640">
        <property type="protein sequence ID" value="PJN93615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6213" checksum="F224996200C7E8FD" modified="2018-04-25" version="1" fragment="single">MTNLKSACDAVLSGVTGADARVPGVVAMVTDRDRTIYGADARVPGVVAMVTDRDRTIYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W9</accession>
    <name>A0A2M9P7W9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001613">
        <property type="protein sequence ID" value="PJN93641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9163" checksum="F2CD2FA746ACD812" modified="2018-04-25" version="1">MTRRKFSRAFKIEIVRLVTDRGVAVAQAARDLDAAESVLRRWMRELTATPTTAFPGNGQMGADLAEIAALKKEVARCVRSAPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z2</accession>
    <name>A0A2M9P7Z2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001585">
        <property type="protein sequence ID" value="PJN93664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9476" checksum="6FCADB22C300C3BF" modified="2018-04-25" version="1" fragment="single">MTRWRQRIGPERLETLLADTLAIACDSGAVKPQAMERVTIDTTVQTKAIAYPTDGHLMLRAVERLAALARKQGVVLRQSYARVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P867</accession>
    <name>A0A2M9P867_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001514">
        <property type="protein sequence ID" value="PJN93725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008320">
        <property type="entry name" value="UCP032025"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07370">
        <property type="entry name" value="DUF1489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12208" checksum="E33CCDE315B24CC0" modified="2018-04-25" version="1">MPKLHLLKLCVGADTVEDLLDWQAARRAEAPDRALAHVTRMWPKREAELLDGGSLYWVFKGLILARQPLLGLAPREGADGIRRCALLSPGCGRNARRSCWTAARSTGCSRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P890</accession>
    <name>A0A2M9P890_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Toxic anion resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001508">
        <property type="protein sequence ID" value="PJN93730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008863">
        <property type="entry name" value="Toxic_anion-R_TelA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38432">
        <property type="entry name" value="PTHR38432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05816">
        <property type="entry name" value="TelA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="238" mass="27021" checksum="F7317970E77D33B2" modified="2018-04-25" version="1" fragment="single">LREIVTSIRGFSVQELDPNRERSLWERITGRAQPMAQFVARYEEVQGQIDRITGDLLTHEQTLLKDIKSLDKLYEKTLAFYDELALYIAAGAARLAELDATEIPAREAAVQAAAEDAGVMKAQELRDLRAARDDLERRVHDLKLTRQVTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWETQLAQAVTIHRSREASAVVREANDLTNELLTKNAENLRQANKEIRTEMERGVFDIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q7</accession>
    <name>A0A2M9P8Q7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001341">
        <property type="protein sequence ID" value="PJN93918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13484" checksum="9C7B3766F62AE315" modified="2018-04-25" version="1">MGALMRGQASLAETFVRYGETLAIGSSSEPQRNSGDLLMSAAAGQTAAGIRAAFAPDVLIYDLPPMLVSDDALAFLPHLDCVLLVAGAEKSRLDEVDKCEHELAESGKLLGVALNMCRYMGDEYGYV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X4</accession>
    <name>A0A2M9P8X4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001287">
        <property type="protein sequence ID" value="PJN93988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8713" checksum="45015B6014B7F578" modified="2018-04-25" version="1">MQLPLHLWLPRAVVWLGVLAVLFLMVVWFMAPSPPEELLWNAGGIWAFARVGQFLLMTRGAQAALIWIGGTGQAIERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P991</accession>
    <name>A0A2M9P991_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Branched-chain amino acid transporter AzlC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_16570</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the AzlC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001209">
        <property type="protein sequence ID" value="PJN94092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011606">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34979">
        <property type="entry name" value="PTHR34979"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03591">
        <property type="entry name" value="AzlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="30"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="94"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="122"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="172"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="20454" checksum="E836BF59DBF59910" modified="2018-04-25" version="1">MAEILGMSVLVIAGASQITAVQLMSDQAPTLVVILAGLAVNLRLALYSASLAPHLEGMSLARRMAAAYWLTDQTFGVAISRFERDRGMTPGQRAAYFFGSGVLICLPWYAFTVVGALAGARIPGWLALDFAVPVTFIALFAPALRSLPHLAAAAVSVALALSFAWLPYSLGLMVAAICAMVVGALVETWREGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A1</accession>
    <name>A0A2M9P9A1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16520</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001204">
        <property type="protein sequence ID" value="PJN94102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="112"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="340" mass="37261" checksum="FBA5427162E67F40" modified="2018-04-25" version="1" fragment="single">MPSPLDEVRIGETLDVAALAYRSSSVLEKLRQSARSARSDERREPTFPIGKAGELVGRTTAAIREAENDGRLVAPTRGENNRRLGYTLAQLNDMRGTFGTRPWRAPEDPCAVVAVQNFKGGVGKSTISVHLAQNLAIRGYRVLLIDCDSQASVTTLFGYVPDLDLAEEDTLYPYLREGERTSLDYAIRKTHFDGLDLIPANLRLFQSEYELAARMARGQGALLNRLAQGIASVEDLYDVVVLDPPPALGAISLSVLRAANALVVPVPPTVMDFSSTAAFLAMLSETIEDLKAYDMAPQLAFLRFVASKVDENKSMQRGLLDLMRQIYGNAMIRTPLKDSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D9</accession>
    <name>A0A2M9P9D9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptide-methionine (R)-S-oxide reductase</fullName>
            <ecNumber evidence="2">1.8.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">msrB</name>
        <name evidence="5" type="ORF">CNY89_16175</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(R)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:24164"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12314"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:45764"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.12"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.12" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001163">
        <property type="protein sequence ID" value="PJN94157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033743">
        <property type="term" value="F:peptide-methionine (R)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002579">
        <property type="entry name" value="Met_Sox_Rdtase_MsrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01641">
        <property type="entry name" value="SelR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00357">
        <property type="entry name" value="TIGR00357"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51790">
        <property type="entry name" value="MSRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MsrB" evidence="4">
        <location>
            <begin position="12"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012499"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15137" checksum="33EB9BAF21EFEFB5" modified="2018-04-25" version="1">MTDRTFPVARTEAEWRERLTPEQYAVMRGHGTERPGSCALLHEKRKGTFSCAGCDTPLFGTTDKFESGTGWPSFNDPLPGAVETTTDRSYGMVRTEVHCATCGSHLGHVFDDGPPPTGLRYCINGVALDFEPAVATAPSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H8</accession>
    <name>A0A2M9P9H8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15980</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001139">
        <property type="protein sequence ID" value="PJN94190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13586" checksum="40F12916CB501FF6" modified="2018-04-25" version="1" fragment="single">RPPRRARLRREPAPRRRLGGAIGEEGGYLSPAAQAELNVIAYHAAVAKLCEGFEIDAAKIATASNRVVAEAVKGLEGEALITRHADVLIDLGTSHGIFLAEGSLHLDTFCAEAAEVRADAAFTDLWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I1</accession>
    <name>A0A2M9P9I1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cation transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16040</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001145">
        <property type="protein sequence ID" value="PJN94181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="88"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="238" mass="26338" checksum="9AD270EE5C0CEFD0" modified="2018-04-25" version="1">MGERFNMGLWHLEPLVIAIDGLMLMSIAVYAFVNGLKGLASGGQPVEFGPALIYAGVTLAICASMALFGRRRNRTLQSGLIALDVKAWIMSSSITGALLLAFVLGLLLRGTQGAWLLPYVDPMTLVVVSLAIIPAPLREVWQAIREILLVTPVELRAQVEEVARRVAHEQGFLGHRTYVAEFGRAVQIELYFVVPRGFPPRPLEEWDALRDHVGEAIGGVERHRWLTVLFTTDLEWAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M8</accession>
    <name>A0A2M9P9M8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Leucyl aminopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15740</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001109">
        <property type="protein sequence ID" value="PJN94232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00433">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011356">
        <property type="entry name" value="Leucine_aapep/pepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043472">
        <property type="entry name" value="Macro_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000819">
        <property type="entry name" value="Peptidase_M17_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11963">
        <property type="entry name" value="PTHR11963"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00883">
        <property type="entry name" value="Peptidase_M17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00481">
        <property type="entry name" value="LAMNOPPTDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52949">
        <property type="entry name" value="SSF52949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00631">
        <property type="entry name" value="CYTOSOL_AP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CYTOSOL_AP" evidence="6">
        <location>
            <begin position="223"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS00631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="300" mass="31731" checksum="DA9BDC369409269B" modified="2018-04-25" version="1" fragment="single">AGGVALASEIALGLALKVYDFREFRTPDKDWKAPNAAVTFHVRDAEAVQAAYAPRAAVAEGVFFTRDLVNLPANVLTTLDFAERLEGLRDLGVEVEVLDEEDLERLGMRTLLAVGVGSETPSRVVVMQWKGGGDEAPLALVGKGVVFDTGGISIKPAAGMEEMTCDMGGAGVVAGVMRTIAKRGAKANVVGLVGLVENMPDGRATRPGDIVRSMKGDTVEIINTDAEGRLVLADVLWYAQERFQPRAMIDLATLTGAVVIALGHEMAGVFVNDDKFAGEILAAAQAEDEGAWRMPLIVGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P9</accession>
    <name>A0A2M9P9P9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-hydroxyhepta-2,4-diene-1,7-dioate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001082">
        <property type="protein sequence ID" value="PJN94266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="10868" checksum="FD47425261084E6F" modified="2018-04-25" version="1" fragment="single">MKLLRHGPAGSEKPGLLAEDGTIRDLSAHVADIGGDVLSDAGLAPLRDIDVSSLPEVSADTRLGPCVAGTGKFICIGLNYADHAAESGMAVPPEPVIFMKATSAICG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R4</accession>
    <name>A0A2M9P9R4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FGGY_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001086">
        <property type="protein sequence ID" value="PJN94259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018485">
        <property type="entry name" value="Carb_kinase_FGGY_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018483">
        <property type="entry name" value="Carb_kinase_FGGY_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02782">
        <property type="entry name" value="FGGY_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00445">
        <property type="entry name" value="FGGY_KINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FGGY_C" evidence="1">
        <location>
            <begin position="34"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22016" checksum="82AEFF29EF1C2CBE" modified="2018-04-25" version="1">MTGLVAGTPVARGVYDVVGCSLASGLRETDQLGVVAGTFSINSTLHAAPCLDPRPTLQCPYPVGGLYLATIATPTSASNLEWLCKTMLQAEADKALEAGRSIYEVCSDLVEQALDRESGAMFLPYLFGGPDGAPGALVGLTAGASLADVLRAVFEGITLAHRTDIDFLLSGPDSARPVRATLAGGPSKSDVWSQMFADAIGLPMKSARRSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S2</accession>
    <name>A0A2M9P9S2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Conjugal transfer protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15405</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TrbL/VirB6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001069">
        <property type="protein sequence ID" value="PJN94286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030255">
        <property type="term" value="P:protein secretion by the type IV secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007688">
        <property type="entry name" value="Conjugal_tfr_TrbL/VirB6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04610">
        <property type="entry name" value="TrbL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="35"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="67"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="194"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="28943" checksum="63BD651DE044AC9C" modified="2018-04-25" version="1" fragment="single">MATYIQDTLDLIDATVATYAESVFVDFAGPVTTTIRLGGLVALALLAINVIMQWAPLRVTDFAKWSVRYLIILAVATSWSQFVPFYDMLTNVPTSVGAALLDISGTASLNEALDQMVTSIFDFSDRAADESGFFSVSLLSIVLAIIGALMACVAILVSGIAKVGLAMAVSLAPIFIATLLFRGTSDLFNSWAKFTLGFALIPMVLAGVMGVIVGIGSALIPDVATAGSISEGAGFLIVALAAIFLMSQVPTMVNGLAGTVVATASGVREARQMAGGAAMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U0</accession>
    <name>A0A2M9P9U0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2474 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001059">
        <property type="protein sequence ID" value="PJN94303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018895">
        <property type="entry name" value="DUF2474"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10617">
        <property type="entry name" value="DUF2474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5291" checksum="60DE56B193E61C68" modified="2018-04-25" version="1">MLGRDPGGPPPAPLWRRIGWLAAIWALSVAALAVFAYGFRLLMGLAGLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB7</accession>
    <name>A0A2M9PAB7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MOSC domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000955">
        <property type="protein sequence ID" value="PJN94472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005163">
        <property type="entry name" value="YiiM-like_3-alpha_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03475">
        <property type="entry name" value="3-alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03473">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="28"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="228" mass="24628" checksum="C531023892790452" modified="2018-04-25" version="1">MEWIIDAVRVGAVKPLGPQGVPSGIDKTPVAGPVALIASGLIGDGHGDTRHHGGPEKAVHLYPFDHYAAWRVELPGLADRLVAGAFGENLVVGGITEAQVCIGDVFKIGTALIEVSQGRQPCWRLNLRFGIADMARRVQASGRTGWYFRVIKTGSLAAGSSLTLARRPNPGWSLARVHGLLYRNTLDLEALAEFAALPGLSSSWQTLARRRLERRAVESWNPRVETPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC0</accession>
    <name>A0A2M9PAC0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000944">
        <property type="protein sequence ID" value="PJN94493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="42"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="14144" checksum="C5616FE4333B41D9" modified="2018-04-25" version="1">MDEARALIDAYAAGRDPAELTALFVATLEHVNAARDRVMAGITRYAHKQEALEVRIEELRQEFAALNAAEPKDFDRIDAVEGELDWSTRIFQDRQQSLTYVCETPVILEQRAFALGRAVAERLPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG7</accession>
    <name>A0A2M9PAG7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000926">
        <property type="protein sequence ID" value="PJN94528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005331">
        <property type="entry name" value="Sulfotransferase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03567">
        <property type="entry name" value="Sulfotransfer_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="178" mass="20379" checksum="906A7D8C845E8B2C" modified="2018-04-25" version="1" fragment="single">MISRDWKVVFVHQRKSAGTSVKDLFPPVEGPDRGRFNSGLLDPTWDDPEFAGYYRFTVVRNPWDRFVSAWNYCRSTRGRPILDVIENLPMPDIRDNVLAPRQSLRARLRYALELAKLARDGKATPMGRGHDYRHITRQQWESVVRPDGTLAVDRVVFFEDLAAGLAQVFADIGRPLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH7</accession>
    <name>A0A2M9PAH7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000929">
        <property type="protein sequence ID" value="PJN94522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7446" checksum="FC3B0CAF88AAB97C" modified="2018-04-25" version="1">MDRIVEPLAIIVICLGALWLMAVAHWFGHSAVVAVLLTAFVGGLVAGVIELVRALIDRAAVRPVEGEARE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK0</accession>
    <name>A0A2M9PAK0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Malonyl-CoA synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13845</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000912">
        <property type="protein sequence ID" value="PJN94554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="15"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="2">
        <location>
            <begin position="280"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="371" mass="40540" checksum="5F81645DC9F119F6" modified="2018-04-25" version="1" fragment="single">GSLTEGGGARAADFETVARSQDDLAALLYTSGTTGRSKGAMLSHGNLASNAAALRETWRYTAEDVLIHALPIFHTHGLFVATNITLLSGASMLFLPRFDPDKVFALMPRASVLMGVPTFYVRLLEDDRLTPEATKHMRLFVSGSAPLLAETHREWQARTGHAILERYGMTETNMNASNPYDGARVAGTVGLPLPEVEIVVTDPETGAELAQGEIGMIEVRGPNVFKGYWRMPEKTAAELRDNGFFITGDLGRIDDQGYLHIVGRGKDLIITGGYNVYPKEVEAEIDEIPGVVESAVVGLPHRDFGEGVTAVVVTNGKTEITETDVIKALEGRLARFKLPKRVLFAAELPRNTMGKVQKNLLRQAYDDLYRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK6</accession>
    <name>A0A2M9PAK6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000913">
        <property type="protein sequence ID" value="PJN94549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9183" checksum="6F0E3349D8ED5486" modified="2018-04-25" version="1">MGQVHHGCATTTAAVRRAIQHSQESLRALAKLPDRGQVDPPLNELAGQPDRHVSEYVIIGTLASYAWAIAVGYAARGALQALGALPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ8</accession>
    <name>A0A2M9PAQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000868">
        <property type="protein sequence ID" value="PJN94624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8418" checksum="2D7ABE88CBC38914" modified="2018-04-25" version="1">MPQAIAEAGAASLATIVIAGNASSWGVADGVNGLCVPPADPRAVASAILRLVHDPVRRGRLGRRLNTEVAARCSTDVGSAWGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV3</accession>
    <name>A0A2M9PAV3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">QacE family quaternary ammonium compound efflux SMR transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13260</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the drug/metabolite transporter (DMT) superfamily. Small multidrug resistance (SMR) (TC 2.A.7.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000850">
        <property type="protein sequence ID" value="PJN94649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042221">
        <property type="term" value="P:response to chemical"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000390">
        <property type="entry name" value="Small_drug/metabolite_transptr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045324">
        <property type="entry name" value="Small_multidrug_res"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30561">
        <property type="entry name" value="PTHR30561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00893">
        <property type="entry name" value="Multi_Drug_Res"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="33"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11143" checksum="F7CA9ABEE471477F" modified="2018-04-25" version="1">MAWVYLVAAGILEIVWAYAMKQSHGFTRLVPTSIMLVTMIGSFGLLSISMRTLPLGVAYTIWTGIGAVGAFVVGVTILGETATPTRILAALLIVSGLVLMKLSTSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV7</accession>
    <name>A0A2M9PAV7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Putative fluoride ion transporter CrcB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10 11" type="primary">crcB</name>
        <name evidence="11" type="ORF">CNY89_13115</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 10">Important for reducing fluoride concentration in the cell, thus reducing its toxicity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the CrcB (TC 9.B.71) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000838">
        <property type="protein sequence ID" value="PJN94673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1903425">
        <property type="term" value="F:fluoride transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00454">
        <property type="entry name" value="CrcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003691">
        <property type="entry name" value="CrcB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28259">
        <property type="entry name" value="PTHR28259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02537">
        <property type="entry name" value="CRCB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00494">
        <property type="entry name" value="crcB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="67"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="95"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="12694" checksum="AD7D0CE71B7625EF" modified="2018-04-25" version="1">MPFLFQIALGGALGALARVGVTTLLTRALGTGFPWGTATVNVLGSFLMGFALVLVFRNEEMVRHAPLLGPGLLGGFTTFSAFALDALVLAERGKFVAAGAYVLGSVAVSLVAVALGAWVAKGLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB02</accession>
    <name>A0A2M9PB02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000821">
        <property type="protein sequence ID" value="PJN94702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="21405" checksum="8360086210E0709A" modified="2018-04-25" version="1">MQGMSERQYAAHVGLSRGAIQKAKAAERLVLYPDGSINAAASDARRAETTDPSKTRKPPAPKLKPVPEAAVAAVGDTLREQGLAVPAVGGGTTFLQAKTANEVLKAQERRIRLQKLKGELIERARALALVFRLAREERDAWVNWPARAAALMAAELSASCADATGQQITVEPAAMQKVLEKHVRAHLDELAEVRPDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK3</accession>
    <name>A0A2M9PBK3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminopyrimidine aminohydrolase</fullName>
            <ecNumber evidence="1">3.5.99.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_11625</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>4-amino-5-aminomethyl-2-methylpyrimidine + H2O = 4-amino-5-hydroxymethyl-2-methylpyrimidine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:31799"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:63416"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17509"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:18385"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TenA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.99.2" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000701">
        <property type="protein sequence ID" value="PJN94910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050334">
        <property type="term" value="F:thiaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026285">
        <property type="entry name" value="TenA_E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004305">
        <property type="entry name" value="Thiaminase-2/PQQC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03070">
        <property type="entry name" value="TENA_THI-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003170">
        <property type="entry name" value="Pet18p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="SSF48613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0784">Thiamine biosynthesis</keyword>
    <feature type="domain" description="TENA_THI-4" evidence="4">
        <location>
            <begin position="13"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="2">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR003170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR003170-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR003170-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="23340" checksum="DBF597586F0C99C8" modified="2018-04-25" version="1">MTASFTETLRQANAPLWAEAVGHRFVAELLEGSLAPEVMARYLIQDHRFLDAFLTLLGAAMASADTFRARLILGRFAGLVSGEENTYFLRAFAALGVTEAEREDPPDAAPTAGFKALMQEAAATRSYAAALSVLTVAESLYLDWASRAPDPGPESFVHAEWITLHDNPGFRAFVSFLTEELDRVGPTEPDLCRDFFARAVVLEKAFFDAAYQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ9</accession>
    <name>A0A2M9PBQ9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000666">
        <property type="protein sequence ID" value="PJN94977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13673">
        <property type="entry name" value="Acetyltransf_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16685" checksum="1234628577E2396D" modified="2018-04-25" version="1">MSADCPPVWWFLALYQAVGADYEWTDQQTRPPAEVEAFLSHQEVEFFTLMRSGWPHGFFILDGRTRGVVDLSYFGLVPEAIGRGLGTFLIQTAVHMAWDRPGVARMTVNTNSLDHPRALPLYQKAGFSPVSRETRSRVLTRDRTLNGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX5</accession>
    <name>A0A2M9PBX5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">4-hydroxythreonine-4-phosphate dehydrogenase PdxA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">pdxA</name>
        <name evidence="3" type="ORF">CNY89_11065</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000653">
        <property type="protein sequence ID" value="PJN95002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005255">
        <property type="entry name" value="PdxA_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30004">
        <property type="entry name" value="PTHR30004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04166">
        <property type="entry name" value="PdxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00557">
        <property type="entry name" value="pdxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="260" mass="27545" checksum="F958737F1F080AD5" modified="2018-04-25" version="1" fragment="single">IDVPVEGLPDRFGVLSPRCGEAAFQYIRKAVELATAGEASGIVTAPINKEALNDAGHHYDGHTGLLAHLTGSRASWMLLASERLNVVHVSTHVSLKTAIARATPERVLETIRTGHRHFQRMGVAHPRIAVAGINPHCGENGLFGTEDDAQIAPAVAMARAEGIDVSGPISADTVYHRAYNGAFDLVVAQYHDQGHIPIKLVAFDTAVNVSLGMPIDRASVDHGTAFDIAGTGKANHENMLCALAYAGRLASSRRKAAVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ5</accession>
    <name>A0A2M9PBZ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 15">Protoporphyrinogen IX oxidase</fullName>
            <ecNumber evidence="15">1.3.99.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">CNY89_10870</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="15">Catalyzes the oxidation of protoporphyrinogen IX to protoporphyrin IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>3 A + protoporphyrinogen IX = 3 AH2 + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:62000"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="15">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="15">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 15">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the HemJ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.99.-" evidence="15"/>
    <dbReference type="EMBL" id="PHNO01000637">
        <property type="protein sequence ID" value="PJN95039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005265">
        <property type="entry name" value="HemJ-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40255">
        <property type="entry name" value="PTHR40255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03653">
        <property type="entry name" value="UPF0093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004638">
        <property type="entry name" value="UCP004638"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 15" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 15" id="KW-0349">Heme</keyword>
    <keyword evidence="13 15" id="KW-0408">Iron</keyword>
    <keyword evidence="14 15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="10 15" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="47"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="77"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="112"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00006501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00017504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR004638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN95039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17548" checksum="2591223103E2EFC1" modified="2018-04-25" version="1">MIWVKTLHMAAIALWTAGLLVLPGLYLRRANVAAGPPLHRLQRMTRFLYVAILSPAAFVAVGSGVGLVFLARTFEPWFALKLALVGGLVALHVLTGLVILKIFEDGRSYPRWRFLAVTTLTGALAVAVLTVVLAKPELPDLASVALFQPGALPGLIAPFNPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC66</accession>
    <name>A0A2M9PC66_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1508 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000583">
        <property type="protein sequence ID" value="PJN95145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010879">
        <property type="entry name" value="DUF1508"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036913">
        <property type="entry name" value="YegP-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07411">
        <property type="entry name" value="DUF1508"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160113">
        <property type="entry name" value="SSF160113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1508" evidence="1">
        <location>
            <begin position="8"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6131" checksum="FF39E47EC55380B3" modified="2018-04-25" version="1">MRFELYKDAAGQWRWRLKSANGNIIATSSEGYVGKSDARRGIEIVQSSAAASVVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE1</accession>
    <name>A0A2M9PCE1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Hemin receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09970</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the globin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000565">
        <property type="protein sequence ID" value="PJN95188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005344">
        <property type="term" value="F:oxygen carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000971">
        <property type="entry name" value="Globin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00042">
        <property type="entry name" value="Globin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01033">
        <property type="entry name" value="GLOBIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0561">Oxygen transport</keyword>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="GLOBIN" evidence="3">
        <location>
            <begin position="3"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15759" checksum="1417119CE7C6E738" modified="2018-04-25" version="1">MRLSEREADLIRASFRAIAADAPNAAGAFYGHLFEIAPHTRRMFVKDVNRQGAKLVATLGFVVAEMDAWVNVAPLVEELALRHLAYGVLPDDYRLVGLALQAMLSATLGSACTSETSAAWARLYDALQSQMTAAAYDLPALHHSSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG1</accession>
    <name>A0A2M9PCG1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000542">
        <property type="protein sequence ID" value="PJN95230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015128">
        <property type="term" value="F:gluconate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003474">
        <property type="entry name" value="Glcn_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30354">
        <property type="entry name" value="PTHR30354"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02447">
        <property type="entry name" value="GntP_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="140"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="21821" checksum="9789839BB5CC1729" modified="2018-04-25" version="1" fragment="single">MGLIGILLSLFLLMYLAYRGINVLVLAPILALMAVLLAGGMPLLATYTQVFMKALGNYLTTYFPLFLLGAIFGKVMADNGSARAISEWIVAKLGPEHAIMAIVLACGILTYGGVSLFVVAFAVYPISVSLFRRADVPKRLIPGAIALGSFTFTMTALPGTPAIQNAIPMPFFGTTPFAAPILGTLAGLIMFGGGVWWLRLRPRPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM6</accession>
    <name>A0A2M9PCM6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sulfate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09360</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the prokaryotic sulfate-binding protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000514">
        <property type="protein sequence ID" value="PJN95291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901681">
        <property type="term" value="F:sulfur compound binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902358">
        <property type="term" value="P:sulfate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01005">
        <property type="entry name" value="PBP2_CysP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034408">
        <property type="entry name" value="Sulphate/thiosulphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005669">
        <property type="entry name" value="Thiosulph/SO4-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30368">
        <property type="entry name" value="PTHR30368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00971">
        <property type="entry name" value="3a0106s03"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00757">
        <property type="entry name" value="PROK_SULFATE_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014883582" evidence="6">
        <location>
            <begin position="25"/>
            <end position="334"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="334" mass="36154" checksum="3F148F83FBC5638B" modified="2018-04-25" version="1">MKPAFLAAALALGLAPGFALPAVAQDSILNVSYDVARELFGEVNPAFAKAWKAETGRDVTIDQSHGGSSKQARSILEGLPADVVTFNQVTDIDVLAEGGLVDPDWRDAFPNEASPYYSLPAFLVREGNPKGIEDWDDLVRDDVKVVFPNPKTSGNARYTYLAAYAYALDQSAGDPEKAKAFVKKLFANVPVFDTGGRAATTTFAEKEIGDVLVTFEAETGGIAREYPDRGFVRVTPSLSLYADFPVAVVSEVAERKGTEEVSKAYLDFLYAPEGQRILARNFYRVHDAAAQAEFAGQFPEVRLVTVDEVFGGWEAIGKDHLAEGGILDTLFVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM9</accession>
    <name>A0A2M9PCM9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000508">
        <property type="protein sequence ID" value="PJN95306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6168" checksum="01E5478DADC13537" modified="2018-04-25" version="1">MPPPEFRRGGDGERVAAAIVAIVLALALLLLLVLAFAPAWGAAAELADCAAVCVETHLEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP2</accession>
    <name>A0A2M9PCP2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2892 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000521">
        <property type="protein sequence ID" value="PJN95272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021309">
        <property type="entry name" value="DUF2892"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11127">
        <property type="entry name" value="DUF2892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7553" checksum="075CE64E46875F42" modified="2018-04-25" version="1">MTRNIGAADRMIRLVAGIVLILLPLLTGFAAATPWLWWGALVVGGTMLATAVMRSCPLYTLLGVSTCPLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR7</accession>
    <name>A0A2M9PCR7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09120</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000498">
        <property type="protein sequence ID" value="PJN95330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014767401" evidence="2">
        <location>
            <begin position="25"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="36"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="15923" checksum="0A8D688C2EC75922" modified="2018-04-25" version="1" fragment="single">MTTRRIALGLMAAALLAAAAPVSAQTPEEIKAKGALSVGMLVDFPPFGIMNAQNQPDGYDADVAKLLGEDLGVPVTIVPVTGPNRIPYLLSGQVDVLVASLGITKERAERVDFSDPYAGIRIGVIGQSELDLSTPEKLAGHKVGVTRASTQDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS6</accession>
    <name>A0A2M9PCS6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dienelactone hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000489">
        <property type="protein sequence ID" value="PJN95349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002925">
        <property type="entry name" value="Dienelactn_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01738">
        <property type="entry name" value="DLH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DLH" evidence="1">
        <location>
            <begin position="4"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13441" checksum="4B0BB986520A7D20" modified="2018-04-25" version="1" fragment="single">RSHSQAEKLVVAGYCFGGGATLEAARNGVTGAEGYVTFHGLVATPEGQSWPGDAAPLLVLHGGADKTPDMAGIAAFSQELEAAGVPYEIEVYSGAPHAFTVFGSDNYREKADAESWAAFERFLAQTFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS8</accession>
    <name>A0A2M9PCS8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MucR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000488">
        <property type="protein sequence ID" value="PJN95351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="131"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17757" checksum="F6FDDFF6C5C5AB77" modified="2018-04-25" version="1">MDTEASLTRHEFLTLTSEIVSAYASNASVEMAAVPDMIGSVLAKLRELAAGEEAVPEARTPAVPIRRSVTNDHIVCLEDGKKLKMLKRHLMVAHGLTPDDYRAKWGLKHDYPMIAPVYEAKRQEIAKKIGLGRKPRIIDPAPAPDPVPSTPPKKRSRSKSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT6</accession>
    <name>A0A2M9PCT6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000486">
        <property type="protein sequence ID" value="PJN95359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10692" checksum="827249BF8EBF9C62" modified="2018-04-25" version="1" fragment="single">MGRGSTAAPQSRDAGTRLAQSRLSVLELAKELGNVAEACRQRGLDRTSFYEWKRRFQTQGFERLKDLPPIHKSHPQTTPPEVVERIEALALEHPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU3</accession>
    <name>A0A2M9PCU3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NAD-dependent dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000495">
        <property type="protein sequence ID" value="PJN95338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="5"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15885" checksum="D0A0ADEAF19168BB" modified="2018-04-25" version="1" fragment="single">MWRQETGRRIHFHLIDLARDYEILKAWLLEHRPEAIVHFAEQRAAPYSMKSDRHKNYTVNNNVTGTHNLLNALVETGVDAHLVHLGTMGVYGYSTVGAAIPEGYLPVEVETLSGDKATTEILYPANPGSIYHMTKCVDQLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW0</accession>
    <name>A0A2M9PCW0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage tail assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000483">
        <property type="protein sequence ID" value="PJN95363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019289">
        <property type="entry name" value="Phage_tail_Gp41_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10109">
        <property type="entry name" value="Phage_TAC_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="10649" checksum="7B2C65C7ADA24BF7" modified="2018-04-25" version="1">MTSLSAPVTLSTPIVRTGAAEPFAAVAIRKPTAGALRGLMLTKVITMDVSTMLTLLPRVTEPALLPDETAALDPADLLALSTAVVGFFMTPAQAAEVEAAQASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY9</accession>
    <name>A0A2M9PCY9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000460">
        <property type="protein sequence ID" value="PJN95415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="64"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10188" checksum="DC36002B29C9092A" modified="2018-04-25" version="1">MAQKPITKTQLVAAIAEAAGLDKTAASRALDALTEIVTREVAAGGAVTLPGLGKFACRDWPERKVRNPSTGEKMTKPADRSAKVTISRQLKDVLND</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD13</accession>
    <name>A0A2M9PD13_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">SCO family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SCO1/2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000454">
        <property type="protein sequence ID" value="PJN95431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02968">
        <property type="entry name" value="SCO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003782">
        <property type="entry name" value="SCO1/SenC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12151">
        <property type="entry name" value="PTHR12151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02630">
        <property type="entry name" value="SCO1-SenC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014961538" evidence="2">
        <location>
            <begin position="21"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="20917" checksum="0B076595EBA2F932" modified="2018-04-25" version="1">MTRHLRLGLLAGVLAATCMAAWRTPQAESVTDRLGRGDYVLAATDGGTFTEEALKGRPSAVFFGFTRCPDICPTTLGDIAAWRDVLGPEADEIRFWFVTVDPERDTIDLMRKYVSWTPGVTGVAGTPEETAKAVAAFRVYVNKAPFGDGDYTIDHSALVMLFGRDGRFADAIRYQEPPQDAVAKLRLLLTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT5</accession>
    <name>A0A2M9PDT5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyprenyl synthetase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06955</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the FPP/GGPP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000342">
        <property type="protein sequence ID" value="PJN95696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008299">
        <property type="term" value="P:isoprenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00685">
        <property type="entry name" value="Trans_IPPS_HT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008949">
        <property type="entry name" value="Isoprenoid_synthase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000092">
        <property type="entry name" value="Polyprenyl_synt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033749">
        <property type="entry name" value="Polyprenyl_synt_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00348">
        <property type="entry name" value="polyprenyl_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48576">
        <property type="entry name" value="SSF48576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00723">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00444">
        <property type="entry name" value="POLYPRENYL_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU004466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="33823" checksum="E924DF5C693F8C19" modified="2018-04-25" version="1">MNEPARILPPFERLQAALSEDMAGVNALIRARMASEHAPRIPEVTAHLVEAGGKRLRPLLTLAAARLCGYQGEDHLKLAATVEFIHTATLLHDDVVDESARRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDILANASAVIAEGEVLQLTAAASLATSEAVYMQVIRGKTAALFAAATEVGGVIAGAPEDQVGALRDYGDALGVAFQITDDLLDYGGTSLGLGKDVGDDFRERKMSLPVIRAVAAADAAEREFWTRVIAKGDQRDGDFETARGLMLRHGALEGVRETIRSSASRRLARNRRAIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB8</accession>
    <name>A0A2M9PEB8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(R)-hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000280">
        <property type="protein sequence ID" value="PJN95862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="21"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="15787" checksum="B457321B675C5380" modified="2018-04-25" version="1">MNDLNGYDIEDLTVGMTATFAKTITEADIILFAGASGDNNAIHINDEFARATSFGGRIAHGFLTASVISAAVANRLPGPGAVYISQQMNFRAPVRPGDTVHASVVVREVNTERARVTLETVCRVAGTVVIDGEAVVRTTSRARRAKAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC3</accession>
    <name>A0A2M9PEC3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000264">
        <property type="protein sequence ID" value="PJN95900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7354" checksum="F67013E8E28583F0" modified="2018-04-25" version="1">MLEINEISRGLVGKYVDVCEFADGRVQVRALGVVLPHTVFDKNQRVIPARSDRNSCAAAPAPRKCES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE4</accession>
    <name>A0A2M9PEE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Cation acetate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_06000</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000280">
        <property type="protein sequence ID" value="PJN95864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018212">
        <property type="entry name" value="Na/solute_symporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00474">
        <property type="entry name" value="SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00456">
        <property type="entry name" value="NA_SOLUT_SYMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <keyword evidence="7" id="KW-0915">Sodium</keyword>
    <keyword evidence="7" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4" id="KW-0769">Symport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014683379" evidence="10">
        <location>
            <begin position="18"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="28"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="179"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="212"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="260"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="296"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="313" mass="33544" checksum="D5BFC06434D6992C" modified="2018-04-25" version="1" fragment="single">MLALGALLAALPTTLLAADPIAGGVKQPLNVIAIVIFLIFVAATLVITWWAAKRSKTASDFYTAGGGISGFQNGLAVAGDYMSAATLLGITSLVYMRGYDGFLYAIAFFMGWPALLFLMAERLRNLGRFTFADIVSYRLDPRTMRIMAATGGLIVVFFYLIVQMVGAGELIQLLFGLDYNVAVVVVGVLMTVYVAFGGMIATTWVQIIKASLLLAGGTFLAVLTLSQFGFSFERLATAAVAVHKEHDTIMGPSVLLKDPIQAISFALGACFGLLGLPHILMRFFTVPDAVEARKSVVYASGFIGYFFLLICVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ6</accession>
    <name>A0A2M9PEJ6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Error-prone DNA polymerase</fullName>
            <ecNumber evidence="2">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">dnaE2</name>
        <name evidence="13" type="ORF">CNY89_05515</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA polymerase type-C family. DnaE2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000250">
        <property type="protein sequence ID" value="PJN95942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011708">
        <property type="entry name" value="DNA_pol3_alpha_NTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040982">
        <property type="entry name" value="DNA_pol3_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023073">
        <property type="entry name" value="DNA_pol_error_prone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294:SF4">
        <property type="entry name" value="PTHR32294:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07733">
        <property type="entry name" value="DNA_pol3_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17657">
        <property type="entry name" value="DNA_pol3_finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00594">
        <property type="entry name" value="polc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="6" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="5 13" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_pol3_alpha" evidence="11">
        <location>
            <begin position="172"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_pol3_finger" evidence="12">
        <location>
            <begin position="430"/>
            <end position="595"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF07733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF17657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="700" mass="78158" checksum="6E69A09F9671811C" modified="2018-04-25" version="1" fragment="single">KAACRLDWSDLAAYGEGLIATLVPDVADEDCALWLRRLREGFGTRGYLALTLRRRPNDELRLHELSELAAQAGVPTVATNDVLFHVPGRRILQDVVSCIRHGVAIDDLGFRRERHADRHLKPPREMARLFRRHPEALARSLEIVERCRFSLDELAYQYPRETTTPGLTPQQALERLTWEGAATRYPEGLPAKVASALRHELGLIERLGYAPYFLTVNAIVRFARSQDILCQGRGSAANSAVCYVLGVTSIDPDLHDLLFERFVSEERREPPDIDVDFEHDRRETVLQWVFDTYGRDHAALCATVIRYRARGALRDVGRALGLPEDLLRSLSAQISGWSQEGFDLEQAAGDLNLNLGDRRLRLALDLARQLIGTPRHLSQHPGGFVLTDDRLDELVPIEPAAMADRQVIEWDKDDIDTLRFMKVDCLALGMLSCLKRGFDLLREHKGVDFDLATIPPKDGDTYAMIRQADTIGVFQIESRAQMAMLPRLKPENFYDLVIQVAIVRPGPIQGDMVHPYLRRREEKEAVDYPTPELEKALSKTLGVPLFQEQAMRVAIDCAGFTPGEADQLRRAMATFKASGGVSPFREKLVGGMVARGYAPAFAERTFAQLEGFGSYGFPESHAASFALIAYASSWLKRHHPDVFCAALLNAQPMGFYAPAQIVRDACGHGVEVRPVCVNASRWDCTLEPTQTPGRAACSTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK8</accession>
    <name>A0A2M9PEK8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000245">
        <property type="protein sequence ID" value="PJN95958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010064">
        <property type="entry name" value="HK97-gp10_tail"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04883">
        <property type="entry name" value="HK97-gp10_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01725">
        <property type="entry name" value="phge_HK97_gp10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="14836" checksum="28D3DA9E3867A0A6" modified="2018-04-25" version="1">MAQDGGLARFQARMKALPEAVREAVKPALVKGAEEIAALQRSAAEASRDTGDLIDSIAVTGPGGTTPPYSQPGGSKTVGELEAVVTAGNSKVRYAHLVEHGTKKAEAQPFFWPGFRLGRKRATARIKRAISKAVKDSRGPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER0</accession>
    <name>A0A2M9PER0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000225">
        <property type="protein sequence ID" value="PJN96016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="10369" checksum="3FB6ED77973E678B" modified="2018-04-25" version="1">MHEGRDLDELSHCLARFYPGEDRLFSAICWERRWRSPVWFALRLVVDHVFHQRTGELGHCREAWRRERAERAEARELPERLRAAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW5</accession>
    <name>A0A2M9PEW5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000212">
        <property type="protein sequence ID" value="PJN96052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="13"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10335" checksum="D30EE7E7CBF918D5" modified="2018-04-25" version="1">MSFGAILGQMMQQGLSSRGSGGGRLQDVLKNLGAGQPGQGGGANDLFGQLQTMLAGAQSQDGIATQAKDFLTKGQVGGVTCQLRVTDDLDGLVVQMPLKQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF59</accession>
    <name>A0A2M9PF59_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Efflux pump membrane transporter</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_04030</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 4">Cell inner membrane</location>
            <topology evidence="2 4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000171">
        <property type="protein sequence ID" value="PJN96187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042908">
        <property type="term" value="P:xenobiotic transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004764">
        <property type="entry name" value="HAE1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000731">
        <property type="entry name" value="SSD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00915">
        <property type="entry name" value="2A0602"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50156">
        <property type="entry name" value="SSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="335"/>
            <end position="353"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="360"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="385"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="430"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="462"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="525"/>
            <end position="543"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="861"/>
            <end position="879"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="886"/>
            <end position="906"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="912"/>
            <end position="933"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="960"/>
            <end position="980"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="992"/>
            <end position="1015"/>
        </location>
    </feature>
    <feature type="domain" description="SSD" evidence="5">
        <location>
            <begin position="360"/>
            <end position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010942"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU364070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="1029" mass="107900" checksum="95263297ECBAC8D0" modified="2018-04-25" version="1">MAAVISIVITIAGLVSLTRLPIAQFPDIVPPQVSVTASYPGASAEAVETAVAQPIEDAVIGVDDMIYMKSTSGSDGSYALSVSFAVGTDPDIAAVNVQNRLALAEPLLPEDVRRNGVSVKKQSSALLMAASFYSESGDHDALFLSNYVRLNILDALKRVPGVGDVTMFGPRDFAMRVELDVDRLTSLGLTPADVIAAIRAQNVQAAIGRLGAQPMAEDPTFQFTLTTVGRLSDPSEFEAIVIRAAPDGSFIRLRDVGRASLGAANYDTSARFDGKDSAMLGVYLAPGGNALATAEGVRTVLGAAAARFPAGVAYAVAYDTSEFVVESVHEVQKTLIEAFLLVALVVFLFLGSLRAMFVPILAVPVALIGVFAAMLALGFSLNTVSLLALVLAIGIVVDDAIVVVENVERVMREHPDLTPAEAAAKAMGEITGAIVAITLVLLSVFVPVAFIPGISGQLFQQFAVVVSVSMVLSAVNALTLSPALCAIFLKPHQGPPRGALGWVSRRIDGARDGYARIAAVIARRALIGVLILIGAGVLTGWLARTVPSGFLPSEDQGAFFMEVRLPEGASANRTDAVLRRVEAQVLQIPGVESVMSIGGYSFYDGLAKSNAGAIIATLKPFSERTEPGQDAFAAIATANRLGYAVREAVIFAYNLPPIIGLGTGSGFEYQLLDREGRPPAELAATAKGLVVAANQDPRLAQVFTTYAADSPRVFLDVDRDRLQSLGVSVSDLFSALQGVLGSVYVNDFNIFGRAWRVTLQGRESDRFAIPDIGRIHVRSASGDMVPVAAVVQARMEVGPASIIRFNNARSVTINGGPAPGVSSGTALAAMSEVSAASLPPGYDYEWSGTALQELQAAGQTTAILGLSLLFAYLFLVGLYESWTIPIPVLLSVTIGVAGAFGALLVAGLPFDIYAQIGLVVLIALAAKNAILIVEFAKDRREQGAPILDAAVEGARTRFRAVMMTSVAFIAGLIPLVWATGAAELSRRAVGTAVAGGMLAAAALGIFVIPALFVVFETMREKAGKIFRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF66</accession>
    <name>A0A2M9PF66_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">ATP synthase subunit c</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">ATP synthase F(0) sector subunit c</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">F-type ATPase subunit c</fullName>
            <shortName evidence="10">F-ATPase subunit c</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Lipid-binding protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">atpE</name>
        <name evidence="12" type="ORF">CNY89_04090</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="function">
        <text evidence="10">Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the ATPase C chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000174">
        <property type="protein sequence ID" value="PJN96178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008289">
        <property type="term" value="F:lipid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01396">
        <property type="entry name" value="ATP_synth_c_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000454">
        <property type="entry name" value="ATP_synth_F0_csu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038662">
        <property type="entry name" value="ATP_synth_F0_csu_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002379">
        <property type="entry name" value="ATPase_proteolipid_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035921">
        <property type="entry name" value="F/V-ATP_Csub_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10031">
        <property type="entry name" value="PTHR10031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00137">
        <property type="entry name" value="ATP-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00124">
        <property type="entry name" value="ATPASEC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81333">
        <property type="entry name" value="SSF81333"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 10" id="KW-0138">CF(0)</keyword>
    <keyword evidence="5 10" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 10" id="KW-0446">Lipid-binding</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="53"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_C" evidence="11">
        <location>
            <begin position="12"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="site" description="Reversibly protonated during proton transport" evidence="10">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="7657" checksum="F672BCF76C1F9358" modified="2018-04-25" version="1">MEGNIAEMGQFIGAGLACVGMGGAGIGVGHVAGNFLAGALRNPAAAGEQTATLFIGIAFAEALGIFSFLVALLLMFAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA1</accession>
    <name>A0A2M9PFA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thioesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000161">
        <property type="protein sequence ID" value="PJN96230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003736">
        <property type="entry name" value="PAAI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00369">
        <property type="entry name" value="unchar_dom_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="1">
        <location>
            <begin position="49"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15310" checksum="AC22BEAF5FE4BDC7" modified="2018-04-25" version="1">MQTVMTIPDLAAFLDAVFPQVRGRFEILELAPHAAEVRMTARDEDLRPGGTVSGPAMFALADVAFYIVTLAMIGPEPLTVTTSATIDFLRKPAPGRMVASARILKLGRSLSVGDVLLRSEGMEAPVARAGFTYSIPPVRASRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF3</accession>
    <name>A0A2M9PFF3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Peptidase M3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_03615</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase M3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000150">
        <property type="protein sequence ID" value="PJN96259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06456">
        <property type="entry name" value="M3A_DCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034005">
        <property type="entry name" value="M3A_DCP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024077">
        <property type="entry name" value="Neurolysin/TOP_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045090">
        <property type="entry name" value="Pept_M3A_M3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001567">
        <property type="entry name" value="Pept_M3A_M3B_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43660">
        <property type="entry name" value="PTHR43660"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01432">
        <property type="entry name" value="Peptidase_M3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 7" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="2 7" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M3" evidence="8">
        <location>
            <begin position="226"/>
            <end position="670"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="674" mass="74098" checksum="060981C170D806BE" modified="2018-04-25" version="1">MTNPLLRDWDAPFGMPPLGGIDDADFAPAFEAALAEARANVDRIAEDPEAPTFANTIEALERAEKALDRVCAVFFNLASAHTNDAIEALQRELSPRLAAHSSATMMNAGLFARVDALMNRRADLGLTAEQDRVLFLYHRMFVRAGARLEGANRDRLAAILQRLAALGTKFSQNVRADEKAWTMRVEGDDLEGLPGFLVEAMAEAAAERGMEGHVVTLSRSLITPFLQFSPRRDLRETAFKAWVARGMTGGETDNRGVVAETLALRSERARLLGYADFAAFKLDTEMAKSADAVRDLLMAVWGPARARAEADAEKLAGLMRAEGVNDALAPWDWRRYAAIRRREEHDLDEAALKPYFQLDRMLEAAFDVAGRLFGLTFRPVEAGLYHGDARAWEVRQGERHMGVFIGDYFARPSKKSGAWCSTFRGQSKMDGEERPIVLNVCNFAKAPEGKPTLLTFDDARTLFHEMGHGLHQLLSDVTYGFVSGTSVARDFVELPSQLYEHWLETPEVLGKHARHAETGEAMPAALLQRLIAARNFDQGFGTVEYVASALVDLDLHTGQPAADPMAAQAATLARLGMPEAMVMRHAVPHFDHVFAGDGYSAAYYSYMWSEVMDADAFAAFRETGDVFDAGVAERLRTHILSAGGSRDAAELYVAFRGRLPGVEALLEQRGLAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN2</accession>
    <name>A0A2M9PFN2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03040</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000120">
        <property type="protein sequence ID" value="PJN96356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="102"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="168"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="279"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="98"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="311" mass="33716" checksum="BA4B0921E3D4D389" modified="2018-04-25" version="1">MSDAPASARVPPAPDAIDAPERSLWSDVWRQFRRHPGAMIGVTLFLVIVAAVALGPTLWPIDPSYIDVRARNAAPSLVHPMGTDNIGRDIFAQVLQGGRVSLAVGMTAMLLSVFLGTLIGVLAGYFRRLDGLLMRLTDLFLALPILPLLLVILMLFRDTLRAAFGPETGIFLLIVFIIGVTSWMQTARIVRGDVLALKEREFVLAAQSIGTPSRRIILRHILPNVMSPIMVSATLGVASAIITESALSFLGLGFPSDFPTWGRLLFDGANFMTISPARVIWPGLAISLTVLSVNYIGDGLRDALDPRIRGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG39</accession>
    <name>A0A2M9PG39_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000097">
        <property type="protein sequence ID" value="PJN96444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10442" checksum="84A4562C59E28256" modified="2018-04-25" version="1" fragment="single">AGVLRASIAAPRPGFAWNLADDEPAPPQDVIAEAAELLGLPLPPEIPFEEADLSPMARSFYGESKRVSNRRIREILGVSLRYPSYREGLRGILAAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG45</accession>
    <name>A0A2M9PG45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000075">
        <property type="protein sequence ID" value="PJN96520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014832088" evidence="1">
        <location>
            <begin position="31"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10848" checksum="1C62276342CAEAFD" modified="2018-04-25" version="1">MCGDRTMKTGLLAASLVLLAGLTAPDLARAEMMTACQPEIAQYCGGVSRGRGRIAACLVGRMDRLSAACKPEVQATMKSPFIPGDMRAIFQPGNIRPLRAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG48</accession>
    <name>A0A2M9PG48_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidoglycan-binding protein LysM</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02445</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000093">
        <property type="protein sequence ID" value="PJN96454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00118">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007055">
        <property type="entry name" value="BON_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018392">
        <property type="entry name" value="LysM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036779">
        <property type="entry name" value="LysM_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04972">
        <property type="entry name" value="BON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01476">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00257">
        <property type="entry name" value="LysM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54106">
        <property type="entry name" value="SSF54106"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50914">
        <property type="entry name" value="BON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51782">
        <property type="entry name" value="LYSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="BON" evidence="1">
        <location>
            <begin position="21"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="LysM" evidence="2">
        <location>
            <begin position="95"/>
            <end position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15346" checksum="45388A7345C01345" modified="2018-04-25" version="1">MGLWNFVKSAGKALGIGDAKAEEAPTPEALAKEIEALGLDAKGVDIKVEGDKVVLSGAAVSKEVKEKLIVATGNVTGVSAVEESVSAPDGDADPVFYTVKKGDTLWKISEETLGSGARYKEIFEANRPMLSDPDKIYPGQVLRIVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG59</accession>
    <name>A0A2M9PG59_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sodium:calcium exchanger</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01990</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000073">
        <property type="protein sequence ID" value="PJN96526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007154">
        <property type="term" value="P:cell communication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038081">
        <property type="entry name" value="CalX-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003644">
        <property type="entry name" value="Calx_beta"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03160">
        <property type="entry name" value="Calx-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141072">
        <property type="entry name" value="SSF141072"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Calx-beta" evidence="3">
        <location>
            <begin position="15"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12409" checksum="5FC44B6FCF310F7A" modified="2018-04-25" version="1" fragment="single">MLSIDGARNLEGEYMAFTVRLSEAATDVVTVQYRTLNGSALVESEVVSWSSNRLAGTLTFAPGEQVKTVYALVSNDAEDEIDENVLLEIHDPAGATFGGGAQSLTAVGWALDDDGVGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG88</accession>
    <name>A0A2M9PG88_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">Argininosuccinate synthase</fullName>
            <ecNumber evidence="2 9">6.3.4.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Citrulline--aspartate ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">argG</name>
        <name evidence="10" type="ORF">CNY89_01765</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + L-aspartate + L-citrulline = 2-(N(omega)-L-arginino)succinate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10932"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57472"/>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.4.5"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 9">Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the argininosuccinate synthase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.5" evidence="2 9"/>
    <dbReference type="EMBL" id="PHNO01000064">
        <property type="protein sequence ID" value="PJN96567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
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        <property type="reaction ID" value="UER00113"/>
    </dbReference>
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        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004055">
        <property type="term" value="F:argininosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01999">
        <property type="entry name" value="Argininosuccinate_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00005">
        <property type="entry name" value="Arg_succ_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001518">
        <property type="entry name" value="Arginosuc_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018223">
        <property type="entry name" value="Arginosuc_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023434">
        <property type="entry name" value="Arginosuc_synth_type_1_subfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024074">
        <property type="entry name" value="AS_cat/multimer_dom_body"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11587">
        <property type="entry name" value="PTHR11587"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00764">
        <property type="entry name" value="Arginosuc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69864">
        <property type="entry name" value="SSF69864"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00032">
        <property type="entry name" value="argG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00564">
        <property type="entry name" value="ARGININOSUCCIN_SYN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00565">
        <property type="entry name" value="ARGININOSUCCIN_SYN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 9" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="12"/>
            <end position="20"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="97"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="122"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="183"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>L-citrulline</name>
            <dbReference type="ChEBI" id="CHEBI:57743"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="407" mass="44913" checksum="1FD6D39AC17AEFB7" modified="2018-04-25" version="1">MTPPKPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEELEPARKKAELLGIKPENIHIEDLREEFVRDFVFPMFRANAQYEGLYLLGTSIARPLIAKRLVEIAEATGADAVAHGATGKGNDQVRFELAAYALNPAIQVIAPWRLWDLTSRTKLLAFAEENQIPVAKDKRGEAPFSVDANLLHTSSEGKVLENPAEEAPEYVYQRTVSPEKAPDAPEYVEIGFETGDPVSVNGERLSPASLLTKLNELGGRHGVGRLDLVENRFVGMKSRGVYETPGGTILLMAHRGIESITLDRGAAHLKDELMPRYAELIYNGFWFSPEREMLQALIDSSQIPVNGTVRVKLYKGSVSVVGRSSPDTLYSESHVTFEDDAGAYDQKDAAGFIKINALRLKLLATRDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA3</accession>
    <name>A0A2M9PGA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">NADH-quinone oxidoreductase subunit L</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_01700</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Membrane</location>
            <topology evidence="2 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000061">
        <property type="protein sequence ID" value="PJN96585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018393">
        <property type="entry name" value="NADHpl_OxRdtase_5_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003945">
        <property type="entry name" value="NU5C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001516">
        <property type="entry name" value="Proton_antipo_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42829">
        <property type="entry name" value="PTHR42829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00662">
        <property type="entry name" value="Proton_antipo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01974">
        <property type="entry name" value="NDH_I_L"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="118"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="260"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="291"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="316"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="344"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="385"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="430"/>
            <end position="455"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="476"/>
            <end position="494"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_N" evidence="9">
        <location>
            <begin position="62"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="8">
        <location>
            <begin position="135"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="534"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="534" mass="58092" checksum="7A20D877F9EBDF38" modified="2018-04-25" version="1" fragment="single">MTTIILFAPLLGALLCGFGYKFMGEKAATVTATSLLFLAAFLSWIVFLGFNGETRHVELFPWIQSGTLAVDWGVRLDRLTAIMLIVVTTVSALVHLYSMGYMAHDNNWKHGESYKPRFFAYLSFFTFAMLMLVTADNLLQMFFGWEGVGVASYLLIGFYYRKPSANAAAIKAFVVNRVGDFGFLMGIFALYVMVDSIAFDDIFAAAPALATQQMHFLWRDWTATEVISVLLFVGAMGKSAQLFLHTWLPDAMEGPTPVSALIHAATMVTAGVFLVCRMSPVIEYAPHAKDFIVVIGGVTAFFAATVGLVQNDIKRVIAYSTCSQLGYMFVAAGVGVYSAAMFHLLTHAFFKALLFLCAGSVIHAMHHEQDMRNYGGLRKKIPFTFWAMMIGTLAITGVGIPLTSIGFAGFLSKDAIIESAYAGGTAASGLAFPLLVISALMTSFYSWRLMFMTFYGKPRGDHHAHDHAHESPRVMLIPLGVLAVGAILAGMIWYKPFFGDHNSVNAFFGMPVHAAAAEGAAEEGHGAPAPAEHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB6</accession>
    <name>A0A2M9PGB6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000076">
        <property type="protein sequence ID" value="PJN96514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9866" checksum="93FF978511283052" modified="2018-04-25" version="1">MTGGVFATLEIDCDEPLALRDFTLDLGEAAGGEVLATFEDGAVTLHVLGRREIPDGGLTCAVDGHRRGRVTLDARLLLRLAAEARARADMSTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG9</accession>
    <name>A0A2M9PGG9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01400</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000048">
        <property type="protein sequence ID" value="PJN96631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="122"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="155"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="200"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="253"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="309"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="334"/>
            <end position="353"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="358" mass="38107" checksum="839060735E273FDE" modified="2018-04-25" version="1">MVETRTQPSQEFEKVLVKSATEVASFDRHKKTPLERVQHVLHSNPALVPLIVLLMSVIVFGAILGTRFFSPFSLTLILQQVAIVGIVGAAQTLVILTAGIDLSVGAIMVLSSVVMGQFTFRYGIPAPISVLCGFAVGALVGYINGFLVARIKLPPFIVTLGMWQIVLATNFLYSRNETIRAQEIEANAPLLQFFGQQVRLGGAVLTYGVIVMVLLVLVLAYVLKHTAWGRHVYAIGDDPAAAELAGIQAKKTLISVYVLSGLICSLAGWVLIGRIGSVSPTAGQFANIESITAVVIGGISLFGGRGSILGMLFGALIVGVFGLGLRLVGTDPQWTYLLIGVLIIAAVAIDQWIRKVSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL0</accession>
    <name>A0A2M9PGL0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Outer membrane protein assembly factor BamD</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">bamD</name>
        <name evidence="3" type="ORF">CNY89_01200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Part of the Bam complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the BamD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000041">
        <property type="protein sequence ID" value="PJN96662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043165">
        <property type="term" value="P:Gram-negative-bacterium-type cell outer membrane assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051205">
        <property type="term" value="P:protein insertion into membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd15830">
        <property type="entry name" value="BamD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00922">
        <property type="entry name" value="OM_assembly_BamD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017689">
        <property type="entry name" value="BamD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039565">
        <property type="entry name" value="BamD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13525">
        <property type="entry name" value="YfiO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03302">
        <property type="entry name" value="OM_YfiO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="YfiO" evidence="2">
        <location>
            <begin position="5"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="247" mass="28171" checksum="7BEEA9D77380C2EE" modified="2018-04-25" version="1">MESRDAQSIYLDAERILAENRPRDAAKMFDEVERLYPYSDWAKRAMLMSAFAYHEGGQYAESRAAADRYLAFFPADADAPYAQFLIALSYYDQIVDIGRDQANTFEALQEMRDIIERYPDSDYAASAQMKFELALDHLAGKEMEVGRFYLGRGHYTAAINRFRVVVEDYQTTTHTPEALHRLVEAYLSLGLVQEAQTAAAILGHNFQGSTWYADSYALLTGRGLRPADVGDSWLNQTYRQVVLGKWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ7</accession>
    <name>A0A2M9PGZ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000009">
        <property type="protein sequence ID" value="PJN96819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="16184" checksum="C3C963F61CE47512" modified="2018-04-25" version="1">MTRARQSISRWKARHSAIVLFGIALNLTFALPLLFCPRWVLELFDIPAGPSTIWPQFAGGLLILLSVFYLPMAWDLDRYRIFAWLAIFPSRSFGVAFFLIAILRGEPGGFFVAVLIDGSIAIATLFCLIRIVTLEQAIADGRAQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P481</accession>
    <name>A0A2M9P481_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004765">
        <property type="protein sequence ID" value="PJN92361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7619" checksum="74923D1093A562D8" modified="2018-04-25" version="1" fragment="single">LALADEDFPAARKALGDLAETQPTARSLAIMAALERGSRSPTRISRPPARRWGIWPRPSPRRAASPSWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D1</accession>
    <name>A0A2M9P4D1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">BstEII</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004623">
        <property type="protein sequence ID" value="PJN92411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8321" checksum="4A348EF0D4A75525" modified="2018-04-25" version="1" fragment="single">DNFGPGFRAITEVQKRFGSRPIPDEALCAILWEYKDRGKKGYDLTERFFIMLREKFPTLQLSGPERAGKDVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M6</accession>
    <name>A0A2M9P4M6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24585</name>
        <name evidence="1" type="ORF">CNY89_29380</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004411">
        <property type="protein sequence ID" value="PJN92475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002866">
        <property type="protein sequence ID" value="PJN93010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7080" checksum="946D33A8DA3CE349" modified="2018-04-25" version="1" fragment="single">MLPETLILCPAPGSEAMRLALEAARRVYDESGLSEEEREQDMRLQRQFLAFVRGEMPDFAHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N0</accession>
    <name>A0A2M9P4N0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004284">
        <property type="protein sequence ID" value="PJN92511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="9050" checksum="A0E7BB29D522688A" modified="2018-04-25" version="1" fragment="single">LVYVSERNPLDSYNTISTLKERYNLTVEGTYEPLVILSPIGSKVMAAGALMAAIEHDLAVQYIETVRYEFDGSDRREDGPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N8</accession>
    <name>A0A2M9P4N8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004249">
        <property type="protein sequence ID" value="PJN92521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8760" checksum="B51B9666A1F6618F" modified="2018-04-25" version="1" fragment="single">GGWRWSCKAPGVKIDGFALQPMIRRPRAQELILGVARDPIFGPVILFGAGGVAVELQGPRGQDRRLRAPADDPPPPRPGADP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S3</accession>
    <name>A0A2M9P4S3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004186">
        <property type="protein sequence ID" value="PJN92542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9021" checksum="FD0CAB3863A3A5FD" modified="2018-04-25" version="1" fragment="single">FRSEGDRHRRGQPAEDPIGGGRPARSRHDLFHRFPRGGEFGPDGLRFRLADSGAKAIVTDAANLPKIRSVAGDLPDLATIFSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X4</accession>
    <name>A0A2M9P4X4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21535</name>
        <name evidence="1" type="ORF">CNY89_28490</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004089">
        <property type="protein sequence ID" value="PJN92579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002062">
        <property type="protein sequence ID" value="PJN93346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3376" checksum="2EFA391A92D187D6" modified="2018-04-25" version="1" fragment="single">MAAAGPYKIEIVLTDNGIQFADLPKNRSGLTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P537</accession>
    <name>A0A2M9P537_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003919">
        <property type="protein sequence ID" value="PJN92633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9326" checksum="6E50FDA8D9BAABE4" modified="2018-04-25" version="1" fragment="single">AAVAATAFSTPLLAQDAEFQLPEQCTTAAAAGGMDHSAMGHGGMQDDQPGGMDSGMMGMMGMMGMGGMDLESIPEHVQENMRRMMISMPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P558</accession>
    <name>A0A2M9P558_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003734">
        <property type="protein sequence ID" value="PJN92694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="2"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10395" checksum="F6889957181012A8" modified="2018-04-25" version="1" fragment="single">VAAMKPWLEKQLSQLSSGSKLAEHICYTLGAWGGLIHFLDDGRLELDTNSIENLIRPVALTRKNSLFAGHEIGTEHWALLASLVATCKLNGVEPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C8</accession>
    <name>A0A2M9P5C8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dihydrolipoamide succinyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27265</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003685">
        <property type="protein sequence ID" value="PJN92718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="2-oxoacid_dh" evidence="2">
        <location>
            <begin position="22"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10752" checksum="1E8BDCFE19695C16" modified="2018-04-25" version="1" fragment="single">PAAAPAPVSIPRAPVPAEDAAREERVKMTRLRQTIARRLKEAQNTAAMLTTYNEVDMTASMELRNAYKDQFEKKHGVKLGFMSFFTKACCHALKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M0</accession>
    <name>A0A2M9P5M0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">S4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_26060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003313">
        <property type="protein sequence ID" value="PJN92837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="2">
        <location>
            <begin position="8"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="28"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7055" checksum="43662E317FBF3756" modified="2018-04-25" version="1" fragment="single">MEPASAIRLDKWLWHARLCKTRSLAARLIEGKPDRKPEGEPRQAPRPPRSDKPIDPDNPFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P640</accession>
    <name>A0A2M9P640_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24785</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002929">
        <property type="protein sequence ID" value="PJN92985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="17"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8624" checksum="E83CC82CE58CC1FE" modified="2018-04-25" version="1" fragment="single">GTEFTSSAVLAFTQAAGLDWRYIAPGKPTQNAFAESFQGKMRDECLNEHLFFSMNHARASSPAGSRTSTRRGPIQRSAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P658</accession>
    <name>A0A2M9P658_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002785">
        <property type="protein sequence ID" value="PJN93041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8189" checksum="871C00C445E875E0" modified="2018-04-25" version="1" fragment="single">MSTIKSEDPANRAVVNELFLQGASNVKISGVVLDYTGEQASNTESWLRGSPFAFKATTNVTLSGVEVKGHLVNGYGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P673</accession>
    <name>A0A2M9P673_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase M4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002818">
        <property type="protein sequence ID" value="PJN93027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13876" checksum="D87EE8244FA45BC4" modified="2018-04-25" version="1" fragment="single">DHDAGEVVFGHFRPTKATPSVPNREGSHVYLSLCNDVIVHEVTHAILDGLRADFFVASHPDVPAFHEAFADLVAAFQRFSYQDAVAAALGKARGTLSQSEILTGIGLEFGKAIHPDRKALRTLLGDAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G5</accession>
    <name>A0A2M9P6G5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphogluconate dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_23570</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IlvD/Edd family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002573">
        <property type="protein sequence ID" value="PJN93117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004456">
        <property type="term" value="F:phosphogluconate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019521">
        <property type="term" value="P:D-gluconate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009255">
        <property type="term" value="P:Entner-Doudoroff pathway through 6-phosphogluconate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004786">
        <property type="entry name" value="6-phosphgluc_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020558">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43661:SF1">
        <property type="entry name" value="PTHR43661:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00887">
        <property type="entry name" value="ILVD_EDD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3" id="KW-0311">Gluconate utilization</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="14967" checksum="D12AA0BA48E506E7" modified="2018-04-25" version="1" fragment="single">GGDPHRHHLLRHRRQRAHRRVHCRLAGARAAGGQIIEAPARVFHDQEEVKQAFRAGEFTSDTVVVVRFQGPKANGMPELHSLTPILAVLQDKGFKVALVTDGRMSGASGKVPSAIHVSPEALDGGPLARLRDGDLVRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L8</accession>
    <name>A0A2M9P6L8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002403">
        <property type="protein sequence ID" value="PJN93183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="114"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="17199" checksum="E68036A9171D16A9" modified="2018-04-25" version="1" fragment="single">MIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQLSFETFLVLWRFLRHGIFKCFFIFYSDRFPLNYLFAAFIAFMTALAISTSSLLTMAIQIFLMLYAFVFRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M7</accession>
    <name>A0A2M9P6M7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002376">
        <property type="protein sequence ID" value="PJN93193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8526" checksum="DD022F27730AD98D" modified="2018-04-25" version="1" fragment="single">MLPFSTEFPVIPSDNRAAFVAEVVAWIRGMQHQTVLSSKSEAELDRANVHVRSNSGEELRMRELRTGDGWTAIGIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q5</accession>
    <name>A0A2M9P6Q5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002402">
        <property type="protein sequence ID" value="PJN93185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="7045" checksum="4D2FEBA5BACED384" modified="2018-04-25" version="1" fragment="single">MPQRKHEPEEIVAKPRQVDVLASQGRPVAEAIRTIGVTPFTSYRWRKEFGGLKSDQVRRLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V4</accession>
    <name>A0A2M9P6V4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mrr_cat_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002240">
        <property type="protein sequence ID" value="PJN93263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1350.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039442">
        <property type="entry name" value="Mrr-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011856">
        <property type="entry name" value="tRNA_endonuc-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13156">
        <property type="entry name" value="Mrr_cat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mrr_cat_2" evidence="1">
        <location>
            <begin position="45"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="13228" checksum="EC6440C06E2EDEA8" modified="2018-04-25" version="1" fragment="single">MRPRPPRKSASTPFRHFYAQYRSAARTEREKGTYFERLTIAFLEHDPIQVEQYDGIWTYAEWAKKKGWDGRDTGIDLVAKLRHEQGYAAIQCKFYDPDHRIRKEDIDSFIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P733</accession>
    <name>A0A2M9P733_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002095">
        <property type="protein sequence ID" value="PJN93329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12183" checksum="66BAA8771BFE677F" modified="2018-04-25" version="1">MDMHEARNQPDVRDAGGLEWMHALMSKGETPHKLGFIYMLLGDGGASNIDPFAAEETPDNNWIVSGPHVMIVGTEAKSLLEGYPRAAVADPAKPYVMWAGTPYEHLMLSMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P760</accession>
    <name>A0A2M9P760_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protoporphyrinogen IX oxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="19" type="ORF">CNY89_07800</name>
        <name evidence="18" type="ORF">CNY89_21100</name>
    </gene>
    <organism evidence="18 20">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 20" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 20">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3 A + protoporphyrinogen IX = 3 AH2 + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:62000"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the HemJ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001970">
        <property type="protein sequence ID" value="PJN93396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000402">
        <property type="protein sequence ID" value="PJN95552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005265">
        <property type="entry name" value="HemJ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03653">
        <property type="entry name" value="UPF0093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0349">Heme</keyword>
    <keyword evidence="14" id="KW-0408">Iron</keyword>
    <keyword evidence="15 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="20" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="26"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="16">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="18">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00006501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00017504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="PJN93396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="EMBL" id="PJN95552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5939" checksum="92CDAF3B23293F8A" modified="2018-04-25" version="1" fragment="single">MLGRQGERTGEKRGQSAGGGYPWTKALHIVSMVAWMAGLFYLPRLFVYHAERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P788</accession>
    <name>A0A2M9P788_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ti-type conjugative transfer relaxase TraA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19185</name>
        <name evidence="4" type="ORF">CNY89_21265</name>
    </gene>
    <organism evidence="4 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MobA/MobL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002010">
        <property type="protein sequence ID" value="PJN93375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001575">
        <property type="protein sequence ID" value="PJN93671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005053">
        <property type="entry name" value="MobA_MobL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03389">
        <property type="entry name" value="MobA_MobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0184">Conjugation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobA_MobL" evidence="3">
        <location>
            <begin position="17"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11475" checksum="59E0F83B847AC16A" modified="2018-04-25" version="1" fragment="single">MAIYHCSMKPVSRSSGRSSVAAAAYRSGQRLVNERDGLTHDHSHRKDVVHSEIVLPEGVKAAWAKDRSALWNAAEAAEKRKDGRTAREFEIALPHELTAEQRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A6</accession>
    <name>A0A2M9P7A6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DUF1049 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_20740</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001887">
        <property type="protein sequence ID" value="PJN93444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010445">
        <property type="entry name" value="LapA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06305">
        <property type="entry name" value="LapA_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="domain" description="LapA_dom" evidence="6">
        <location>
            <begin position="12"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11073" checksum="770C3AE5A1F5351F" modified="2018-04-25" version="1" fragment="single">ILIAIVVLAVANRGMVTLHLLPEGLSALGQRSIELPLHLVGLGLILLGMILGYILEWLREHKHRRRASIKSREAAELNREVTQLRKANAKDDEVLALIGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F5</accession>
    <name>A0A2M9P7F5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EH_Signature domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001813">
        <property type="protein sequence ID" value="PJN93496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028943">
        <property type="entry name" value="EH_Signature_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15611">
        <property type="entry name" value="EH_Signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EH_Signature" evidence="1">
        <location>
            <begin position="13"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF15611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="18461" checksum="3D93DAC33A0B02A2" modified="2018-04-25" version="1" fragment="single">AVYMDTYIPGAAHSSELGHALGAVRDRLGGRWGALLTRFPEFFDPTRAQEDIARQMQAMDDPWSELREIGIRRPDGDGLMTAVHLAFVRDLAPRLRERETIDRLLRWLKPDSQSEARIAGAGAALDALLSPWKDMSPDHDLKSYLTAKINALYGHPRMARTTPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P802</accession>
    <name>A0A2M9P802_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-directed RNA polymerase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001580">
        <property type="protein sequence ID" value="PJN93667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0804">Transcription</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="24397" checksum="B32B1A1EECF16EDB" modified="2018-04-25" version="1" fragment="single">REGVRISRGDKLAEWDPYTLPIIAEKPGVAKFVDLVAGFSVREETDDATGISQKIVTDWRAAPRGNDLKPEIIVMDPETGEPMRLDNGNPEVHAMSVDAILSVEDGQAVRPGDVLARIPREGAKTKDITGGLPRVAELFEARRPKDHAIIAEISGHVRFGKDFKNKRRITIVPVEEGGEPIEYMVPKGKHIPVQEGDFIQKGEYIMDGNPAPHDILAILGIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P829</accession>
    <name>A0A2M9P829_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001565">
        <property type="protein sequence ID" value="PJN93679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10260" checksum="C23EA4778D6C98DA" modified="2018-04-25" version="1">MGQPSSFWFAVLLAGIVRAATTNESWRSAVVSCFCGAVIAYMLTGSVMHWLALPQAPYFPAVAFIVGTIGQSAVRLVISITSVSVLAELVRAWRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P860</accession>
    <name>A0A2M9P860_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">PQQ-dependent dehydrogenase, methanol/ethanol family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_18945</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial PQQ dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001532">
        <property type="protein sequence ID" value="PJN93709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001479">
        <property type="entry name" value="Quinoprotein_DH_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13360">
        <property type="entry name" value="PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00364">
        <property type="entry name" value="BACTERIAL_PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0634">PQQ</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="233" mass="24911" checksum="500A5310FA257CF2" modified="2018-04-25" version="1" fragment="single">WAFSLGGEKQRGQESQPIVYDGVMYITGSYSRLFAIDVKTGKELWQFDARLPEGILPCCDVVNRGAAIFGDNIYFGTLDARLVALNRKTGDVVWNKKIADYKEGYSYTAAPLIVDGLVITGNSGGEFGIVGEVQARDAATGETVWTRPMIEGHMGTLNGKESTMTGVLNATWPGDMWKTGGGATWLGGSYDADTDTLIFGAGNPSPWNSHLRGAGTPVEGNKGDNLYAASRVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A1</accession>
    <name>A0A2M9P8A1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001467">
        <property type="protein sequence ID" value="PJN93772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11332" checksum="490B6E66ED62D53B" modified="2018-04-25" version="1" fragment="single">MKEAWRRGFRGLACIIAIAYDAQLAPVDARSLTLADSRTDGVKLWFELARAKSGRSAHGTVTRRTEALVRAYAATLPDDYLTTAPLFLTRRGAVYTKNSLGDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G6</accession>
    <name>A0A2M9P8G6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001425">
        <property type="protein sequence ID" value="PJN93818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12020" checksum="E4665CD7A6E1C99C" modified="2018-04-25" version="1" fragment="single">PDLARAFLRKAESEGLARKTVSKEALDILKKQDGKVARVDFYVVPMSFFADPILVGSDASAPYAVTLDKLGTGMWMVYAVAVDREGVQAQSIPVHITVLPKDGGGMDNMKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J5</accession>
    <name>A0A2M9P8J5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001389">
        <property type="protein sequence ID" value="PJN93867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="237" mass="25483" checksum="49FF37FBE7F53FE9" modified="2018-04-25" version="1" fragment="single">MLAPGGLFLGQARGRALFHSGEGHLLTIGGTGGGKSSGLVVPALCELTEGAVVVTDPSGELAAMTARRRAEIGPVIFLNPFGSVFEADTGLSFRDDGMNLLAHLDPAGANFISDVGAFARLLMVTDRRDSGSYWNDEGAEFLSLLIAATLLYEPADCHDLSFIYRRARDSAEEMEDYLWHLEGKDRPAISDDATRFRSMIEGAPQQWQGIIAKVALATKRYAPGEPLGRHVAKDGFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q0</accession>
    <name>A0A2M9P8Q0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Virulence protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001336">
        <property type="protein sequence ID" value="PJN93925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009744">
        <property type="entry name" value="VirC1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07015">
        <property type="entry name" value="VirC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6870" checksum="B939C5F7C629C990" modified="2018-04-25" version="1" fragment="single">PMLATKLRDRDAYASMKRDGMLHLTVRAKEADPASRISAKHFKIAMAEADELATDVLVALEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R9</accession>
    <name>A0A2M9P8R9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001332">
        <property type="protein sequence ID" value="PJN93930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16779" checksum="1B1DFE6F98273428" modified="2018-04-25" version="1" fragment="single">FSGALVARMETRAIRNQSPALTASMQEGALVEKATAIMDGWSFAYAARIRRMIDAIAKECVEVSLSPNARLGAGANAIAIPEAEMQQLLAEEDDLALLLKHALANGTIVVMRDYGQGGKSWCLIELSGTVCIAHGLTLKRGGFLEKNLSYLREVSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V5</accession>
    <name>A0A2M9P8V5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001300">
        <property type="protein sequence ID" value="PJN93970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11440" checksum="A064F99391EECB71" modified="2018-04-25" version="1">MRGAATPELRPWRRLARSPEKLLAGIDSYADRLEAEMAAEGVVLLRQPAASLSAHGLTRENMTRGSLRIDGDAGHGEDDATHANAEYGALFWEAYAPRLAGARQPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I8</accession>
    <name>A0A2M9P9I8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001126">
        <property type="protein sequence ID" value="PJN94208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8121" checksum="DA0F30CE8EA1A9C2" modified="2018-04-25" version="1">MYAAVCHRMNGPESALEKGTSLGFLRMLHAAPTIPDASPGGRSRKADKRESVEEILYFLRAGCAWRLSPHDVPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N3</accession>
    <name>A0A2M9P9N3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_15590</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001091">
        <property type="protein sequence ID" value="PJN94254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="126"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="161"/>
            <end position="168"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="379" mass="40198" checksum="C60EBA0EE831EA99" modified="2018-04-25" version="1" fragment="single">TFADDGEEDAYVAEAVTAHVGVFRRLMQVFTLSWSALFLLNAFLAVGVTGIALAAWDAGTMTTAMVATAIPFVLQIVNISGWILEVGANVFRQIGTARDSMETIAKPLTLTDAPGARPMAVTAGGIAFDRVSFDYWRGDRGAVIRDLSLTVGPGEKVGLVGRSGAGKSTLVNLALRMFDVAGGAIRIDGQDIRSVTQASLRRAIGVVGQDTSLLHRSVRENVKYGRSGASDAEMIEAARRANVHEVILELEDPEGRRGYDAHVGERGVKLSGGQRQRIALARAILKDAPILILDEATSALDSEVEAAIQASLETLMAGKTVIAVAHRLSTIARMDRIVVMDRGRVVEEGPHAALIARGGIYAGLWARQSGGFLDAGPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P1</accession>
    <name>A0A2M9P9P1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001087">
        <property type="protein sequence ID" value="PJN94258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006279">
        <property type="entry name" value="SoxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038561">
        <property type="entry name" value="SoxD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04267">
        <property type="entry name" value="SoxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6455" checksum="7F4A53FD8E9DD510" modified="2018-04-25" version="1">MLLIHCPYCEQDLPELEFAYAGEAHIARPLDPMSLSDEAPAAGRRRSRRPWPAPPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P2</accession>
    <name>A0A2M9P9P2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Ribonuclease</fullName>
            <ecNumber evidence="12">3.1.26.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_15675</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 12">Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 12">
            <text>Endonucleolytic cleavage to 5'-phosphomonoester.</text>
            <dbReference type="EC" id="3.1.26.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5 12">Belongs to the RNase HII family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.26.4" evidence="12"/>
    <dbReference type="EMBL" id="PHNO01001102">
        <property type="protein sequence ID" value="PJN94239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004523">
        <property type="term" value="F:RNA-DNA hybrid ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022898">
        <property type="entry name" value="RNase_HII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001352">
        <property type="entry name" value="RNase_HII/HIII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024567">
        <property type="entry name" value="RNase_HII/HIII_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954">
        <property type="entry name" value="PTHR10954"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10954:SF18">
        <property type="entry name" value="PTHR10954:SF18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01351">
        <property type="entry name" value="RNase_HII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 12" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="10 12" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 12" id="KW-0540">Nuclease</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase_HII" evidence="13">
        <location>
            <begin position="3"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007383"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7639" checksum="C69A218BDFE53C19" modified="2018-04-25" version="1" fragment="single">RCLSIAAASIVAKVARDRMMRDLAAVHPGYGWETNMGYGVRAHAEGLARLGVTPHHRRSFKPVQIALSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S8</accession>
    <name>A0A2M9P9S8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cell wall hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001080">
        <property type="protein sequence ID" value="PJN94271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011105">
        <property type="entry name" value="Cell_wall_hydrolase_SleB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042047">
        <property type="entry name" value="SleB_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07486">
        <property type="entry name" value="Hydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_2" evidence="1">
        <location>
            <begin position="23"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15260" checksum="C1BD4DF2C9C196E9" modified="2018-04-25" version="1">MPAVSGDAQFQCLAQAVYFESRGEPLSGQIAVAEVVLNRVDNPGYPRSICGVTKQGAGSGRGCQFSYACDGRPDVMTSSVSKARSEKIARMLIDGRPRSVTSGATHFHATYVRPDWSRKFARTAAIGNHVFYRQSTRVASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA54</accession>
    <name>A0A2M9PA54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14685</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000999">
        <property type="protein sequence ID" value="PJN94409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="216"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="1"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="412"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="412" mass="44290" checksum="729532F024BC57BB" modified="2018-04-25" version="1" fragment="single">MALTALSTAAYAKIMQWIIAAFEAGQYSVMYWGPAVVLGTALVSGVTDYLRQTTIQRAVIRTETDLQKEMFSQLVGTDLARLRSEAPAGLAARFSSDIGLVSRSVKSIMSSITAVFTIIGAFAMMLTIDWALTLGMIVVFLLALAPVTIIGQRLKRISRRTQNQVAAMTSSVTEGLSGIRMARTYRLEEPLSENAAAVFEGLFGLKVKANRWEARLSPVMELLGAVAVAILLFVVGWRMKLGTISLADFTGLLTGLGVAISPARKLGSTYAAAAMGGAALERIFMLFDSQNTILDGPRTLDRAVGRIDFEHVDFTYPDGHVALSDVSITVQPGQRVAFVGRSGAGKSTVFNLLPRLYDPTDGRILMDGIDTRELTLASLRDQLAVVSQDSVLLTGTVAQNIGFGRRGATRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA76</accession>
    <name>A0A2M9PA76_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycogen debranching enzyme GlgX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14570</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000985">
        <property type="protein sequence ID" value="PJN94429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="1">
        <location>
            <begin position="59"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="417" mass="45749" checksum="CF7ADBFAA78A5A49" modified="2018-04-25" version="1" fragment="single">SRARAVVEALPALVPPAPPVFRPGGLVYELPVRPFTMLHPDVPPELRGTVAALAHPAILDHLTRLRVDAVELMPITAWIDERHLGPLGLVNGWGYNPVAMMALDPRLCPGGMAELRETTAALRAAGIGVILDVVFNHTGESDVFGPVLSMRGLDARAYYWHAPDGSLVNDTGCGNTLACQNPVVRALILDTLRHFVGQAGIDGYRFDLAPIMGRTATGFDPDAPLLREMLADPLLADRVLIAEPWDIGPGGYQLGRFPERFLEWNDAYRDRARRFWRGDRHMLGDFVTALAGSADVFDPPATRSVNFIAAHDGFTLADMTAYRHKHNEANGEQNHDGHNENHSWNHGVEGATDDPAVQAARHHDLRALLGTLFASRGTIQLTAGDEFGRSQRGNNNAYAQDNALTWLDWEGRDRDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA82</accession>
    <name>A0A2M9PA82_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000977">
        <property type="protein sequence ID" value="PJN94437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="27501" checksum="8500E17591FCD7F6" modified="2018-04-25" version="1">MSPQPETLPRFPGSGRLAGKVALITGGDSGIGRATAVLFAREGAQVAIHYKDEHGDAEETLLLVKAEGAEGMSISGDLGERAEAQAAVAEVLDRFGRLDVLVNNAGEQHPQDSVLDISEAQLKRTFDTNIFSQFYLAQAALPHLPAGSAIVNVTSVTAFRGQDKLVDYASTKGAILSFTRALSGQLAEKGVRVNAVAPGPIWTPLIPSTFPAEKVARFGTDVPLGRPGQPNEVAPCILFLACADSSFMTGQTLHPNGGELVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB5</accession>
    <name>A0A2M9PAB5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000959">
        <property type="protein sequence ID" value="PJN94464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="113"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="30071" checksum="297EA2390F2F7676" modified="2018-04-25" version="1">MSAMAAFMLLAILGVGIFYLKLQEMDPGLRQSLAADPPLTLFLMLEAEADAKGRSLGALGSILFAETLIAALPEPATEADLAMAQEVVFQGPVPRRMADLVRFLQRCHQFPDGARLHAPETPRPAPVRPQTKPNPSETLMLDNSSSPAGAAAGLFEVADYIELGRLVADWTRDPQTRPDCIADLVAQLDGIARVPDNFKDVKFVDGAVDTLVIRLPERGVMQETMTSLESPLVGDRYPLPKFYDDIYHRHFGPEMTSLDTFLARMGDYTIAQCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE9</accession>
    <name>A0A2M9PAE9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000945">
        <property type="protein sequence ID" value="PJN94491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18847" checksum="5E88158897BB79D3" modified="2018-04-25" version="1">MEVIEMANGQTSTARGSRKPTKAEFNAFMCKVLDPLPDAETMDRELPRLEARARAQAKEAVRTAWHKAYMLYQIARDLESHYNSLRILHAFYPEEFGSIGLAHNDAVTKLREAITHVIATPAPRLQELAWKKKLASVRERPDSEVLAARLKLIEADEARLAAAPKKGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF0</accession>
    <name>A0A2M9PAF0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000929">
        <property type="protein sequence ID" value="PJN94520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="28003" checksum="F6C77770F4B60C55" modified="2018-04-25" version="1">MSDKATSSDIKAALAVRYQPPEWCLFFEVSNDTGMNSRRYADAVAMSIWPSRGYAIHGHEIKVSRSDFIAEMRDPAKADAVGEFCDFWWLVTPPKLVAAEELPTTWGLMEMTGAGMRIKKQAPKREASAPTRGFLASMIRRGQDMEQAHIRRAIEKGEAERQARVNREVERRTKELREQVEKQAKWQDEFDAAFGVYPPPYTSPAEMAARIKLAQQIGGSWGALAQARNSALRLAEAIAAADPSAAAEMAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH8</accession>
    <name>A0A2M9PAH8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000929">
        <property type="protein sequence ID" value="PJN94521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7297" checksum="FF5C8F4B79ABF409" modified="2018-04-25" version="1">MASIIEAAKAKIRARGQSNQDRWKAALAAGHKEKAAVLGGYAAGLMDALAMLEMEQRPFDRAAGRGEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL0</accession>
    <name>A0A2M9PAL0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TfoX-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000913">
        <property type="protein sequence ID" value="PJN94551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007076">
        <property type="entry name" value="TfoX_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04993">
        <property type="entry name" value="TfoX_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TfoX_N" evidence="1">
        <location>
            <begin position="13"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11674" checksum="1482F0264B09FE77" modified="2018-04-25" version="1">MALSAEDRAFVAELFAGVGDVEVRRAMAGVAVYSRGRVFAMMMGDGRIRLKAKDALAQALQAEGSEQFAYSRKDGKVVRTGYWTLPEAALDDPDAAADWGRQALAAAYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL7</accession>
    <name>A0A2M9PAL7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidyl-prolyl cis-trans isomerase</fullName>
            <shortName evidence="2">PPIase</shortName>
            <ecNumber evidence="2">5.2.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_13665</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)</text>
            <dbReference type="Rhea" id="RHEA:16237"/>
            <dbReference type="Rhea" id="RHEA-COMP:10747"/>
            <dbReference type="Rhea" id="RHEA-COMP:10748"/>
            <dbReference type="ChEBI" id="CHEBI:83833"/>
            <dbReference type="ChEBI" id="CHEBI:83834"/>
            <dbReference type="EC" id="5.2.1.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the cyclophilin-type PPIase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.2.1.8" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000893">
        <property type="protein sequence ID" value="PJN94583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003755">
        <property type="term" value="F:peptidyl-prolyl cis-trans isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000413">
        <property type="term" value="P:protein peptidyl-prolyl isomerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.100.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029000">
        <property type="entry name" value="Cyclophilin-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020892">
        <property type="entry name" value="Cyclophilin-type_PPIase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002130">
        <property type="entry name" value="Cyclophilin-type_PPIase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044666">
        <property type="entry name" value="Cyclophilin_A-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45625">
        <property type="entry name" value="PTHR45625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00160">
        <property type="entry name" value="Pro_isomerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00153">
        <property type="entry name" value="CSAPPISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50891">
        <property type="entry name" value="SSF50891"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00170">
        <property type="entry name" value="CSA_PPIASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50072">
        <property type="entry name" value="CSA_PPIASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0697">Rotamase</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014491733" description="Peptidyl-prolyl cis-trans isomerase" evidence="2">
        <location>
            <begin position="24"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="PPIase cyclophilin-type" evidence="3">
        <location>
            <begin position="30"/>
            <end position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU363019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="19956" checksum="1D8DAE03C4E64B98" modified="2018-04-25" version="1">MIRRGFLALGLGLGLLAAAPLSAQTDPENVLVIEVDGEAKGVVEIALRPDLAPAHVARIQELARTGQYDGVVFHRVIDGFMAQTGDVEFGKAGASGQAGTGGSKLPDLPAEFSDTPFEKGVVGMARTMDPNSANSQFFIMFAPAPSLDGQYTVVGEVISGQDVVDAIKRGVPPNGAVADPDVMTRVHLKSDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP2</accession>
    <name>A0A2M9PAP2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cysteine desulfuration protein SufE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SufE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000887">
        <property type="protein sequence ID" value="PJN94591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003808">
        <property type="entry name" value="Fe-S_metab-assoc_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43597">
        <property type="entry name" value="PTHR43597"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02657">
        <property type="entry name" value="SufE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufE" evidence="2">
        <location>
            <begin position="11"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15250" checksum="024E72709B72D584" modified="2018-04-25" version="1">MATDRFESIADDFAFLDDWEDRYRYVIELGRAMPPLDPGLKTPASKVEGCASQVWMVPSLTGEGAAAKFDFLGESDALIVGGLIAILNALYAGLEPAEVLAVDAPAELGRLGLDQHLSAQRSNGLRAMVGRIRSMAEGALARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR5</accession>
    <name>A0A2M9PAR5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">BAX inhibitor (BI)-1/YccA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13355</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the BI1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000861">
        <property type="protein sequence ID" value="PJN94633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006214">
        <property type="entry name" value="Bax_inhibitor_1-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23291">
        <property type="entry name" value="PTHR23291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01027">
        <property type="entry name" value="Bax1-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="63"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="124"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16670" checksum="46FD944162059439" modified="2018-04-25" version="1" fragment="single">SDSAAQMVFYAFSAVMGLSIAWIFAVFTGASIAQTFFVTAIAFAGLSLWGYTTKKDISAWGSFLFMGLIGLIVASIVNIFLGSPALVFAISVIGVLVFAGLTAYDTQRLKSEYLQLAAMEGQAYLGKAAILGALSLYLNFINLFMMLLQLFGQRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB42</accession>
    <name>A0A2M9PB42_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Xanthine-guanine phosphoribosyltransferase</fullName>
            <shortName evidence="3">XGPRT</shortName>
            <ecNumber evidence="3">2.4.2.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Xanthine phosphoribosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">gpt</name>
        <name evidence="5" type="ORF">CNY89_12675</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Purine salvage pathway enzyme that catalyzes the transfer of the ribosyl-5-phosphate group from 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to the N9 position of the 6-oxopurines guanine and xanthine to form the corresponding ribonucleotides GMP (guanosine 5'-monophosphate) and XMP (xanthosine 5'-monophosphate), with the release of PPi. To a lesser extent, also acts on hypoxanthine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>diphosphate + GMP = 5-phospho-alpha-D-ribose 1-diphosphate + guanine</text>
            <dbReference type="Rhea" id="RHEA:25424"/>
            <dbReference type="ChEBI" id="CHEBI:16235"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>diphosphate + IMP = 5-phospho-alpha-D-ribose 1-diphosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:17973"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>diphosphate + XMP = 5-phospho-alpha-D-ribose 1-diphosphate + xanthine</text>
            <dbReference type="Rhea" id="RHEA:10800"/>
            <dbReference type="ChEBI" id="CHEBI:17712"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57464"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.22"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; GMP biosynthesis via salvage pathway; GMP from guanine: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; XMP biosynthesis via salvage pathway; XMP from xanthine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.22" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000797">
        <property type="protein sequence ID" value="PJN94742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00602">
        <property type="reaction ID" value="UER00658"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00909">
        <property type="reaction ID" value="UER00887"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052657">
        <property type="term" value="F:guanine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004422">
        <property type="term" value="F:hypoxanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000310">
        <property type="term" value="F:xanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032263">
        <property type="term" value="P:GMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032265">
        <property type="term" value="P:XMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01903">
        <property type="entry name" value="XGPRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023747">
        <property type="entry name" value="Xanthine_Guanine_PRibTrfase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39563">
        <property type="entry name" value="PTHR39563"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="4">
        <location>
            <begin position="15"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="3">
        <location>
            <begin position="48"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phospho-alpha-D-ribose 1-diphosphate binding" evidence="3">
        <location>
            <begin position="103"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="107"/>
            <end position="111"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="149"/>
            <end position="150"/>
        </location>
        <ligand>
            <name>GMP</name>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18960" checksum="D14834C5F57B4398" modified="2018-04-25" version="1">MTDRLPHEKGFHISWDQIHRDSRALAWRLDKQGPEEGGAWRAVVAITRGGMAPAMIVARELDIRVIDTISVKSYDWQKQAEAVVLKAPDANLMGDGTGILIVDDLVDTGKTLDLVRRMYPRAHFATVYAKPQGRGMVDTFITEVSQDTWIFFPWDMALQYVRPYRGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB90</accession>
    <name>A0A2M9PB90_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Alanine-phosphoribitol ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_12340</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000765">
        <property type="protein sequence ID" value="PJN94799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000137">
        <property type="entry name" value="Alcohol_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00624">
        <property type="entry name" value="GMC_OXRED_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="4">
        <location>
            <begin position="4"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="5">
        <location>
            <begin position="173"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="6"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000137-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="449" mass="48555" checksum="5701CF2FDDD6E20B" modified="2018-04-25" version="1" fragment="single">FTQARVIGGGSAINAQIYTRGNALDYDEWRQMGCDGWSYEDVLPYFRKAEDNDTWDNRWHGKGGPLGVSRPVAPLPICEAYFKAAAELGIPRNDDMTGETQDGVGYYQLTQRDARRSSAAMAYLAPNRGRANLTVRTNAQVRRLTFDAGRATGVELMDGTRLTAAAEVILSSGAIGSPRLLMLSGIGPADHLAEVGVTPILDQPGVGSNFQDHLDLFAIAEVTGPHTYDRYAKPLWSAVAGLQYLLTKKGPVASSLFETGGFWYADPDARSPDIQLHLGLGSGIEAGVAAMPNGGVTLNSAYLRPRSRGTIRLASSDPAAAPLIDPNYWEDPHDREMSIRGLKLAREILRQPALKAFVLAERLPGPEVRTDQDYFDYACRHAKTDHHPAGTCRMGSDPAAVVDARLRLNGIAGLRVVDASIMPTLVSSNTNAPTIMIAEKAADMIRADH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA1</accession>
    <name>A0A2M9PBA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12285</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000760">
        <property type="protein sequence ID" value="PJN94809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="7072" checksum="690989BEB71C9C01" modified="2018-04-25" version="1">MTCNEREFSQYMQAMDAMQEQSSRYRYSLAGRGWIDLKSDDWELDDILPAHMIAGPEHFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC7</accession>
    <name>A0A2M9PBC7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AAA_28 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000736">
        <property type="protein sequence ID" value="PJN94844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038727">
        <property type="entry name" value="NadR/Ttd14_AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13521">
        <property type="entry name" value="AAA_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_28" evidence="2">
        <location>
            <begin position="6"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="157"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="204" mass="21991" checksum="9811B7C4AFB55DCE" modified="2018-04-25" version="1">MGDHLHVVTGGPGSGKSSLIAALARRGIGVMPEAGRAIIRDQASIGGRALPWRDLALFAELMLAWELRSHGEAARLDRPVAMDRGVPDVLGYLTLCGLRSHGEAARLDRPVAMDRGVPDVLGYLTLCGLPVPAHVEAAARLFRYNRRVFLAPGGRRSTCRTASAGRTGGKPRRRAGSWRRPMRASDTRSSPCRWPGSRRAPISS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF5</accession>
    <name>A0A2M9PBF5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000725">
        <property type="protein sequence ID" value="PJN94865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9297" checksum="19CEFE3A2F146D83" modified="2018-04-25" version="1">MPIDFSSLRKMEAAPAATQARPPADDARVVVLVKLHPGAALPAYLTPRARIAPDLFSVEVTAGELDCIERDPAVASMSLSRNLPMID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL9</accession>
    <name>A0A2M9PBL9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ABC transmembrane type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11460</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000686">
        <property type="protein sequence ID" value="PJN94937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06472">
        <property type="entry name" value="ABC_membrane_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="192"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="78"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="403"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="421"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="439" mass="49290" checksum="E4FF66ACD42BD894" modified="2018-04-25" version="1" fragment="single">MAAPRLDARLDADAPAQALPRPRLHRLRGDPRRISRLPLIRETIGLSEAYFSSADPSRLRGLGFLRLTEGAIGRGFLIGIILINFVQTYLLILFNTWQGALFDSFQNMDEPAFWALVATFLILAAQWVVFAVIEYLFGQYMLIRWRRHMSRGLVSDWLEDDRHYRIQYMGEIADNPDQRISEDIRTYVTSTYSIASSIFSTVLTLAAFVQLLWGLSNLFHATEGNSALGGLAAVPGFLVWVCLAYAVLVTVIGHLIGRPLIWKNYNKEHREADFRFAAARLREYSEQVALLDGRAAERETLFERYDRQVVATLSLVRTTRDLRIFSFTVSQMTDVLPYVLVAPAYFAGVGSLGGLQQTAGAFSRVQGGFTIFLDLYETLAAYKASVNRINGFRAALTRAADKPAIPALEPPPGPPEGQGDRPAQLRHRPDGRQRLCHPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM2</accession>
    <name>A0A2M9PBM2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha-glucosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000689">
        <property type="protein sequence ID" value="PJN94930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="1">
        <location>
            <begin position="12"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="347" mass="40104" checksum="1E2CF60F6F0D9875" modified="2018-04-25" version="1" fragment="single">MNDWWRGAVIYQIYPRSFQDANGDGVGDLAGVADRLDHVARLGVDAIWLSPIFPSPMADMGYDVSDYEGIDPLFGTLADFDKLVDKAHGLGLKVMIDQVLSHSSDKHPWFQESRRDRDNPKADWYVWADPLPDGAPPNSWLSVFGGSAWEWDSGRRQYYLHNFLTTQPDLNFHNPAVQDAALDVLRFWLERGVDGFRFDTVNYYFHDRKLRPNPPRKDLHGIPVNPYDMQDFTRSKNQPENVEFLKRIRTLMNHYSARTTVGEVGESGTKAIEIMAEYTRGEKRLHMAYSFEMLGDAYTPRHFRKAVERFFKGAPDGWPCWSFSNHDVRRHVTRWAPHARDPEALAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP1</accession>
    <name>A0A2M9PBP1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11415</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000683">
        <property type="protein sequence ID" value="PJN94942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024463">
        <property type="entry name" value="Transposase_TnpC_homeodom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13007">
        <property type="entry name" value="LZ_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LZ_Tnp_IS66" evidence="3">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="33"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="5"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6966" checksum="36D878370ACFB569" modified="2018-04-25" version="1" fragment="single">MAGDSERRARLIEQMELQLEELETAATEDAIAADASSAKASMERGAPAAPSGCASRSPAHLPRERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR7</accession>
    <name>A0A2M9PBR7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Molecular chaperone DnaJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000674">
        <property type="protein sequence ID" value="PJN94959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06257">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001623">
        <property type="entry name" value="DnaJ_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018253">
        <property type="entry name" value="DnaJ_domain_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036869">
        <property type="entry name" value="J_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00226">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00625">
        <property type="entry name" value="JDOMAIN"/>
    </dbReference>
    <dbReference type="SMART" id="SM00271">
        <property type="entry name" value="DnaJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46565">
        <property type="entry name" value="SSF46565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00636">
        <property type="entry name" value="DNAJ_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50076">
        <property type="entry name" value="DNAJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="J" evidence="1">
        <location>
            <begin position="5"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12577" checksum="25A2BEB584DB5E7C" modified="2018-04-25" version="1" fragment="single">MAKRDYYETLGVARGASEAEIKKAYRKKAMDLHPDRNQDDPHAEGRFKEINEAYDCLKDGQKKAAYDRFGHAAFENGGGGGFRPGGNGADFASAFSDVFDDLFGDFMGGQRGGAGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS9</accession>
    <name>A0A2M9PBS9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4115 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000667">
        <property type="protein sequence ID" value="PJN94974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025194">
        <property type="entry name" value="DUF4115"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13464">
        <property type="entry name" value="DUF4115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4115" evidence="1">
        <location>
            <begin position="19"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13077" checksum="DE79EE14C209424B" modified="2018-04-25" version="1">MTVAVASGSAAPGQEAPGVTIVAERAAWIRVYRADKSVIFEKILETGETYSPPPETSAPLIWAGNSGSAYVRIGDQLRGPLGPGTKAVRDVPLDPAALVGSLPAVSMAPEVISRAFDAAAPAAPIAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC08</accession>
    <name>A0A2M9PC08_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000613">
        <property type="protein sequence ID" value="PJN95086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8706" checksum="45B0995D3D944916" modified="2018-04-25" version="1">MLEDVRPRHQPGGQARPADLLDEGLPTGGIEPRPVDAPAQLQQVVPWVEDRLQRLAEHVGLRGGVGLSGAHRSVSIRSACQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA9</accession>
    <name>A0A2M9PCA9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000568">
        <property type="protein sequence ID" value="PJN95181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15906" checksum="70A1E6531F1CBBC9" modified="2018-04-25" version="1">MINLLFSAPPEDWPVWRPHLERACAQAGLAVEIADRMDPALVDYVAYSPGGGLHDFGAFPRLKAVQSLWAGVERIVGNPTIQVPLARMVDPGLRDGMTEYVTGHVLRHHLGTDAHVLGQDGIWRNEVVPPLARDRKVGVLGFPGAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF0</accession>
    <name>A0A2M9PCF0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000545">
        <property type="protein sequence ID" value="PJN95221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="13790" checksum="9620C6783395A5C7" modified="2018-04-25" version="1" fragment="single">MTMRAEVGSFAGSRMASLAWRLAARAALNVVSRTRADGVAGEADGAVEGDDRLAGAGGADDAGGAVEVAGDELGLRWMEEDGPPFPRGCEGGFEFGLVADDPEAALRVGMGEGAFQDRRCGGDRRRAAAGGCDEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG5</accession>
    <name>A0A2M9PCG5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tyrosine--tRNA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000540">
        <property type="protein sequence ID" value="PJN95235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="1">
        <location>
            <begin position="40"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10389" checksum="C35701D477FB4C74" modified="2018-04-25" version="1" fragment="single">AAAEATARAVFEEGGLGEALEVVTLSAADVGAGMASAHLLVSTGLVKSGKEAKRLIGERGLRLDNELVSDPNTLVTAETIARGLKVSIGKKRHALVRLADQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH2</accession>
    <name>A0A2M9PCH2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000545">
        <property type="protein sequence ID" value="PJN95223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9449" checksum="4E3C8CB9FC8816D9" modified="2018-04-25" version="1">MSIGLVVKEGVLHVASLLKNPAAPGWVTLVLLSFLAIAVFWFIRRTRAQKNAVAWLGDQIRQFPDAPASPPELSMSILPQGRSELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH4</accession>
    <name>A0A2M9PCH4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Catalase</fullName>
            <ecNumber evidence="5">1.11.1.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_09825</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 H2O2 = 2 H2O + O2</text>
            <dbReference type="Rhea" id="RHEA:20309"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="EC" id="1.11.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 13">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the catalase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.11.1.6" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000553">
        <property type="protein sequence ID" value="PJN95212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004096">
        <property type="term" value="F:catalase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042744">
        <property type="term" value="P:hydrogen peroxide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08156">
        <property type="entry name" value="catalase_clade_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018028">
        <property type="entry name" value="Catalase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040333">
        <property type="entry name" value="Catalase_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024711">
        <property type="entry name" value="Catalase_clade1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011614">
        <property type="entry name" value="Catalase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002226">
        <property type="entry name" value="Catalase_haem_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010582">
        <property type="entry name" value="Catalase_immune_responsive"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020835">
        <property type="entry name" value="Catalase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11465">
        <property type="entry name" value="PTHR11465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00199">
        <property type="entry name" value="Catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06628">
        <property type="entry name" value="Catalase-rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038928">
        <property type="entry name" value="Catalase_clade1-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00067">
        <property type="entry name" value="CATALASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01060">
        <property type="entry name" value="Catalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56634">
        <property type="entry name" value="SSF56634"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00437">
        <property type="entry name" value="CATALASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51402">
        <property type="entry name" value="CATALASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 13" id="KW-0349">Heme</keyword>
    <keyword evidence="11" id="KW-0376">Hydrogen peroxide</keyword>
    <keyword evidence="10 13" id="KW-0408">Iron</keyword>
    <keyword evidence="8 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Catalase" evidence="14">
        <location>
            <begin position="6"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <feature type="active site" evidence="12">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="13">
        <location>
            <position position="335"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR038928-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR038928-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM01060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN95212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="485" mass="54322" checksum="66E810FAF096C654" modified="2018-04-25" version="1" fragment="single">MANRLTTTAGAPVADNQNSLTAGARGPVLLQDYQLLEKLAHQNRERIPERVVHAKGWGAFGTLTITGDISAYTRAKALQPGAVTPMLARFSTVAGEQGAADAERDVRGFALKFYTEEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPATNLRSPTAMWDFWSLSPESLHQVTILMSDRGIPQAPMYMNGYGSHTYSFWNDAGERFWVKFHFKTQQGHKHYTNAQAETLIGKTRESYQEELYGGIAKGAFPRWTVQVQIMPEADADKTEYNPFDLTKVWPHGEYPPIEIGVMELNRNAENYFAEIENAAFSPSNIVPGIGHSPDKMLQARVFSYADAHRYRLGTHYEALPVNQPRVAVNHYHKDGPMRFFRNDTGNPDAYYEPNSFDGPQEDKSVLEPPLRIEGDANRYNHRIGNDDFGQPRALFNLFDAGQKARLFSNIAAAMGGVPEEIVERQCKLFDQIHAEYGAGVRAAVARAKEGAANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM4</accession>
    <name>A0A2M9PCM4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Sulfate transport system permease protein CysT</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">cysT</name>
        <name evidence="12" type="ORF">CNY89_09355</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.</text>
    </comment>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell inner membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000514">
        <property type="protein sequence ID" value="PJN95290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015419">
        <property type="term" value="F:ABC-type sulfate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011865">
        <property type="entry name" value="CysT_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005667">
        <property type="entry name" value="Sulph_transpt2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406">
        <property type="entry name" value="PTHR30406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406:SF10">
        <property type="entry name" value="PTHR30406:SF10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00969">
        <property type="entry name" value="3a0106s02"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02139">
        <property type="entry name" value="permease_CysT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0764">Sulfate transport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="66"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="112"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="144"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="196"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="221"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="250"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="68"/>
            <end position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU366001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="29758" checksum="1DA9F440DE42A7DF" modified="2018-04-25" version="1">MTAAVPARAAPVRAKRVLPGFGLSMGVTLTYVGVIVLLPVVALALKGAEIGPAGFWAILTAPRTLASLRLTLAAAGLATLATAVYGLLMAWVLTRYEFPGKRLLDGLMDIPFALPTAVAGLSLSALFSANGWYGAILEPMGIKVVYTIWGVAIAMAFTSIPFVVRTVQPILEDLDPQFEQAAKTLGAHPFTVFRRIVFPAILPAFLVGVTLSFARSLGEFGAVVFIAGNLPMETEIASLLAFIRLEEYDYAGASAIALTLLAIAMVLLLASSLLQARASRGAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR4</accession>
    <name>A0A2M9PCR4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">6-phosphogluconolactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000496">
        <property type="protein sequence ID" value="PJN95335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006148">
        <property type="entry name" value="Glc/Gal-6P_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01182">
        <property type="entry name" value="Glucosamine_iso"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glucosamine_iso" evidence="1">
        <location>
            <begin position="9"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01182"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3408" checksum="5C7B6AFD78CB3F2E" modified="2018-04-25" version="1" fragment="single">MRRVEPILPLDVLVLGMGADMHTASLFPGAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT4</accession>
    <name>A0A2M9PCT4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000487">
        <property type="protein sequence ID" value="PJN95355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018772">
        <property type="entry name" value="Transcription_activator_HlyU"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10115">
        <property type="entry name" value="HlyU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9973" checksum="A59D132D33437199" modified="2018-04-25" version="1">MSLLSRLFGGSSAPAAPEAEPVVHDGFRIFPEPMKEAGGYRIAARIEKEIDGVVKSHRMIRADTCGSADEAREVTTNKAKSLIDQQGEAIFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT8</accession>
    <name>A0A2M9PCT8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000503">
        <property type="protein sequence ID" value="PJN95322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11615" checksum="292E5BFC267FF9E1" modified="2018-04-25" version="1">MQSDVRQYRVKLAETEEERLGAQRLRYRVFVEEMGASVTPDQRAARREWDAFDPFFDHLILTSEEPVADPLDRVVGVYRLMRRAAARAASGSTARPNTTCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ9</accession>
    <name>A0A2M9PDJ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrate reductase molybdenum cofactor assembly chaperone</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">narJ</name>
        <name evidence="2" type="ORF">CNY89_07400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000374">
        <property type="protein sequence ID" value="PJN95620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051131">
        <property type="term" value="P:chaperone-mediated protein complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020945">
        <property type="entry name" value="DMSO/NO3_reduct_chaperone"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003765">
        <property type="entry name" value="NO3_reductase_chaperone_NarJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036411">
        <property type="entry name" value="TorD-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43680">
        <property type="entry name" value="PTHR43680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02613">
        <property type="entry name" value="Nitrate_red_del"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89155">
        <property type="entry name" value="SSF89155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00684">
        <property type="entry name" value="narJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="16755" checksum="081B119D2584E971" modified="2018-04-25" version="1" fragment="single">MIVTLKALSALLTYPTADLQAAAPEIGPALAREGLLPPSARKALQPLLDELATRDLMDLQERFVLLFDRSRTLSLNLFEHVHGESRERGQAMVDLLEMYRAGDCEPVGPELPDHLPILLEFLSLRPLTEARETLADAGHVIAVLGDRLERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS1</accession>
    <name>A0A2M9PDS1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TMP_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07140</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000355">
        <property type="protein sequence ID" value="PJN95664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013491">
        <property type="entry name" value="Tape_meas_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20155">
        <property type="entry name" value="TMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02675">
        <property type="entry name" value="tape_meas_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="302"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="357"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="TMP_3" evidence="2">
        <location>
            <begin position="92"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="580"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF20155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="580" mass="62701" checksum="6D5E091DCB426B0F" modified="2018-04-25" version="1" fragment="single">MIVRELLTLLGWDVDEKGADQYDRRNAKIRTDTERTINGLARTWETFGQKVDRVLAKTDAGLAKIEGTAQGVANSLGGVASMLMGGLGFAHFANVTSEFTDLHSRLKVATEGTVESADKLLDNLNQVALRTFQDVDQTVESFLQLKPGLDQLGLSTEQQTNLLQSLNDAMTVGGIKGEKAGQAMMWLGRSFTSGKVSLEAFNNLLEGSDDLIVQWSKNSGKTVEELREMAKAGKLTSRWLADHYLYTMEQMRALSEEMPVTINDAVKRVTQTMGFWIYRMDRAYGVSKKLADMFLWLADRPYIGGMIFFTGMGVAALAMAAQIVASIAAGGRAIIGMIAWLKALTRAQLAAAATNPFVWVAAAVVALQDLLVWVRGGDSVIGRLVGTLAELEATPAADRKWWQNWALGVADYTKNVDAAGAATQTLFNNASNPPPDQSWSAWFKQLGADADKALFGAGGWAEWSPFTIEEGGRTAQALEWLGAQFDRVANEASVAWETLSTKLSTELAGAWTNIQASWDGMVESVKSTWQMGVDFMIAQWDRLKAAVTDNAIARGITAAWDFVTGGTGGGTAPSAPTVPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV3</accession>
    <name>A0A2M9PDV3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Membrane fusion protein (MFP) family protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_07000</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000345">
        <property type="protein sequence ID" value="PJN95688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010129">
        <property type="entry name" value="T1SS_HlyD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01843">
        <property type="entry name" value="type_I_hlyD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="9">
        <location>
            <begin position="69"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU365093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="48766" checksum="8FEA545D056A10BF" modified="2018-04-25" version="1">MTALPPDLTPEPKDRWNIGRFLILGYATLAFMVIGFGAWGGFTSIAGAIVAHGTIEVQGNRQVVQHAKGGVIEKINVRDGDVVKAGDVLVELAGDDERSEFGIVEGQWFEILARKARLAAERDLTDKIVFAPELVERAAHDPKAAELMVAQQQQFEASAKVRDEELAQLTEREQQIEKQNVGLVAVDKATQSQLNMLSQEIKVQEDLLAKGLTQLARVLALKREFASLEGEGARAEAAIAENGGKIAETAIERVRLVSKMREEAIGELRDLEYREIELRERRAALIMQIEDLQLRAPVSGVVYGSTVDTLRGVIRAAEPIMYIVPQDAGLVVKAKVEPVNIDRVHVGQDARMRFAAFDARTTPEVDGKVLKVSADAIVEPQTQMRYYLAEISITQEARDRLGGVEILPGMPVESYIRTGDRSPLVYLTKPLTDYFAKAFREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV6</accession>
    <name>A0A2M9PDV6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NUDIX hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000328">
        <property type="protein sequence ID" value="PJN95731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3982" checksum="4AAA183009918A73" modified="2018-04-25" version="1" fragment="single">MRRYGDPVRSDRTYVNRPGAYGVIRRGSRLLLTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV7</accession>
    <name>A0A2M9PDV7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">PLDc_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_06835</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000333">
        <property type="protein sequence ID" value="PJN95719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027379">
        <property type="entry name" value="CLS_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13396">
        <property type="entry name" value="PLDc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="domain" description="PLDc_N" evidence="7">
        <location>
            <begin position="32"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="15021" checksum="FC6EA6A2BD39AA6B" modified="2018-04-25" version="1">METEIVTRGTHLGGMSFGTFLFDMIFIVIFVMWIWLAITVMLDLFRRHDVSGLAKVLWVGFIVILPYLGVFAYLLTQSGGMAERNAERMSQARDELRRVVGFSVADELTKLEALKAEGKISDAEYATLRARLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX6</accession>
    <name>A0A2M9PDX6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PNPLA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06865</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000335">
        <property type="protein sequence ID" value="PJN95714.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006629">
        <property type="term" value="P:lipid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="36"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95714.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8561" checksum="D154702490AA7F6D" modified="2018-04-25" version="1">MRGVIEVAFLEAVEAEYKRRHGPETLLCHVFDLVGGTSTGALIAAAVALGRPMAEVREFYLERARRTFSRRRLWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ1</accession>
    <name>A0A2M9PDZ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000316">
        <property type="protein sequence ID" value="PJN95761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="123"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="148"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="17825" checksum="7BA19A523226D582" modified="2018-04-25" version="1">MADGRMTDVIGRGWAAVIAGTIVGALVLALIVTLAGAIFPRKMARLGGILSGWPLRSLGAGFLAQSALVGGAIMLALTVIGLVLAPFALVASALLAFCGYVSVVYLFGVWIVTRTGALEPDTFPEHAIAGLCGAVAATLLAFIPFIGWLVLLALSFAGAGAIAIATFRPAHLPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE04</accession>
    <name>A0A2M9PE04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000314">
        <property type="protein sequence ID" value="PJN95766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014702644" evidence="2">
        <location>
            <begin position="23"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="3">
        <location>
            <begin position="66"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="33108" checksum="B88CFAB4A5A91776" modified="2018-04-25" version="1" fragment="single">MTLLRSASCLALACVLAAPALAQDRVTMVEWAGVGANWQLHSDDSYLGSRAGCYEMLTKVSQDIGVEPMLATSWTQTSPTTWDFAIREGVAFQDGTPLDAATVAGALTFLLDAPVPARNFSRKFVEKVEATGPMTVTITTKDVVANLPGRLAPPATAILSPAAYKDGAVSPIGTCTGPFEITSVDPEQGLTVVANPEYWGGAPKLAGAEVRFIPNADTRATMIRSGEAQIARMVPPYLVAQLQDDESVAIDEVEAPRIVELLLNNARPPFDDERVRQAVKLAVDTAGISAAVYEGLAPVAGGPFRAGEPWAPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE27</accession>
    <name>A0A2M9PE27_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Acyl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_06550</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000311">
        <property type="protein sequence ID" value="PJN95773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0274">FAD</keyword>
    <keyword evidence="3 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="8">
        <location>
            <begin position="167"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="7">
        <location>
            <begin position="285"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="6">
        <location>
            <begin position="399"/>
            <end position="548"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="552" mass="59723" checksum="9B01DB297D7FF1D1" modified="2018-04-25" version="1" fragment="single">PAATGIRNHDNPLHAIGFSRCPPGVRRAKPADGPEEAGVLLLVARSRPGGGHALAWVATYVESLREMRAWGVRLDAAGKFGEMERLILQIAFGEYLAQLSGGIPMSQSEMARLKDLGASAADVAALQTPAVATLIAEGNTDAARSRLVELMLLQGNSASYGATGLDDEYEMIRDQFRRFADDKVVPFAHEWHLKDELIPLEILEEMGELGVFGLTIPEEYGGFGMSKTAMCVVSEELSRGYIGVGSLGTRSEIAAELILGGGTEEQKQEWLPRIAAAEILPTAVFTEPNTGSDLGSLRTRAVKDGDDWVVTGNKTWITHAARADVMTLLVRTDPATTDYSGLSMLIAPKTRGTEEDPFPTPGMTGGEIEVLGYRGMKEYELGFDGFKVPAGNLLGGVEGQGFKQLMQTFESARIQTAARAIGVAQNALELGLRYAQDRKQFGKALIAFPRVYGKIAMMAVEIMIARQLSYYAAREKDEGRRCDLEAGMAKLLGARIAWSNADNALQIHGGNGFALEYQISRVLCDARILNIFEGAAEIQAQVIARRLLETRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE78</accession>
    <name>A0A2M9PE78_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-glucose 4-epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000281">
        <property type="protein sequence ID" value="PJN95857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="2"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="21041" checksum="1931DE13D76DA681" modified="2018-04-25" version="1" fragment="single">MARVVRDFAPEAVIHFAGLKAVGESVTDPLAYFDVNVSGTVTLLQALRASDCRRFVFSSSATVYGTPDYLPLDEVHPLRPESPYGRTKLQVEEMLGDLARSDPAWSIALLRYFNPVGSHESGRIGEDPADIPNNLMPYVTQVATGRRERLTVHGDDYDTPDGTGVRDYIHVVDLARAHLAAVGWAGTGGRGCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI0</accession>
    <name>A0A2M9PEI0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Host specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000244">
        <property type="protein sequence ID" value="PJN95960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="246" mass="25624" checksum="A4B8F4C949A4A6DD" modified="2018-04-25" version="1" fragment="single">MATLLLSAAGAALGGGLGGSIGGIASGVLGKAAGAVLGSVIDQRLTGLGAETVDAGKVERFQVMGASEGQPLPRIFGRVRVAGQVIWSSRFLDDVTTRRVGGKGGGQSQKVREHSYSISLALALCEGKVARVGRIWADGQQLDLSGVSWRLHDGSEDQTPDPLIEAIEGPEEAPAYRGVAYVVFENLSLAEFGNRIPQFNFEVFRGAPEALGDLPRPAALDIRGVALVPGTGEYALATVPIHVQRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ9</accession>
    <name>A0A2M9PEJ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05445</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000246">
        <property type="protein sequence ID" value="PJN95953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042953">
        <property type="term" value="P:lipoprotein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015854">
        <property type="entry name" value="ABC_transpr_LolD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24220:SF654">
        <property type="entry name" value="PTHR24220:SF654"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="2">
        <location>
            <begin position="12"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10199" checksum="42A04C3E7101D460" modified="2018-04-25" version="1" fragment="single">LGAVGLSARESHRPGELSGGEQQRVAFCRALANRPRLLLADEPTGNLDPETSGRVFDVLLGLVRETGMAALIATHNPELAARMDRILRLSGGRVVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM4</accession>
    <name>A0A2M9PEM4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosome-recycling factor</fullName>
            <shortName evidence="3">RRF</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Ribosome-releasing factor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">frr</name>
        <name evidence="5" type="ORF">CNY89_05315</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the RRF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000241">
        <property type="protein sequence ID" value="PJN95972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006415">
        <property type="term" value="P:translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00520">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.132.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00040">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002661">
        <property type="entry name" value="Ribosome_recyc_fac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023584">
        <property type="entry name" value="Ribosome_recyc_fac_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036191">
        <property type="entry name" value="RRF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20982">
        <property type="entry name" value="PTHR20982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01765">
        <property type="entry name" value="RRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55194">
        <property type="entry name" value="SSF55194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00496">
        <property type="entry name" value="frr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RRF" evidence="4">
        <location>
            <begin position="22"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="20723" checksum="EF09F9C511B96C8E" modified="2018-04-25" version="1">MSEIEIDVDALQKRMDGALTSLRTEFSSLRTGRASASMLEPVMVEAYGSPTPINQLGTITVPEPRLVLVNVWDKSLVNSVDKAIRNSGLGINPQMDGTILRLPIPELNEERRRELTKVAGHYAEHAKVAVRNVRRDGMDQLKKAKAAGMSEDDQKMWQDEIQELTDAAIKRIDAALDAKQEEIMQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ9</accession>
    <name>A0A2M9PEQ9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Protein-export protein SecB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">secB</name>
        <name evidence="4" type="ORF">CNY89_05040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer, a dimer of dimers. One homotetramer interacts with 1 SecA dimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the SecB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000224">
        <property type="protein sequence ID" value="PJN96018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051262">
        <property type="term" value="P:protein tetramerization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00821">
        <property type="entry name" value="SecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003708">
        <property type="entry name" value="SecB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035958">
        <property type="entry name" value="SecB-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36918">
        <property type="entry name" value="PTHR36918"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02556">
        <property type="entry name" value="SecB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01594">
        <property type="entry name" value="SECBCHAPRONE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54611">
        <property type="entry name" value="SSF54611"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00809">
        <property type="entry name" value="secB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3" id="KW-0653">Protein transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0811">Translocation</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="18358" checksum="06465F5E4C6E7922" modified="2018-04-25" version="1">MTDETNGATAPSAVPQPRMQILSQFIRDLSFENIAVQKGQLPEGKPEIKVQINLDAQPRGVDQFDVGLKVKVESTVGAAPLFILELDYAGRFAIQNVPQEQLHALLMIECPRLIFPFLRRVVSDVTRDGGYPPLNLEIIDFLQLYRSEVARRQAEAQAGDKSTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER6</accession>
    <name>A0A2M9PER6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 11">DNA-directed RNA polymerase subunit omega</fullName>
            <shortName evidence="11">RNAP omega subunit</shortName>
            <ecNumber evidence="2 11">2.7.7.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10 11">RNA polymerase omega subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9 11">Transcriptase subunit omega</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rpoZ</name>
        <name evidence="12" type="ORF">CNY89_05130</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 11">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="11">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 11">Belongs to the RNA polymerase subunit omega family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="2 11"/>
    <dbReference type="EMBL" id="PHNO01000229">
        <property type="protein sequence ID" value="PJN96002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00366">
        <property type="entry name" value="RNApol_bact_RpoZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003716">
        <property type="entry name" value="DNA-dir_RNA_pol_omega"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006110">
        <property type="entry name" value="Pol_omega/Rpo6/RPB6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036161">
        <property type="entry name" value="RPB6/omega-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34476">
        <property type="entry name" value="PTHR34476"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01192">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01409">
        <property type="entry name" value="RNA_pol_Rpb6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63562">
        <property type="entry name" value="SSF63562"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00690">
        <property type="entry name" value="rpoZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 11 12" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="6 11" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006711"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12904" checksum="4BADA98A70C3324E" modified="2018-04-25" version="1">MARVTVEDCVDKVPNRFELVMLAAHRARSLAAGTPLTIERDNDKNPVVALREIADETVTAERLRENAIESFQRQIEVDEPEEDVMTLLVGADAPIEDDMSEERLLRALMEAQGEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA4</accession>
    <name>A0A2M9PFA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VWA domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000159">
        <property type="protein sequence ID" value="PJN96235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008912">
        <property type="entry name" value="Uncharacterised_CoxE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05762">
        <property type="entry name" value="VWA_CoxE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="394" mass="45074" checksum="F05C220888D3A96C" modified="2018-04-25" version="1">MFTRFFAELRGAGIPASLREYLTFLAALDAEVVLHDAEGFYYLARASLVKDERHVDRFDRVFARVFGGLDALTPEAILERAAIPEEWLRKLAEKYLTEEERAAVEALGGFEKLMETLRERLREQEGRHQGGSKWIGTAGTSPFGAQGYNPEGVRIGQDESRHRRAVKVWDKREFRNFDDTVEIGTRNIKVALRRLRRWARDGAADELDLEGTIRATAEQGWLDLVTRPERRNAVKVLLFLDVGGSMDDHVRMVDELFSAARAEFRHFEHFYFHNCLYEGLWRENRRRWDAQVPTAEILRTYGPDYRAIFVGDAAMSPYEITHPGGANEHWNAEPGALWLARVREAWPQSIWLNPLPQGAWGHTTSVGMMAEIFEGRMYPLTLAGLEAGIRALAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH8</accession>
    <name>A0A2M9PFH8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Cell division protein FtsA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">ftsA</name>
        <name evidence="8" type="ORF">CNY89_03410</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Self-interacts. Interacts with FtsZ.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Peripheral membrane protein</topology>
            <orientation evidence="5">Cytoplasmic side</orientation>
        </subcellularLocation>
        <text evidence="5">Localizes to the Z ring in an FtsZ-dependent manner. Targeted to the membrane through a conserved C-terminal amphipathic helix.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 6">Belongs to the FtsA/MreB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000138">
        <property type="protein sequence ID" value="PJN96295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032153">
        <property type="term" value="C:cell division site"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009898">
        <property type="term" value="C:cytoplasmic side of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043093">
        <property type="term" value="P:FtsZ-dependent cytokinesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02033">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020823">
        <property type="entry name" value="Cell_div_FtsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003494">
        <property type="entry name" value="SHS2_FtsA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02491">
        <property type="entry name" value="SHS2_FTSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003101">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00842">
        <property type="entry name" value="FtsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01174">
        <property type="entry name" value="ftsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 6" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2 5 6" id="KW-0132">Cell division</keyword>
    <keyword evidence="1 5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FtsA" evidence="7">
        <location>
            <begin position="25"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR003101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="444" mass="48320" checksum="54D326E1CAED4434" modified="2018-04-25" version="1">MRRQLYEVQRAMRARRETALRRGVIAVLDIGTSKVACLVLQFVPEDGTEPQDARPTLTQGAFRVIGASNTRSRGVAYGEIASMEECERALRTAIQAAQKMAGLRVDHVIVSFSGGKPRSYGCTGEIDVFNGAVAERDIGHVLAACDIPDYGQDREAIHALPVNFCLDGRSGLTDPRGQIGKSLAVDMHLLTIAAPPLRNVLHCIRRCDLELAGIVTAPYAAGLASLVEDEQELGAACIDMGAGVTGISIFVRRQMIYADSVRMGGGHVTSDICQGLQVSMQDAERLKTMHGGLIATGLDDREMIELPSILGDWDQDRRQISRAELIGVMRPRVEEILEEVRARLDAAGFECLPSQRIVLTGGSAHIPGLELVASHILGRQVRVGKPLRVQGLPQSATGAAFSTAVGLALHVSHPQDECWDFETPGDRQGVRRIARTLRWFKEHW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK7</accession>
    <name>A0A2M9PFK7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">IENR2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003611">
        <property type="entry name" value="NUMOD3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07460">
        <property type="entry name" value="NUMOD3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IENR2" evidence="2">
        <location>
            <begin position="14"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="17"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="13330" checksum="4CE1942A51E20BA8" modified="2018-04-25" version="1">MTVSMEQVPAPRQGKPHSPETRLKMRLAKLGKKHSEEHNRRTGEGLRRWSETAEPWQKRRGWWKYLSDQEAADLSVMRRAGLSRAEALRAIDRGDLAELALASIRRLDRLSEERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK8</accession>
    <name>A0A2M9PFK8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Aminopeptidase N</fullName>
            <ecNumber evidence="4">3.4.11.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_03375</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Release of an N-terminal amino acid, Xaa-|-Yaa- from a peptide, amide or arylamide. Xaa is preferably Ala, but may be most amino acids including Pro (slow action). When a terminal hydrophobic residue is followed by a prolyl residue, the two may be released as an intact Xaa-Pro dipeptide.</text>
            <dbReference type="EC" id="3.4.11.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.2" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000136">
        <property type="protein sequence ID" value="PJN96302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004177">
        <property type="term" value="F:aminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.50.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1840">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045357">
        <property type="entry name" value="Aminopeptidase_N-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042097">
        <property type="entry name" value="Aminopeptidase_N-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038438">
        <property type="entry name" value="PepN_Ig-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001930">
        <property type="entry name" value="Peptidase_M1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014782">
        <property type="entry name" value="Peptidase_M1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012779">
        <property type="entry name" value="Peptidase_M1_pepN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024601">
        <property type="entry name" value="Peptidase_M1_pepN_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037144">
        <property type="entry name" value="Peptidase_M1_pepN_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035414">
        <property type="entry name" value="Peptidase_M1_pepN_Ig-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027268">
        <property type="entry name" value="Peptidase_M4/M1_CTD_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46322">
        <property type="entry name" value="PTHR46322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11940">
        <property type="entry name" value="DUF3458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17432">
        <property type="entry name" value="DUF3458_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01433">
        <property type="entry name" value="Peptidase_M1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17900">
        <property type="entry name" value="Peptidase_M1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00756">
        <property type="entry name" value="ALADIPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63737">
        <property type="entry name" value="SSF63737"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02414">
        <property type="entry name" value="pepN_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="15" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M1_N" evidence="14">
        <location>
            <begin position="114"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M1" evidence="11">
        <location>
            <begin position="231"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3458" evidence="12">
        <location>
            <begin position="450"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="domain" description="DUF3458_C" evidence="13">
        <location>
            <begin position="544"/>
            <end position="593"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="595"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00015611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF11940"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF17432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF17900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="595" mass="66235" checksum="4B56E24B9E884112" modified="2018-04-25" version="1" fragment="single">MRVEAEVATVRLADYRPPAHLVEAVSLTFRLTPEATRVRAEIAFVPNPDRAGEGPPDLRLDGRKLRLVSAAIDGAELPQNAVAVDAEGLTVPVELLPEGGFTWTCETEIDPAGNTALEGLYMSNGMYCTQCEPQGFRKITFYPDRPDVMAPFRVRIEADPAATPVLLSNGNLSGSGPGWAEWEDPFRKPTYLFALVAGDLKAVEDHFVTASGRDVLLQIWVRDGDQGRCAYAMDALKRSMKWDEEAYGREYDLDRFMIVAVDDFNMGAMENKGLNVFNSKFVLASPETATDVDFKSIETIIAHEYFHNWTGNRITCRDWFQLCLKEGLTVFRDQSFSADQRSAGVKRIEDVLRLRAGQFREDAGPLAHPVRPEEYVEVNNFYTATVYDKGAELVGMLRRLVGAETYGQALDLYFERHDGEAVTIEDWLKVFEDVSGRDLSQFLLWYRQAGTPRVKAETEWRDGTWRLRLSQSTPPTPGQPLKLPVPIPVAYGLLAQDGRTLAEGLLELDAAEAEFAWDLPEAPVPSLLRGFSAPVILERAATAEERAVLLAHDDDPFNRWEAGRAYALDILTALAKDPEAEIDPAWIAAMTAVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR6</accession>
    <name>A0A2M9PFR6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000108">
        <property type="protein sequence ID" value="PJN96400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6928" checksum="72E856FE211DE541" modified="2018-04-25" version="1">MRPDSHEIYARRFSRNRGVGLTLGAVVVIIFAVTIVKLTNGQSMEGFDHTFRPSLLPKIEAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY2</accession>
    <name>A0A2M9PFY2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">ATP-dependent Clp protease proteolytic subunit</fullName>
            <ecNumber evidence="5">3.4.21.92</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Endopeptidase Clp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">clpP</name>
        <name evidence="8" type="ORF">CNY89_02570</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 7">Belongs to the peptidase S14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.92" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000099">
        <property type="protein sequence ID" value="PJN96438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07017">
        <property type="entry name" value="S14_ClpP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00444">
        <property type="entry name" value="ClpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033135">
        <property type="entry name" value="ClpP_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10381">
        <property type="entry name" value="PTHR10381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00382">
        <property type="entry name" value="CLP_PROTEASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 6">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="23051" checksum="E31E369AC595F2AF" modified="2018-04-25" version="1">MKDPIETYMNLVPMVVEQTARGERAYDIFSRLLKERIIFVAGPVHDGMSTLIVAQLLFLEAENPKKEISMYINSPGGVVTSGLSIYDTMQYIRPPVSTLCCGQAASMGSLLLTAGAKGMRYSLPNSRIMVHQPSGGFQGQATDIMIHARETQALKDRLNQIYEHHTGQTFEAVEAALERDRFMTAQDAKDWGLIDEIVEKRPTEATAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ9</accession>
    <name>A0A2M9PFZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000097">
        <property type="protein sequence ID" value="PJN96442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.360.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021308">
        <property type="entry name" value="GfcB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023373">
        <property type="entry name" value="YmcC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11102">
        <property type="entry name" value="YjbF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF159270">
        <property type="entry name" value="SSF159270"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25589" checksum="AD517B1D84488651" modified="2018-04-25" version="1">MRPYVAAAFALTLAACSNGQFNPIVDAAVNEILPGERAPQGAPETPPRGPVTRAELTRADVATIRGKLPQDKRPSMFFAASDNGGYVTYSSSFRQTLTLRGTQITGSRGFGWDLLSATSSRPDPLVTPIPPGRWPASVTRSYEFHAFAPQGRIETFTCRFEYGQVREIEIMEVRHRGVEIAEICENDTRSFENLHFADVNTGFVWRSLQWLGPQQGVIDIEVVIPFTGRRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG13</accession>
    <name>A0A2M9PG13_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">EamA family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000083">
        <property type="protein sequence ID" value="PJN96490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5527" checksum="B0B8B53BFFB2A0D7" modified="2018-04-25" version="1" fragment="single">MDWRAIGLGVLFAAMWSSAFTSARMIVTDAPPFLALSLRFLLSGALALAVGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG16</accession>
    <name>A0A2M9PG16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aminoacetone oxidase family FAD-binding enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000091">
        <property type="protein sequence ID" value="PJN96462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004792">
        <property type="entry name" value="BaiN-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023166">
        <property type="entry name" value="HI0933-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42887">
        <property type="entry name" value="PTHR42887"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00275">
        <property type="entry name" value="TIGR00275"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="378" mass="39784" checksum="CEF58302F75310C7" modified="2018-04-25" version="1">MEYDAIILGAGGAGLMAAATAGQAGARVLVLDHAATPGKKILISGGGRCNFTNTGTGPESFLSENRHFAKSALSRYTQWDFLALVERHGVAWHEKTLGQLFCDGSARQIVEMLLDECRKGGVEIRLGAAIGEIDHADGRFRVAGRRARQLVIATGGPSIPKMGATGIAYDIARRFGLDVVTPRAALVPFTLGEGDRLFTSIPGVSFPTVATVRDVAFEEAALFTHRGLSGPAILQVSSFWTPGEDVSLCVLADAADKLRAARRDAPRSHLKAALGRHLPNRLAEALATRIGIVKELGNFTDADLETAAGTLTRLTFRPTGTEGFAKAEVTAGGVSTAALSSKTMEARDVPGLYAIGEAVDVTGWLGGYNFGARIVNKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD2</accession>
    <name>A0A2M9PGD2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA--3-ketoacid-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000057">
        <property type="protein sequence ID" value="PJN96600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012792">
        <property type="entry name" value="3-oxoacid_CoA-transf_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004163">
        <property type="entry name" value="CoA_transf_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02429">
        <property type="entry name" value="pcaI_scoA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01273">
        <property type="entry name" value="COA_TRANSF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="232" mass="25141" checksum="0AD62C49FDEBCEEC" modified="2018-04-25" version="1">MRKVYASATEALDGLLFDGMLIAAGGFGLCGIPENLIAAIRDDGVKDIVVASNNCGVDDFGLGILLKTRQIRKMISSYVGENAEFMRQYLSGELELEFNPQGTLAERMRAGGCGIPGFYTKTGVGTVIAEGKEHKDFDGETYILERAIVADLSIVKAWKADETGNLIFRKTARNFNPPAAMCGKVCVAEVEEIVPAGELDPDAIHLPGIYVHRLVQGAFEKRIEQRTVRTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF0</accession>
    <name>A0A2M9PGF0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000070">
        <property type="protein sequence ID" value="PJN96544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_4" evidence="1">
        <location>
            <begin position="2"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="19019" checksum="79A8EC4965DEB7AB" modified="2018-04-25" version="1" fragment="single">VYVGSLTVPLHNAWADAAIAYQKEKYPNMEMVGQRFGVAESVDETIKTTQDQLRANPDLKGILTFGSQGPIGAARVLEDREKAEDIVLVGGFSPGQGVKYVKSGTIRGGYIWNPMTAGEVFVQLSSMLAAGKEPTDGMDLPGVGPVKVFPEQKLIQAQKLESLDKENIDRLVELGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR2</accession>
    <name>A0A2M9PGR2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00775</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000024">
        <property type="protein sequence ID" value="PJN96738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="25445" checksum="62AF424CC9609528" modified="2018-04-25" version="1">MSFLIGEEMTGGYGGADILHGCTIAVDRGEIAVIVGPNGAGKSTAMKAVFGMLKLREGHVRLDGQDITGLSPQERVRAGMGFVPQVANVFTSLTVEENLEMGAYIRHDDFTATRDQIYDLFPILRQKRRQPAGELSGGQRQQVAVGRALMTRPKVLMLDEPTAGVSPIVMDELFDKIIEIARAGVSILMVEQNARQALEIADKGYVLVQGANRFTDTGAALLADPEVRRTFLGGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT4</accession>
    <name>A0A2M9PGT4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006944">
        <property type="entry name" value="Phage/GTA_portal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006427">
        <property type="entry name" value="Portal_HK97"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04860">
        <property type="entry name" value="Phage_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01537">
        <property type="entry name" value="portal_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="377"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="410" mass="44463" checksum="DF859D9C16667F91" modified="2018-04-25" version="1">MSLRNFLSSVASFFKPEAKSLANPSRQLQELFGAVPTASGISISIDTALQVPAVASAVRVISEACATLDVGMREIGADGKETVVSDHPSLAFLQGEANAWTSGFDLIRDLVIDALIRDEGGLALVSRNPDGKVIEVIRYRPGTIQVDYDPATEEPTYRSAGSQPINAANVIHLRPPFGRCPMTLAREAIGAAALMEQHAAGLFARGARPSSVLLLPKGAGEEMVKKVRAAWSASQEGFGNSGKTAVLFDGVDFKPIAFSSTDAQFLENRNFQITEIARAFRVPPSMLFQLDRATWSNTEQMGREFLIYCLEPWLRSLEAVLTRALILPEERARLRIRFDRDDLTRADLSTRATTINSLIASKTINPNEGRAWLNLEPREGGDAFENPNIATDTPPTLGASDKPEDANGPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU0</accession>
    <name>A0A2M9PGU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032494">
        <property type="entry name" value="Phage_TTP_12"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16461">
        <property type="entry name" value="Phage_TTP_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="24033" checksum="32598D178B008248" modified="2018-04-25" version="1">MAESEATIGYGTTLEIALASDPGVWTYIAETKTHNPPSFSDSPVEVTHMQSPRRMREYTPGLVEPGSSEHELNYVPGSPTDIFLESIAGKKLIARLTFTNGRQMIYSAVREGYDRELSMDGSGSGSLTLKVSGAPTLTVVAAPRNLILPTITGIPKVGAPLVLDEGIWAGAQDITYQWRKGGVAIVDATQSSYVPVTADVGEPITVTVTGANGSFSTSAVSTATANVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH29</accession>
    <name>A0A2M9PH29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000005">
        <property type="protein sequence ID" value="PJN96847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013123">
        <property type="entry name" value="SpoU_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08032">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00967">
        <property type="entry name" value="SpoU_sub_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SpoU_sub_bind" evidence="2">
        <location>
            <begin position="23"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10928" checksum="A98C7C142C0BC877" modified="2018-04-25" version="1" fragment="single">MGRKPDWAVAKERARRDEDETVWLFGLHAVRDALINPDRVRRRLIVTRNAADRLKAEIEAAGMTPEMADPRKFTAPLDPQSVHQGAALEAEPLDWGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH99</accession>
    <name>A0A2M9PH99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13740" checksum="978F2112F4E5FFDB" modified="2018-04-25" version="1">MPNKADIVRMAFSRANGANGVGDPVSGEDYDFAARVLGALVAELVVAHRITLGFDLDNTPDRYLLPLADLLSHEIAGQYEVTPQGSKTGALMRLRAVHNPYVRDMDLNDNGATSEGEITAFDRGAYF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B1</accession>
    <name>A0A2M9P4B1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004691">
        <property type="protein sequence ID" value="PJN92391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7415" checksum="9FBA9F1F2636BA7D" modified="2018-04-25" version="1" fragment="single">AADARSAAATDAQAGEKGFFEALGDFFFPDDDRITEGAAADARSAAATDAQAGEKGFFEALGDFFFPDDDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H1</accession>
    <name>A0A2M9P4H1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004487">
        <property type="protein sequence ID" value="PJN92451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1890">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007410">
        <property type="entry name" value="PCuAC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036182">
        <property type="entry name" value="PCuAC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04314">
        <property type="entry name" value="PCuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110087">
        <property type="entry name" value="SSF110087"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3739" checksum="6044FEDA0C5C511E" modified="2018-04-25" version="1" fragment="single">MTFAPGGAHVMFMGLDGDPFEVGEVIPATLVFEKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H7</accession>
    <name>A0A2M9P4H7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004581">
        <property type="protein sequence ID" value="PJN92423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5487" checksum="9A86DBDA6874FF83" modified="2018-04-25" version="1" fragment="single">AFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPIQRSAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K6</accession>
    <name>A0A2M9P4K6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH_17 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_29555</name>
        <name evidence="2" type="ORF">CNY89_29575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004482">
        <property type="protein sequence ID" value="PJN92453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01004474">
        <property type="protein sequence ID" value="PJN92455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010093">
        <property type="entry name" value="SinI_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01764">
        <property type="entry name" value="excise"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="9"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5477" checksum="7261BECF99FEA4FC" modified="2018-04-25" version="1" fragment="single">MMASPEENWLSLEETATYIGVGKTVLYGMAREGTIPARKVGKKWTFEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N5</accession>
    <name>A0A2M9P4N5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004308">
        <property type="protein sequence ID" value="PJN92506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8300" checksum="0B60DEF738F0B1A0" modified="2018-04-25" version="1" fragment="single">PRTAFASPRRTCACAARAICSASSRPACRSSASPIWRPPRPGSRSCATPRTAFASPRRTCACAARAICSASSRPACRSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N6</accession>
    <name>A0A2M9P4N6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004386">
        <property type="protein sequence ID" value="PJN92483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8115" checksum="6020812A2F987263" modified="2018-04-25" version="1" fragment="single">LVEAATEIFSAQGFVVARNAPFAGGYITQTYGLVLGDRFGAACGSWLVEAATEIFSAQGFVVARNAPFAGGYITQTYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W5</accession>
    <name>A0A2M9P4W5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004068">
        <property type="protein sequence ID" value="PJN92582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7035" checksum="FECCE6D19E96FB76" modified="2018-04-25" version="1">MDGVKVNIRFEDMPPFEIIEIVVMKTSDLSRVGFVELEREGSEQVVSVIMAFEDATCLARTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y6</accession>
    <name>A0A2M9P4Y6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003996">
        <property type="protein sequence ID" value="PJN92607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="23" mass="2864" checksum="2D7AB517C74E452E" modified="2018-04-25" version="1" fragment="single">KFPPNHLHDSWMDYLYWDAELDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z5</accession>
    <name>A0A2M9P4Z5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003969">
        <property type="protein sequence ID" value="PJN92616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="12"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="10165" checksum="65A10F07105810A0" modified="2018-04-25" version="1" fragment="single">ILCIDARHANAALKMRPVKTDRNDAAGLAQIMRTGWFKEVRIKSRDSYQVPLLLVAREMLVRIRVKIENEIRGLLRTFGVLFGKRVGGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P514</accession>
    <name>A0A2M9P514_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Enoyl-CoA hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003911">
        <property type="protein sequence ID" value="PJN92636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045004">
        <property type="entry name" value="ECH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16113">
        <property type="entry name" value="ECH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ECH_2" evidence="1">
        <location>
            <begin position="3"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6767" checksum="07F21798516EE921" modified="2018-04-25" version="1" fragment="single">MCAAGDRAFCAGGDLTEIYDAGRREDFDLPRRFWADEYRLNARIARYPKPYVALTQGHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H9</accession>
    <name>A0A2M9P5H9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Sulfate_transp domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26665</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003492">
        <property type="protein sequence ID" value="PJN92780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="63"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfate_transp" evidence="6">
        <location>
            <begin position="31"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10325" checksum="34966D53EA7F0466" modified="2018-04-25" version="1" fragment="single">VAAPLVGFIPLAALAAVLALVCWDMVEKPAIAGGFCVTGTIARTATNVRAGARSPIAGMLHAVFLLAFLMVAAPLVGFIPLAALAAVLALVCWDMVEKPAIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M1</accession>
    <name>A0A2M9P5M1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003259">
        <property type="protein sequence ID" value="PJN92854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041286">
        <property type="entry name" value="MBG_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18676">
        <property type="entry name" value="MBG_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MBG_2" evidence="1">
        <location>
            <begin position="4"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="domain" description="MBG_2" evidence="1">
        <location>
            <begin position="52"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="11460" checksum="3AC21762E1F00E64" modified="2018-04-25" version="1" fragment="single">GQDESVLTGAPSTTATRASDVGTYAIGRGTLAAQNYVLPEAEGSLTIDPVRLSLTLDDQRRAYGSANPELTWRAAGFVLGQDESVLTGAPSTTATRASDVGTYAIGRGTLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z9</accession>
    <name>A0A2M9P5Z9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Replication protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25215</name>
        <name evidence="1" type="ORF">CNY89_25230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003060">
        <property type="protein sequence ID" value="PJN92936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003055">
        <property type="protein sequence ID" value="PJN92938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6301" checksum="4F70277C85E85C43" modified="2018-04-25" version="1" fragment="single">KFREKFMTALRQVHAVYPAMKIDVTGEGLFLYTSPPPIAKTGVVVRLPKGDSGLPSGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P627</accession>
    <name>A0A2M9P627_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002931">
        <property type="protein sequence ID" value="PJN92983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="8001" checksum="6E1C2BF7F79510FA" modified="2018-04-25" version="1" fragment="single">MFFIFYSDRFPLNYLFAAFIAFMTALAISTSSLLTMAIQIFLMLYAFVFRRLTYKWPIFLFAMLIATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A1</accession>
    <name>A0A2M9P6A1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002771">
        <property type="protein sequence ID" value="PJN93045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7216" checksum="C61F7731CCD6C792" modified="2018-04-25" version="1" fragment="single">MDYRKKLIVEPGAKLRLKSLDPGWHGKHEDEKDAVEEIARHLARITTQQQLLYGEKKHALLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K4</accession>
    <name>A0A2M9P6K4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Molydop_binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23305</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002503">
        <property type="protein sequence ID" value="PJN93139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molydop_binding" evidence="2">
        <location>
            <begin position="58"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11376" checksum="C57D0E5EF28CF991" modified="2018-04-25" version="1" fragment="single">MHWSGEFASTARGRRAGSRPHRSAFGPEPALKSGSARRCAADVAAWYGFAVSRARPQALTEPFAEIHPADAEARGVGPADLVEVTSPHGRAIVRALVTDRVQPGDVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S9</accession>
    <name>A0A2M9P6S9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22635</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002339">
        <property type="protein sequence ID" value="PJN93218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9252" checksum="C806D0C5242230B0" modified="2018-04-25" version="1" fragment="single">EALAFLEAINTGHPGSISTIHADSPVLALERLALMVMRVGNRQARRDVLEYAARTIDVIVQVGRRGGRRGVLEVHLPASNLLWVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X0</accession>
    <name>A0A2M9P6X0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002189">
        <property type="protein sequence ID" value="PJN93283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16398" checksum="67DEA61A3BB6EEF9" modified="2018-04-25" version="1" fragment="single">MDVVWPDVTVSEDSLYQAVAEARRALGANGSEIIRSVPRQGYLLDATGAGAGKVRRWPAMAALALFAVICALVVWSQRRMPSGDTRHPVIAVLPFEAVTGDETWQRRGAGLSAEIATELARNDWLDVVAPEATETLAGSTLRPPAESLGARFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P723</accession>
    <name>A0A2M9P723_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002133">
        <property type="protein sequence ID" value="PJN93305.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93305.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11106" checksum="EE8BB3B8C53F6E4A" modified="2018-04-25" version="1">MDLRAPRGSDGRSGRLVSRRLRPAGLAFAPDTPERIANLSEQSGGLAAFSLFGSRRRVNRNSKDVAKLFRKRLSEEDIRRISDRAGDVWPDFYTEAEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V9</accession>
    <name>A0A2M9P7V9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AMP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001622">
        <property type="protein sequence ID" value="PJN93632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="30"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="22785" checksum="D317D2B88157D8E5" modified="2018-04-25" version="1" fragment="single">VSKDRLMDVVWPDVTVSEDSLYQAVAEARRALGTPTQLRRLLLAEGDGALPEIAHVFCGGGKLDAACCVGMAALCPNATIREFYGASETSFITIADAATPEGSVGRAYPGVLLRLDTEGRVFVASPYLFDGYAEPDLPLPPRVDGHLGTGDIGMLDAEGHLFLRGRENRMVTVADRTLFLEATPNPTCPCRRAWTAISGPATSACWTRRAICS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P811</accession>
    <name>A0A2M9P811_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001614">
        <property type="protein sequence ID" value="PJN93640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="11506" checksum="319A013FEF775B3E" modified="2018-04-25" version="1">MLQTFLERCRIAVERRRQYRSAGVTAEAMIWHHGYKGLDAALKAIEADPEDFRERVRADLVARLAADRYQRFKQADVFERALLLERWSQRRGQMIRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P822</accession>
    <name>A0A2M9P822_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001572">
        <property type="protein sequence ID" value="PJN93673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7865" checksum="F14DF35916D89148" modified="2018-04-25" version="1" fragment="single">RMPKTVMSAEQVRRRREVKKLANRMMASMSLSEAVRTAQEYASVPLFVAEERELWRQVGLEIDREAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P856</accession>
    <name>A0A2M9P856_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphatidylethanolamine--Kdo2-lipid A phosphoethanolamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18740</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001500">
        <property type="protein sequence ID" value="PJN93736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012549">
        <property type="entry name" value="EptA-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08019">
        <property type="entry name" value="EptA_B_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="EptA_B_N" evidence="2">
        <location>
            <begin position="36"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8815" checksum="CCBC912254642AB1" modified="2018-04-25" version="1" fragment="single">MALFIMAADNRTFWRRAIVIFDESALSLMMFGGAVWALTLFLLTLFGFRWLQKPVAIFVLLLSGATSYFMDALGVMID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P883</accession>
    <name>A0A2M9P883_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18635</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001488">
        <property type="protein sequence ID" value="PJN93751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005325">
        <property type="entry name" value="DUF308_memb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03729">
        <property type="entry name" value="DUF308"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="108"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="133"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18246" checksum="3E4F03B2CA6653B4" modified="2018-04-25" version="1">MTPSAPVDSSARLRQGSANLSDRPKRETRMSITVNEASAVLREAVRARIRRRSLLFLLQGGFLALAGALALVFPFFFGAGMLVMIGWLLILASLIQGAGLVGAHQAPYFWLHLVSVILGLVVGFLLVTRPEAGLLAVALLLVIYFMIDGLARVVFALTIRPMDDWEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P899</accession>
    <name>A0A2M9P899_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18545</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial PQQ dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001474">
        <property type="protein sequence ID" value="PJN93766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017511">
        <property type="entry name" value="PQQ_mDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32303:SF4">
        <property type="entry name" value="PTHR32303:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="21596" checksum="A33043E67A46D8EC" modified="2018-04-25" version="1" fragment="single">MCLCAPLHDMMALDAAGAELWRFGAGVTEVLISSDATCRGVAHFEIEGVATDAPCPGFGAERPVDQLAGFGDSAPGFVTATTPLILLRGVAVGCQLRNGQRRDAPSGVIGGYDPVIGELPWAWDRSRPEESGLPSECETWGLGKPNMWTTAIGDEALGLLYLPMGNSAIDHHGALRSDIENAFATALVDLDVETGAAVGRTPLPAGGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G3</accession>
    <name>A0A2M9P8G3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18105</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001412">
        <property type="protein sequence ID" value="PJN93837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11830" checksum="1697CBBF0B480FDB" modified="2018-04-25" version="1">MSGDSRFLGFWYVLPYVLGLLVFTAIRQRHRDHRRREVDRHLEQGFVQGPSPFAVASPTGVTGAERRRNGALGERKANAAFQSGAGALDCRPMSPFAPDEADAFADPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J7</accession>
    <name>A0A2M9P8J7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NAD(P)-bd_dom domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001390">
        <property type="protein sequence ID" value="PJN93866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="5"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18410" checksum="89CA7E7266CC9773" modified="2018-04-25" version="1">MLYGVHRKTGLPFSIVRFFNVYGPRQTPIYVVSQTVQRVLNGEAPDLYDGGAQTRCLTYIDDAIEGTILAATRPEAIGEVFNIGNGVENTMAEVVQMTLDAAGSDLEPIAVDTTEKYGAIYEDIGRRVPAVDKAERVLGWKATTSAEEGIAKTVAWARETPWYLALRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K7</accession>
    <name>A0A2M9P8K7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001386">
        <property type="protein sequence ID" value="PJN93872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6591" checksum="943D02E3762312D9" modified="2018-04-25" version="1" fragment="single">MLGVVTMLGFVWLTPNEFTHLATSSLATTVFVSNVLLYADTGYFTTAAATLPLLHTWSLAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L4</accession>
    <name>A0A2M9P8L4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001378">
        <property type="protein sequence ID" value="PJN93882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006279">
        <property type="entry name" value="SoxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038561">
        <property type="entry name" value="SoxD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04267">
        <property type="entry name" value="SoxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="11017" checksum="65AECBAD0E11423C" modified="2018-04-25" version="1" fragment="single">PYCEQDLPELEFAYAGEAHIARPLDPMSLSDEEWRDFLFIRTNPRGHHFERWRHIHGCARFFNAVRETVSDRFLLTYKAGEPRPDIATLTGEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M6</accession>
    <name>A0A2M9P8M6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17775</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001369">
        <property type="protein sequence ID" value="PJN93892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="2">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11667" checksum="A7C38DEFFF336608" modified="2018-04-25" version="1" fragment="single">PVRQWKLSPMDLESYLRWWDYTAAYDEMIRKTDTGAAPWWIVESNDKKAARINCITHLLGRIPYERIKYDEPKLGKRQKRPEDWSADTSPRNLVPSVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W9</accession>
    <name>A0A2M9P8W9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">SsrA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17185</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001290">
        <property type="protein sequence ID" value="PJN93981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd09294">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00023">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023620">
        <property type="entry name" value="SmpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000037">
        <property type="entry name" value="SsrA-bd_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020081">
        <property type="entry name" value="SsrA-bd_prot_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30308">
        <property type="entry name" value="PTHR30308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01668">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74982">
        <property type="entry name" value="SSF74982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00086">
        <property type="entry name" value="smpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01317">
        <property type="entry name" value="SSRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="101"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14659" checksum="C225A21BF3466E94" modified="2018-04-25" version="1" fragment="single">AGIMLEGSEVKSLRTGKANIGESYATVEGGELWLINGYIPAYEQAKSFGHEERRRRKLLVTKRQLARLWQGIGREGMTLVPLKLYFNEKGRAKLQLGIAKGKKLSDKRDTEKKRDWEREKARVMRARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X0</accession>
    <name>A0A2M9P8X0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001288">
        <property type="protein sequence ID" value="PJN93986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="9"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8471" checksum="39704E4D5D67AAF8" modified="2018-04-25" version="1">MSLTIGNQIKAARALAELSQAELAAAASVNVNTVRAMEGRGTGVLVSGLDTILRVQRALEAAGVEFIPENGGGAGVRLRKGPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P909</accession>
    <name>A0A2M9P909_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Exopolysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_17085</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001277">
        <property type="protein sequence ID" value="PJN94002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0270">Exopolysaccharide synthesis</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="4">
        <location>
            <begin position="16"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="23749" checksum="70B7CDE26DBFF89D" modified="2018-04-25" version="1" fragment="single">PASARARNEPLGGWPKRLLDLAFAILGLVLAAPVMLLVAILIKLVDRGPVFFAHPRVGFRGRSFRCYKFRTMDVDAEALLARHLARDPEAAREWRETQKLRRDPRVGVLGGLLRQTSLDELPQLFNILRGDMSCVGPRPVTQEELARYGTRVDCYLRARPGLTGAWQVAGRSSAGYETRVQLDAEYVHGWSLWADLGILCRTPMAVARLGEAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P918</accession>
    <name>A0A2M9P918_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16815</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001242">
        <property type="protein sequence ID" value="PJN94046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="88"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="157"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="201"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="89"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="25360" checksum="A61186392F453495" modified="2018-04-25" version="1" fragment="single">MATASTAASQQVVRTGAGARFAIYTILVLFCLYYLLPLYVMLTNSFKPLSEIQAGGMMSLPRDFTVQPWLSAWSTAQIGVAATGLRPFFLNSILMVVPAVAISTVLGALNGYVLTKWRFRGDTIIFGLLLFACFIPFQMVLIPMARMLGLMGLAGTVPGLIFVHVVYGIGFSTLYFRNYYQQFPTELIRAAMIDGAGFFTIFRRIMLPSSGPIAVVCIIWQFTNIWNDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A5</accession>
    <name>A0A2M9P9A5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Lipid kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_16435</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001191">
        <property type="protein sequence ID" value="PJN94115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="82"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="110"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="138"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17014" checksum="F0DEE7B8D8E0DEAC" modified="2018-04-25" version="1" fragment="single">MRWINRRPSRGAEIFLLCLPFVLLVAAYVIGSAVRLEANPADKLLPSPAQLWAAIERMAFLPDPRTGAYLLWSDTAASLGRLGAGLGIATAIALTLGIVIGMLPYARSLLAPFVAFVSMVPPLALLPILFIVLGLGEAAKITLIVIGVTPIMVRDLALKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G4</accession>
    <name>A0A2M9P9G4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Methylamine utilization protein MauE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_16020</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be specifically involved in the processing, transport, and/or maturation of the MADH beta-subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">One-carbon metabolism; methylamine degradation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001143">
        <property type="protein sequence ID" value="PJN94184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00895"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097573">
        <property type="term" value="F:glutathione oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030416">
        <property type="term" value="P:methylamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009908">
        <property type="entry name" value="Methylamine_util_MauE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07291">
        <property type="entry name" value="MauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="83"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="159"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="211"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="domain" description="Glutaredoxin" evidence="11">
        <location>
            <begin position="8"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="MauE" evidence="12">
        <location>
            <begin position="110"/>
            <end position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF07291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="26814" checksum="3A437F8B3B6F2341" modified="2018-04-25" version="1">MVMPDHLCPYGLKSKDLLDRHGFAVEDHHLETHDETEAFKKEHGVDTTPQTFIGSERIGGYDDLREHFGQEVKDEGETSYQPVIAIFSVAFLMALAVSWYAFGTLLSIRAFEWFIAISMCLLAVQKLQDVESFSTMFLNYDLLARRWVRYGYVYPFGEALAGILMIAGALIWVAAPVALFIGTVGAVSVFKAVYIEKRELKCACVGGSSNVPLGFVSLTENLMMMAMAIWMPLRMFWLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M0</accession>
    <name>A0A2M9P9M0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1491 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001108">
        <property type="protein sequence ID" value="PJN94233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009964">
        <property type="entry name" value="DUF1491"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07372">
        <property type="entry name" value="DUF1491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9547" checksum="AB9760AAF60AAC5F" modified="2018-04-25" version="1">MTEPRLTAGFWVSAYLTRLRLADIPVFVTARGDPTAGAVIVKLNTLDGRAEAFQRSWTLEGARVWASFAQGLEAEVSRRCNCLPHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T3</accession>
    <name>A0A2M9P9T3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001063">
        <property type="protein sequence ID" value="PJN94296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5499" checksum="CD5FCD6C907A324C" modified="2018-04-25" version="1" fragment="single">MSEHPPLLFLHGAFAGPVVWTRFIAPWFARRGHRVAVPELPGPLDQPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA62</accession>
    <name>A0A2M9PA62_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000986">
        <property type="protein sequence ID" value="PJN94428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007437">
        <property type="entry name" value="DUF486"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38482">
        <property type="entry name" value="PTHR38482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04342">
        <property type="entry name" value="DMT_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021239">
        <property type="entry name" value="UCP021239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10628" checksum="9A07E605CD65C224" modified="2018-04-25" version="1">MTFAWYGHLRFTATPLWIVVIVSWGIAFFEYCLAVPANRLGHHVYSAAQLKTIQEVVTLAIFAGFSVFWLKEPLTWNHAAGFALIALGASLIFRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC7</accession>
    <name>A0A2M9PAC7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycine/betaine ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000947">
        <property type="protein sequence ID" value="PJN94488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033265">
        <property type="term" value="F:choline binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015871">
        <property type="term" value="P:choline transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd13640">
        <property type="entry name" value="PBP2_ChoX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017783">
        <property type="entry name" value="ABC_choline_sub-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007210">
        <property type="entry name" value="ABC_Gly_betaine_transp_sub-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04069">
        <property type="entry name" value="OpuAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="OpuAC" evidence="2">
        <location>
            <begin position="1"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24245" checksum="5DA875CC63D4E5F5" modified="2018-04-25" version="1">MDVFLGQWMPTMETLIRPYLESGEIDVVRVNLEGAKYTLATTTTLADQGLTDFADIAKFKDQLDGKIYGIEPGNDGNEIIAEMIAQNAFGLGDFKLVESSEQAMLAQAERAVGDKEGIVFLGWEPHPMNMKLPMTYLSGGDAWFGPAFGGSTVSTAVRAGYVDECPNVGRLLQNLVFTPSMENQVMGAILDLNEKPEAAAANWISANPIVIGPWLEGVTARPRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE0</accession>
    <name>A0A2M9PAE0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter TctB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000943">
        <property type="protein sequence ID" value="PJN94494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4393" checksum="9D3A6131C410C546" modified="2018-04-25" version="1" fragment="single">MSAPGTHGPDKAGLAIAAGLAVLAGVIFWQTRAMPVAAQYARVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF9</accession>
    <name>A0A2M9PAF9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TIGR02281 family clan AA aspartic protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000939">
        <property type="protein sequence ID" value="PJN94501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05483">
        <property type="entry name" value="retropepsin_like_bacteria"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001969">
        <property type="entry name" value="Aspartic_peptidase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011969">
        <property type="entry name" value="Clan_AA_Asp_peptidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021109">
        <property type="entry name" value="Peptidase_aspartic_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034122">
        <property type="entry name" value="Retropepsin-like_bacterial"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50630">
        <property type="entry name" value="SSF50630"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02281">
        <property type="entry name" value="clan_AA_DTGA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00141">
        <property type="entry name" value="ASP_PROTEASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15617" checksum="5C3CEF9AC5F395EC" modified="2018-04-25" version="1">MAIIAYSYRDTIRGALFPATAVRMEGGGVELRRGADGHFQATLEVNGVPIRFIVDTGATEIVLARADAAKAGIDLDALVFSGRAMTANGPVPTARIRLDSVTLGDVTAQNLPASVTAGALQTSLLGMTYLNRFERIEISGDRMRLTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA3</accession>
    <name>A0A2M9PBA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000761">
        <property type="protein sequence ID" value="PJN94805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16193" checksum="70AA7C2FB53990EF" modified="2018-04-25" version="1" fragment="single">MAEDLVASGEVPGLAIGVVHDDEAVWLAGFGLRKAGRSETVDADTVFQLASLSKPISATVVAALVGRDVLDWGDRIADLDPGFALHDPYPSAEVTVRDLFNHRSGLPGSAGDDLEQIGFDRATVMRRLRLVPPWASFRAGYSYSNAGLTAGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA8</accession>
    <name>A0A2M9PBA8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">BCCT transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_12195</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000752">
        <property type="protein sequence ID" value="PJN94823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000060">
        <property type="entry name" value="BCCT_transptr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30047">
        <property type="entry name" value="PTHR30047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02028">
        <property type="entry name" value="BCCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="234"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="275"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="311"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="367"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="407" mass="44124" checksum="97487BD87116F7D5" modified="2018-04-25" version="1" fragment="single">MGGSSSLDSIPAPEGPTDLIKTNYEVGQDNISYRRRFVLELDIHNVVFSVSAIGIVAFTIVTLMFQTTLEPIFTGLRDFLTSTFDWFFLAAGDVFLLLCLVLIVLPLGRIRLGGPAATPDYSYVSWFSMLFAAGMGIGLMFYGVSEPLSHFSSAFGGPVVGEDGLRTDWSPLNGAAGDAEGARRLAMAATIFHWALHPWAIYAVVALSLALFAYNKGLPLTLRSIFYPIFGERVWGWPGHVIDILAVFATIFGLSTSLGIGAQQASAGLTFLFGAPATLGAIIFLIVVITAIAMASVIAGMDAGVKRLSELNMALALLLLVFIVTVGPTLQIASGFFKNLLAYGEYLPALSNPFGRDDDNFRQGWTAFYWAWWISWSPFVGMFIARVSRGRTVREFLVAVLLIPSLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD8</accession>
    <name>A0A2M9PBD8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Paraquat-inducible membrane protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000731">
        <property type="protein sequence ID" value="PJN94853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007498">
        <property type="entry name" value="PqiA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04403">
        <property type="entry name" value="PqiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="154"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="20495" checksum="5597FD8E163B0284" modified="2018-04-25" version="1" fragment="single">GLVSPAGATTCRRCGTALHSREPHSLQRVWAWWTVGLICYVPANILPMMITSTAGKTYRSNILGGVIDLAHHGAFAIAAIVFLASIVIPVSKFMVVALLAWSIQRPTRIPVHARIHLYHAVEFIGRWSMVDVFVVAILAALVQMGFFASIDPGPAAIFFALSVAFTMISAQAMDPRLIWDSAKASGSDHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF9</accession>
    <name>A0A2M9PBF9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 10">Beta sliding clamp</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_11880</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Forms a ring-shaped head-to-tail homodimer around DNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 10">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the beta sliding clamp family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000722">
        <property type="protein sequence ID" value="PJN94873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009360">
        <property type="term" value="C:DNA polymerase III complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00140">
        <property type="entry name" value="beta_clamp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001001">
        <property type="entry name" value="DNA_polIII_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022635">
        <property type="entry name" value="DNA_polIII_beta_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022637">
        <property type="entry name" value="DNA_polIII_beta_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022634">
        <property type="entry name" value="DNA_polIII_beta_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30478">
        <property type="entry name" value="PTHR30478"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00712">
        <property type="entry name" value="DNA_pol3_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02767">
        <property type="entry name" value="DNA_pol3_beta_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02768">
        <property type="entry name" value="DNA_pol3_beta_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000804">
        <property type="entry name" value="DNA_pol_III_b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00480">
        <property type="entry name" value="POL3Bc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00663">
        <property type="entry name" value="dnan"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 10" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 10" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8 10" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="6 10" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_pol3_beta" evidence="11">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_pol3_beta_2" evidence="12">
        <location>
            <begin position="134"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_pol3_beta_3" evidence="13">
        <location>
            <begin position="252"/>
            <end position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="372" mass="40682" checksum="8047182E3DAA1C73" modified="2018-04-25" version="1">MKLSMERSALLRAMSRAQSVVERRNTIPILGNVLIEAEGDQVSFRATDLDIEVVDKAPAMVRQAGATTVSAYTLHEITRKLPDGAMVEIQDDGQSGRLEVRAGRSHFSLQTLPREDFPVMASAEYQVTFACPAPVLRRLFDKAKFAISTEETRYYLNGVYMHAAKGAAGAALRCVATDGHRLARIDAALPEGASEMPGVIVPRKTVNELRKLLDDDEAKIEVSVSETKIRFATPEVALTSKVIDGTFPDYARVIPTGNTKRLEVDAAEFAQAVDRVATVSSERSRAVKMALEDDRLILSVNAPDSGAADEELAVAYADERLEIGFNAKYLQEIAGQVDRENAVFLFNSAADPTLMREGDDESAVYVVMPMRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL4</accession>
    <name>A0A2M9PBL4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Holliday junction branch migration protein RuvA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000687">
        <property type="protein sequence ID" value="PJN94936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009378">
        <property type="term" value="F:four-way junction helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013849">
        <property type="entry name" value="DNA_helicase_Holl-junc_RuvA_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01330">
        <property type="entry name" value="RuvA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuvA_N" evidence="1">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10408" checksum="EDA81650875D46E7" modified="2018-04-25" version="1" fragment="single">MIGKITGRIDHRGPDHVLVEAGGLGYIVHCSDRTLAGLPGEGEVVALYTELMVREDLMQLFGFPTLLEREWHRLLMTVQGVGAKAALAVLGTLGPDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV6</accession>
    <name>A0A2M9PBV6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Polyhydroxyalkanoate synthesis repressor PhaR</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">phaR</name>
        <name evidence="3" type="ORF">CNY89_10960</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000644">
        <property type="protein sequence ID" value="PJN95023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012909">
        <property type="entry name" value="PHA_DNA-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010134">
        <property type="entry name" value="PHA_reg_PhaR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007897">
        <property type="entry name" value="PHB_accumulat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05233">
        <property type="entry name" value="PHB_acc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07879">
        <property type="entry name" value="PHB_acc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01848">
        <property type="entry name" value="PHA_reg_PhaR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB_acc_N" evidence="2">
        <location>
            <begin position="13"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="PHB_acc" evidence="1">
        <location>
            <begin position="78"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="21926" checksum="32EC2878553B3FE0" modified="2018-04-25" version="1">MADKNENAGEPIIIKKYANRRLYNTAKSSYVTLDHLAQMVRDGQDFVVNDAKTNDDITRGVLAQIIFEEEAKEGNTMLPANFLRSLIRLYGDTLQGFVPGYLDASMETFGKNQERMREQVRQAFEANPALANFEALARTNMEWFENAMRMFAPFTATLPKGPGGKPAGKEVELESLKEQLAAMQLQLNKLVNKDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW2</accession>
    <name>A0A2M9PBW2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10885</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000638">
        <property type="protein sequence ID" value="PJN95037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="39"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="24098" checksum="EEC3215B43EC0737" modified="2018-04-25" version="1" fragment="single">MTDDVRPYSDFTGSGAGDGPRNYIIDPQDALVVDLAIKLGRPLLVEGEAGCGKSSLADAIAAELGLGDPVIVPIRSSSRSNDLFYRYDGLVRLQDRDADPEKARKAQNYITLEPVGKAIVEGQRKVILIDEIDKADMDFQNDLLFALERFEFVIDDIPASETGKVNGVAHRMRREGPAKPIIMFTSNQEKLLPKPFLRRCFYLELKFPTDPDRLEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC57</accession>
    <name>A0A2M9PC57_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Holo-[acyl-carrier-protein] synthase</fullName>
            <shortName evidence="8">Holo-ACP synthase</shortName>
            <ecNumber evidence="8">2.7.8.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">4'-phosphopantetheinyl transferase AcpS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">acpS</name>
        <name evidence="10" type="ORF">CNY89_10310</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>apo-[ACP] + CoA = adenosine 3',5'-bisphosphate + H(+) + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:12068"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9690"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29999"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:58343"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="EC" id="2.7.8.7"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the P-Pant transferase superfamily. AcpS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.7" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000590">
        <property type="protein sequence ID" value="PJN95130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008897">
        <property type="term" value="F:holo-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00101">
        <property type="entry name" value="AcpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008278">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037143">
        <property type="entry name" value="4-PPantetheinyl_Trfase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002582">
        <property type="entry name" value="ACPS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004568">
        <property type="entry name" value="Ppantetheine-prot_Trfase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01648">
        <property type="entry name" value="ACPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56214">
        <property type="entry name" value="SSF56214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00516">
        <property type="entry name" value="acpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00556">
        <property type="entry name" value="pantethn_trn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="1 8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACPS" evidence="9">
        <location>
            <begin position="21"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="25"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18905" checksum="E58BF316A43B3040" modified="2018-04-25" version="1">MDRFGPRFLDRVFTPVEQDRGLGNDLASIERIGRTIDRFGPRFLDRVFTPVEQDRAERRAERVATYAKRWAAKEACSKALGTGLRMGIAWRDMAVFNVRTGQPRMRLTGWADARLAEMTPAGFRAIIHVTLTDDHPWAFAVVVIEALPLDQPSLQFPEPEDLRPRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC76</accession>
    <name>A0A2M9PC76_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Putative Na(+)/H(+) antiporter NhaA homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_10245</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000585">
        <property type="protein sequence ID" value="PJN95139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006885">
        <property type="term" value="P:regulation of pH"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023171">
        <property type="entry name" value="Na/H_antiporter_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004670">
        <property type="entry name" value="NhaA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30341">
        <property type="entry name" value="PTHR30341"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06965">
        <property type="entry name" value="Na_H_antiport_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="99"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12937" checksum="D0BC8FC251F3A892" modified="2018-04-25" version="1" fragment="single">MRRVWKPIEEYSILLLLGAAIALVWGNLAPHEYHAFIEAPLWTGGPVGALHATPEGSERVMTLHYLINDLLMALFFALAGKEVWEATILQRGALRGSKAFAPLIATAGGMLGPVTVYLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB2</accession>
    <name>A0A2M9PCB2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HD_assoc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000569">
        <property type="protein sequence ID" value="PJN95179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026875">
        <property type="entry name" value="PHydrolase_assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13286">
        <property type="entry name" value="HD_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD_assoc" evidence="1">
        <location>
            <begin position="2"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13286"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11764" checksum="31D5BEA55D49D55E" modified="2018-04-25" version="1">MIRFSDGIFTELKEIRSFLYHRMYRHWTVQRMRRKAKRVVRELFETFLEAPELLPEGWSQCGGLDDTARARAVSDYISGMTDRFALQEHRKLTDPLVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC3</accession>
    <name>A0A2M9PCC3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000565">
        <property type="protein sequence ID" value="PJN95189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9193" checksum="CC940035A6F7C9F7" modified="2018-04-25" version="1">MGLIVPQKRETISSATLTANAERHTRDLARVVADIRASGAASLRAIAADVNYHDMLTRRGGGWHVSTVRNLLDRLGLREAACGSPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ7</accession>
    <name>A0A2M9PCJ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000523">
        <property type="protein sequence ID" value="PJN95265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014728400" evidence="1">
        <location>
            <begin position="23"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7008" checksum="FA3D5ED734649A81" modified="2018-04-25" version="1">MSRSRILLLGAALMAFAGAASAETLGEALATGRISDQAAVQLVAGSGLSFSEAQGLTVNEIAQAKWKDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT3</accession>
    <name>A0A2M9PCT3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000497">
        <property type="protein sequence ID" value="PJN95333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023157">
        <property type="entry name" value="AGR-C-984p-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010626">
        <property type="entry name" value="DUF1217"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06748">
        <property type="entry name" value="DUF1217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158837">
        <property type="entry name" value="SSF158837"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="29382" checksum="2F46123CF3083BC7" modified="2018-04-25" version="1">MAFQPQIPLAGVAGWRFLQRTGASQQAAFETGATIRRDVEYFREKIGSVTSAAELVADRRLLKVALGAFGLEGDIDKKAFVRRVLGDDLLDVKALANRLTAPAYKDMAEAFGFGGLTGAQTGKPGFADRIVAAYKTRAFESAVGEVNDDMRLALNFRREIAELSAGETGGSWYSVIGSNALRKVFEKAYGLPESFGRLDVDRQRDILRDKTATLFGASTLSAFAKPENVEKVLTRFLARSQIESGAGVTSPALTLLQNASSGSSGLYNLLASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV6</accession>
    <name>A0A2M9PCV6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chromosomal replication initiator protein DnaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000476">
        <property type="protein sequence ID" value="PJN95377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024633">
        <property type="entry name" value="DnaA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038454">
        <property type="entry name" value="DnaA_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11638">
        <property type="entry name" value="DnaA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DnaA_N" evidence="2">
        <location>
            <begin position="15"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF11638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9956" checksum="00131C9154A5B8EF" modified="2018-04-25" version="1" fragment="single">MIPARSPSGDESPTEIWDRLQAQLSSQVGRDALRNWIEPLTYLGADQGVGRFSAPTGFIGAWVSRNYGEAIRALLVQDGQPVVRLEFGVAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD09</accession>
    <name>A0A2M9PD09_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Antitoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Antitoxin component of a type II toxin-antitoxin (TA) system.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the phD/YefM antitoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000456">
        <property type="protein sequence ID" value="PJN95426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006442">
        <property type="entry name" value="Antitoxin_Phd/YefM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036165">
        <property type="entry name" value="YefM-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02604">
        <property type="entry name" value="PhdYeFM_antitox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143120">
        <property type="entry name" value="SSF143120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009981"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8959" checksum="8D74C5DBA895C966" modified="2018-04-25" version="1">MKQFSSTELANRTGDVLAAAAEAPVSIARHGKPRFVMLSTEQYDRLRRRDETRRGFHVSDLTDAEAERLIAELQASIDKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD21</accession>
    <name>A0A2M9PD21_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Cation acetate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">actP</name>
        <name evidence="10" type="ORF">CNY89_08465</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000450">
        <property type="protein sequence ID" value="PJN95441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018212">
        <property type="entry name" value="Na/solute_symporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00474">
        <property type="entry name" value="SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00813">
        <property type="entry name" value="sss"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00456">
        <property type="entry name" value="NA_SOLUT_SYMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0915">Sodium</keyword>
    <keyword evidence="7" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4" id="KW-0769">Symport</keyword>
    <keyword evidence="3 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="78"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="107"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="151"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="184"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="212"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="265"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="301"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="371"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="420"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="445"/>
            <end position="465"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="477"/>
            <end position="504"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="516"/>
            <end position="533"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="565" mass="59800" checksum="1FCB4FB1E87CEC82" modified="2018-04-25" version="1">MRFSRILPIALAATLLPLFAFGDAIQGGEVRDSVNYQAIAMFLAFVAMTMFITKWAASRTKSASDFYTAGGGITGFQNGLAIAGDYMSAASFLGISGLVFASGFDGLIYSVGWLVGWPIVLFLIAERLRNLGKFTFADVASYRLKQTPIRLLSATGTLTVVAFYLIAQMVGAGKLIELLFGLPYLYAVILVGILMIMYVTFGGMLATTWVQIIKACMLLGGASFMAFMVLRSFHFSPGELFQRATEVQPKGLAIMSPGGLVKDPISAISLGIALMFGTAGLPHILMRFFTVADAKAARKSVFYATGFIGYFYVLTFIIGFGAIVFLMDNPAFYHTITGADGTVTWDKIKGLTGGTNMAAIHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYYSVFARGRATDADVIRISKISTVCLGIVAIILGYIFENQNVAFMVGLAFAVAASVNFPVLVLSMFWSGLTTRGALIGGFLGLASAVILVILSPAVWVATFGNAEAIFPYDNPALFSVSLAFFGTWLFSVLDNSATAKAEKIAFGPQYVRSQTGLGAEGAAAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD28</accession>
    <name>A0A2M9PD28_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF485 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000450">
        <property type="protein sequence ID" value="PJN95440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007436">
        <property type="entry name" value="DUF485"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04341">
        <property type="entry name" value="DUF485"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5207" checksum="6C0E9ADC4466F1C6" modified="2018-04-25" version="1" fragment="single">LSSTGVTTIGVPIGLFVIISAFVLTGIYVAKANTTFDQMNEEILREFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA5</accession>
    <name>A0A2M9PDA5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sulfatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000424">
        <property type="protein sequence ID" value="PJN95503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="1">
        <location>
            <begin position="18"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13169" checksum="AA75FF7476A3D1F5" modified="2018-04-25" version="1">MGFGVVAEQATGFPGYNSLMSEEKATIARILTDDGYITGWWGKNHNTPAFQVSQAGPFDQWPTGMGFDCFYRFNGGDTSQWRPGPLFRNTDPTPWVLADAANPDPVGNAEWELFDLSKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB9</accession>
    <name>A0A2M9PDB9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Serine hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000406">
        <property type="protein sequence ID" value="PJN95545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase" evidence="1">
        <location>
            <begin position="27"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8501" checksum="FDE82A7314CC3598" modified="2018-04-25" version="1" fragment="single">MQDVLDTAVARGDLPFAIGLTSDGFAGGAGDAAPDRPAGPDTVLRIFSMTKAVASVAALILAERGRLDIDAPVARYLPDFDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD9</accession>
    <name>A0A2M9PDD9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Lytic transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07735</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000398">
        <property type="protein sequence ID" value="PJN95560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="3">
        <location>
            <begin position="44"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="2">
        <location>
            <begin position="9"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="17023" checksum="0A3875DB9C40DE16" modified="2018-04-25" version="1">MQFPFSCSPASPLAPPPRAEAPAPSAPVASRGLYPNETPELRALIDQYADRYDVPPELVQRVVIRESTHRPEARNGPYYGLMQILPATARAMGYEGSPHGLLDAETNLKYAVKYLRGAWLVADGDQAKAVQWYARGYYYEAKRKGLLEETGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE6</accession>
    <name>A0A2M9PDE6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ACR family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000392">
        <property type="protein sequence ID" value="PJN95575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82714">
        <property type="entry name" value="SSF82714"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="342"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="365"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="392"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="434"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="466"/>
            <end position="493"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="521"/>
            <end position="543"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="709"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="709" mass="77079" checksum="A82C547CBD3FD7F9" modified="2018-04-25" version="1" fragment="single">MIGPNLSDWSLRSRALTVYLMVIATVAGIFAFANLGRDEDPTFTIKTMLVTAVWPGATLEETQNQITDRLERRLQETTGLDALRSITRPGIATIYVDLEGAFPPERVASVWQEVRNAVGDIRHTLPQGVLGPFFNDDFGDVFGIVYGFTSDGFSERELRDYVDGVRSELLLQVDGIEKIEFIGAQDEQIFIELQPDRVAAMGLDYSQVFAAIAAQNAVRPSGVFNTGQENIILRVSGAFESEADILGVSLNAGGRMIRLGDIASVHRGFVDPPSPLFHINGKRGIGLGISMREGGDILDLGQRIRTAMTGITANLPVGIEPVLVSDQPTVVDRAIGDFTTSLYQAVGIILAVSFLTLGVRPGAVVAIAIPITLAVVFLVMQTVGIDLHRVSLGALIIALALLVDDAMTTTDAMLRRLAVGDTVDKAATFAYSRLAAPMLTGTLITIAGFVPIGFAQSQAGEYTISLFQVVAIALIASWFVAVLFTPILGGLILRPPASAEAPAPGPILRSYGRFLNLAITWRWVTIAVTVGVFALSILGLGLVKRQFFPASDRFELVVDFQLPRSSSIFATEAAVERIEGFLAERDEVDFWSSYIGRNVIRFYLPLAIQPPSDHQSQIVVMTHSVDERIALEDALDAYLVETFPEAVVRVSPLEMGPPIGWPLQWRISGPDIEVLRDEAMKLAGTIAADPRARRVHFDWIEPAREVRAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF6</accession>
    <name>A0A2M9PDF6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IMP dehydrogenase</fullName>
            <ecNumber evidence="6">1.1.1.205</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_07820</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IMPDH/GMPR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000404">
        <property type="protein sequence ID" value="PJN95548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005990">
        <property type="entry name" value="IMP_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001093">
        <property type="entry name" value="IMP_DH_GMPRt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11911">
        <property type="entry name" value="PTHR11911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00478">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0129">CBS domain</keyword>
    <keyword evidence="2 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBS" evidence="5">
        <location>
            <begin position="91"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="5">
        <location>
            <begin position="151"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24745" checksum="8ECF0FE181FB2C95" modified="2018-04-25" version="1" fragment="single">MQLREALTFDDVLLVPGASEVLPAAADTRTHVTPGIVLNIPLISAAMDTVTESRMAIAMAQAGGLGVIHRNLDVAAQAAEVSRVKRFVSGVVYAPVTLRPDQTLADAQALQERYRITGFPVIDEQGVVLGIVTNRDMRFASDPATPVRTMMTADNLAMLREPADLSEAKSLMESRRIEKLLVTDAGGRLTGLLTIKDIEQAVLNPLATKDERGRLRVAAASTVGDAGFERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK5</accession>
    <name>A0A2M9PDK5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000366">
        <property type="protein sequence ID" value="PJN95637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="1">
        <location>
            <begin position="6"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="221" mass="24160" checksum="EEDCA93C1122E370" modified="2018-04-25" version="1">MRRPGMGELRLGVIPTALAVLPQITLPFADRHPQAVLHIQSMTSARILESLENLEIDLGVSYLGEEPLGRYRGLPLYAERYALLTGPGGPFADRENLTWAEAGSAPLCQLTPDMQNRRLIDHRLREAGVEPACTLVANSLLALFAHVGTGRWSTIAPVRLSEALDWPGRLRAIPLTDPEVTHEIGLILPARDTHAPLVARFLEEAERGAIGGADRLTEPSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM0</accession>
    <name>A0A2M9PDM0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha-galactosidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000377">
        <property type="protein sequence ID" value="PJN95612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001088">
        <property type="entry name" value="Glyco_hydro_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02056">
        <property type="entry name" value="Glyco_hydro_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6025" checksum="2260FA9A95906EA6" modified="2018-04-25" version="1" fragment="single">MPHTPDITLAYIGGGSLNWAQVLMGDLAQDGAIAGEVRLYDIDQAAAARNAALGNRLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM9</accession>
    <name>A0A2M9PDM9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Molydop_binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000374">
        <property type="protein sequence ID" value="PJN95622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molydop_binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12944" checksum="F5768E4CA3410FDE" modified="2018-04-25" version="1" fragment="single">VELYNSNGALTARAVVSQRIKEGTTFMYHAQEKIVNTPGSEMTGNRGGIHNSVTRTVLKPTHMIGGYAQLSYGFNYYGTVGSNRDEFVIVRKMRKVDWLDEPATEASDATPRLEATT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE44</accession>
    <name>A0A2M9PE44_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06315</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000297">
        <property type="protein sequence ID" value="PJN95811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="124"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="124"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="23908" checksum="B3FC81E8F6977E40" modified="2018-04-25" version="1">MRILLIEDDTVLGAAVRDQIASDGQSVDWVTRLDAAGDAVRGASYDLILLDLMLPDGRGIGFLRTLRATGEVTPVIILTALDQVSDRIEGLNAGADDYLVKPFDLAELSARIGSVARRYSGNPNPIITHGPLDIDLASRSIRREGKPVQLTAREWALFEALLSRPGQILSKAQLEEKLYAFDAEVESNTIEVHVSRLRKKLGFGVIETERGMGYRLGAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI2</accession>
    <name>A0A2M9PEI2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">D-glycerate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000254">
        <property type="protein sequence ID" value="PJN95928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029753">
        <property type="entry name" value="D-isomer_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00671">
        <property type="entry name" value="D_2_HYDROXYACID_DH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-Hacid_dh_C" evidence="2">
        <location>
            <begin position="1"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="19013" checksum="3E4E952C49A676FB" modified="2018-04-25" version="1" fragment="single">IGRAVAARAKAFGLELHYHERRRARPELEEQFGLTWWESLDQMLTRIDILTIHVPHTPSTFHLLNARRLKLMKPTAYIVNTARGEVIDENAMTRMLRAGELAGAGLDVYEHGNEINPRLRELPNVLLLPHMGSATIEGRLEMGEKVIINIKTFADGHRPPDQVVPAML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES8</accession>
    <name>A0A2M9PES8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CoA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000214">
        <property type="protein sequence ID" value="PJN96043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="11"/>
            <end position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17173" checksum="7F22AD3684FA887E" modified="2018-04-25" version="1">MAPDDDALSAIFARTRTIAVVGVSKNEIRPSFYVARYLKLKGFRILPVNPAYAGETLLGETVWPDLAAIPPEAGEVHMVDVFRRSAEAGGVVDAALAHLLDRGLSTIWMQIGVTDPAAAARAEAAGVEVVMDRCPKIELQRLNGELRMGGFATGRISSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET3</accession>
    <name>A0A2M9PET3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_05025</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000223">
        <property type="protein sequence ID" value="PJN96022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040582">
        <property type="entry name" value="OB_MalK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17912">
        <property type="entry name" value="OB_MalK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="8">
        <location>
            <begin position="324"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="399"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="418" mass="45137" checksum="3AB7C84B4284FEDE" modified="2018-04-25" version="1">MGFLDIQRATKSYGAVKILHETDISVEEGEFLVLVGPSGCGKSTLLNMIAGLEEVTSGDIRIKGRSMKGVRPAERNIAMVFQSYALYPNMNVAQNMAFGLEMQGVPKAERDKAVAGVADLLQIKHLLDRKPGQLSGGQRQRVAMGRALVRHPDVFLFDEPLSNLDAKLRVDMRTEIKKLHQKLGTTIVYVTHDQIEALTLSTRIAVMFGGHVQQLGTPKEIYDNPVNIFVAGFMGSPSMNLFPAKIAFENGQAVARIALDDGSLASLPFATDRSLAAHDGRDVILGIRPEAITDQDGADRKSGAIHRLDARVTITEPAGSDTLIDIQDNGAGLPDQPSRLFEPYVTHRAKGTGLGLPIVKKIVEEHDGTLELVPAPVFEGCDHAGAWARIVLPQVAPGRGWEGGDAADTSKKLKESLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX6</accession>
    <name>A0A2M9PEX6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000204">
        <property type="protein sequence ID" value="PJN96078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8856" checksum="883E6D7E87DE28DC" modified="2018-04-25" version="1">MARGWDIRPVGQRMLSLRNAALYVGLPAKHFKGRFPYPAVDMGGGDLKYDVRDIDRWLEELKGVKVGATREEILGRLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ1</accession>
    <name>A0A2M9PEZ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protease modulator HflC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04550</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the band 7/mec-2 family. HflC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000197">
        <property type="protein sequence ID" value="PJN96098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052547">
        <property type="term" value="P:regulation of peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03405">
        <property type="entry name" value="SPFH_HflC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010200">
        <property type="entry name" value="HflC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42911">
        <property type="entry name" value="PTHR42911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB" evidence="3">
        <location>
            <begin position="20"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="186"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="23806" checksum="C3D54D066B30884C" modified="2018-04-25" version="1" fragment="single">MRRMPLLLGVLAALAFVAFNTFFIVDEREKAMVLQFGQVRAVKEEPGLGVKIPFIQNVVFYDSRIQGIDTASLEVTPLDDRRLIVDAFARWRIADVEQFRRAVGAGGMQTASQRLEAILNANVREVLGSVRSESVLSADRVGLMNRIRDQAIEEARALGVDVIDVRLKRADLPEQNLTATFERMKAERQREAADERARGNEAAQRVRAQADR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF08</accession>
    <name>A0A2M9PF08_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04420</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000190">
        <property type="protein sequence ID" value="PJN96123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="2">
        <location>
            <begin position="1"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="15648" checksum="5E393ACB26A9D781" modified="2018-04-25" version="1" fragment="single">RAGTENLIGIAGLGAAAEAAARDLNAGRWERVAEIRRILETALASAGESTILVGNQAPRLPNTICLVTPGWKGETQVMAMDLAGFAVSSGSACSSGKVRPSRTLAAMGLGEAAQGAIRISLGPDTTTDEALAFARAWTARHAKHRAKAVRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF17</accession>
    <name>A0A2M9PF17_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nucleoside diphosphate kinase</fullName>
            <shortName evidence="3">NDK</shortName>
            <shortName evidence="3">NDP kinase</shortName>
            <ecNumber evidence="3">2.7.4.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Nucleoside-2-P kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">ndk</name>
        <name evidence="6" type="ORF">CNY89_04520</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a 2'-deoxyribonucleoside 5'-diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:44640"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'-triphosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:18113"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the NDK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.6" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000195">
        <property type="protein sequence ID" value="PJN96102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004550">
        <property type="term" value="F:nucleoside diphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006241">
        <property type="term" value="P:CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006183">
        <property type="term" value="P:GTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006165">
        <property type="term" value="P:nucleoside diphosphate phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006228">
        <property type="term" value="P:UTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.141">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00451">
        <property type="entry name" value="NDP_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034907">
        <property type="entry name" value="NDK-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036850">
        <property type="entry name" value="NDK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001564">
        <property type="entry name" value="Nucleoside_diP_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00334">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01243">
        <property type="entry name" value="NUCDPKINASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00562">
        <property type="entry name" value="NDK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54919">
        <property type="entry name" value="SSF54919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0546">Nucleotide metabolism</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NDK" evidence="5">
        <location>
            <begin position="3"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="active site" description="Pros-phosphohistidine intermediate" evidence="3">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="104"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU004011"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15021" checksum="1B2B351CE6B9AF38" modified="2018-04-25" version="1">MAVQRTFSIIKPDATRRNLTGAINAKLEAAGLRIVAQKRIHLSLAQAQAFYAVHKERPFFAELTEFMSSAPIVAQVLEGEDAIAKNREVMGATNPADAAEGTVRKEFALSIGENSIHGSDGAETAAEEIAYFFSGLEIVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF83</accession>
    <name>A0A2M9PF83_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000164">
        <property type="protein sequence ID" value="PJN96215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007822">
        <property type="entry name" value="LANC-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05147">
        <property type="entry name" value="LANC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01950">
        <property type="entry name" value="LANCSUPER"/>
    </dbReference>
    <dbReference type="SMART" id="SM01260">
        <property type="entry name" value="LANC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="425" mass="43712" checksum="E93CC24B2936074F" modified="2018-04-25" version="1">MTDDPTDFLGGALSIGRRLCRDAVWSKGQCGWLGWAIEPHGGQWVSVHRALGSLFYDGSAGIGLFLARLAQSSGDPIVRATAEGALAQALSACTALETGGEYGFYSGLSGVAWACGEGGHALGHDGLVERADGIMRSAARLPPRSDRLDIVNGSAGLILALVAAARRNADEDLLASAVRHGEHLIALATRNGSSWSWDTLGTPGERHLLGLAHGASGIALALAKLGAATGRNEFLAAAKAAVAYERGHFRPAEGNWPDLRSFVQPGPTGEPPSMLAWCHGAPGIGLARLALIPLLPDEPGIRDEAETAIRTTAANLAAGGTGNFSLCHGDGGNAELLIVAAETFARPDLLKVARATAAGALHRFESSRAPWPCGVPGAGETPNLMLGTAGIGHFLLRLHDPRGVSTPLLPGAAPAGDLSPAEKEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC0</accession>
    <name>A0A2M9PFC0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000159">
        <property type="protein sequence ID" value="PJN96236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8139" checksum="DBD13D57C1D93994" modified="2018-04-25" version="1" fragment="single">TDLHRRQFADVELTHMLADAGGMQLVRKPKQFERDRDLPPATDWTGAAPPAAQAGGRGTGRNSFTPVEIRCTYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF0</accession>
    <name>A0A2M9PFF0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ATP-dependent protease ATPase subunit HslU</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Unfoldase HslU</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">hslU</name>
        <name evidence="8" type="ORF">CNY89_03685</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the ClpX chaperone family. HslU subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000154">
        <property type="protein sequence ID" value="PJN96249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009376">
        <property type="term" value="C:HslUV protease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036402">
        <property type="term" value="F:proteasome-activating activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043335">
        <property type="term" value="P:protein unfolding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00249">
        <property type="entry name" value="HslU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004491">
        <property type="entry name" value="HslU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48102:SF3">
        <property type="entry name" value="PTHR48102:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00390">
        <property type="entry name" value="hslU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 5" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="6">
        <location>
            <begin position="49"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="ClpB_D2-small" evidence="7">
        <location>
            <begin position="326"/>
            <end position="415"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="60"/>
            <end position="65"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="312"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="384"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00249"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="434" mass="48207" checksum="C451BED620DA4A61" modified="2018-04-25" version="1">MTELTPREIVSELDRFIIGQSEAKRAVAVALRNRWRRKQLAPELREEVYPKNILMIGPTGVGKTEISRRLAKLAKAPFLKVEATKFTEVGYVGRDVEQIIRDLVDAAIVMTREDQREKVKARAHSAAEERVIDALAGEGARDQTRDMFRKKLRDGSLDDKEIELEVADTASPFPMMDIPGQQPGMGAMNLGDIFGKAFGGRKVRRRMTVSASYELLIAEEADKLLDNETVTREAIEAVEQNGIVFLDEIDKVCARAETRGADVSREGVQRDLLPLIEGTTVSTKHGPVKTDHVLFIASGAFHIAKPSDLLPELQGRLPIRVELRALTEADFVRILTETDNALTLQYTALMATEKVEVAFTPEGIAALAAIAAEVNRTVENIGARRLYTVLERVFEELSFTAPDRSGDRVQVDAAFVEKHLGELSRSTDLSRYVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ9</accession>
    <name>A0A2M9PFJ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000128">
        <property type="protein sequence ID" value="PJN96327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="135"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="344" mass="37062" checksum="39EF58E9899A6306" modified="2018-04-25" version="1" fragment="single">MRFAVIGSLGWAGSRHVEALAEMGQDIVALVDPGAGCVEQAAAIGAKAVASFDDLDLDTIDAATLALPPSLHPELTRRLARAGKHVMCEKPMAPDSAEALALVEFAKSVPVTIMPGYLLRTNPHIRGFLDALRGMGQLRRVHLSTNVRKPSMAGWRSEPVIGGALLVNAIHQIDLATWFVGETLTPRFAQLDNVHFEAPTEDLFFTSLASPSGVTATILSSWSPRPPICDDGLMITDAGRLRIEAETDEGSIILTGTGYRRNGEDVALPGVVGVNQFVKELEHFIDAIETGAPLWVTVEDNWKVQKLIEDCGADQRPVGIGLGHGEGDLERLGIDRLHRRHVGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ1</accession>
    <name>A0A2M9PFQ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000115">
        <property type="protein sequence ID" value="PJN96371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13278" checksum="C5E49114088C7D34" modified="2018-04-25" version="1">MLKHRGFPGRLKGTDHQFTIRRADPKGVTPLKARERFRDRKAPDREADAGFLAALIDAFGEEPFERGNLDAGRLNWLLDREVVPAEEPFDPTSYEALLRVDLARARQSFPELFLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ5</accession>
    <name>A0A2M9PFQ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000110">
        <property type="protein sequence ID" value="PJN96390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="14890" checksum="84B1E1CA41110285" modified="2018-04-25" version="1">MLTERQIEKSTIGLWAAGGLAFLLVSQAVGLTLYLSGIKGSVAAVDAKIEAVQSNQVAGQQRAEQRQAATESRIDEVVEVSRDRNNALDARIRPLETQAAATTATLQSINNNLLQLGADMRELGRAMRESDKAEDKKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS4</accession>
    <name>A0A2M9PFS4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Virulence protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000109">
        <property type="protein sequence ID" value="PJN96396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009744">
        <property type="entry name" value="VirC1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07015">
        <property type="entry name" value="VirC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="232" mass="24844" checksum="05ABB3F18A4FE754" modified="2018-04-25" version="1">MEIVSFVSFKGGAGKTTALQLLCSALLARGRKVALIESDENAPLGQWRKNARREGTWDEGCAIHPGGAPQLLLESIVAAEQSGVEVLLIDTQGGGSELNNAAIVNSSLVIVPTAITAADIPRCIDTLAFLDELRSTESLEDKLLIAILVTRFPLNLNKSRQESLDKLADFPLFETILRERDALAGLEDTGMLHLSVVKRAAISPILATHFRSALTEGGQFADEVASVLEVQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU2</accession>
    <name>A0A2M9PFU2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RHH_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002145">
        <property type="entry name" value="CopG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01402">
        <property type="entry name" value="RHH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RHH_1" evidence="1">
        <location>
            <begin position="52"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10020" checksum="0A84E1A888C9ABA1" modified="2018-04-25" version="1">MTSDGRINLVLPVQDYARLCAMARRQRTTVSSLVRMAVLSAAPRPYKGERHRVSVRLPSDAAEAVEGKARASGMTPTGFLRAAVQGLLERQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY7</accession>
    <name>A0A2M9PFY7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Porin_4 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02495</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000095">
        <property type="protein sequence ID" value="PJN96448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015288">
        <property type="term" value="F:porin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033900">
        <property type="entry name" value="Gram_neg_porin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023614">
        <property type="entry name" value="Porin_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13609">
        <property type="entry name" value="Porin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014702645" description="Porin_4 domain-containing protein" evidence="2">
        <location>
            <begin position="34"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="domain" description="Porin_4" evidence="3">
        <location>
            <begin position="18"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="410" mass="42256" checksum="BAD17BF95A5F9747" modified="2018-04-25" version="1">MGLKTKFMRNAMKKILFATTALATLAVGGAASAEIVLFGNARLGLGYNINNDGTVNRPSDTDTSSKDNKKTTVDVDVVDPVTGEVTTVEEEIVTEVGSTEDFRAVSRIRFGVTMTGETESGITFGASIRADNASGGGTGASAVTGQTDGDVFVSGSWGTLTFGDTNAADEQHVGDAGGNLSLTNLGDLNETAYISNGGGFGDDRINFASNPSARPTVRYDYNFAGFGVSVSTDRSLSDVGVGGSYTYEFASGSVTGGVGYYDFSEFNTVVNVTGETVRVKGGEQWSAGLTGTFSGFSGGVVYTAASSESASEFASGDLDVLNVGLGYELDAWSFAAWYANVLTGNGAFGVYDGEQTYGLTVAYDLGGGASVNMGVAQSYGRDAYGTPGADNYIAGVEDATIADFGIKMEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG03</accession>
    <name>A0A2M9PG03_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH_17 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000090">
        <property type="protein sequence ID" value="PJN96468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="2">
        <location>
            <begin position="4"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12359" checksum="B0145E0F998AA32A" modified="2018-04-25" version="1">MTNLLTVEEAAAALHETVKVAAIRAAIREGRLTATKIGRRYYVDERVLRRFAACPDRASRPASGSAPTTEPGSSSTGASSIGQAIAEKAAAELLKMRSKSTLPRAGRKAAAGPRSPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG36</accession>
    <name>A0A2M9PG36_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000086">
        <property type="protein sequence ID" value="PJN96479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="427" mass="47451" checksum="CCB43E8F4702E35F" modified="2018-04-25" version="1">MQIGEFVLRLHPETRIEVHHRPEGAVAVVGDAYGQYDRSLAEIVARMPWDDPWPALGELGGRHAILLLSGARMRAAHDPFGSRTLYYAPGLRAVASHVGLLARPYGIEPDPQVAEYMAMPEYQVRTVSYLPGDLTTATGVYGLAPNNYWDGERTHRYWPRAPLTATTREDFYGEMDRYFAAFVPFVRSRYTPVFGVTGGIDSRAAFAAFGGDFRGTSWTNHLPPAERPIIDRIVAHLGVDHGYLRTKKFERGPVARAAGVCNGGVRPGNLLSEAMAATYGPGHCFIRGLGGEVLRGFPAYDNRLPDLSPRSMTNAYSSGKRRCGRSPAYVACCARAFEGFRARANYDGLEAFGIRPMDLFYWEHRMAMWGANMMNEMDPGCYSLIAFNSRPLYAAAFGLPDDQRLSKELLATYARRHDAAMAEIEYI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG60</accession>
    <name>A0A2M9PG60_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000072">
        <property type="protein sequence ID" value="PJN96535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="15050" checksum="D1521E0BC3DB51E1" modified="2018-04-25" version="1">MPLYTEEEMSAAITDALMGCASPSYHGTLRRMSPADTKRYGDYLLHEREHKKRSDLKRIREFVAVFKAMALMTRGFCPAAIEQAVADAEMEREAYRDGGSEFSERLAADLMIIKSLFVYSDDYAIHLASEQGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF1</accession>
    <name>A0A2M9PGF1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Trk system potassium uptake protein TrkA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_01535</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000055">
        <property type="protein sequence ID" value="PJN96611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015079">
        <property type="term" value="F:potassium ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006036">
        <property type="entry name" value="K_uptake_TrkA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003148">
        <property type="entry name" value="RCK_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02254">
        <property type="entry name" value="TrkA_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00335">
        <property type="entry name" value="KUPTAKETRKA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51201">
        <property type="entry name" value="RCK_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-0520">NAD</keyword>
    <keyword evidence="3" id="KW-0630">Potassium</keyword>
    <keyword evidence="2" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="RCK N-terminal" evidence="6">
        <location>
            <begin position="2"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="146"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="domain" description="RCK N-terminal" evidence="6">
        <location>
            <begin position="237"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="374"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00017378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="460" mass="49212" checksum="7190F1422E6CBAC9" modified="2018-04-25" version="1">MKIIICGAGQVGGQIARHLAREEGANRVTVVDVNAGLIRRITESFDVGGVTGFASHPEVLERAGARDADMVIAATQSDEVNMVVCQVAHSLFEVPKKIARLRSHAYLTAYYSDLYRTDALPIDVVISPEYAVADAVIQRLTAPAAFDIGGFLEGGAQLVGIALDAACAALNTPLRQLSELFSTLRVTVVGVRRAERLFVPDPGDQLYDGDQVYLLCATPDVARVMEVFGKTNIEIGRALVVGGGNIGLNVAQKLEADPRRIRLKVIERNRARAEEVADSLKRTVVLNGDGLDLDLLEEANVSTLDAVLALTDDDKTNILACVRAKAEGAKMAVALVNDPSLIGLIAPMGIDAYVNPRSTTVSSILRYVRHGRVRSVYAIGDGEAEVIEAQVLSTSALAGKTVRETDIPKSALIGLIRKGDKVIAPRGDTRINEGDVVTIFAMAESVAEVEQLFQAGLDFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF5</accession>
    <name>A0A2M9PGF5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="8">7.6.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">potA</name>
        <name evidence="10" type="ORF">CNY89_01830</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.11" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000067">
        <property type="protein sequence ID" value="PJN96554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015417">
        <property type="term" value="F:ABC-type polyamine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005893">
        <property type="entry name" value="Sp_pt_ABC_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01187">
        <property type="entry name" value="potA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-1278">Translocase</keyword>
    <keyword evidence="1 8" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="22"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="54"/>
            <end position="61"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="379" mass="42152" checksum="67DE4D1B803A1417" modified="2018-04-25" version="1">MNQSVPVATAKPWVTGEVPPFVRISRITKKFGDFTAVNNVSLDIYKGEIFCLLGGSGCGKSTLLRMLAGFESPTEGTIEIDGQDMTGIPPYERPTNMMFQSYALFPHMSVEKNVAYGLRREGVARGEALERAGQMLQMVQLGPYASRKPHQLSGGQRQRVALARALVKRPKLLLLDEPLGALDKKLREETQFELIKIQETLGVTFIVVTHDQEEAMTLSTRIGVMNAGEIAQVGEPTQIYEHPESRFVADFIGSVTIFEGRVSEDEPEYIRIDCPEIGGTIHVGHGVTCTLDQKVWYAIRPEKMRLTRERPEGAFNLFSAVVEDIGYLGDISVYRLRLPTGKLVSATVANVSRHPDDVITWDEKVWVSWEDNGGVVLTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH6</accession>
    <name>A0A2M9PGH6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Corrinoid adenosyltransferase</fullName>
            <ecNumber evidence="4">2.5.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Cob(II)alamin adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Cob(II)yrinic acid a,c-diamide adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Cobinamide/cobalamin adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_01740</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 cob(II)alamin + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)alamin + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:28671"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>2 ATP + 2 cob(II)yrinate a,c diamide + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)yrinate a,c-diamide + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:11528"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="ChEBI" id="CHEBI:58503"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 2/7.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the Cob(I)alamin adenosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000063">
        <property type="protein sequence ID" value="PJN96574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016030">
        <property type="entry name" value="CblAdoTrfase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036451">
        <property type="entry name" value="CblAdoTrfase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029499">
        <property type="entry name" value="PduO-typ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12213">
        <property type="entry name" value="PTHR12213"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01923">
        <property type="entry name" value="Cob_adeno_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89028">
        <property type="entry name" value="SSF89028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00636">
        <property type="entry name" value="PduO_Nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Cob_adeno_trans" evidence="5">
        <location>
            <begin position="7"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU366026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01923"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="20650" checksum="BEE0591B3E817A39" modified="2018-04-25" version="1">MVVLNRIYTRTGDAGQTALGNGARVAKHAPRVEAYGTVDETNATLGLARLHAEGEIDEGLARVQNDLFDLGADLCTPDLENDATAKYPRLRIVAAQVLRLEAEIDAMNARLEPLRSFILPGGSALAAHLHLARTVCRRAERGTVALSEMEAVNPEAVKYLNRLSDWLFVIGRIANDEGRADVLWVPGANR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL9</accession>
    <name>A0A2M9PGL9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01150</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000039">
        <property type="protein sequence ID" value="PJN96676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="8"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14478" checksum="2A8E305AABC22508" modified="2018-04-25" version="1" fragment="single">MNGTLKPCVAIIDDEADMRESVAQWLSLSGFEPMRFEAAESALKELASDFPGVIVSDIKMPGMDGMALLRRIQSIDPGLPVILMTGHGDVPMAVEAMRIGAFDFVEKPFEPDRLAELVGRASDARARTLETRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS4</accession>
    <name>A0A2M9PGS4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000021">
        <property type="protein sequence ID" value="PJN96755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7993" checksum="86858701F82273D0" modified="2018-04-25" version="1" fragment="single">MNEQTNLEPRTRYLRQKNAYATYGADEPRPDFTRSYYAPKGGLPGQNELLTGRAVFTESYAFIPRGVMTD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV6</accession>
    <name>A0A2M9PGV6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 10">Acyl carrier protein</fullName>
            <shortName evidence="8">ACP</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">acpP</name>
        <name evidence="12" type="ORF">CNY89_00505</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 10">Carrier of the growing fatty acid chain in fatty acid biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="7">Glycolipid biosynthesis; KDO(2)-lipid A biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8 10">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="8">4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by AcpS. This modification is essential for activity because fatty acids are bound in thioester linkage to the sulfhydryl of the prosthetic group.</text>
    </comment>
    <comment type="PTM">
        <text evidence="10">4'-phosphopantetheine is transferred from CoA to a specific serine of apo-ACP by acpS.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the acyl carrier protein (ACP) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="UniPathway" id="UPA00360"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000036">
        <property type="term" value="F:acyl carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036104">
        <property type="term" value="P:Kdo2-lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01217">
        <property type="entry name" value="Acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003231">
        <property type="entry name" value="Acyl_carrier"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20863">
        <property type="entry name" value="PTHR20863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00517">
        <property type="entry name" value="acyl_carrier"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="4 8" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2 8" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="1 8 9" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="3 8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="11">
        <location>
            <begin position="2"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="8 9">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8409" checksum="8F10F5DC94036FF3" modified="2018-04-25" version="1">MSDIAERVKKIVVEHLSVDEAKVTESASFIDDLGADSLDTVELVMAFEEEFGIEIPDDAAETIQTYGDAVKFIEANS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH16</accession>
    <name>A0A2M9PH16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1,4-alpha-glucan branching enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glgB</name>
        <name evidence="2" type="ORF">CNY89_00560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000017">
        <property type="protein sequence ID" value="PJN96774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003844">
        <property type="term" value="F:1,4-alpha-glucan branching enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043169">
        <property type="term" value="F:cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006048">
        <property type="entry name" value="A-amylase/branching_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037439">
        <property type="entry name" value="Branching_enzy"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006407">
        <property type="entry name" value="GlgB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43651">
        <property type="entry name" value="PTHR43651"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02806">
        <property type="entry name" value="Alpha-amylase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01515">
        <property type="entry name" value="branching_enzym"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-amylase_C" evidence="1">
        <location>
            <begin position="302"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="395" mass="44202" checksum="825EF0C5793FBE3B" modified="2018-04-25" version="1" fragment="single">AHRAGVGVILDWVPAHFPVDEHGLAWFDGTALYEHADPRQGFHPDWNTAIYNFGRKEVFAFLVNNALYWSEKFHIDGLRVDAVASMLYLDYSRKAGEWIPNAQGGRENLEAVAFLQATNKAVYGSHPGTVTIAEESTSWPKVSAPVHEGGLGFGFKWNMGWMHDTLTYIGRDPIHRGHHHNDLTFGLLYAFSENFVLPLSHDEVVHGKGTLLARIPGDAWQKFATLRAYFAFMWGYPGKKLLFMGQEFAQGAEWSEARQLDWWQRDIPEHRGVSDLVRDANHLYRARTALHARDCEPEGFEWLIADDSANSVFAWLRRAPGANPIAVVTNFTPVPRTGYRVPLPLPGRWREVLNSDAFQYGGGGMGNMGGVVADETGATITVPPLATVWLEHAPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH22</accession>
    <name>A0A2M9PH22_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nucleotid_trans domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000006">
        <property type="protein sequence ID" value="PJN96840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005069">
        <property type="entry name" value="Nucl-diP-sugar_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03407">
        <property type="entry name" value="Nucleotid_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nucleotid_trans" evidence="1">
        <location>
            <begin position="93"/>
            <end position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="253" mass="27820" checksum="B1474D77E4BB48D4" modified="2018-04-25" version="1">MTAPFRVITCADADYFHFLPFLEANVERKFGALPLIYDLGLTPEQKASLRSEILQVPVPAGYKDYGADHGFIMTTHKPACIADALNRSPGGCLYVDADVLFVGPVSVSDLGGADVAVTPRHPTERTPKHLENGTLNAGVLFFASRPAARRLIDDWAEACAEGTRTDQMALSDLLADFALLERLGLETQDGLSVMKLDARLFNDVRLKTGRVLHFKNAGRNPRITAKLVRYRRLERHAPHALAALFALRRTLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH52</accession>
    <name>A0A2M9PH52_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF3799 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011604">
        <property type="entry name" value="PDDEXK-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024432">
        <property type="entry name" value="Put_RecE_PDDEXK-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12684">
        <property type="entry name" value="DUF3799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3799" evidence="2">
        <location>
            <begin position="51"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="287"/>
            <end position="450"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="304"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="373"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="450" mass="49841" checksum="3904211EB1E6809F" modified="2018-04-25" version="1">MNAPNRPAGAIYGLSSADYHGDTLAPRPSLSSTLARKLFLSPLHAWTASPRLNPDWQPEEKTEFDFGRAAHRAVLGRGDDYAAIPEELLSKDGAASTKAAREWIEEQRAAGVTPLKADAMAMIEAMAEKCRDRLALVGIKLNPERSELAAIGERDDCAIRCMADNAPRNSPWLIDFKTARDASPDGAIRAVTTLGYDLQAAHYEDTWEAATGERRRMLFVFQEKAPPFEVGIYELHEGDDEADWMTNARDKARQARRIWADCLRRNEWPGFPAAIGVLGAPSYHSAKWEGRAKPPTKFWPTPRRGRPPPEKQHEPARPDHRPRPRQGPDRHRRPPRGAGAAGHRAGVSPLAGPRRRRRHDPQGVSGQAADDHGGDPQGRRGRPCPDAGAGEHRRDQRPPDDLGRRDPRASHAFRPPCGRGDHRRGRGPDRHRDPDAGRHRPEGGAVLLHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH61</accession>
    <name>A0A2M9PH61_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000008">
        <property type="protein sequence ID" value="PJN96824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8833" checksum="1D1367A2F36CAFA3" modified="2018-04-25" version="1">MPSSSAIVIPGSGAWHPALTGPGTWLVTGNDNFDYCWAEGAPSPALPGHFRLARIDLVVRLLSGEQLYVRAQRPMTLTATAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P454</accession>
    <name>A0A2M9P454_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_30690</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004892">
        <property type="protein sequence ID" value="PJN92326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7795" checksum="C39D2DB73AD824B7" modified="2018-04-25" version="1" fragment="single">AEEDVLAYMTFPSQHRVKLHSTNPLERLNKEVKRRADVVGIFPNEDSIVRLIGAVLLEQNDEWQLQH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P496</accession>
    <name>A0A2M9P496_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004754">
        <property type="protein sequence ID" value="PJN92366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="21" mass="2315" checksum="8D38CE0475382FE5" modified="2018-04-25" version="1" fragment="single">PLQNIDWTTPQGGDGPNYPNM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E2</accession>
    <name>A0A2M9P4E2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004696">
        <property type="protein sequence ID" value="PJN92388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001360">
        <property type="entry name" value="Glyco_hydro_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00232">
        <property type="entry name" value="Glyco_hydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7859" checksum="405E9ED8FE965645" modified="2018-04-25" version="1" fragment="single">IGNWFADYAAVVADRLGDRLHATATINEPWCVGWRNRDIGNWFADYAAVVADRLGDRLHATATINEPWCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F2</accession>
    <name>A0A2M9P4F2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004672">
        <property type="protein sequence ID" value="PJN92398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="8535" checksum="A56A3F2B273D7DD0" modified="2018-04-25" version="1" fragment="single">SLFHAEQQAIIERKHAREREAMALRFRHELRHESRELRRGYDEGRANQLTVYLTQRAALKVSQDRRHAALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L4</accession>
    <name>A0A2M9P4L4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Biotin carboxylation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_29320</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004387">
        <property type="protein sequence ID" value="PJN92482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="4">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN92482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="7841" checksum="85D91CF931D4B820" modified="2018-04-25" version="1" fragment="single">AVIAACKATGAEAVHPGYGFLSENIGFAEALAAEGIAFIGPRPEHLAVIAACKATGAEAVHPGYGFLSENIGFAEALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P4</accession>
    <name>A0A2M9P4P4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004221">
        <property type="protein sequence ID" value="PJN92531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9482" checksum="6A01C9E8B0FA7259" modified="2018-04-25" version="1" fragment="single">AALEAIHDAVQLRSNERAILITEDDRVLRQALVFQPELTDRMIPITTRDFLEGLEQAQRIQSVEAVYRRAEDAGRHASQRQAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R7</accession>
    <name>A0A2M9P4R7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004258">
        <property type="protein sequence ID" value="PJN92519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8827" checksum="745D2D5937C42E90" modified="2018-04-25" version="1" fragment="single">GSSPARCRSAIPQGRVLRWFGTCTDIHDYKATEREKARDRGAADAGASTGSSPARCRSAIPQGRVLRWFGTCTDIHDYKAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V4</accession>
    <name>A0A2M9P4V4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004092">
        <property type="protein sequence ID" value="PJN92577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036856">
        <property type="entry name" value="Ald_Oxase/Xan_DH_a/b_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54665">
        <property type="entry name" value="SSF54665"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9319" checksum="1C6C4FD61949F8DD" modified="2018-04-25" version="1" fragment="single">GKIAGTTPFGMDVHLPNHLVAVVIRPPRLRATLKAAAEFRIIGNPESRRRDTAGKIAGTTPFGMDVHLPNHLVAVVIRPPRLRATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W3</accession>
    <name>A0A2M9P4W3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004024">
        <property type="protein sequence ID" value="PJN92594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9537" checksum="D98FB83BB16CECA3" modified="2018-04-25" version="1" fragment="single">RLLVAAPDGRSFVPGPLASELPIGTGNMAGFLDMLRTAGLQPPVTYRIPEDYPDVHTLARHVQPILPFVQWVYARISAGHRLTRGGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y9</accession>
    <name>A0A2M9P4Y9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004090">
        <property type="protein sequence ID" value="PJN92578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9639" checksum="8E0D6C1EC6C7A60B" modified="2018-04-25" version="1" fragment="single">DPANRVSYNTREGGYLWVPGLGPNDANEEIQGHFGNIADFDLMMEAVEAVQADGTYDWASSDFFREIDEEFLSERDNEVQTGLPHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P517</accession>
    <name>A0A2M9P517_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003920">
        <property type="protein sequence ID" value="PJN92632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9988" checksum="F92E5E37E5D4C84E" modified="2018-04-25" version="1" fragment="single">FAQEMPGRGFVMSFTDVTRERIAIHSMLRANVTLEARVTERTEALAEALADAERANSFAQEMPGRGFVMSFTDVTRERIAIHSMLRANV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C7</accession>
    <name>A0A2M9P5C7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003667">
        <property type="protein sequence ID" value="PJN92723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10821" checksum="E63703B256B89E1D" modified="2018-04-25" version="1" fragment="single">LVFLGIAWRSLAVLVNNGADGAVFSIALMIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D3</accession>
    <name>A0A2M9P5D3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26805</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003543">
        <property type="protein sequence ID" value="PJN92764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11115" checksum="F358585E751249C7" modified="2018-04-25" version="1" fragment="single">AVYPVVIFDALRVKIRDKDSRIVKNKAVYLALGDHGRRASARSWGSGSPRTRGAKFWLSVMTELRNRGVQDILIAVVDGLKGFPEAITAAFPQTMVQTCVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J0</accession>
    <name>A0A2M9P5J0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HNH_5 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22280</name>
        <name evidence="2" type="ORF">CNY89_26455</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003437">
        <property type="protein sequence ID" value="PJN92799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002253">
        <property type="protein sequence ID" value="PJN93256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029471">
        <property type="entry name" value="HNH_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14279">
        <property type="entry name" value="HNH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH_5" evidence="1">
        <location>
            <begin position="53"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10519" checksum="1A9825A93A1D7E17" modified="2018-04-25" version="1" fragment="single">MFLDAECNVFGHICPVFFAAEIATETEEIRRIGRKNLKFAKMMRIVRRDDYRCQHCNKKLQDNEIEFDHIIPVSKGGSSEEHNIRLTCFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T0</accession>
    <name>A0A2M9P5T0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_24860</name>
        <name evidence="3" type="ORF">CNY89_25560</name>
        <name evidence="2" type="ORF">CNY89_25740</name>
        <name evidence="1" type="ORF">CNY89_26300</name>
    </gene>
    <organism evidence="2 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003393">
        <property type="protein sequence ID" value="PJN92815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003201">
        <property type="protein sequence ID" value="PJN92875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003146">
        <property type="protein sequence ID" value="PJN92897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002950">
        <property type="protein sequence ID" value="PJN92975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7277" checksum="00B8E3B7AF34EF79" modified="2018-04-25" version="1" fragment="single">MDIKGHLQNNWAVGTGLYVNTSDGFTIRDSDMTDFKIAMNIWGTDDVTIEGNSIRRMNHDGLFLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P611</accession>
    <name>A0A2M9P611_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002956">
        <property type="protein sequence ID" value="PJN92972.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014864140" evidence="1">
        <location>
            <begin position="26"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92972.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11114" checksum="0E49C999E1BF7D13" modified="2018-04-25" version="1" fragment="single">MTPKPILRVAIAALVFTAAAGAVQAAGGSLVCKDSFKTLKEIRAEVGGSPAFINIVNQYVTRWDAQEARRLCEDYAAGRPVTITCLDGQRDWTAIKASIPEEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F0</accession>
    <name>A0A2M9P6F0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002641">
        <property type="protein sequence ID" value="PJN93090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8415" checksum="C54050A3D3431BC2" modified="2018-04-25" version="1" fragment="single">MDKRTSRYIEQWKLSDLQPLTRTFTSDLYKAQSKQGAVVLKVLTDAGAKDEKAAADVLELWGGRGAVQVWHHDEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G3</accession>
    <name>A0A2M9P6G3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23345</name>
        <name evidence="1" type="ORF">CNY89_25975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003282">
        <property type="protein sequence ID" value="PJN92848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002512">
        <property type="protein sequence ID" value="PJN93136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4729" checksum="0D27648925BA12F8" modified="2018-04-25" version="1" fragment="single">LKLAKTSGFKKARIAVARKMAVILHAMWKTNTPFRWSQEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H6</accession>
    <name>A0A2M9P6H6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_23635</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002592">
        <property type="protein sequence ID" value="PJN93109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="9110" checksum="DF5EC26805E9BEA5" modified="2018-04-25" version="1" fragment="single">FSPEIRRVIYTTNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I8</accession>
    <name>A0A2M9P6I8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002407">
        <property type="protein sequence ID" value="PJN93181.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93181.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="15297" checksum="59B8C15A29E0A387" modified="2018-04-25" version="1" fragment="single">ERARLNGKTLNLDRLNNYSFRHTLANWLRDYVPEGYISALLGHSVMVTVNDRWRMHETAATVTKQNYFDSHPESREVARHRRMLANLYAIRDAMDEHFWPEVQKHCQFDLRLGQDGRSTTEADSPIKLVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L9</accession>
    <name>A0A2M9P6L9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002413">
        <property type="protein sequence ID" value="PJN93177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10941" checksum="0CF7D1C67461EC4A" modified="2018-04-25" version="1" fragment="single">MATIRVSSETEFTKALLTANGGDTILLKAGTYSDLDIKDNRQNDLDFSSTVTIRSEDPNNRAVINELFVQGASNIKISDVVLDYTGRQASDTESWLRGSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P706</accession>
    <name>A0A2M9P706_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002169">
        <property type="protein sequence ID" value="PJN93288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="66"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12165" checksum="0EC003C6B0F91AD3" modified="2018-04-25" version="1" fragment="single">MKKTYYSNGQWQVTDEFVRARGRSIQISTLESFDVSRKLFFLCLGIGGGFAAFGLIYADLLYTREIVGFVGFGVALLFLSWNVATLTIFSKLTGHKGWAITGWAPSLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P722</accession>
    <name>A0A2M9P722_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00355</name>
        <name evidence="1" type="ORF">CNY89_21805</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002123">
        <property type="protein sequence ID" value="PJN93310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000010">
        <property type="protein sequence ID" value="PJN96812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5156" checksum="3AA5455D7EE1A740" modified="2018-04-25" version="1" fragment="single">MTDEMMTLRGLVEKTPDADLLREMIGFAAERLMELEVGGLTGAAWGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P727</accession>
    <name>A0A2M9P727_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21570</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002067">
        <property type="protein sequence ID" value="PJN93342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01007">
        <property type="entry name" value="TRANSPOSASE_MUTATOR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14817" checksum="16E1C2D32DBD11F5" modified="2018-04-25" version="1" fragment="single">MTDAVLDEVKEWRSRALDAVYPVVIFDALRVKIRDKDSRIVKNKAVYLALGITGDGEREVLGALDRRERGGQILALGDDRAAQPRSQDILIAVVDGLKGFPEAITAAFPQTMVQTCVVHLVRHSLNFCSWKDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P738</accession>
    <name>A0A2M9P738_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DDE_Tnp_IS66 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002033">
        <property type="protein sequence ID" value="PJN93361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="2">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="108"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="19000" checksum="8F3B2FD1AF665FCB" modified="2018-04-25" version="1" fragment="single">IAGLYAVEKAVRGHSPDARLAARRQLSAPIVAAMKPWLEKQLSQLSSGSKLAEHIRYTLGAWGRPDPLPRRRASRAGHQLHRESHPSGGSDAQEQPLRRPRDRRRALGAARLPRRHLQAQRRRARRLSDGNSRRHHQRPPDEAHRRPHALALPASVNRRHVGPRPSAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P749</accession>
    <name>A0A2M9P749_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_20190</name>
        <name evidence="4" type="ORF">CNY89_21315</name>
        <name evidence="3" type="ORF">CNY89_22005</name>
        <name evidence="2" type="ORF">CNY89_28700</name>
        <name evidence="1" type="ORF">CNY89_28780</name>
    </gene>
    <organism evidence="4 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004181">
        <property type="protein sequence ID" value="PJN92544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01004156">
        <property type="protein sequence ID" value="PJN92554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002173">
        <property type="protein sequence ID" value="PJN93286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002020">
        <property type="protein sequence ID" value="PJN93371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001779">
        <property type="protein sequence ID" value="PJN93522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5267" checksum="66E1DA8B587FC3F4" modified="2018-04-25" version="1">MCLLERFKHIRNPAGYLSHLTRQAEQGSFSLAVLLQATRASSHQIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P771</accession>
    <name>A0A2M9P771_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GTPase Era</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002051">
        <property type="protein sequence ID" value="PJN93355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005662">
        <property type="entry name" value="GTP-bd_Era"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42698">
        <property type="entry name" value="PTHR42698"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18712" checksum="7EBDA33FA22E9EA9" modified="2018-04-25" version="1" fragment="single">RGRDADVVVLLIEAHRGITDGVRAILENLATQMPRGRNVALAINKIDRVKAEALLALSAEMNEIRDFAATFMISAERGHGTDALKSWLAEQVPPGPWLYPEDQIADLPLRLLAAETTREKLTLRLHQELPYELTVETEAWEERKDGSVKIDQVIYVARDGHKGITLGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B8</accession>
    <name>A0A2M9P7B8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_20910</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001928">
        <property type="protein sequence ID" value="PJN93423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044772">
        <property type="entry name" value="NO3_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23515">
        <property type="entry name" value="PTHR23515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="34"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="8">
        <location>
            <begin position="1"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="18872" checksum="730491228348C313" modified="2018-04-25" version="1" fragment="single">LSTIAFTACFAVWMIFSIIGLSIREQLGLSQSEFGLLVAMPVLSGSLTRLVLGIWTEQYGGRLVFTAQMLLTAGAVWLLTYAHTYPMFLLAALGVGLAGGSFAIGVAYVSRWFPKDSQGTALGVFGMGNVGAAVTKFLAPFVMVAYGWEAVAHVWAIGLAIMAIVFFVFAKDDPTFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D4</accession>
    <name>A0A2M9P7D4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Damage-inducible protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001885">
        <property type="protein sequence ID" value="PJN93447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041635">
        <property type="entry name" value="Type_ISP_LLaBIII_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18135">
        <property type="entry name" value="Type_ISP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Type_ISP_C" evidence="1">
        <location>
            <begin position="8"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF18135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="181" mass="20663" checksum="BB6B2330EBDB0E7B" modified="2018-04-25" version="1" fragment="single">IVIEGSWRQNGNLAMMCDNIHALMPDGGCQCFPLYLYEQQEEEPGGLFEDQTSGLQRRDAITDFGLKHFSGRYPGETITKEDLFYYVYGLLNSEDYRTEYADSLSKELPRIPRVKTADDFWAFSRAGRALGDLHVHYEAVDPYPVTIKQGDLRTAVIKDPEAFYRVTKMKFGGKRGEVDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R6</accession>
    <name>A0A2M9P7R6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001677">
        <property type="protein sequence ID" value="PJN93591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="15959" checksum="6AAD8BAC7036E794" modified="2018-04-25" version="1" fragment="single">PLPGDLKEAVPPRQGDSGVGDLRDDQVMGSPFSCVDLEDRSPAWRQRHSGARTSSAPPTAPEAVKHIAEILDTKQAINGLATRKVEVAPLVADIGVWMRRALAACPARQGHGLHAPAQELVHKLARERNGLTATAWLEARNGRASPSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P815</accession>
    <name>A0A2M9P815_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001570">
        <property type="protein sequence ID" value="PJN93675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="19"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6533" checksum="E019CAE65D027722" modified="2018-04-25" version="1" fragment="single">MGQIKLTNVQKSYGAVDVLHDVNLVIEDGEFVVFVGPSGCGKSTLLRSIAGLERVTSGAIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P817</accession>
    <name>A0A2M9P817_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001549">
        <property type="protein sequence ID" value="PJN93696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="24851" checksum="23161962344EEE5D" modified="2018-04-25" version="1" fragment="single">PKAHLFSHVPVFLSATTVDEMRAIAVAVETTAQLAAYKAAVLSWAPEIARADHGPLGALMGYDFHLGEDGPRLIEINTNAGGAFLNAFLARAQRACCAEMDIPATSQSFEDAVIGMFQEEWLRQRGTGAPKCIAIVDDGPLEQYLYPEFVLARQVMAARGIDAVIADAGHLRYDDGHLSVGGKKIDLVYNRVTDFAFKQPQHKALQEAYRDGAVVVTPNPHNHALLADK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P825</accession>
    <name>A0A2M9P825_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001560">
        <property type="protein sequence ID" value="PJN93685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8072" checksum="7A8959CD0D7FE2BA" modified="2018-04-25" version="1" fragment="single">SDPRHFADPSSRELWGLVEVMDAAAAAAPEVGSGHEAMVRVASDPRHFADPSSRELWGLVEVMDAAAAAAPEVGSRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G4</accession>
    <name>A0A2M9P8G4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001413">
        <property type="protein sequence ID" value="PJN93835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11256" checksum="2D059F407A8F3A4A" modified="2018-04-25" version="1">MLIYFLESTARAMAEITGGSPFYIRNRIREALAEASLGAAATPELATLHPFVQDPNRGRMGAFGDLAIALRFDPARPERILELSADTPAGAGGYHDRLVLVLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M1</accession>
    <name>A0A2M9P8M1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17885</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001385">
        <property type="protein sequence ID" value="PJN93874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007236">
        <property type="entry name" value="SlyX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04102">
        <property type="entry name" value="SlyX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7260" checksum="E8F1DF4EE263588A" modified="2018-04-25" version="1" fragment="single">MTETERRLTQLEMALAHAEAEAQTLSEVVRDQGSRLDLLARQTAALARRLAELEESAAVPGAVEADV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N8</accession>
    <name>A0A2M9P8N8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L36</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpmJ</name>
        <name evidence="7" type="ORF">CNY89_17580</name>
        <name evidence="6" type="ORF">CNY89_17735</name>
    </gene>
    <organism evidence="6 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4 5">Belongs to the bacterial ribosomal protein bL36 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001366">
        <property type="protein sequence ID" value="PJN93898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001343">
        <property type="protein sequence ID" value="PJN93916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00251">
        <property type="entry name" value="Ribosomal_L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000473">
        <property type="entry name" value="Ribosomal_L36"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035977">
        <property type="entry name" value="Ribosomal_L36_sp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00444">
        <property type="entry name" value="Ribosomal_L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57840">
        <property type="entry name" value="SSF57840"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01022">
        <property type="entry name" value="rpmJ_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00828">
        <property type="entry name" value="RIBOSOMAL_L36"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007645"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="41" mass="5025" checksum="DA427DC2E0C40DFE" modified="2018-04-25" version="1">MKVVNSLRSLKQRHRDCRVVRRKGRVYVINKTQRRFKARQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S6</accession>
    <name>A0A2M9P8S6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17405</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001319">
        <property type="protein sequence ID" value="PJN93945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="3">
        <location>
            <begin position="20"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="23862" checksum="212490BF396695D4" modified="2018-04-25" version="1">MRFRHDRTRRSGGAGRLTPDGRRRQIVDGAIDYFPEIGFDGGARNLAARLGVTQPLLYRYAPAKEGLIRAVSEHLYVGSWKEEWSETIGDAGLPLRDRLVRFYLSYTEVIFDPRWIRSSLFTGLKGLEISRWWMALVEQNVMRRLCGEIRRQEGLPGFDEIPLTAAEAEAFWTLHGGIFYYGVRREAFVAQSVDCLLAALLAAARAALPVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T0</accession>
    <name>A0A2M9P8T0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001323">
        <property type="protein sequence ID" value="PJN93940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038109">
        <property type="entry name" value="DNA_bind_recomb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011109">
        <property type="entry name" value="DNA_bind_recombinase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07508">
        <property type="entry name" value="Recombinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Recombinase" evidence="1">
        <location>
            <begin position="5"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="24056" checksum="F189A6CE3EF75037" modified="2018-04-25" version="1" fragment="single">DKGYLYRVLVNRVYRGDAVHKGKAYPGEHQAIIDEQLWDQVHAILRQNPRKRANNTRAQAPALLKGLIFTATGAAMTPSSTKKGARRYRYYVSMDVIKNREPSDAGIPRRLPADLVEAAVVTELRRVMRAPSITAQVIAHLAREGHAFAEADVISALQTFDDVWGQLFPAEQTRIVQLLVRRVTVTSEGLVIDVRTDGVSGVMRDMMAPRKKVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P912</accession>
    <name>A0A2M9P912_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16900</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001253">
        <property type="protein sequence ID" value="PJN94036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014786713" evidence="1">
        <location>
            <begin position="19"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="31"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="286" mass="31234" checksum="6B1BCCE07AD4B1C7" modified="2018-04-25" version="1" fragment="single">MRLAAFLIALTLATPALAQDKLTLILDWFVNPDHGPIVIAEEKGFFAEQGLEVEVIAPADPSDPPKMAAAGKADIAVSYQPQLHLQVQEGLPLIRVGTLVATPLNCLLVLEDGPVKSVADLKGRKIGFSVAGVEEALLGAILGRHGLTLDDVELVNVNWSLSPAVMAGQVDAVIGAYRNFELNQMEIEGRPGRCFFVEEEGVPPYDELIYVANPQTMDRAKLARFLAATEKATQYMVNHPQESWEIFAATAPELQDELNARAWVDTLPRFALRPAALDHGRYARFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P923</accession>
    <name>A0A2M9P923_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001240">
        <property type="protein sequence ID" value="PJN94048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10530" checksum="01FCC20490CA6115" modified="2018-04-25" version="1">MNTKRRLVSNYVRTFIEKEGGSIRFRAVRDERGRLYWEVLGVYPDGTEEAVTSSNTGQYKVLRTADAVVAYWSSLYPKERYLHLPVIPGASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P931</accession>
    <name>A0A2M9P931_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001235">
        <property type="protein sequence ID" value="PJN94056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="294"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31016" checksum="6EC384648E6656EC" modified="2018-04-25" version="1" fragment="single">MILRGYGYLSLIVGSLAATGYTIAAAQFCRPSPWIFVPCFQKMREIARFGGWVSATALLNNLYLMLPNLVLPRLAGFEAVALFNRATQLSQLSERVIVGAVTPVILPAFATLSRKGGDLRQGYLQGVRLVTVVQWPALLGIAILAEPVVRIVLGDQWDAAADLLRILALAGLFMAPAALTFPILVSCGHARDTLTASLVSLSIGAVIFAIAAPFGLRVLALSFFVTLPVQMAVALAFIRRRLGFGWVEFARACAPSAGCALMSAVPPLLVAAHGGFAFSLPLAQLVLAVVGSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P986</accession>
    <name>A0A2M9P986_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Elongation factor 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">lepA</name>
        <name evidence="4" type="ORF">CNY89_16500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001200">
        <property type="protein sequence ID" value="PJN94106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00071">
        <property type="entry name" value="LepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006297">
        <property type="entry name" value="EF-4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43512">
        <property type="entry name" value="PTHR43512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01393">
        <property type="entry name" value="lepA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="3">
        <location>
            <begin position="1"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="344" mass="37604" checksum="5097E98351D3B24A" modified="2018-04-25" version="1" fragment="single">IQSTGTVAARDMQAQLLDSMDIERERGITIKAQTVRIDYKAQDGQTYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDASQGVEAQTLANVYQAIDAGHEIVPVLNKIDLPAAEPDRVIEQIEDVIGIEAHDAIRISAKTGLGIEGVLEAIVTRLPPPKGDPDAPLKAMLVDSWYDAYLGVVVLVRIIDGKLRKGDRIRMMSTNALYPVERIGVFRPGMTPVDELGPGEIGFLTASIKQVRDTRVGDTITTERKGVTEALPGFKPAQPVVFCGLFPVDASDFENLREAIEKLQLNDASFSSEMETSAALGFGFRCGFLGLLHLEVIRDRLEREYDLDLITTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B1</accession>
    <name>A0A2M9P9B1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001193">
        <property type="protein sequence ID" value="PJN94112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011703">
        <property type="entry name" value="ATPase_AAA-3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07726">
        <property type="entry name" value="AAA_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_3" evidence="1">
        <location>
            <begin position="37"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11276" checksum="763AA2A53D6B03B4" modified="2018-04-25" version="1" fragment="single">MAPRDAMIALRAAMNAEVLGQPRVVERMVIGLLADGHLLIEGLPGLAKTRAVKAMARHLAADFSRVQFTPDLLPSDVTGTDIYYSEAGKGAFRFQPGPVFGNILL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J3</accession>
    <name>A0A2M9P9J3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">NAD(+) diphosphatase</fullName>
            <ecNumber evidence="2">3.6.1.22</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_15835</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the Nudix hydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.22" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001121">
        <property type="protein sequence ID" value="PJN94214.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000210">
        <property type="term" value="F:NAD+ diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015376">
        <property type="entry name" value="Znr_NADH_PPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09297">
        <property type="entry name" value="zf-NADH-PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="8">
        <location>
            <begin position="38"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94214.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="19387" checksum="6FBBF387DC81E37A" modified="2018-04-25" version="1" fragment="single">IFAWHASHGFCAACGAASDLAEAGWKRVCPACGAQHFPRTDPVVIMLILRGDEVLLGRSPAWPPGMYSLLAGFMEPGESIEAAVRRETLEETGVRVGRVDYLSSQPWPFPSSLMLGCRGEALSRDIVLDPAEIEDARWVDKQAALDGMIGLTPELRPARKGSIARFLIERWLADRLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q8</accession>
    <name>A0A2M9P9Q8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Potassium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15635</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001096">
        <property type="protein sequence ID" value="PJN94249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006812">
        <property type="term" value="P:cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="5">
        <location>
            <begin position="14"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="7995" checksum="C3218306B6545AB5" modified="2018-04-25" version="1" fragment="single">MAEPTGGSDLVSVVILLGAAVVAVPLFRRLGLGSVLGYLAAGLVIGPFGLGLFSDPAAILHAAELGVVMFLFIIGLEME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ7</accession>
    <name>A0A2M9PAQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1223 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000864">
        <property type="protein sequence ID" value="PJN94627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010634">
        <property type="entry name" value="DUF1223"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36057">
        <property type="entry name" value="PTHR36057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06764">
        <property type="entry name" value="DUF1223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014980785" evidence="1">
        <location>
            <begin position="22"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="234" mass="25320" checksum="ED2AC3B38C7B4F30" modified="2018-04-25" version="1">MRILQPLLVVASLAFPGLAAAQRAPQVVVELFTSQGCVSCPPADAVFHRIAARPEVLALALHVDYWDYLGWKDIFGQPAHSRRQRAYAATEGKRSIYTPQMIIGGVDRVVGSDLEEVEKGLDAHLALPQRAMVDLVRDGDKVRLRVAPADVNGAGASDIHVVRYVPEAVVTIDSGENAGQVITYTNIVTDWLTIARWDGVTAAELTFEAPGTEPVAVLVQREHNGPMLTAARLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV9</accession>
    <name>A0A2M9PAV9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Guanylate kinase</fullName>
            <ecNumber evidence="2 9">2.7.4.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">GMP kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gmk</name>
        <name evidence="11" type="ORF">CNY89_13065</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Essential for recycling GMP and indirectly, cGMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + GMP = ADP + GDP</text>
            <dbReference type="Rhea" id="RHEA:20780"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58115"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.8"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the guanylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.8" evidence="2 9"/>
    <dbReference type="EMBL" id="PHNO01000833">
        <property type="protein sequence ID" value="PJN94680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004385">
        <property type="term" value="F:guanylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00328">
        <property type="entry name" value="Guanylate_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008145">
        <property type="entry name" value="GK/Ca_channel_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008144">
        <property type="entry name" value="Guanylate_kin-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017665">
        <property type="entry name" value="Guanylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020590">
        <property type="entry name" value="Guanylate_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00625">
        <property type="entry name" value="Guanylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00072">
        <property type="entry name" value="GuKc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03263">
        <property type="entry name" value="guanyl_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00856">
        <property type="entry name" value="GUANYLATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50052">
        <property type="entry name" value="GUANYLATE_KINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9 11" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Guanylate kinase-like" evidence="10">
        <location>
            <begin position="19"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="26"/>
            <end position="33"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00030128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="25412" checksum="D30D7D795AF91127" modified="2018-04-25" version="1">MSSDRPAGPAGDARHARRGLLIILSSPSGAGKSTLSQRLLAADLEVRFSVSATTRAPRPGEQDGREYHFRERAAFEAMIERGEMLEYAEVFGNLYGTPRAPVGAAIDDGHDVLFDVDWQGGQQIRNSPLRDAVVSIFILPPTMAALEARLHGRGQDAPEVVARRMEKSRDEISHWAEYDYVLINEDLERCEADLRSIIRAERLKRDRQTGLMGFVTGLNREFEERHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB17</accession>
    <name>A0A2M9PB17_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Flagellar motor stator protein MotA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">motA</name>
        <name evidence="12" type="ORF">CNY89_12825</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MotA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000811">
        <property type="protein sequence ID" value="PJN94719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097588">
        <property type="term" value="P:archaeal or bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000540">
        <property type="entry name" value="Flag_MotA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022522">
        <property type="entry name" value="Flagellar_motor_stator_MotA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002898">
        <property type="entry name" value="MotA_ExbB_proton_chnl"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30433:SF4">
        <property type="entry name" value="PTHR30433:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01618">
        <property type="entry name" value="MotA_ExbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03818">
        <property type="entry name" value="MotA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01307">
        <property type="entry name" value="MOTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="12" id="KW-0966">Cell projection</keyword>
    <keyword evidence="12" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0283">Flagellar rotation</keyword>
    <keyword evidence="12" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="5"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="198"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="MotA_ExbB" evidence="11">
        <location>
            <begin position="135"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008038"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN94719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="290" mass="30895" checksum="E0147F8134833771" modified="2018-04-25" version="1">MIGIAGIVIVFVMVFGGYVVAGGKLGIILHAAPFEMMMIAGAAVGAFVISNDMHGIKHTLKDVGKVFKGPHWKPQDYQDLLCLMFQLIRLARQSPAELDQHIEDPGASAIFGAYPRILADGEAVALICDTLRSASMNYDDPHQVEEVLGKRIEANHQAALHSAHALQTMADGLPALGIVAAVLGVIKTMASIDQPPEILGKMIGGALVGTFLGVFLAYGFVGPFAAKVKSVIDEDQHFYALIREVMVAALHQHAPNICVEVGRQNAPSGVRPTYNALEEALRASRQGIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI1</accession>
    <name>A0A2M9PBI1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000710">
        <property type="protein sequence ID" value="PJN94888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5550" checksum="0B3E8D2F6AAAEC8D" modified="2018-04-25" version="1" fragment="single">MRLGLDFGGTKIEGVVLDASGAERARARVPTPRHDYDGCLRAIHGLMLDLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ2</accession>
    <name>A0A2M9PBJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tol-Pal system protein TolB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tolB</name>
        <name evidence="2" type="ORF">CNY89_11660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000703">
        <property type="protein sequence ID" value="PJN94907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011659">
        <property type="entry name" value="PD40"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07676">
        <property type="entry name" value="PD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="21009" checksum="1571EEAC186E55E0" modified="2018-04-25" version="1" fragment="single">HDDGRDAGRGPGRAGLPDRLQPAQHVPPLLRGGASNIFLADLGSGSARQLTQGSQIDASPSFSPDGGQIVYESDQGGVQQIYVMGASGGGSRRISFGEGRYATPAWSPRGDLIAFTKMNGGRFHIGVMRPDGSGEKLLTSSYLDEGPTWAANGRVIMFYRETPGDSGGPQIYTVDITGRNLRRTPTAGYASAPSWSGLLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM7</accession>
    <name>A0A2M9PBM7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000688">
        <property type="protein sequence ID" value="PJN94932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH" evidence="1">
        <location>
            <begin position="5"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="43" mass="4938" checksum="4439A94E470301D2" modified="2018-04-25" version="1" fragment="single">KLQDNEIEFDHIIPVSKGGSSEEHNIRLTCFGCNRDKSDNYMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP5</accession>
    <name>A0A2M9PBP5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Molecular chaperone DnaK</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dnaK</name>
        <name evidence="6" type="ORF">CNY89_11325</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the heat shock protein 70 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000674">
        <property type="protein sequence ID" value="PJN94958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.34.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018181">
        <property type="entry name" value="Heat_shock_70_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029048">
        <property type="entry name" value="HSP70_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029047">
        <property type="entry name" value="HSP70_peptide-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013126">
        <property type="entry name" value="Hsp_70_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19375">
        <property type="entry name" value="PTHR19375"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00012">
        <property type="entry name" value="HSP70"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100920">
        <property type="entry name" value="SSF100920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100934">
        <property type="entry name" value="SSF100934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01036">
        <property type="entry name" value="HSP70_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="369"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="286"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="413" mass="45107" checksum="36024DA28956B38C" modified="2018-04-25" version="1" fragment="single">DMRIVQYLADEFKKEHGVDLTKDKMALQRLKEAAEKAKIELSSASQTEINQPFISMDPKTHQPLHLVLKLTRAKLESLVAELILRTMKPCAQAIKDAGVSKDQIDEVVLVGGMTRMPKVIEEVQKFFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVVLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQIFSTAEDNQNAVTIRVFQGEREMAADNKILGQFNLEQIPPAPRGVPQIEVTFDIDANGIVSVSAKDKGTNREQKITIQASGGLSDSDIDKMIKEAEENAEADKARRELVEARNQAESLIHGTEKSVKDHGDKVDPTTIEVIEMSIKNLKEAMEKDDPEKIRARSQDLTEAAMKLGEAIYKAQSEEASKSSDGGDQGPGGSAGDDIVDADFEDLGDNKRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ3</accession>
    <name>A0A2M9PBQ3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Alkyl hydroperoxide reductase C</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Peroxiredoxin</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Thioredoxin peroxidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_11360</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peroxiredoxin family. Prx6 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000677">
        <property type="protein sequence ID" value="PJN94952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008379">
        <property type="term" value="F:thioredoxin peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03016">
        <property type="entry name" value="PRX_1cys"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000866">
        <property type="entry name" value="AhpC/TSA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024706">
        <property type="entry name" value="Peroxiredoxin_AhpC-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019479">
        <property type="entry name" value="Peroxiredoxin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045020">
        <property type="entry name" value="PRX_1cys"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10417">
        <property type="entry name" value="1-cysPrx_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00578">
        <property type="entry name" value="AhpC-TSA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000239">
        <property type="entry name" value="AHPC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0049">Antioxidant</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3 11" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="10">
        <location>
            <begin position="3"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="active site" description="Cysteine sulfenic acid (-SOH) intermediate" evidence="9">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00017462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00032824"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000239-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="23638" checksum="190D8AB5DCE4BDD2" modified="2018-04-25" version="1">MSLRINDLAPDFEAETTEGPIRFHDWIGDGYAILFSHPKDFTPVCTTELGAMAGVAGEFAARGAKILGISVDPVESHHKWKADIAQATGHAVGYPMIGDTDLNVAKLYDMLPAATPGTSEGRTPADNATVRTVFVVGPDKRIKLALTYPMTTGRNFDEILRALDSIQLTAKHKVATPANWKQGEDVIVTAAVSDEEAEARFGGFTRVLPYLRTTAQPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR0</accession>
    <name>A0A2M9PBR0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lytic murein transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11240</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000668">
        <property type="protein sequence ID" value="PJN94973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.101.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043426">
        <property type="entry name" value="MltB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011970">
        <property type="entry name" value="MltB_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002477">
        <property type="entry name" value="Peptidoglycan-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036365">
        <property type="entry name" value="PGBD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036366">
        <property type="entry name" value="PGBDSf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031304">
        <property type="entry name" value="SLT_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30163">
        <property type="entry name" value="PTHR30163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01471">
        <property type="entry name" value="PG_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13406">
        <property type="entry name" value="SLT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47090">
        <property type="entry name" value="SSF47090"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02283">
        <property type="entry name" value="MltB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT_2" evidence="2">
        <location>
            <begin position="19"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="PG_binding_1" evidence="1">
        <location>
            <begin position="336"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="387" mass="42028" checksum="5FC6FDBB93EBCC8A" modified="2018-04-25" version="1" fragment="single">GYAPKPQPPAMRPVPNAGFDAWVRAFRPQALAQGITPATFDRAFSEAGFLPEVIERDRNQTEFTRTLEDYLAIAASDERVSKGQAALARNRASLNAIEARYGVEPNVVVAVWGLESFYGERRGNVEVISALATLAYEGRRGSFFQSQLIAALKILQNGDTTPHNMTGSWAGAMGHTQFIPTSYLLYAVDFTGDGRRDIWSEDPTDALASTAAYLARSGWTRGQPWGVEVRLPAGFNFGVADQSNRRPVADWRARGVTTMDGRPLPDYGNAAIITPGGMTGPAFAVFDNFFVIKTYNNATAYAMGVGHLGDRIGGGGPIQGAWPRHERELSRTEKMEMQRRLIAMGFDTGATDGVIGPNTIQAIRAYQQSRGLTPDGFATAALLADMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR9</accession>
    <name>A0A2M9PBR9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">MobA_MobL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11185</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MobA/MobL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000663">
        <property type="protein sequence ID" value="PJN94983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005053">
        <property type="entry name" value="MobA_MobL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03389">
        <property type="entry name" value="MobA_MobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0184">Conjugation</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobA_MobL" evidence="3">
        <location>
            <begin position="57"/>
            <end position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11907" checksum="56C22639ADBC4517" modified="2018-04-25" version="1">MLVIPKQGEGRTYTLPCNVCGLKGLRPRRRLPQALAREERMAIYHLSASMIGRSSGRSATASAAYRAACVIRDKRTGEVHDYGRKTGVEATMILAPEGAPDWAHDRAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS8</accession>
    <name>A0A2M9PBS8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000659">
        <property type="protein sequence ID" value="PJN94993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="13739" checksum="F679D0C0E2F2EDB2" modified="2018-04-25" version="1" fragment="single">PAGAASDAVQLGRAGAEFCARSTSGDLASVWPLITAALAKDIEFAFTSAGEAPPPTLFQTYSTRVPVCRAKTRNAALIEVTRSGPKGAAPSWTEYLVVTPETDGTTRIDDVLFATRRSDTLRARLRALAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV1</accession>
    <name>A0A2M9PBV1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000661">
        <property type="protein sequence ID" value="PJN94989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7927" checksum="1F1F498384B0B42C" modified="2018-04-25" version="1">MAQTYSGHKRIRKFYGKIREVAQMPNLIEVQKSSYDLFLNSGDGPAPRDGEDSERERADIPAFLRRQAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB0</accession>
    <name>A0A2M9PCB0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000570">
        <property type="protein sequence ID" value="PJN95176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8329" checksum="AFF96E5867D3A1C8" modified="2018-04-25" version="1">MRHERTGFSDFDMGEALTADGVRLNFLRCGAGAPLVLIHSVHANLRDWTTCALLPLLAQDHEVIAFDRPGAGLSVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH0</accession>
    <name>A0A2M9PCH0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Phosphatidylethanolamine--Kdo2-lipid A phosphoethanolamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_09650</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000538">
        <property type="protein sequence ID" value="PJN95239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016772">
        <property type="term" value="F:transferase activity, transferring phosphorus-containing groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012549">
        <property type="entry name" value="EptA-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040423">
        <property type="entry name" value="PEA_transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30443">
        <property type="entry name" value="PTHR30443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08019">
        <property type="entry name" value="EptA_B_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="86"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="EptA_B_N" evidence="9">
        <location>
            <begin position="2"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="8">
        <location>
            <begin position="170"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="474" mass="51452" checksum="8EE395F3F8CAE276" modified="2018-04-25" version="1" fragment="single">FGFRWLQKPVAIFVLLLSGATSYFMDALGVMIDRDMIQNAMTTTINESKHLMTPDFLLHVLLWSVAPAAIVLWVKVRPSSVWRNLLGWAGMSLASLALFAGLVAADFKTVSAVVREHKELLGSYQPGAPLEGGVKYAKMMMKSRDVTVAPLGRDAVKGPLLLGAGKPMLTVLVVGETARAQNFGLDGYARDTTPELAARDVINFSDVSSCGTATAVSMPCMFSALGRKRYSYKRGIGSENLLDVLSHAGVKVKWWDNNTGDKGIANRVESARVTALVPPCDGECTDEVFLDLVRREMAEMTEDTVLVLHQIGSHGPAYHLRYPKDRERFTPACHSAEFADCTGEEIVNAYDNSILHTDHILASTIDLLAGQDRVIPALLYVSDHGESLGENGLYLHGAPYFMAASTQTQVPMVMWLPEAYAAAFGVNTACLRDEAKLPASHDNLFSSVLGLMDIRTEAKGVGADLISACRRPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK7</accession>
    <name>A0A2M9PCK7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Formate dehydrogenase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000519">
        <property type="protein sequence ID" value="PJN95279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12838">
        <property type="entry name" value="Fer4_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="49"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="112"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15480" checksum="751BBAE95B845899" modified="2018-04-25" version="1" fragment="single">MTLAPEPLTAASNPPVEALEANLGPGDVIRRSATLAADLPAPTRQLTQVAKLIDVSKCIGCKACQSACIEWNDTDPEIEHNVGSYDNPHDLTPEMFTLMRFTEWDNPETGDLEWLIRKDGCMHCADPGCLKACPAPGAIVQYS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS5</accession>
    <name>A0A2M9PCS5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000503">
        <property type="protein sequence ID" value="PJN95323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="92"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="18090" checksum="9BF52FC9751E84B4" modified="2018-04-25" version="1">MGFYGAAEYDLSLIETSPRESLELGRSCVAAGHRGGPGMHLLWSGLAEYVLERDIEILFGTASFPGTDPAPLAEALSFLHHAPAPTPRPWPSRRRSVRRRPSSSRSKGLRRPSFRPRHRVAAHLEHGDQLASFFGQHRGVLLARHGTTHGALPRAAQVIVDVHAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU0</accession>
    <name>A0A2M9PCU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09030</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000492">
        <property type="protein sequence ID" value="PJN95343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="66"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="113"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="155"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="191"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="237"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="262"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="294"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="356"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="398"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="439"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="496"/>
            <end position="517"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="14"/>
            <end position="515"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="574"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="574" mass="59951" checksum="856A223C2C722D51" modified="2018-04-25" version="1" fragment="single">MLELIAHNLAPIMFITVMAMLLIGYPVALTLAAGGLFFFVIGVALSEITPSEINLFWPLLGAQPERVFGIMSNDTLLAIPFFTFMGLILERSGMAEDLLDTIGQLFGPIRGGLAYAVILVGALLAATTGVVAASVIAMGLISLPIMQRFGYAQPAATGTIVASGTLAQIVPPSLVLIVMADQLGVSVGDMYLGAIWPSLMLIGFYCLYIFVLSIVAPSSVPALPVSERTLGSGLTSLLAAIAAAVAIYFAAAHLVFDGLSSGNRLVFSAAAAVILIFLCALLNQRMNLKILSHLADKVIIVLVPPLALIFLVLGTIFLGIATPTEGGAMGAVGALLLAAAKGRLDFPMVKSSVESTTTLSAFVMFILIGARVFGLTFYGVNGNIWLEELLLAIPGGEYGFLVVITIIVFILGCFLDFFEIAFILVPLLAPVASKLGIDLVWFGIILGINLQASFLTPPFGFSLFYLRSVAPARAWLDKRTGRQMPPILTTEIYKGAVPFIGINVGVILLVIAFPYLVTHYKVRAVVATPAAVQVTPPSDGGLGLPPIGGGSPGGDGGLGLPPLGGVPAGGLRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW6</accession>
    <name>A0A2M9PCW6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000474">
        <property type="protein sequence ID" value="PJN95387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="7901" checksum="8F866C59B67FCC63" modified="2018-04-25" version="1">MPDAVAHAALPPVLADASEGEAFAAIADPDVEASPGRKALHAIATKIGRTRLPSAESDIPAGATYLAQFAVHDLDLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX6</accession>
    <name>A0A2M9PCX6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_08765</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000472">
        <property type="protein sequence ID" value="PJN95391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="56"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="93"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14031" checksum="C75369A558F06B8F" modified="2018-04-25" version="1" fragment="single">MGDLLLPFQLPFMQIAFAIALATAVPMAMLSCFLVLRGWALMGDAISHAVLPGIVLAYLAGLPISLGAFAAGFVCAAGTGWLKDNSRVKEDTAMGVVFAGLFGFGLVLYASIPTTLHLSHLLFGDMLGAVWSEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD55</accession>
    <name>A0A2M9PD55_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Iron-sulfur cluster assembly accessory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08270</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HesB/IscA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000435">
        <property type="protein sequence ID" value="PJN95477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.300.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000361">
        <property type="entry name" value="FeS_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016092">
        <property type="entry name" value="FeS_cluster_insertion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017870">
        <property type="entry name" value="FeS_cluster_insertion_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035903">
        <property type="entry name" value="HesB-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01521">
        <property type="entry name" value="Fe-S_biosyn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89360">
        <property type="entry name" value="SSF89360"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00049">
        <property type="entry name" value="TIGR00049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01152">
        <property type="entry name" value="HESB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-S_biosyn" evidence="2">
        <location>
            <begin position="9"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11385" checksum="148819BD5BEC0E17" modified="2018-04-25" version="1">MQLTLPPRVSDRAFARLAEIGAAPRALRVAVEGGGCSGFQYEITLEAAPAPDDMVLEKDGQRVLIDPVSLPFLADAEIDFSDELIGAKFVVKNPNATSSCGCGTSFSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD75</accession>
    <name>A0A2M9PD75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000437">
        <property type="protein sequence ID" value="PJN95474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009933">
        <property type="entry name" value="VirD1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07328">
        <property type="entry name" value="VirD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16504" checksum="1F7E09123C5521C9" modified="2018-04-25" version="1">MIRGKWQDPEAAKKEPRADRTISIRLTEAELAELDAQISGLGLNRNRALRIAARRIGGFLEVDGATVEALRAINRQLAGVATNINQIAHSANRTHDPDYQRFMAQRAELGRIMIETRGALQRILDLGARREDGLERLNAAAEPERAGGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA1</accession>
    <name>A0A2M9PDA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08040</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000419">
        <property type="protein sequence ID" value="PJN95516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10461" checksum="1439EB2FDE01F2B9" modified="2018-04-25" version="1">MRFSETDDYTLAAPVCYPDAEHVPSMVQGGSGSWFLGAPVAAERVLYRFQITLPADGTAAPFVSPLYLSNPGAGLARALTAADIEAYGAWPDLPAEEAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH2</accession>
    <name>A0A2M9PDH2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">RNA polymerase sigma-54 factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rpoN</name>
        <name evidence="11" type="ORF">CNY89_07565</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the sigma-54 factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000385">
        <property type="protein sequence ID" value="PJN95590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001216">
        <property type="term" value="F:DNA-binding transcription activator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000394">
        <property type="entry name" value="RNA_pol_sigma_54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007046">
        <property type="entry name" value="RNA_pol_sigma_54_core-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007634">
        <property type="entry name" value="RNA_pol_sigma_54_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038709">
        <property type="entry name" value="RpoN_core-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32248">
        <property type="entry name" value="PTHR32248"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00309">
        <property type="entry name" value="Sigma54_AID"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04963">
        <property type="entry name" value="Sigma54_CBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04552">
        <property type="entry name" value="Sigma54_DBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000774">
        <property type="entry name" value="RpoN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00045">
        <property type="entry name" value="SIGMA54FCT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02395">
        <property type="entry name" value="rpoN_sigma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00718">
        <property type="entry name" value="SIGMA54_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="8" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Sigma54_CBD" evidence="10">
        <location>
            <begin position="74"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma54_DBD" evidence="9">
        <location>
            <begin position="271"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008798"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023082"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF04552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="431" mass="46689" checksum="F13938179F9C0A7F" modified="2018-04-25" version="1" fragment="single">MALAPRIELRQNQSLAMTPQLQQAIKLLQMNNLALAEFVAAEVEKNPMLEIAPPPPRPSSLRGAGDGWDAMEGVAAETGLTGHLHAQIGATRAEARILAAAHVLVEELEDDGYLRTPLAEIEARHGIAPRDLVRGLALVQSCDPPGVGARRLAECLALQLRDRNRLDPAMQTMLDNLPLLARAKMGELQALCGVDDEDMAEMLAEIRALDPKPGLRFAADAAAAIAPDVFVVRAPGGGWSVELNTETLPRVLVDNHYAARFDASDTTTRAFISELRASATWLARSLEQRARTILRVAADLARHQEAFFDTGPDALRPLTQRSVAERLGLHESTVSRVTAGKFVACDRGVFEMRTLFSSAIQAADGGEAFSATAVQSRIRRMISEESPGLPLSDDKIVARLAEAGIEIARRTVAKYREGMGIPSSVERRRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK1</accession>
    <name>A0A2M9PDK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04250</name>
        <name evidence="2" type="ORF">CNY89_07490</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000379">
        <property type="protein sequence ID" value="PJN95603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000181">
        <property type="protein sequence ID" value="PJN96155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7130" checksum="A27A4AACB5EA0E12" modified="2018-04-25" version="1" fragment="single">MTLDETDHRLLALLRQDGRMSTTLLARHLGVSRGTVQNRIDRLREAGVLLGFTIRLRGDTQTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL1</accession>
    <name>A0A2M9PDL1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07460</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000377">
        <property type="protein sequence ID" value="PJN95613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="3">
        <location>
            <begin position="170"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="246"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="248"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="31211" checksum="D7AC10A867DD0B92" modified="2018-04-25" version="1">MLHTPSWWIDKTNSVHDLVIGLEGAADYRIEGDEFRFGAGEVMLIPAGARFVGRHAEGALYRGVAQHFTLELFGRDLIPRMRLARKIRLSRWNLLEPLVRHYHDIAPPSSTTLMQHPLFMVLLVEFLQDAFLGWRADDAPVTTEDRISVSVAIAAARITADPLEPGLARQVVEAAPYNPDYFRREFRRQTGFTPVKFQEFKRMERAMALLEGGRPVGEAAASVGYPDPYYFSRMFRRYVGTSPSGFKEKMRQAREGKFPRGEEDGQPVFPLARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP7</accession>
    <name>A0A2M9PDP7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 9">GTPase Der</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">GTP-binding protein EngA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">der</name>
        <name evidence="12" type="ORF">CNY89_07335</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 9">GTPase that plays an essential role in the late steps of ribosome biogenesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Associates with the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8 9">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000369">
        <property type="protein sequence ID" value="PJN95628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042254">
        <property type="term" value="P:ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00195">
        <property type="entry name" value="GTPase_Der"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031166">
        <property type="entry name" value="G_ENGA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016484">
        <property type="entry name" value="GTP-bd_EngA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032859">
        <property type="entry name" value="KH_dom-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14714">
        <property type="entry name" value="KH_dom-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006485">
        <property type="entry name" value="GTP-binding_EngA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03594">
        <property type="entry name" value="GTPase_EngA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51712">
        <property type="entry name" value="G_ENGA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7 9" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5 7 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 7" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="EngA-type G" evidence="11">
        <location>
            <begin position="3"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="EngA-type G" evidence="11">
        <location>
            <begin position="199"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="455"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="10">
        <location>
            <begin position="459"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="9"/>
            <end position="16"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="56"/>
            <end position="60"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="119"/>
            <end position="122"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="205"/>
            <end position="212"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="252"/>
            <end position="256"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="317"/>
            <end position="320"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="483" mass="53122" checksum="71135BB0CD503E44" modified="2018-04-25" version="1">MSFTLAIVGRPNVGKSTLFNRLVGRRLALVDDQPGVTRDLREGSGRIGPLRFQVVDTAGLEEATDESLQGRMRALTERAVDAADVCLFLIDARAGVTSTDKLFADLLRKRAARVILVANKTEGKVSDAGYYDAFSLGLGEPVALSAEHGQGFDDLMRALEPIAAEFEGSQAIVDVDVDDLDDDVNEEGEAKPLPPGRPIQIAVVGRPNAGKSTLINAILGENRLLTGPEAGITRDAIAVDADWLGTPFRIFDTAGMRKKAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDVQIPFETQDLRIADLAEREGRAVVVAVNKWDLEDDKSHKLNELREAFGRLLPQLRGAPMVMVSALTGKGLDRLQAAIVKAHAVWNTRISTARLNRWLAPIISDHPPPAPSGRRIRLRYMTQVKTRPPTFVLFASIPEALPEDYRRFLVNGLRRDFDMPGTPIRLFVRGGDNPYADRRKPNTTSLDKHKPRRVTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX3</accession>
    <name>A0A2M9PDX3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000337">
        <property type="protein sequence ID" value="PJN95708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6556" checksum="7E16F37D44161229" modified="2018-04-25" version="1">MGSVLLVAVLLAIGREVVATHPVWMLIPPAAIVVAAFFWYPLAPTAAILALVFIINLMWLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE89</accession>
    <name>A0A2M9PE89_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cysteine desulfurase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000292">
        <property type="protein sequence ID" value="PJN95824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010389">
        <property type="entry name" value="Urate_ox_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06181">
        <property type="entry name" value="Urate_ox_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="176"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="252"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="283"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="Urate_ox_N" evidence="2">
        <location>
            <begin position="6"/>
            <end position="298"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="414" mass="46304" checksum="5CBDA46EF54521D8" modified="2018-04-25" version="1">MYEFAIVWDWLAFAVRWLHVITAIAWIGSSFYFVALDLGLRKTPDLPPGAYGEEWQVHGGGFYHIQKYLVAPERMPDHLIWFKWESYVTWLSGFAMLCIVYYAGADLFLIDRTVLDMSPLVAIVTSLASLSIGWLAYDALCKSPLGKNSTGLMVILFGILVVMAWGYTQVFTGRAALLHLGAFTATIMTANVFFVIMPNQRIVVADLKAGRTPDPKYGVIAKQRSTHNNYLTLPVLFLMLSNHYPLAFATEYNWLIASLVFLMGVTIRHYFNTMHSGKPAPNWTWLATALIFIVIMWLSTATGNERPEPEGMTAVQQRFASAEGFPEVKDAVTGRCSMCHARGEVFWPGVRRAPKGVTLETEADVARHAREIYLQAGRSHAMPPGNVSEMQPEERQMIVDWYERAVSGASSGAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA1</accession>
    <name>A0A2M9PEA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_05900</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a nucleoside 2',3'-cyclic phosphate + H2O = a nucleoside 3'-phosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19621"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:66949"/>
            <dbReference type="ChEBI" id="CHEBI:66954"/>
            <dbReference type="EC" id="3.1.4.16"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a ribonucleoside 3'-phosphate + H2O = a ribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10144"/>
            <dbReference type="ChEBI" id="CHEBI:13197"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18254"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.1.3.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000274">
        <property type="protein sequence ID" value="PJN95880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008663">
        <property type="term" value="F:2',3'-cyclic-nucleotide 2'-phosphodiesterase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008254">
        <property type="term" value="F:3'-nucleotidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07410">
        <property type="entry name" value="MPP_CpdB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041827">
        <property type="entry name" value="CpdB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00786">
        <property type="entry name" value="5_NUCLEOTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="7">
        <location>
            <begin position="16"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="domain" description="5_nucleotid_C" evidence="8">
        <location>
            <begin position="360"/>
            <end position="549"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="798" mass="85345" checksum="221F775A96A8E360" modified="2018-04-25" version="1">MLHPFSARAQAGQAHLRILATTDLHCHVQPYDYYADKPADTLGLARTASLIEGVRAEATNSLLVDNGDYLQGNPMGDYVAYRRGMKPGDVHPVIAGMNALAYDAGTLGNHEFNYGVDFLDLVNAGATFPIVCANFAATLGPTPREDRLRLKPYVILSRTITDGAGAESTVRVGLIGFVPPQILLWDRGHLEGSFAVRDILDAARAWVPEMREAGADIVVALSHSGLEPGPDSPMLENAAFQLAGIDGVDAIVSGHQHRVWPGEDFSGAGFDPATGGVRGKPIVMAGFWGSHMGLIDLMLERTGDGWRIAAFETSARPIYRRNEDRSVTALVPDFAPAIAATAEAHAETLAYVRAEVGISTAPLQSYFAAVADDPSVQIVNQAQAWYVTELLKGTEWEGLPVLSAAAPFKAGGRGGPEYYTDVPAGPIAIKNVADVYLYPNTLQAVAITGAQVQDWLERSAGLFRQIAPGAADQPLLDPAFPTYNFDVIDGVTYAIDVTQPSKYDAEGALANPEARRIVDLAWNGAPVDPEARFVVATNNYRAGGGGHFPGASGDTVVLAAPDTNVDAGGLALAAILGQPLALDDVVDHLGDMRGVIADPLEVLGEEQEMRAHADQAAVLDHVGHHLAEDGVVHLVDLVVLVPDLQREVDVARGVGVEDLGDLDQRGAAHPHDGVGQPHLARARQGDGALGDVLGEVADPLQRVGDLERRDQHPQILGHRLAHGDDLDHLRLERGLQRVERLVALDHLAGEAAVAVLDRFQRLGQQLLAEPAHFRDLALDLDEILVEARDDMRHDDCLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB5</accession>
    <name>A0A2M9PEB5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05840</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000269">
        <property type="protein sequence ID" value="PJN95890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006081">
        <property type="term" value="P:cellular aldehyde metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012394">
        <property type="entry name" value="Aldehyde_DH_NAD(P)"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43570">
        <property type="entry name" value="PTHR43570"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="5">
        <location>
            <begin position="7"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="365" mass="39333" checksum="435408A930BC9CDA" modified="2018-04-25" version="1">MRPATSRIIPEPLGAALVIGAWNYPYQLTLAPLVAAMAAGNACIVKPSELPARTSAALAETLNAAFDPAYLQVVEGGVPETEALLACRFDKIFFTGSTTVGRIVARAAAENLTPVTLELGGKSPCFVFADADLAVTARRIGWGKWLNAGQTCIAPDYVLAERPVYEALLAELVRQIPAIAGADPKTSDSYVRIINRRNLDRLTRLIDPGKVVAGGDFDAAENYLAPTILRDVGWDDPVMQEEIFGPILPVIPFDDLGHAVAAIKARPKPLSFYAFTRSRALQERLLGEVSFGGGCINDVVMHITNTNLPFGGVGGSGMGSYHSEAGFRAFSHYKSVLARPFRFEAPVRYPPRAPWKAALIRWLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB9</accession>
    <name>A0A2M9PEB9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000266">
        <property type="protein sequence ID" value="PJN95895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="19069" checksum="A6855531A5BDC9FB" modified="2018-04-25" version="1" fragment="single">MTFLIADTFTAALARLSGVEQTAAKTAAFDLQTNPAAPGLSLHRVERARDPDFWTARVNRDLRLVLHKRAGDTALLWVGHHDDAYAWAARRRLATHPTTGAAQIVEIRETVEDIVSRRYVEAAAEAPHLFTAVTDAALLSWGVPPDWLATVRAATEETILDIAARLPAEAGEALL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG8</accession>
    <name>A0A2M9PEG8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S18</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">rpsR</name>
        <name evidence="8" type="ORF">CNY89_05555</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6 7">Belongs to the bacterial ribosomal protein bS18 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000252">
        <property type="protein sequence ID" value="PJN95935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00270">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001648">
        <property type="entry name" value="Ribosomal_S18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018275">
        <property type="entry name" value="Ribosomal_S18_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036870">
        <property type="entry name" value="Ribosomal_S18_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13479">
        <property type="entry name" value="PTHR13479"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01084">
        <property type="entry name" value="Ribosomal_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00974">
        <property type="entry name" value="RIBOSOMALS18"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46911">
        <property type="entry name" value="SSF46911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00165">
        <property type="entry name" value="S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00057">
        <property type="entry name" value="RIBOSOMAL_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005589"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8707" checksum="D6697841FE863737" modified="2018-04-25" version="1">MANRPFFRRRKSCPFSGENAPKIDYKDVKLLQRYISERGKIVPSRITAVSAKKQRELARAIKRARFVALLPYAVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK4</accession>
    <name>A0A2M9PEK4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cell envelope protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_05440</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000246">
        <property type="protein sequence ID" value="PJN95952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0261">Viral envelope protein</keyword>
    <keyword evidence="4" id="KW-0946">Virion</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014844953" evidence="1">
        <location>
            <begin position="26"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="71"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="344"/>
            <end position="456"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="473" mass="51009" checksum="41957127A22F7C56" modified="2018-04-25" version="1">MTARIVVRSAAAVAATAVFTTTAQAQVAPPTADIRSTAEEAIIYGLPMSMYYQIMYQYAVDKESSQYKAPFNTIANEPKVYTPADTAIVTPNSDTPYSWLFLDLRAEPVVLCVPEIEKDRYYSVMLTSQYTFNFGYVGSRATGNGAGCYAVAGPGWTGDTPEGVAKVFISETEFALAVYRTQLFNAADIDNVKAIQAKYEAKPLSAFLGGPAPAAAPAIDWPAIDPSTEKKDVLSYLPFLLQFAPPTGPAAVEEPLRAKFATIGIEAGKPFPTVALSDADKAAMAEAGTAAEAAIKAKIEKMGKLDNGWIVVTSGIGNREVYAGDWTQRAAVAVAGILGNDPAEAVYPLTRNDGDGQPLDGSTSNYTLTFPKDAFPPVNAFWSVTMYDGKTQLLVENPIDRYLVNSPMLPDLKTNADGSLTLYIQKNEPTDPDQKANWLPAPDGPIYMVMRLYWPKDEALNGSWSPPAIKRTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN1</accession>
    <name>A0A2M9PEN1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000236">
        <property type="protein sequence ID" value="PJN95983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10974" checksum="7A5DC24E80A00E47" modified="2018-04-25" version="1" fragment="single">MPRVRIAFIGAGVMGRHHIAVAERNPEIEIAGVAEFSPETREKLAARGYATYSDHREMLAALRPEGVVISTPNAFHAPAAIDCLEAGAVPLIEKPVSDTLEAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU0</accession>
    <name>A0A2M9PEU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000212">
        <property type="protein sequence ID" value="PJN96053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="37"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="15580" checksum="49EDF25E7AB4CB3C" modified="2018-04-25" version="1">MQRARASRGFAPKSRAFDNVETLAPAKEIDALVGSRLRARRVELSMSQAALARHLGLTFSQVQKYEKGSNRIGAGRLYQLAALLGVPLQYFFKGLVGPLSEEPGGSPQAAAEDDAKLHDALDRVPDPRARRALLALASSLVEKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU2</accession>
    <name>A0A2M9PEU2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ppk2</name>
        <name evidence="5" type="ORF">CNY89_04860</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000213">
        <property type="protein sequence ID" value="PJN96046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022486">
        <property type="entry name" value="PPK2_PA0141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03707">
        <property type="entry name" value="PPK2_P_aer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="4">
        <location>
            <begin position="91"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="9"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="340" mass="38312" checksum="634E328AC734947E" modified="2018-04-25" version="1">MGKGKKAGKGAASEAEASRQEVDEILTGKETKTKAKDAAAEKAGEASFDKPFDGAVSRYVAEGAPAAVRKLLAGAGKKDILKGQYPYDTQMSSEDYDAEYEACQLELAKLQRWVRATGQRAAIVFEGRDAAGKGGAIRRMTENLNPRYAPVIALPAPSDTQRTQWYFQRYVQHLPAAGEIVIFDRSWYNRAVVEKVFGFCTDGERHAFFQQLPFFEAMLRHDGIVLIKLWLAVSRAEQLRRFLDRESDPLKQWKLSEIDVKGLGRWDDYSDAIAEMFLKSDTEISPWTVILSEDKRRSRIAVMRKVLSMFDYDGKDSPPPDERIVGGPRLLANYAETWER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF11</accession>
    <name>A0A2M9PF11_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000192">
        <property type="protein sequence ID" value="PJN96116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10156" checksum="E1C781C86DFEE29A" modified="2018-04-25" version="1">MADQIVETAAAVDDVRPVIALQVVAKAGAEQVLDRDQNVADRPAAESAPGDQAYGDPRHRVVVTRAVDAAAALDPVAARAAPEVVVAAEADHEIILVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF39</accession>
    <name>A0A2M9PF39_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetyl-CoA C-acyltransferase</fullName>
            <ecNumber evidence="7">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04290</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000183">
        <property type="protein sequence ID" value="PJN96146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020615">
        <property type="entry name" value="Thiolase_acyl_enz_int_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000429">
        <property type="entry name" value="Ac-CoA_Ac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00098">
        <property type="entry name" value="THIOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="5">
        <location>
            <begin position="4"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="6">
        <location>
            <begin position="269"/>
            <end position="390"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="3">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="347"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="3">
        <location>
            <position position="377"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000429-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="391" mass="40833" checksum="FBDA319C1FE67FD6" modified="2018-04-25" version="1">MTNIVIAAAGRTAVGSFNGAFASVPAHELGAAAIKAVLERSGVAAEDVSETILGQVLTANQGQNPARQAHILAGLPQESAAWSLNQVCGSGLRAVALGAQHIMLGDAEIVVAGGQESMSLSPHAAHLRAGQKMGDLKFSDTMIKDGLWDAFNNYHMGTTAENVASQWQITREMQDEFAVGSQNKAEAAQKAGKFDEEIVPFAIKTRKGEVVVDKDEYIRAGATIEAMQKLRPAFSKDGTVTAGNASGLNDGAAMTILMTAENAEKRGIEPLARIAAYATAGLDPKIMGAGPIYASRKALAKAGWKVEDLELIEANEAFAAQALAVNKDMGWDPEIVNVNGGAIAIGHPIGASGARVLNTLLHEMKRRDVKKGLATLCIGGGMGVALCVERP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC8</accession>
    <name>A0A2M9PFC8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1993 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000154">
        <property type="protein sequence ID" value="PJN96247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034660">
        <property type="entry name" value="DinB/YfiT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018531">
        <property type="entry name" value="DUF1993"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36922">
        <property type="entry name" value="PTHR36922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09351">
        <property type="entry name" value="DUF1993"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109854">
        <property type="entry name" value="SSF109854"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9740" checksum="6BA579C08C2B7BB9" modified="2018-04-25" version="1" fragment="single">EGLAGRLAETRRLLAGLDPAAFLGAEKRITRGQAGFATVELPGEAFLQEFGLPNVYFHHAMAHVALKLAGARLGKADYDGLHLYPEGFSFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG3</accession>
    <name>A0A2M9PFG3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lysine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Lysyl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_03560</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys)</text>
            <dbReference type="Rhea" id="RHEA:20792"/>
            <dbReference type="Rhea" id="RHEA-COMP:9696"/>
            <dbReference type="Rhea" id="RHEA-COMP:9697"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78529"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.6"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.6" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000147">
        <property type="protein sequence ID" value="PJN96269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004824">
        <property type="term" value="F:lysine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006430">
        <property type="term" value="P:lysyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002904">
        <property type="entry name" value="Lys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37940">
        <property type="entry name" value="PTHR37940"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01921">
        <property type="entry name" value="tRNA-synt_1f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00467">
        <property type="entry name" value="lysS_arch"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="446" mass="50187" checksum="663D12288D6C3CD6" modified="2018-04-25" version="1" fragment="single">MTDTRALAQNAKAWPFEEARRLVKRYEKTPPEKGYVLFETGYGPSGLPHIGTFGEVARTTMVRRAFQEISDIPTRLICFSDDMDGMRKVPENVPNQEMLREHLQRPLTSVPDPFGQFESFGAHNNAMLRRFLDTFGFEYEFVSATEFYKSGRFDPTLRLAAERYDAIMEIMLASLREERQKTYSCFLPISPTTGRVLYVPLKEVNAAEGTITFDDEDGTETTLPVTGGHVKLQWKPDFGARWAALGVDFEMYGKDHATNTPIYDGICEVLGGRAPEHFIYELFLDDKGQKISKSKGNGLSIDEWLTYASPESLALFMYGKPKTAKRMYFDVIPKAMDDYDAHLRGFAGQEKALRLENPAWHIHGGAAPASDMEVSYSMLLNLASAANAANKDVLWGFIRKYAPDATPETQPGLDQAAEFAVRYVRDFVAPARRYRGPDQLEATALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH5</accession>
    <name>A0A2M9PFH5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 13">Replicative DNA helicase</fullName>
            <ecNumber evidence="4 13">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_03520</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 13">Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3 13">Belongs to the helicase family. DnaB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="4 13"/>
    <dbReference type="EMBL" id="PHNO01000144">
        <property type="protein sequence ID" value="PJN96279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990077">
        <property type="term" value="C:primosome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006269">
        <property type="term" value="P:DNA replication, synthesis of RNA primer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00984">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036185">
        <property type="entry name" value="DNA_heli_DnaB-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007692">
        <property type="entry name" value="DNA_helicase_DnaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007694">
        <property type="entry name" value="DNA_helicase_DnaB-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007693">
        <property type="entry name" value="DNA_helicase_DnaB-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016136">
        <property type="entry name" value="DNA_helicase_N/primase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00772">
        <property type="entry name" value="DnaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03796">
        <property type="entry name" value="DnaB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48024">
        <property type="entry name" value="SSF48024"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00665">
        <property type="entry name" value="DnaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51199">
        <property type="entry name" value="SF4_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 13" id="KW-0235">DNA replication</keyword>
    <keyword evidence="12 13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 13 15" id="KW-0347">Helicase</keyword>
    <keyword evidence="9 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 13" id="KW-0639">Primosome</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF4 helicase" evidence="14">
        <location>
            <begin position="187"/>
            <end position="484"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU362085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="493" mass="53569" checksum="C70A1594141E3241" modified="2018-04-25" version="1">MADGSTAPEPDLGGAPHNIEAEQALLGALLVNNDVYDRVASIVRSEHFHEPVHARIFEAAANRIQKNALASPVTLKAFFEDDPGLKELGGPAYLARLAGAAISLFAARDYAQLVYDLAIRRDLILIGQDIADKAGRMDLDSEPKDQIVEAEQALYQLGEQGKVDKGFQSFLRAATDAVMVANAAYRRDGGLAGISTGLADLDAKLGGLHPSDLLILAGRPSMGKTSLATNIAFNIAKAYKRGQRPDGSEGAIEGGVVGFFSLEMSAEQLAARVLSEASRVPSDRIRRGDLTEDEMRRFIEAAKALEACPLFIDDTPALPISTLAARARRLKRQHGLDALFVDYLQLAKASGRSEGRVQEVSEITQGLKAIAKELNVPVVALSQLSRQVESREDKRPQLSDLRESGSIEQDADVVMFVFREEYYKEREKPGDHDIEGMMKWKDAMSAVHGKAEVVIGKQRHGPIGTVELAFEGEFTRFSNLVRAYQAGAQVEGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI4</accession>
    <name>A0A2M9PFI4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03335</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000134">
        <property type="protein sequence ID" value="PJN96307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="162"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="250"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="293"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="319"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="352"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="383"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="11"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="412" mass="42356" checksum="AE25249111BE48F8" modified="2018-04-25" version="1">MSPTAARILTPTLIAASFILLVGFGVRASFGVFQIPIASQFGWPRADFSLAIAIQNLAWGFGQPVFGAIAERFGDRKALLLGAALDALGLVLSASAVTPGAHQILNILIGFGIAGTGFGVILGIAGRAAAPENQSLTLGIATAAGSAGQMVGPPIAEALLSVMSWSSVFVVFAAVVILSMLVLPALRAPMQAPAAAGENMASALRQALKDPSFTLIFLGFFSCGYQLGFITAHFPAFITEVCSPIPANSILASLGITTTSALGAIAIAVIGFANIGGSLAAGALGKHFSKKYLLAQIYVARTIVSAAFILAPMTPGSVLLFSLVMGALWLATVPLTSGLIAQIYGVRYMGTLYGIVFLSHQIGAFMGVWLGGALYDVTGSYDLVWWVGVGVGAFSAIIQLPIRERPLAALPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI9</accession>
    <name>A0A2M9PFI9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">DoxX family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03230</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DoxX family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000130">
        <property type="protein sequence ID" value="PJN96323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07681">
        <property type="entry name" value="DoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="13860" checksum="D6FE97BC4E2C93A7" modified="2018-04-25" version="1">MVGKNLNAWAPVFLSLLRIVSALIFMAHGTTKLLNFPASEMSPAAFSLPWIAGVFELVGGALLVIGLWSRPVAFLLSGVMAAAYFLAHAPQNFYPVLNGGDAAILYCFVFLYLVFAGPGPWSVDAARGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN6</accession>
    <name>A0A2M9PFN6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Fructose-1,6-bisphosphate aldolase</fullName>
            <shortName evidence="10">FBP aldolase</shortName>
            <ecNumber evidence="10">4.1.2.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_02955</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate</text>
            <dbReference type="Rhea" id="RHEA:14729"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.1.2.13"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="9">Binds 2 Zn(2+) ions per subunit. One is catalytic and the other provides a structural contribution.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="10">One is catalytic and the other provides a structural contribution.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate biosynthesis; Calvin cycle.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 10">Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 10">Belongs to the class II fructose-bisphosphate aldolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.13" evidence="10"/>
    <dbReference type="EMBL" id="PHNO01000116">
        <property type="protein sequence ID" value="PJN96367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00183"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00116"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019253">
        <property type="term" value="P:reductive pentose-phosphate cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00947">
        <property type="entry name" value="TBP_aldolase_IIB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000771">
        <property type="entry name" value="FBA_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006412">
        <property type="entry name" value="Fruct_bisP_Calv"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01116">
        <property type="entry name" value="F_bP_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001359">
        <property type="entry name" value="F_bP_aldolase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00167">
        <property type="entry name" value="cbbA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01521">
        <property type="entry name" value="FruBisAldo_II_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00602">
        <property type="entry name" value="ALDOLASE_CLASS_II_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00806">
        <property type="entry name" value="ALDOLASE_CLASS_II_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0113">Calvin cycle</keyword>
    <keyword evidence="10" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 10" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Dihydroxyacetone phosphate binding" evidence="8">
        <location>
            <begin position="233"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="region of interest" description="Dihydroxyacetone phosphate binding" evidence="8">
        <location>
            <begin position="275"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="198"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>dihydroxyacetone phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:57642"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="232"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001359-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU365019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="359" mass="38855" checksum="75ABC44550C4FDE0" modified="2018-04-25" version="1">MAKITLRQLLDHAAERGYGAPAFNINNMEQGLAIMEAARACDAPVILQASRGARSYAGDVMLARMVEALAEMFPEIPLCLHQDHGNDEATCLTAIRHGFTSVMMDGSLEADMKTVASYEYNVAITERVSRMAHWVGASVEGELGVLGSLESGEGEAEDGHGAVGKLDHSQLLTDPEQAVDFVARTGVDALAIACGTSHGAYKFTRRPDGEILAMKVIEEIHRRLPQTHLVMHGSSSVPQELQDIINANGGEMPQTFGVPVEEIVRGIRHGVRKVNIDTDCRMAMTAEFRRVAMSSRKEFDPRKFLKPAMDALASLCRDRFEAFGTAGNASRIKVIPMDDMAKRYATGALAPATSTARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP0</accession>
    <name>A0A2M9PFP0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal subunit assembly factor BipA</fullName>
            <ecNumber evidence="3">3.6.5.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">GTP-binding protein BipA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">typA</name>
        <name evidence="3" type="synonym">bipA</name>
        <name evidence="5" type="ORF">CNY89_03480</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">A 50S ribosomal subunit assembly protein with GTPase activity, required for 50S subunit assembly at low temperatures, may also play a role in translation. Binds GTP and analogs. Binds the 70S ribosome between the 30S and 50S subunits, in a similar position as ribosome-bound EF-G; it contacts a number of ribosomal proteins, both rRNAs and the A-site tRNA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>GTP + H2O = GDP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:19669"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58189"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="3">Binds to ribosomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. BipA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.-" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000142">
        <property type="protein sequence ID" value="PJN96284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000027">
        <property type="term" value="P:ribosomal large subunit assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03710">
        <property type="entry name" value="BipA_TypA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00849">
        <property type="entry name" value="BipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035651">
        <property type="entry name" value="BipA_V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000640">
        <property type="entry name" value="EFG_V-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042116">
        <property type="entry name" value="TypA/BipA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006298">
        <property type="entry name" value="TypA_GTP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42908:SF8">
        <property type="entry name" value="PTHR42908:SF8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00679">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00838">
        <property type="entry name" value="EFG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01394">
        <property type="entry name" value="TypA_BipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0690">Ribosome biogenesis</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="3" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Tr-type G" evidence="4">
        <location>
            <begin position="1"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="13"/>
            <end position="18"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="126"/>
            <end position="129"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="606" mass="66306" checksum="2C93799FF245D2DE" modified="2018-04-25" version="1">MDIRNIAIIAHVDHGKTTLVDALLKQAGSFRENQATVERAMDSNDLERERGITILAKATSVEWEGHRVNIVDTPGHADFGGEVERILGMVDGVVLLVDAAEGPMPQTKFVTSKALAMGLKPIVVLNKVDKPDAEPDRALNEVFDLFVTLDANEEQLDFPVLYASGRAGWADDSLEGPRKDLSALFNLVLEHVPAPAQVAHADEPFSMLATTLAADPFLGRLLTGRIETGTVKTGQMVKAMSREGEEIERFRVSKILAFRGLARTPIDSAEAGDIVSLAGMSKATVADTIADFSISEALPAQPIDPPTISVTFGINDSPLAGREGDKVQSRVIRDRLMREAETNVAIRVADTPGGEAYEVSGRGELQMGVLIENMRREGFELSISRPQVLFRQEGGERLEPIEEVTVDVDEEFSGVVVDKLSQRKGELVEMRTGAGGKTRIVAHVPSRGLIGYHGEFLTDTRGTGVLNRVFHDWSPYRGPIPGRRNGVLISIEDGVSVAYAIFNLEDRGKFFIGSGEQVYQGMILGEHSRDNDLEVNPLKGKKLTNVRASGTDEAVRLTTPVRLTLEQAIAYIEEDELVEVTPKSIRLRKRHLDPNERKRQSRQAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ4</accession>
    <name>A0A2M9PFQ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">NADH-quinone oxidoreductase subunit M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03020</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 4">Membrane</location>
            <topology evidence="2 4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the complex I subunit 4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000119">
        <property type="protein sequence ID" value="PJN96358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000260">
        <property type="entry name" value="NADH4_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010227">
        <property type="entry name" value="NADH_Q_OxRdtase_chainM/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003918">
        <property type="entry name" value="NADH_UbQ_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43507">
        <property type="entry name" value="PTHR43507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01059">
        <property type="entry name" value="Oxidored_q5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01437">
        <property type="entry name" value="NUOXDRDTASE4"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01972">
        <property type="entry name" value="NDH_I_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="112"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="166"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="206"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="287"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="312"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="343"/>
            <end position="362"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="369"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="418"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="463"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="domain" description="Oxidored_q5_N" evidence="7">
        <location>
            <begin position="38"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="6">
        <location>
            <begin position="130"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="511" mass="55772" checksum="5DED6EFD0221051C" modified="2018-04-25" version="1">MDNLLSLVTFLPLIGAIVLLVFLRGEDEAATRNAKLLALFTTTATFLLSLFVYFGFDPANTGFQFVEESPWLGGLTYKMGVDGISVLFVMLTTVLMPLVIAASWEVKTRVKEYMIAFLVLETLMIGVFCALDLVLFYIFFEAGLIPMFLIIGIWGGKERIYASFKFFLYTFLGSVLMLVAMIAMWADAGTTDIPTLMTHVFSSAPMSVLGITITGGLQTLLFLAFFASFAVKMPMWPVHTWLPDAHVQAPTAGSVVLAAILLKMGGYGFLRFSLPMFPVGSQTMQDFVFLLSVVAIVYTSLVALVQEDMKKLIAYSSVAHMGFVTMGIFAFNQQGIDGGIFQMISHGFISGALFLIVGVIYDRMHTREIAAYGGLVIRMPVFALMFMLFTMGNVGLPGTSGFVGEFLTMAGAFQVNTWVAFGAAFGVILSAAYALFLYRRVVFGDLIKESLKTIKDMDRREKLIFAPLVVATLWLGIYPSSVLDVIGPSVAALVDHHQTALAASATAFASN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ4</accession>
    <name>A0A2M9PFZ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_02430</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000092">
        <property type="protein sequence ID" value="PJN96458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="174"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="356"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="400"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="44616" checksum="2F2579A34A759918" modified="2018-04-25" version="1">MTATASPARRKGVLETLEVDTRLLGMIGAFLVICLVFHLYTDGRFLTPRNIFNLTIQTVSVAIMATGMVFVIVTRNIDLSVGSILCVCSAVMAMMQTFVLPKMLGLGLGHGLIAPVAILAGIGTGALIGAFNGWLVGYLTIPAFIVTLGGLLVWRNVGWYLTSGQTIGPLDPTFLIFGGSNGTIGTTASWIVGLIGAGIALWGFARARQGKIAHGFAVKPLWAEAVVAGAVVAAILGFVAILNAYEIPVGALRRIFAERGETMPEGYVEGYGLPISVLVLIAVAVAMTVTARRTRFGRYIFATGGNPDAAELSGINTRLLTVKVFALMGALCGLSAVVAAARLTNHANDIGTLDELRVIAAAVIGGTALSGGIGTIHGAILGALIMQSLQSGMAMVGVDAPFQNIVVGVVLVLAVLIDIQYRKRTGVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG37</accession>
    <name>A0A2M9PG37_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000077">
        <property type="protein sequence ID" value="PJN96510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051276">
        <property type="term" value="P:chromosome organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1400">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038713">
        <property type="entry name" value="Terminase_Gp1_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005335">
        <property type="entry name" value="Terminase_ssu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03592">
        <property type="entry name" value="Terminase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22865" checksum="878E529CEB4F8F48" modified="2018-04-25" version="1">MTANVPAPCDHDVDILDPEDGIVDPRLSDRDIAFCHLFMSNGGDATAAALSCGYPPARATTFGLSLLERPEISGYISALWRDEARASGITATTLIRQVRELAFGNIDDHVEKVVGDSGFVTIRLRNDVPRAKMAAVKSITVKETPGKFGVSRTVSVVLHDPMKPLMLLMTLLGITPKPQPVDAGGPVNPMAEFEQYSLEELEALAKKRGLPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG46</accession>
    <name>A0A2M9PG46_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AMP nucleosidase</fullName>
            <ecNumber evidence="1">3.2.2.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">amn</name>
        <name evidence="4" type="ORF">CNY89_02240</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + H2O = adenine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:20129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.2.2.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the AMP nucleosidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.4" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000083">
        <property type="protein sequence ID" value="PJN96489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008714">
        <property type="term" value="F:AMP nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044209">
        <property type="term" value="P:AMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01932">
        <property type="entry name" value="AMP_nucleosidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037109">
        <property type="entry name" value="AMP_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011271">
        <property type="entry name" value="AMP_nucleosidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018953">
        <property type="entry name" value="AMP_nucleoside_Pase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43691:SF6">
        <property type="entry name" value="PTHR43691:SF6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10423">
        <property type="entry name" value="AMNp_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01717">
        <property type="entry name" value="AMP-nucleosdse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMNp_N" evidence="3">
        <location>
            <begin position="28"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="PNP_UDP_1" evidence="2">
        <location>
            <begin position="280"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10423"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="494" mass="54892" checksum="8F9C1A1612BDC605" modified="2018-04-25" version="1">MIPRPPFAELPVIAPESEPAQMFADAAEAVAELNRRYQRATGFLRDRFAEVMAGKTPEGRYRAWYPEVSVTTGSFAKTDSRLSFGHVTEPGTYSTTITRTELMRAYLTQQIGLLIQNHGMPVRVGESDTAIPLHFAMEEGAHVEGSIVDTLHRPLRDVFDVPNLETTDDHIVNGTPRIGPDGARPLAPFTAQRIDYSLARLAHYTATSPTHFQNHVLFTNYQFYMDEFVDYAHRALMDPDSGYEALVSPGNVTRTRDGASGEPKAPQMPAYHLIRENNSGITLVNIGVGPSNAKTITDHIAVLRPHVWLMLGHCAGLRNSQSLGDYVLAHAYMREDHVLDDDLPIWVPIPALAEVQVALEEAVAEITGLEGYDLKRIMRTGTVATIDNRNWELRDQSGPVARLSQARAIGLDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMATAFYKRQVAQHLLIGIRAMESLRDMPLEKLHSRKLRSFDETAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG86</accession>
    <name>A0A2M9PG86_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetylpolyamine amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the histone deacetylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000065">
        <property type="protein sequence ID" value="PJN96565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000286">
        <property type="entry name" value="His_deacetylse"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023801">
        <property type="entry name" value="His_deacetylse_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00850">
        <property type="entry name" value="Hist_deacetyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01270">
        <property type="entry name" value="HDASUPER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hist_deacetyl" evidence="2">
        <location>
            <begin position="1"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20082" checksum="171B14030CCCC567" modified="2018-04-25" version="1" fragment="single">PGHHASRRAMGGYCFLNNAAVAAEWLRAQGAARVSVLDVDYHHGNGTQDIFYDRADVQTVSVHADPMVEYPYFLGHADERGRGAGEGFNLNLPLPMGTDYASWAEALDIACDAVTAFAPDALVVSLGVDTFQGDPISRFRLETVDYPPIGARIARLRRPTLFVLEGGYAVEAIGVNAVGVLTGFEDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE3</accession>
    <name>A0A2M9PGE3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Hflx-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_01525</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000055">
        <property type="protein sequence ID" value="PJN96609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01878">
        <property type="entry name" value="HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01716">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11060">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00900">
        <property type="entry name" value="GTPase_HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00436">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030394">
        <property type="entry name" value="G_HFLX_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032305">
        <property type="entry name" value="GTP-bd_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016496">
        <property type="entry name" value="GTPase_HflX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025121">
        <property type="entry name" value="GTPase_HflX_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042108">
        <property type="entry name" value="GTPase_HflX_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005001">
        <property type="entry name" value="Hfq"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10229">
        <property type="entry name" value="PTHR10229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16360">
        <property type="entry name" value="GTP-bdg_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13167">
        <property type="entry name" value="GTP-bdg_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17209">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00326">
        <property type="entry name" value="GTP1OBG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03156">
        <property type="entry name" value="GTP_HflX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02383">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51705">
        <property type="entry name" value="G_HFLX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Hflx-type G" evidence="7">
        <location>
            <begin position="278"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="237"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="48779" checksum="03AF87DE6E5CBA12" modified="2018-04-25" version="1" fragment="single">MAADKQNLQDAFLNNVRKAKVPVTIFLMNGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTVMPSQPSPCTRPKITDSDMRMRAMVLHPVFSRSGSPRDPGDALAEAESLARALDLELVESRLAPVSRMRAGTLFGSGKVEEIAELVKEAEIGLVIVDGPLSPIQQRNLERAWKAKVLDRTGLILEIFGDRARTREGVLQVELAHLTYQKSRLVRSWTHLERQRGGFGFLGGPGETQIEADRRALDERIERIREALAKAVRTRGQHRAARKRSDIPVVALVGYTNAGKSTLFNRLTGAGVLARDMLFATLDPTMRAIEIAPGRRVVLSDTVGFISDLPTQLVAAFRATLEEVIDADLILHVRDIAHPESAIQAKDVRDILTELGIGEADEERIVEVWNKIDALPEGEGEALRQTAVFVGHGVMFTNGLLPRATNLDGSLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP0</accession>
    <name>A0A2M9PGP0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DNA-directed RNA polymerase subunit beta</fullName>
            <ecNumber evidence="7">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">rpoB</name>
        <name evidence="14" type="ORF">CNY89_00990</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 7">
            <text>a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:21248"/>
            <dbReference type="Rhea" id="RHEA-COMP:14527"/>
            <dbReference type="Rhea" id="RHEA-COMP:17342"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61557"/>
            <dbReference type="ChEBI" id="CHEBI:140395"/>
            <dbReference type="EC" id="2.7.7.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the RNA polymerase beta chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000034">
        <property type="protein sequence ID" value="PJN96700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032549">
        <property type="term" value="F:ribonucleoside binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00653">
        <property type="entry name" value="RNA_pol_B_RPB2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.270.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01321">
        <property type="entry name" value="RNApol_bact_RpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042107">
        <property type="entry name" value="DNA-dir_RNA_pol_bsu_ext_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019462">
        <property type="entry name" value="DNA-dir_RNA_pol_bsu_external_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007120">
        <property type="entry name" value="DNA-dir_RNAP_su2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037033">
        <property type="entry name" value="DNA-dir_RNAP_su2_hyb_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010243">
        <property type="entry name" value="RNA_pol_bsu_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007121">
        <property type="entry name" value="RNA_pol_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007642">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007645">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007641">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014724">
        <property type="entry name" value="RNA_pol_RPB2_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="PTHR20856"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04561">
        <property type="entry name" value="RNA_pol_Rpb2_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04565">
        <property type="entry name" value="RNA_pol_Rpb2_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10385">
        <property type="entry name" value="RNA_pol_Rpb2_45"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00562">
        <property type="entry name" value="RNA_pol_Rpb2_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04560">
        <property type="entry name" value="RNA_pol_Rpb2_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02013">
        <property type="entry name" value="rpoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01166">
        <property type="entry name" value="RNA_POL_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="1 7 14" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="3 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA_pol_Rpb2_2" evidence="11">
        <location>
            <begin position="4"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_2" evidence="11">
        <location>
            <begin position="200"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_3" evidence="12">
        <location>
            <begin position="358"/>
            <end position="426"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_45" evidence="13">
        <location>
            <begin position="436"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_6" evidence="9">
        <location>
            <begin position="562"/>
            <end position="1121"/>
        </location>
    </feature>
    <feature type="domain" description="RNA_pol_Rpb2_7" evidence="10">
        <location>
            <begin position="1123"/>
            <end position="1197"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="865"/>
            <end position="892"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF04561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF04565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF10385"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN96700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="1202" mass="133408" checksum="FC862A8A250A1AB9" modified="2018-04-25" version="1" fragment="single">LLFTSRIIPYRGSWLDFEFDAKDIVYARIDRRRKLPVTTLLYALGLDQEGICDAFYETVTYRREPDGWATRFFPERVRGAKPTHDIVNAATGEVIAAAGKKITPRMVKEWQDRGDIAEVLTPFEGIIGRYAAKDIINETTGAIWIEAGDELTWEVDAKTGDVTGGTLKVLLDNGVTEIPTLDIDNINVGAYIRTTMAVDKNYNRDQSLMDIYRVMRPGEPPTVDAASVMFDNLFFDSERYDLSAVGRVKMNMRLDLDAPDTTRTLRREDIIAVVKALVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIRERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGPNIGLINSLASFARVNKYGFIETPYRRVRDSQVTDEVQYMSATEEMRYTIAQANANLDGEGRFTNDLVSTRKGGDFMLNPPTNVDLIDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGIEEIVARDSGAAHVARRAGVVDQVDAMRIVIRATEDVGPGDPGVDIYRLRKFQRSNQNTCINQRPLVKVGDTVQRGQFIADGPSTDMGELALGKNVLVAFMPWNGYNYEDSILISERIVKDDVFTSIHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVGPADILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGDFGTVVEVRVFNRHGVDKDERALQIEREEVERLSRDRDDELAILERNIYSRLKDMVLGKVAVKGPRGVKAGSEVTEELLGTLSRGQWWQLALGEDADAQAQEQLHAQFELQKKALERRFEDKVEKVRRGDDLPPGVMKMVKVFIAVKRKLQPGDKMAGRHGNKGVISRVVPEEDMPFLADGTPVDFVLNPLGVPSRMNVGQILETHMGWAARGLGKSIDLGLQEYRRSGDMTPVKEAMKVAYGEDIYNGVLSDMDQDAFLEAAGNVTHGVPIATPVFDGAKEADVNNALERAGFDTSGQSIVYDGRTGERFARPVTVGVKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEIRSLGLNIELLDSEAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP9</accession>
    <name>A0A2M9PGP9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutamine amidotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000027">
        <property type="protein sequence ID" value="PJN96729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="1">
        <location>
            <begin position="2"/>
            <end position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="300" mass="31701" checksum="88EC636DB9DCF765" modified="2018-04-25" version="1">MCGIVGLFLKDKALEPQLGALLSEMLITMTDRGPDSAGIAIYGGGAEGRAKITVQSATPSTTFAGLETDLAAAGFPGSVTVKSTHAVIDLPVEALETARRWLAARPGVRIMGAGERIEIYKETGLPKDVVARFDLCAMSGSHGIGHTRMATESAVTTLGAHPFSTGSDQCLVHNGSLSNHNNLRRELAHAGMTFETQNDSEVAAAYLSAEMAAGKDLGQALKGALDDLDGFFTFVVGTQSGFGVLRDPIACKPAVMAETDRYVAFGSEYRALVGLPGIETARVWEPEPATLYFWDYEKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT0</accession>
    <name>A0A2M9PGT0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000024">
        <property type="protein sequence ID" value="PJN96741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="2">
        <location>
            <begin position="135"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="394" mass="43929" checksum="9C6577132DF69DE5" modified="2018-04-25" version="1">MNSSRRNRPVDQAGYGWIATSASDGSMLFALQILTLVFAALVAAVTLLPLSTSRRWWVRIWDFPRLHLAGACALLLPLALLLERPLSWIVGAGALAGLAWQLSWIWPFTPFARAEVRLASDAPDGVTLLAVNVLQENTQHDRVLRLIEQVDPDVLLLMETDPRWIDALAPALAAYPTVVCDPREDFYSMTFATRLPTTEARIMRLTHDETPTLFAELKARNGQEFVYVGLHPQPPTPDGADTDERDAQIAYSARFARREDRPLVAMGDFNEAAWSLSAQEFRRVGGYVDPRRGRGFFSSFHAEHPMIRAPIDQVYVTADVAVVGIALGPRVGSDHFPLIARLRFEPELAAQLNRPPKPLDPGEITRIDEVVEAYRTRLAKAHMEMEADRSTSST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P467</accession>
    <name>A0A2M9P467_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004864">
        <property type="protein sequence ID" value="PJN92334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7935" checksum="C7B44C1B33D1AE33" modified="2018-04-25" version="1" fragment="single">PHCPFLSEWTGRPVHRRSDTLDRRPAAQPALLLDRGDQRRDPAAARRDQRARHARLRRQPRRSLRHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E4</accession>
    <name>A0A2M9P4E4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004659">
        <property type="protein sequence ID" value="PJN92400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7369" checksum="4EDF28F670C7703A" modified="2018-04-25" version="1" fragment="single">EGVTIEDEVFVGHGVMFTNGLLPRATNLDGSLQRDGDWDCTPTLVRRGAAIGSNATIVCGVTIGGGRPGGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I3</accession>
    <name>A0A2M9P4I3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_29820</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004567">
        <property type="protein sequence ID" value="PJN92428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8284" checksum="FE702CA855635132" modified="2018-04-25" version="1" fragment="single">KEIDERVGAFLNRPLEGDWPYLWLDATYLKVREGGRIVSVAAIIAMAVNTDGRREIVGLHIGPSEAEPFWASFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E3</accession>
    <name>A0A2M9P5E3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_26985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003600">
        <property type="protein sequence ID" value="PJN92749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016868">
        <property type="term" value="F:intramolecular transferase activity, phosphotransferases"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_III" evidence="2">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="2">
        <location>
            <begin position="67"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10493" checksum="88FC99285D3C0D28" modified="2018-04-25" version="1" fragment="single">AMRAGGYNLGGEQSGHIVMTDFVTTGDGLIAALQFLSAMVETGRRASELARVFAPFPQVLRNVRYRKAMRAGGYNLGGEQSGHIVMTDFVTTGDGLIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F8</accession>
    <name>A0A2M9P5F8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003603">
        <property type="protein sequence ID" value="PJN92748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7039" checksum="D3C3B74BA8ADAE74" modified="2018-04-25" version="1" fragment="single">MTIEDNYFGDYLSADPSDPTNKESIQFYTNGSTAPSEGVTIRGNTFSSEDYRQNILIFNELY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H1</accession>
    <name>A0A2M9P5H1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003442">
        <property type="protein sequence ID" value="PJN92796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="10745" checksum="2C1FD0DD0DF4DFFD" modified="2018-04-25" version="1" fragment="single">KSAETKAGNDARFAELLAKFDILSAKIDGLPSTWKVIGIVGSALGVSLGIVFAVLAFAGDRFDGGIGVTAASEGLARQNAAAIQEVLQSNEVLGARVDQAIRAMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T9</accession>
    <name>A0A2M9P5T9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003095">
        <property type="protein sequence ID" value="PJN92921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9651" checksum="252362FCC952663C" modified="2018-04-25" version="1" fragment="single">DREMVDVLALVLQHDEESVLCAVDMALTAGVPTKMHVLNLLHRLTCGNAPDLPEIDLPKALALVEEPQANVYRYDGLRSRTQGARDAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V0</accession>
    <name>A0A2M9P5V0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Reverse transcriptase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003069">
        <property type="protein sequence ID" value="PJN92934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000477">
        <property type="entry name" value="RT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00078">
        <property type="entry name" value="RVT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50878">
        <property type="entry name" value="RT_POL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Reverse transcriptase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13158" checksum="31F788F8C3851160" modified="2018-04-25" version="1" fragment="single">LGRKRNGRGRVCSPADFAEHVRSRKDGLVRTHDQTFGIPQGTPISGLYANIYLRTFDREMIAWCARLGGSYRRYSDDIAVILPLGAKVRHVVAVVEKMLADYGLAMSVDKTDSADFKGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z2</accession>
    <name>A0A2M9P5Z2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002952">
        <property type="protein sequence ID" value="PJN92974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10786" checksum="6A84D4C31762E452" modified="2018-04-25" version="1" fragment="single">LGLFLGGAVAAAAQEACLRPIPPEEIEPPRDDPEFRAFLNQEYQTYLLGMQDYLNCLGREHDSARKETSEVMSRWVLWFGDDAVIRQRQSTSSPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P638</accession>
    <name>A0A2M9P638_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002855">
        <property type="protein sequence ID" value="PJN93016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7897" checksum="9A1EE81C6F919531" modified="2018-04-25" version="1" fragment="single">MLVGIGAATFALVTLQMIETFAHRPDTIRMDPIRLIEAAYVPAGVAAVGHFPINDPEIEVYRRREDQHVVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A7</accession>
    <name>A0A2M9P6A7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09510</name>
        <name evidence="1" type="ORF">CNY89_23710</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002613">
        <property type="protein sequence ID" value="PJN93104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000525">
        <property type="protein sequence ID" value="PJN95261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="21" mass="2609" checksum="BD306B8E78E17043" modified="2018-04-25" version="1">MNTLTPSWRRRIAFAFLFPQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A8</accession>
    <name>A0A2M9P6A8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002646">
        <property type="protein sequence ID" value="PJN93086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002692">
        <property type="entry name" value="S45"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34218">
        <property type="entry name" value="PTHR34218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01804">
        <property type="entry name" value="Penicil_amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="110"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14487" checksum="876BBDCA5C7B8EF7" modified="2018-04-25" version="1" fragment="single">GSTSRGLVPSAGWLAVNDWKGTRPYDSNPWILNPPGGVVANTNNRLTDAPFPDHLSFDWGDAHRILRAERLLSARRIHTRDSFVGIQTDTVSEAARTLLPLIGCCRRAGSTRATASSASRPTPSPRPRARSCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6C8</accession>
    <name>A0A2M9P6C8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Mrr_cat_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002713">
        <property type="protein sequence ID" value="PJN93068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039442">
        <property type="entry name" value="Mrr-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13156">
        <property type="entry name" value="Mrr_cat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mrr_cat_2" evidence="1">
        <location>
            <begin position="51"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10580" checksum="0EA875FB11C86B5E" modified="2018-04-25" version="1" fragment="single">MNRSVAHPAATAEEKRLHPLQALLAQYRSAARTEREKGTYFERLTIAFLEHDPIQVEQYDGIWTYAEWAKKKGWDGRDTGIDLVAKLRHEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I0</accession>
    <name>A0A2M9P6I0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Modification methylase PaeR7I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002468">
        <property type="protein sequence ID" value="PJN93152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15378" checksum="2BF27FC2E46B1368" modified="2018-04-25" version="1" fragment="single">RAFVASGFHLRAYVDMVNTPAFHADVVAYPAITIIAREAAGLTRIAHRPEIDQDTLTRLAAELTGPSPDPARGVREIARVTAGAEPWILESSDQLALVRRLEASFPTIEEAGCKVGIGVATGADKAFIGRFDALDVEEDRKLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q3</accession>
    <name>A0A2M9P6Q3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22440</name>
        <name evidence="2" type="ORF">CNY89_25080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003017">
        <property type="protein sequence ID" value="PJN92950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002289">
        <property type="protein sequence ID" value="PJN93244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="11416" checksum="48609E8FD8FE1CF0" modified="2018-04-25" version="1" fragment="single">MLYAFVFRRLTYKWPIFLFAMLIATGLYFLLDSFDVVDYITSKIMFSQASGESRSIHFVYGFQELMRNPFFGVGLSDWRRPYWTSSATDSYWLALF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U4</accession>
    <name>A0A2M9P6U4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002211">
        <property type="protein sequence ID" value="PJN93276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9601" checksum="98F8238C7277BF26" modified="2018-04-25" version="1" fragment="single">PGSPSAAQSRGAVSPPQIVQTPTTSGANSTGIIRNNVQPPKDSLGHNDIDRITRSGTTNSQDGLTRSGNRRSNTEVPAGWVMPKVGPYAYLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X9</accession>
    <name>A0A2M9P6X9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002172">
        <property type="protein sequence ID" value="PJN93287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13051" checksum="FDD2EAF03431F348" modified="2018-04-25" version="1" fragment="single">GVLVVLSSGPRETTLRNPHLTLAKPLKDRDPTSRTGPDVICFSHLRWDFVLQRPQHLMQRFAHTSRVFFVEEIIPTDHHLPYLEFHAFEGTSVTAVRHACLITPTCAARDAAGRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C0</accession>
    <name>A0A2M9P7C0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001951">
        <property type="protein sequence ID" value="PJN93410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6859" checksum="A98D2D2CB56844F6" modified="2018-04-25" version="1" fragment="single">MVIRDNTVAYDSNQIVNQIPLIDVSPSSRNVDIGENTVYGVDAGHENATVFLVANQAELQTALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E6</accession>
    <name>A0A2M9P7E6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001877">
        <property type="protein sequence ID" value="PJN93453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7548" checksum="EA12B56096A82A74" modified="2018-04-25" version="1" fragment="single">AGLRPDLPEAERLALYSGHSLRAGLASHAEVPEAAVQKHLGHASAEMTRRYQRRRDRYRVNLTKAAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F6</accession>
    <name>A0A2M9P7F6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CopG family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20400</name>
        <name evidence="2" type="ORF">CNY89_29650</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004498">
        <property type="protein sequence ID" value="PJN92445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001820">
        <property type="protein sequence ID" value="PJN93494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4434" checksum="3B47C363B048A6CB" modified="2018-04-25" version="1" fragment="single">RSLDRPLSQGERNGIPLLSPRPGSPPITLDLVNRLRDETP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K5</accession>
    <name>A0A2M9P7K5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001792">
        <property type="protein sequence ID" value="PJN93513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8884" checksum="EA60B2789030E734" modified="2018-04-25" version="1">MPPEEVKPPTDDREFRDFLNQEYQAYLLAMQDYLNCLGREHESATKEINEIMARWMLWFGDDAKIHSNSPEPARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W2</accession>
    <name>A0A2M9P7W2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001680">
        <property type="protein sequence ID" value="PJN93590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11543" checksum="29D746062CF720A0" modified="2018-04-25" version="1">MVRTGKQSGTLFIPGREPLHLAGNDQLTIFERLVVAAAKGSPDVQVKALMEGFESRSPQQAFRKETWDSIRDVYIGKGAKNGYWRLLLTAQPTEAVAEPAEEATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X5</accession>
    <name>A0A2M9P7X5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001599">
        <property type="protein sequence ID" value="PJN93651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6761" checksum="9EE2AA24CAF39B0C" modified="2018-04-25" version="1">MNAPIQQIQHVDVAGTGFTVLDRIYADGSLTDESLGGSCGNVLLSLAMLNRQVAPVLFARRRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P880</accession>
    <name>A0A2M9P880_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18615</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001486">
        <property type="protein sequence ID" value="PJN93754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="51"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7475" checksum="8F22DEE4730B85F9" modified="2018-04-25" version="1">MARRREVGAAHRAPEPPILAKIMTDFDIATPLAAALASKGYDSLTPVQQAVLTPRTPGPSHRSHQSAGWC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P885</accession>
    <name>A0A2M9P885_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001519">
        <property type="protein sequence ID" value="PJN93720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008866">
        <property type="entry name" value="Phage_lambda_GpA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05876">
        <property type="entry name" value="Terminase_GpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18828" checksum="7413011B88F40E16" modified="2018-04-25" version="1" fragment="single">FVDATEGGKRLRRGARLWTVAVSTFKAETYRFLRLDRPTEEDLAEGAAFPPGSVHLPHWVENEWLKQFVAEQLVTVRTKRGFARLEWQKLRERNEALDCRVYARAAAWIAGADRWTDEKWRDLEDQLGVDDASADPAGQINRQAQTSQGKRRSDWLGRRGGWF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C0</accession>
    <name>A0A2M9P8C0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate ammonia-lyase</fullName>
            <ecNumber evidence="2">4.3.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">aspA</name>
        <name evidence="2" type="ORF">CNY89_18430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.1" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001457">
        <property type="protein sequence ID" value="PJN93784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008797">
        <property type="term" value="F:aspartate ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lyase_1" evidence="1">
        <location>
            <begin position="14"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7431" checksum="321FD03C87247075" modified="2018-04-25" version="1" fragment="single">MTAPDTRLEHDLLGDREVPASAYWGVHTLRAVENFAITGQTVSTAPDLIAALAAIKEAAAEANADLGLLSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J3</accession>
    <name>A0A2M9P8J3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001409">
        <property type="protein sequence ID" value="PJN93843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014158">
        <property type="entry name" value="T4SS_VirB5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023220">
        <property type="entry name" value="T4SS_VirB5-domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07996">
        <property type="entry name" value="T4SS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="22841" checksum="7A4416383E46C110" modified="2018-04-25" version="1" fragment="single">PVARAAAQGVPVFDATSVAKLIEQIATQAEQLATMKTQLESLTGARGIGAFLNAPEDVAARAAATNLNGIVDGAITGSPILGNTARLASAIERLKGNYQLDLLGPYASSDIVQYRALANLGGSSLAAMATGEDSYSRANEAMTRVNRLVPQIDANTDVKAAIDFNTRVQIEQMQVMNELLRVLSAQANATGAQALFMTREQMASREFMKVNGTGGATP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K6</accession>
    <name>A0A2M9P8K6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF4167 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17935</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001391">
        <property type="protein sequence ID" value="PJN93864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025430">
        <property type="entry name" value="DUF4167"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13763">
        <property type="entry name" value="DUF4167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4167" evidence="2">
        <location>
            <begin position="25"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="90"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="103"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15625" checksum="BE9B17918D182210" modified="2018-04-25" version="1" fragment="single">MRPSNKSRSRSKPSNMGGGNPNSGGGNPNNRQRLGNIVNRVFESAGPDGKVRGTPQQIIDKYQALARDAQLSGDRVAEQSFLQHSEHYTRMLGEAQASQESARQNYERDDRSEDRREDGQRGEGQRAEGQRNEGQRDGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L2</accession>
    <name>A0A2M9P8L2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001388">
        <property type="protein sequence ID" value="PJN93868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8091" checksum="715FD7D929A3FFD2" modified="2018-04-25" version="1" fragment="single">MTVLLGVLRRLRPQLIALAVVLGLIGFIAPGFFDLSFRDGRLYGSLIDVGVRAAPVALLAIGMTLVIATRGIDLSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T6</accession>
    <name>A0A2M9P8T6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptide ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17375</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001315">
        <property type="protein sequence ID" value="PJN93950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857792" evidence="2">
        <location>
            <begin position="23"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="3">
        <location>
            <begin position="71"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="17935" checksum="E7B037CC5FF39051" modified="2018-04-25" version="1" fragment="single">MNTRRMLMGATALALTAGAAQAERGSDGQVNILYWQAISIMTPFLSNGTKDIEAASLVLEPLARFDETGQLVPYLAAEIPTLENGGVSEDLTSITWKLKDGLLWSDGTPVTAEDAIFTWKYCTDPEGGCAQEPYFADVTAMEAVDPQTLKITFAVPKPYPYGPLVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P940</accession>
    <name>A0A2M9P940_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16705</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001226">
        <property type="protein sequence ID" value="PJN94068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004046">
        <property type="entry name" value="GST_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14497">
        <property type="entry name" value="GST_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="83"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="221" mass="25611" checksum="BFAFAB18E3DC0C9D" modified="2018-04-25" version="1">MRRLYHQPLSPFCRKIRLVLAEKSIEVELVDEKPWERRMDFLRMNPAGQVPVLKIDDLVLADSGAIFEYLEETQPEPPLLPADPAMRAEARRLAAWFDDKFHREVTANLLYERVNKKLSKSGYPESERIKAGLKNIRYHLDYIGWLMDHRRWLAGNQMTIADFAAAAQLSCLDYVGDVDWARNEGLHNWYAKIKSRPAFRSILADLVPGFTPPAHYADLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P989</accession>
    <name>A0A2M9P989_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Rhodanese domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001219">
        <property type="protein sequence ID" value="PJN94079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018634">
        <property type="entry name" value="Chromate_resist"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09828">
        <property type="entry name" value="Chrome_Resist"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rhodanese" evidence="1">
        <location>
            <begin position="24"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="296" mass="32048" checksum="51A55B89EE705F50" modified="2018-04-25" version="1" fragment="single">MPAPDAITHDRLAKLIGTPRCPALLDVRPDADRSDDRRLIPGARLLGPDALMSDGLAAVAGSLAGPAVVICTAGHRRSQGAAAMLRACDAAAEYLEGGHAAWVAAGLPLVDTTQITARDDQGRSVWVTRSRPKIDRIACPWLIRRFVDPRAVFLFVAPAEVAGVGALLDAMPFDIEEAFWSHRGDRCTFDTMIAEFGLAIPALDRLATIIRGADTARLDLAPEAPGLLAASLGLSRMYADDLEQLEAGMALYDAFYRWARDATKAASTRSRMTSIVSSWTRILMRALYLLSRRPKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A3</accession>
    <name>A0A2M9P9A3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001181">
        <property type="protein sequence ID" value="PJN94127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="11942" checksum="79E1D66369F4F9CF" modified="2018-04-25" version="1" fragment="single">AEPGFITMNLPMLLDTLDEVGIQNPIVCANINKIGFRLSGGIEGYLDTLKKRQVRAIAMSVFASGAIAPREAIDWIAAQEGIESIVFGASSRKNIRDTKMLVDAAYGTATAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E0</accession>
    <name>A0A2M9P9E0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type IV secretion system protein VirD4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001166">
        <property type="protein sequence ID" value="PJN94153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="355" mass="38882" checksum="053120014F1719E0" modified="2018-04-25" version="1" fragment="single">RWAEPCELRRAGLLARRVEEVRGPIWGKLGSPKSRAPYLSSEKIVHSLVAAPTGAGKGVGVVIPTLLTYPGSTVVLDVKGENYEKTAGRRHELGDRVFKFAPYAKDRRSHRYNPFDEVAAAPERRRFSEALRLANSLVEAKGKGTESWVDGAREIFAATAVVAHERGTPTIAAVYDLLTEAGAPGQLLEGLAESTQSGEARSVFNRFAGQPEKVLGSYMSVLFDGGLRLWADPDVRDATAATDFWITDFRSDPASVFLCVSQKDLGVLSPLIRLMFQQMFTLLQETDRTEADRFDVLFLLDEFASLGKMQEMGRAITTVRSSGAHLMLIVQSLANLREVYGADGAANFLGNCELQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L0</accession>
    <name>A0A2M9P9L0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001119">
        <property type="protein sequence ID" value="PJN94220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3734" checksum="718E5914F76B40E7" modified="2018-04-25" version="1" fragment="single">MRGWLLCRMAGLDFEERSIDLDLGARQELLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y2</accession>
    <name>A0A2M9P9Y2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001036">
        <property type="protein sequence ID" value="PJN94344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045502">
        <property type="entry name" value="DUF6489"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20099">
        <property type="entry name" value="DUF6489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9271" checksum="50B1DC18E3DE5D25" modified="2018-04-25" version="1">MKITVDVDCTPEEARHFLGLPDVKPMQDHLMKEMQDRMSANLRAMQPEEMMRTWLPANLKGMEQMFEAFLRMGSGAAKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA07</accession>
    <name>A0A2M9PA07_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001032">
        <property type="protein sequence ID" value="PJN94351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7805" checksum="A2FED2E39CA65CEA" modified="2018-04-25" version="1">MRWHPHGYGGQRRDPEQVKREGWREQGVLAVSADDDRLTWPERELVRQLGEKLYGPRPSDREARHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA08</accession>
    <name>A0A2M9PA08_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ</fullName>
            <ecNumber evidence="9">4.2.1.59</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase</fullName>
            <shortName evidence="9">(3R)-hydroxymyristoyl-ACP dehydrase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Beta-hydroxyacyl-ACP dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">fabZ</name>
        <name evidence="10" type="ORF">CNY89_14875</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a (3R)-hydroxyacyl-[ACP] = a (2E)-enoyl-[ACP] + H2O</text>
            <dbReference type="Rhea" id="RHEA:13097"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9945"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78827"/>
            <dbReference type="EC" id="4.2.1.59"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the thioester dehydratase family. FabZ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.59" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01001017">
        <property type="protein sequence ID" value="PJN94376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008659">
        <property type="term" value="F:(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008693">
        <property type="term" value="F:3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047451">
        <property type="term" value="F:3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004317">
        <property type="term" value="F:3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00406">
        <property type="entry name" value="FabZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013114">
        <property type="entry name" value="FabA_FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010084">
        <property type="entry name" value="FabZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30272">
        <property type="entry name" value="PTHR30272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07977">
        <property type="entry name" value="FabA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01750">
        <property type="entry name" value="fabZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="4 9" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="9">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="161" mass="17859" checksum="F5D1DC98DFD7BB3C" modified="2018-04-25" version="1">MALIIDPDLPQADVLTIKRMIPHRYPFLLIDRVVNMAVGVSAVGLKMVTCNEPHFEGHFPVRPIMPGVMIVEAMAQTSAVLVVQTLDMIDKDPLVYFMSIEEAKFRNPVTPGDRLELHVAVQRGRGKVWKFAGQARVDDRIAAEATFTAMIIPPDEKQPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA46</accession>
    <name>A0A2M9PA46_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gamma-glutamylcyclotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001010">
        <property type="protein sequence ID" value="PJN94391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003839">
        <property type="term" value="F:gamma-glutamylcyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006751">
        <property type="term" value="P:glutathione catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006840">
        <property type="entry name" value="ChaC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04752">
        <property type="entry name" value="ChaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13786" checksum="20D1871BC045255B" modified="2018-04-25" version="1" fragment="single">AAGGSCAGLAYRLDPATQEADLVELVRRETPFHELAHNARWINAATPEGPIRALTFYASPVGVPVRRMSDEETAAWIARACGHAGSCAEYLYNTVAHLESEGIHDRHLWRLQQLVAEEIAGWGPAGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA78</accession>
    <name>A0A2M9PA78_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000975">
        <property type="protein sequence ID" value="PJN94440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14374" checksum="E72361309F125E64" modified="2018-04-25" version="1" fragment="single">GHNDRHGVSLETEERRTAYLEFFCTAVFGEEGPFRIVHPSTPLERTGNNEAPIDPDKIVPLRPIAATKQGDRGIECTVSYGRTLFTAEFVVDAEGTVVMVDDSQILDMVAIKPELQFEGSRRRLLAEVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ8</accession>
    <name>A0A2M9PAJ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutathione S-transferase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000904">
        <property type="protein sequence ID" value="PJN94566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13417">
        <property type="entry name" value="GST_N_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11819" checksum="93EBD98AA6D27A37" modified="2018-04-25" version="1" fragment="single">MLALLYTTGSPFARAVRIVLDEIGLDYERHEKIAAPSSGQLAPPTLQVPTFWDGDLKLWDSGTIVEYLLSTFPQRPAVEPPLANQAFRANALWRDKLVFSTIQTFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM3</accession>
    <name>A0A2M9PAM3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000885">
        <property type="protein sequence ID" value="PJN94593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011109">
        <property type="entry name" value="DNA_bind_recombinase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07508">
        <property type="entry name" value="Recombinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Recombinase" evidence="1">
        <location>
            <begin position="36"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8405" checksum="22C8A8414B017A8A" modified="2018-04-25" version="1" fragment="single">AGKGAVALRAAVSANADRHAQDLALVVADIRSGGATSLRAIAAELNDRGMLTRRGGRWHVSTVQNLLDRLGLREAACASRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM7</accession>
    <name>A0A2M9PAM7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Response regulatory domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13730</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000902">
        <property type="protein sequence ID" value="PJN94571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="2"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13551" checksum="8AF97FA15C6DA882" modified="2018-04-25" version="1" fragment="single">MQVLIVESNRDLARIWSGFLARQGMTCVLAEAGAEAYAALRAGDFDALVLDMELPEGEALRVADFATYRNPDIPIIAVTARGFFSDGAIFELIPNARGLLRAPLRPEDMAALVEHYAARSAADAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR3</accession>
    <name>A0A2M9PAR3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ribose-phosphate pyrophosphokinase</fullName>
            <shortName evidence="6">RPPK</shortName>
            <ecNumber evidence="6">2.7.6.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">5-phospho-D-ribosyl alpha-1-diphosphate</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phosphoribosyl diphosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Phosphoribosyl pyrophosphate synthase</fullName>
            <shortName evidence="6">P-Rib-PP synthase</shortName>
            <shortName evidence="6">PRPP synthase</shortName>
            <shortName evidence="6">PRPPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">prs</name>
        <name evidence="8" type="ORF">CNY89_13500</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>ATP + D-ribose 5-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + AMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:15609"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.6.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="6">Binds 2 Mg(2+) ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route I): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.1" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000877">
        <property type="protein sequence ID" value="PJN94609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00087">
        <property type="reaction ID" value="UER00172"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004749">
        <property type="term" value="F:ribose phosphate diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006015">
        <property type="term" value="P:5-phosphoribose 1-diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009165">
        <property type="term" value="P:nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009156">
        <property type="term" value="P:ribonucleoside monophosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00583_B">
        <property type="entry name" value="RibP_PPkinase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000842">
        <property type="entry name" value="PRib_PP_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029099">
        <property type="entry name" value="Pribosyltran_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005946">
        <property type="entry name" value="Rib-P_diPkinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037515">
        <property type="entry name" value="Rib-P_diPkinase_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10210">
        <property type="entry name" value="PTHR10210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14572">
        <property type="entry name" value="Pribosyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13793">
        <property type="entry name" value="Pribosyltran_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01251">
        <property type="entry name" value="ribP_PPkin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00114">
        <property type="entry name" value="PRPP_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran_N" evidence="7">
        <location>
            <begin position="8"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="region of interest" description="Ribose-5-phosphate binding" evidence="6">
        <location>
            <begin position="233"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="46"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="105"/>
            <end position="106"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="205"/>
        </location>
        <ligand>
            <name>D-ribose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>D-ribose 5-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="339" mass="37006" checksum="20076F0B8CA42C16" modified="2018-04-25" version="1">MNPLFRPKLIAGNSNKPLATAIARRISIHRGETVELVKTRVERFNDQEIFVEVFENVRGEDMFIIQSTSNPANDNLMELLIMCDALRRSSASRITAVMPYFGYARQDRRAKARTPISAKLVANLLTEAGIERVLTLDLHAAQIQGFFDIPVDNLYTAPVFALDIRHQFESLRDVTIVSPDVGGVARARELAERIDAELAIVDKRRSAPGEIASMTVIGDVRDRVCIIVDDICDTAGTLVKAAELLADHGAREVHAYITHGVLSGPAVERITNSAMKSLVITDSIDPTPAVRGAHNIRVVPVAPLFGQAILNISNGTSVSSLFDSKTLAPIYEALYPNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR8</accession>
    <name>A0A2M9PAR8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">[protein-PII] uridylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000863">
        <property type="protein sequence ID" value="PJN94630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008773">
        <property type="term" value="F:[protein-PII] uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00277">
        <property type="entry name" value="PII_uridylyl_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013546">
        <property type="entry name" value="PII_UdlTrfase/GS_AdlTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010043">
        <property type="entry name" value="UTase/UR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47320">
        <property type="entry name" value="PTHR47320"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08335">
        <property type="entry name" value="GlnD_UR_UTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GlnD_UR_UTase" evidence="2">
        <location>
            <begin position="157"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="457"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="457" mass="51621" checksum="2D582260A234F8FE" modified="2018-04-25" version="1" fragment="single">IAAAVEANPRAAHRAIHDYCWLTDRIVKLTLDFALEWLHPLPNPTSTERVSVVAVGGFGRAEMAPFSDVDLLFLTPYKQTAWGESLIESVLYCLWDLRLKVGHSARTVDDCLRQAKADVTIRTSLLENRYLWGDAGLARSLNERLWSELFVSTGPEFLELKLAERAERHSRQGSTRYLLEPNIKEGKGGLRDLQTLFWIAKYIYRADSTADLVAQGVFTAEEYAIFSEAEAFLWMTRVHLHLLTGRATEQLTFDTQVEIAAILGYEATPGQRPVERYMQAYFTQAKNVGDLTRIFLATLEARHVRPRPSIARRLRGVLTKGKEGDPGKGYRLQAGRLDVIDPQAFLADPVNILRLFEKGLALGVFIHPDALRMVAANLNLIDDALRDDPEANRIFLSLLTSQNNPERALRLMNEVGVLGAFIPEFGRVVAMMQFNMYHHYTVDEHTIRTISTLSQIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ2</accession>
    <name>A0A2M9PAZ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000818">
        <property type="protein sequence ID" value="PJN94707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="7"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="385" mass="39262" checksum="352EAF30DFA9577A" modified="2018-04-25" version="1" fragment="single">MSVRKFRLTDAALITPFATLIRGTPGPDDLEALADGDGVYGLGGDDRLFSAYNLTRLNGGADDDEVTTDLTHAGSAGATNRAEALQYGEAGDDTLSGRIRLAALDPEDPFHSVTAILRQSGGDGDDTMTAEIVSLGTASGFFNAVLSGGAGDDVITSFLRGPAGAADATMLNRIDGGTGADLISADVYSSGGFFAGFAENRVSADAGDDQVDATAVAEGVGVATALNSVFAGAGDDHVHAETTAGTNVGRTLQANSVWGGDGRDDIDVGHFFGLNAFSDIDNLVWGGAGSDTILAAIDHRPGYEQYRLDALNDLSGGSGNDSLHARIRANVYTDFTLENRLSGGGGADVLRSEIVVTFESGEDNVLSSRGALRGGAGDDVLTAVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB09</accession>
    <name>A0A2M9PB09_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12780</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the pirin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000807">
        <property type="protein sequence ID" value="PJN94726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012093">
        <property type="entry name" value="Pirin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008778">
        <property type="entry name" value="Pirin_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003829">
        <property type="entry name" value="Pirin_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13903">
        <property type="entry name" value="PTHR13903"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02678">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05726">
        <property type="entry name" value="Pirin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006232">
        <property type="entry name" value="Pirin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pirin" evidence="3">
        <location>
            <begin position="34"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="Pirin_C" evidence="4">
        <location>
            <begin position="192"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003457"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF05726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="310" mass="33914" checksum="0096D8D0AC9CB95D" modified="2018-04-25" version="1">MSWNPTADPVCPVGAEADLIETLIVPRARDIGGFEVRRALPAPRRQMVGPFIFFDEMGPAEFVTGAGIDVRPHPHIGLATVTYLFKGEFQHRDSLGSNQMIRPGEVNWMVSGRGVTHSERTSLETRRRPHELFGIQTWVALPEAAEEAEASFEHQGAEALPLIEDGGVSLRLVLGSGWGERAPVKVFSETFYAHAELAPGARMPLPDDHEDRGLYVVSGSIEVAGQVFEANRMMVFRPGDRIAVKAGPQGARIMALGGATLGGPRYVWWNFVASSQEKIEAAKAAWKEGDWEHGRFQLPPGDDAEFIPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB26</accession>
    <name>A0A2M9PB26_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glycine dehydrogenase (aminomethyl-transferring)</fullName>
            <ecNumber evidence="2">1.4.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12690</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(R)-N(6)-lipoyl-L-lysyl-[glycine-cleavage complex H protein] + glycine + H(+) = (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[glycine-cleavage complex H protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:24304"/>
            <dbReference type="Rhea" id="RHEA-COMP:10494"/>
            <dbReference type="Rhea" id="RHEA-COMP:10495"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="1.4.4.2"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.4.4.2" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000799">
        <property type="protein sequence ID" value="PJN94740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004375">
        <property type="term" value="F:glycine dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006546">
        <property type="term" value="P:glycine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00613">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020581">
        <property type="entry name" value="GDC_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11773">
        <property type="entry name" value="PTHR11773"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02347">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="432" mass="46342" checksum="9D973E77ABF3AAF7" modified="2018-04-25" version="1" fragment="single">MAFQETDYHPYDFANRRHIGPSPAEIAAMLAVVGASSLDGLIDETVPADIRAAPLAFGPALSEQGALHRLRVVASKNKVLTSLIGQGYYGTVTPPVILRNIFENPAWYTAYTPYQPEISQGRLEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAMALAERAAKSKAKAFFVDRDCHPQTIEVIETRAQPLGWEVIVGDPFADLDPTAVFGAIFQYPGTYGHCHDFSGPIAALHEAGALACLAADPLALTLLTPPGEMGADVAIGSTQRFGVPIGFGGPHAAYMAVRDGLKRAMPGRIVGVSIDARGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPTGLKAIAQRIHRKTVRMAKGLESLGFTVEPERFFDTITVEVGALQGVILKAAVAEGINLRKIGATRIGISVDERTRREHT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB33</accession>
    <name>A0A2M9PB33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000804">
        <property type="protein sequence ID" value="PJN94732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008866">
        <property type="entry name" value="Phage_lambda_GpA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05876">
        <property type="entry name" value="Terminase_GpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="30867" checksum="3601B443E23BFB37" modified="2018-04-25" version="1" fragment="single">MYVPTSTNSPRSGPTSDDDDGLTDFDGAGEILRAWGSGLRPDPDLTVSEWADRHRMLSGRASAEPGRYRTVRTPYMREIMDRLSPGDPTQRVVFMKAAQVGATEAGNNWIGFAIHQAPGPMLAVQPTVDLAKRNSRQRIDPLIDESPELRERVKPARSRDAGNTMLSKEFAGGILIMTGANSAVGLRSTPARYIFLDEVDAYPASADEEGDPVTLAEARSLTFAHRRKVLLVSTPTIRGLSRIEREYEASDQRRYFVPCPHCGHAQWLKFDRLRWQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB82</accession>
    <name>A0A2M9PB82_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000768">
        <property type="protein sequence ID" value="PJN94793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="33662" checksum="EF66F7A3A8EAE54B" modified="2018-04-25" version="1">MLDVRFVPVNRSWHQERIAGRKSQIARMGGSGDQKARARLESEIAGYREAEALVPDLDAYARYFRARADSDPGVRLVADLTPDYALLGAKDWAEVRETLERHGFTPKILFLMRDPVSRLESIWRMTARDDAGKALRGASLWTRAAHKALARARHVAAKLGLQASGGKFAAFAVTPPNLQRSQFETTIAAVESVFPASQVHYDFYETLFTPEAMTDLMEFLDLPLRPANFAERVNASPLQVPLAASERASVARMLEPTYRFCAARFGAERIQKIWRNAPELTRGIEAGSAQASLGRKAGDELAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB93</accession>
    <name>A0A2M9PB93_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent Clp protease adapter protein ClpS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1 4" type="primary">clpS</name>
        <name evidence="4" type="ORF">CNY89_12360</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Binds to the N-terminal domain of the chaperone ClpA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ClpS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000767">
        <property type="protein sequence ID" value="PJN94795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00302">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022935">
        <property type="entry name" value="ClpS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003769">
        <property type="entry name" value="ClpS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33473">
        <property type="entry name" value="PTHR33473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02617">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0645">Protease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ClpS" evidence="3">
        <location>
            <begin position="18"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="78"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11830" checksum="9022BC48DC7D7C09" modified="2018-04-25" version="1">MTDIELKPKGVTETRPARPPLYRVLLVNDDFTPREFVVRVLRMVFRLNADQARAVMLAAHQRGVCVVAIYTRDVAETKADQANDAGRQEGYPLTFRIEPESGGGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD0</accession>
    <name>A0A2M9PBD0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNase_J_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000736">
        <property type="protein sequence ID" value="PJN94843.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041636">
        <property type="entry name" value="RNase_J_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17770">
        <property type="entry name" value="RNase_J_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase_J_C" evidence="1">
        <location>
            <begin position="10"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94843.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7619" checksum="620E5756289514B9" modified="2018-04-25" version="1">MAEPKRLRDGLSGAIESDIDRELLKMKRAALADDEEVEDAITRIVARVCNDRIGKKPMVTVLISRLEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD5</accession>
    <name>A0A2M9PBD5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000739">
        <property type="protein sequence ID" value="PJN94839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2090.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027463">
        <property type="entry name" value="AcrB_DN_DC_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001036">
        <property type="entry name" value="Acrflvin-R"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32063">
        <property type="entry name" value="PTHR32063"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00873">
        <property type="entry name" value="ACR_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00702">
        <property type="entry name" value="ACRIFLAVINRP"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="312"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="517"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="517" mass="55344" checksum="22FA147C4903B506" modified="2018-04-25" version="1" fragment="single">SQTNANLGSGRGEIGGQEQAIGTLGDAASAESLAQTTIALPSGRFVRLGELGAVIDTFEEPRSFARFDGDPVVVFAVYRAKGASEVSVAETVNAVLDGVRAERPDVRIDLVDDTVFYTYGNYEAALHTLFEGAFLAVLVVLAFLRNWRATLITAVALPLSAIPTFWLMDLLGFSLNLVSFLAITLATGILVDDAIVEIENIARHIRMGKTPYRAAIDAADEIGLAVIATTLTIVAVFVPVSFMPGIPGQYFRQFGLTVAIAVLFSLLVARLITPMMAAYLMRSSDAHAEEARDGVLMRGYLGLVRQTLKARYLTMLAAIGVLAVSLYFLAQIPGSFIPPEDVSRIPISLELPPGATLAETDATAVEVQARLGDVEGVSNVFVLGGVSPVGDLDIRRASVTVVLDRLDHSLLRKSVEALRALPLIGGMIPEPPPNGRIRTQSDIEAEVFARIAEIPDLRSFKLNDRGERDLSFSILADSEADLSEGVRRLEEALRGDPLLANVAAEGRPAPAPEIRGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL7</accession>
    <name>A0A2M9PBL7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_11520</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000691">
        <property type="protein sequence ID" value="PJN94928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="7"/>
            <end position="186"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="39"/>
            <end position="46"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20328" checksum="FD22A9C0156DB78C" modified="2018-04-25" version="1" fragment="single">MSPPNRIELREVTKAFPGVLANDRVSFAVKPGEIHALLGENGAGKSTLVKMIYGILQPDGGAIVWDGAPATVANPRAARAMGVGMVFQHFSLFEAMTVFENIALGLDEKLSRKALAIRINEVMRQYGLTLDPARVVSTLSVGERQRIEIVRALLLKPKLLIMDEPTSVLTPQEVALLFRTLRQLAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM5</accession>
    <name>A0A2M9PBM5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exopolyphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000681">
        <property type="protein sequence ID" value="PJN94946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="2">
        <location>
            <begin position="46"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="372" mass="40267" checksum="6F95A75F50984DBB" modified="2018-04-25" version="1">MAQDLTEAAQEAEERASRRRGIEPAQAEPELFAALDLGTNSCRMLIAAPDGGHFRIVDAFAKSVRLGMGLERTGHLSRGAIGRTLQALDICADKLRRYGVKNTRLVATEACRRARNGSHFLSQVTRETGLKLEVIRPEEEARLAVISCAPLVAPEAEQVLVFDIGGGSTELVWIDLAAVAPEARAQAIVNLKVKGGDPGHGEARIVDFISVPLGVATLHERFADVCDDGARFALMSWYFEEQLAGFKPYLDLPDSEGFQMIGTSGTVTTVGAAHLGLRRYDRRKVDGMNLSTAAIDAVIQRFLRLGPAGRRNDAGLGRDRCELIMSGAAILQTLLRLWPTESIRVADRGLREGMLFSMMSAKGVFLPGAGTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT9</accession>
    <name>A0A2M9PBT9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed DNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_11210</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000665">
        <property type="protein sequence ID" value="PJN94979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006054">
        <property type="entry name" value="DnaQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013520">
        <property type="entry name" value="Exonuclease_RNaseT/DNA_pol3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00929">
        <property type="entry name" value="RNase_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00479">
        <property type="entry name" value="EXOIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00573">
        <property type="entry name" value="dnaq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Exonuclease" evidence="5">
        <location>
            <begin position="223"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00026073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="423" mass="46610" checksum="96092A212E5768BA" modified="2018-04-25" version="1" fragment="single">TMAAFPDMAPADRGAFERVVLDESARITTRLDELGAEIRGHMLGRWPMADIYAPDLVKLLEADLAEDGVRVTLVGLPLWLHGDSLSLIQAMEFLVRRVHEATGAVEIEVEPMLGDKRVYLDLQWRGDPIPAGTLEGWMDRPCSTEMAELRLRDVLERHGSEPWSKAAGEGRGMLRLPLLAPQRPQFLPQARRPPPRPEFYDFGLMRAHQGDETLAKRKLRDLEFVVFDCEMTGLQPMQGDEIIQIGAVRVVQGRILTGEGFERLVNPGRPIPPASIKFHGLTDADVAEKPGIREVLPEFRAFAGDAVLVGHNAAFDMKFLSLKEKAAGVRFDNPVLDTMLVSSTLDGGEEDQSLDGLCARYGIAILGRHTALGDTIATAELLLRLIDRLEAQGLSTFGEVMRASNMAAELRQRGEIVARGVGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV9</accession>
    <name>A0A2M9PBV9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000655">
        <property type="protein sequence ID" value="PJN94999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9032" checksum="426CF904BC80AEF6" modified="2018-04-25" version="1">MGISCQQTFPKQDACPLMVSPLLASIKFLGPASGSFGRPGGAGRRTTGADFAHLRRPTFAAARRIGGKGSRSEAAGVQKSVTEVEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW3</accession>
    <name>A0A2M9PBW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000640">
        <property type="protein sequence ID" value="PJN95033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="24" mass="2638" checksum="FF3D670C3F2133B9" modified="2018-04-25" version="1" fragment="single">MESIDAITALSALAQSTRLETFRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC06</accession>
    <name>A0A2M9PC06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acetylornithine deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000626">
        <property type="protein sequence ID" value="PJN95058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5209" checksum="0EF0383FFFC441C7" modified="2018-04-25" version="1" fragment="single">LFQAAGVPAIICGPGSIARAHRPDEHVLPAELEDCRTMLLRLGAELSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC07</accession>
    <name>A0A2M9PC07_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000640">
        <property type="protein sequence ID" value="PJN95032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026325">
        <property type="entry name" value="DUF932"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06067">
        <property type="entry name" value="DUF932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15580" checksum="98C1E5F752916CA6" modified="2018-04-25" version="1" fragment="single">MGFYNFNRFTRGMSVGSQILGRGEALTDDQLRAAVPSIFATEAHESRSARFTPIPTIKVLDGLRAEGFAPFGAQQARTRVEGKAEHTKHLLRLRHRSLANATGEAFEIVLVNANDGTSAYQMIPGFFRMVCANGLMTGETFN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC21</accession>
    <name>A0A2M9PC21_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000609">
        <property type="protein sequence ID" value="PJN95096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="48"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="26252" checksum="59D38792B2C3ABA9" modified="2018-04-25" version="1">MFMPPLMTDWYMPGKHDYAGLSLENAERVWDAVPMAKGDKKPKHVSALAHWRKARGLSQGQLGEKAGIDQPSVSRFELGTRRPSIGQTMALAEALGIDPRELLPSRSTDQATGRALSGAVTPAAPNVLQRLAESIASVASRPGFDLWQVRDRSMQTAGYLPGDFMLVRELGDEGADILHVGDAVIAQVLSPVSGEAETVFRRFDPPFLMPSSLDPEDKPVLGIDAQIRGKVVASWRLPEMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC56</accession>
    <name>A0A2M9PC56_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000608">
        <property type="protein sequence ID" value="PJN95098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7116" checksum="268BC0EC0F8DDD14" modified="2018-04-25" version="1" fragment="single">MKLVIVETDGRGGLIHFAYQLAEAFAEIGVETTLLTAADYELADLPHRARVAPILRLWPRVETP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC88</accession>
    <name>A0A2M9PC88_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000594">
        <property type="protein sequence ID" value="PJN95122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036206">
        <property type="entry name" value="ThiamineP_synth_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51391">
        <property type="entry name" value="SSF51391"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8097" checksum="E98FE9D290FF90CF" modified="2018-04-25" version="1" fragment="single">MSEQGAQAQLYLVTPPILSLEPFGEVLAELLDAVEVACVRLALASSDEDELMRAADGLRAICRGPGRAAGRGGAFPAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL2</accession>
    <name>A0A2M9PCL2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000517">
        <property type="protein sequence ID" value="PJN95285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14291" checksum="EFFF578442D23C0A" modified="2018-04-25" version="1" fragment="single">MNDVYAAELQASLLLFDNGQSKAALESARYSVASGRASLLNVEQEVLFAAITAYMDVIQAQEFVRIARNDVKVLGEQLDATNNRFEVGEVTRTDVSQTEARLAQSRANLVDSQGALQIARQDYLAAVGVLPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP5</accession>
    <name>A0A2M9PCP5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_09225</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000506">
        <property type="protein sequence ID" value="PJN95315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="30"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="138"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="171"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="253"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="287"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="33"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="403" mass="43037" checksum="F80496709D9645FF" modified="2018-04-25" version="1" fragment="single">MVEVVGLDRAKSKAVGPLKSLVRFLAPYRWLVWGALAALTVTAGLSLALPLAVRRVVDGFGIENLALMDAYFGAALAIAAALAVGTALRFYLVTRLGERVVFDIRKAVYDKVIGMSPGFYERIMTGEVLSRLTTDTTVVLSVVGSSVSIALRNILTLFGGLGLLFWTSAKLTGLVLIGVPLVIVPILALGRRLRALSRESQDRIAEGSAQAQETLLAAQTVQAYTSEDASRARYGALAEAGFETAKRRILARAVLTAIVIFLVFASVVVVLWMGARDVRGGIMTPGELVQFVIYAVMVAGSAAALSEIWSELLRAAGATERLVELLDAVDTLEDPVNPVPLPARAAGEIRFEDVTFRYPARPETAALADLSFTVRPGETVALVGPSGAGKSTIFQLLMRFFDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU6</accession>
    <name>A0A2M9PCU6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cation transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_08940</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000485">
        <property type="protein sequence ID" value="PJN95360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="79"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10727" checksum="C9B6E0B5385C78F7" modified="2018-04-25" version="1" fragment="single">MDEQGYLTLSLAATLCVAAFGILMGLVSGSSAIVFDGVYSLADAGMTLLALFVSHLILRSTAQGQASKRLGERFNMGLWHLEPLVIAIDGLMLMSIAVYAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX2</accession>
    <name>A0A2M9PCX2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA mismatch repair protein MutS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000482">
        <property type="protein sequence ID" value="PJN95368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002625">
        <property type="entry name" value="Smr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036063">
        <property type="entry name" value="Smr_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01713">
        <property type="entry name" value="Smr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00463">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160443">
        <property type="entry name" value="SSF160443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50828">
        <property type="entry name" value="SMR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Smr" evidence="1">
        <location>
            <begin position="50"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15837" checksum="00E74FA7DAD13791" modified="2018-04-25" version="1" fragment="single">ATIPRRRESPRVTLDLAPDPHAAHDRAHPHMDRRRFEKLRRGRLAPEARLDLHGMTSERAHGALVAFILAAHGTGLRLVLVITGKGRQGDADAHAPHRHGVLRHSLPHWLNAPPLAGRVLQLAPAHQSHGGGGAFYVYLRRIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY6</accession>
    <name>A0A2M9PCY6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Dihydrothymine dehydrogenase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dihydrouracil dehydrogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_08770</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the dihydropyrimidine dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000473">
        <property type="protein sequence ID" value="PJN95388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016627">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006210">
        <property type="term" value="P:thymine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006212">
        <property type="term" value="P:uracil catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005720">
        <property type="entry name" value="Dihydroorotate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044512">
        <property type="entry name" value="DPYD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43073">
        <property type="entry name" value="PTHR43073"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01180">
        <property type="entry name" value="DHO_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01037">
        <property type="entry name" value="pyrD_sub1_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="337"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="370"/>
            <end position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010804"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00030119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00032722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="434" mass="47084" checksum="F5EDBB75418FA0B2" modified="2018-04-25" version="1">MADLRTDFVGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGLDPHVVNVNGPRYGAVWGADRRLLGLNNIELITDRPLEVNLREIKAVKRDWPDRAMVVSLMVPCDEESWKFILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWCKAHTRMPVIVKLTPNITDIRKPAQAAKDGGADAVSLINTINSITSVDLDLFAPEPTIDGKGAHGGYCGPAVKPIALNMVAEIARDPATRGLPISGIGGITTWRDAAEFLALGAGSVQVCTAAMTYGFRVVQEMISGLGLWMDRKGHAGLSDVVGRAVPNVTDWRHLNLNYVTKARIDQEACIHCGRCFAACEDTSHQAIAMLPGRVFEVKDEDCVACNLCVNVCPVEDCITMERVAPGQVDLRTGRVVPAEFGDWTTHPNNPMAAKAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ9</accession>
    <name>A0A2M9PCZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cu(I)-responsive transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cueR</name>
        <name evidence="5" type="ORF">CNY89_08550</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000456">
        <property type="protein sequence ID" value="PJN95425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01108">
        <property type="entry name" value="HTH_CueR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011789">
        <property type="entry name" value="CueR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015358">
        <property type="entry name" value="Tscrpt_reg_MerR_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00376">
        <property type="entry name" value="MerR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09278">
        <property type="entry name" value="MerR-DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02044">
        <property type="entry name" value="CueR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14933" checksum="62D726223C51957E" modified="2018-04-25" version="1">MNIGEIAQAVGMPPKTIRYYEDIGLVNPKRSGNGYRVYGDTDRHQLAFLGRARSLGFSIEECRALLALYADRGRASAEVRAIAEDHLAAIEEKIAALRAMQATLSELVSACAGDDRPDCPILADLAHEVGAKGCCGERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD41</accession>
    <name>A0A2M9PD41_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cyclohexanone monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08375</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FAD-binding monooxygenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000443">
        <property type="protein sequence ID" value="PJN95459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004499">
        <property type="term" value="F:N,N-dimethylaniline monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020946">
        <property type="entry name" value="Flavin_mOase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00743">
        <property type="entry name" value="FMO-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="549" mass="61985" checksum="11E99996A60CBA9F" modified="2018-04-25" version="1">MDGGFAKDDHASAQNEPVALDALVIGAGVAGLYQLHQLRGEGMKVLAVDTAADVGGTWYWNRYPGAKFDSESYIYQYLFDEQLYKDWTWSERFPGQPEIERWMHYIAERLDLRRDILFSTTVTSAEYDETRGRWTVRTDRGDTFDVQFLIGCCGMLSAPLENRFPGQDTFEGRIFHTARWPREQLDLSGKRVGVVGIGATGIQVIQTIAQEVGHLTVFVRTPQYVLPMKNPKYGPEEEKAYKARFEEFRQNLPRHFTGFEYDFTRPWAGLTPDERRAMLEEIHADGSLKLWLASFVEIFLDPKVSAEVSDFVAAKMRARLKDPELIDLLVPKPDHYGFGTHRVPLETNYLEVYHRDNVTAVSVRDNPIVEVVPQGIKLADGTVQELDVIILATGFDAGSGAFTRIDVRGRDGRSLKEDWSRDIRTAYGMQAHGYPNFFMTGAPLAPSAALCNMTTCLQQQTEWITNAIRYLRAGNKTVMEPSAEVEEAWVQHHDETANATLIAKTNSWYVGSNVPGKPRRVLSYTGGVGTYRQKCLELAEGGYQGFEMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG6</accession>
    <name>A0A2M9PDG6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HWE_HK domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07550</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000384">
        <property type="protein sequence ID" value="PJN95591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011495">
        <property type="entry name" value="Sig_transdc_His_kin_sub2_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011102">
        <property type="entry name" value="Sig_transdc_His_kinase_HWE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07568">
        <property type="entry name" value="HisKA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00911">
        <property type="entry name" value="HWE_HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="HWE_HK" evidence="2">
        <location>
            <begin position="346"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="494"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="494" mass="53543" checksum="C0993220388DBC40" modified="2018-04-25" version="1" fragment="single">MSSNTTTDPSVSPGPTQTSRRVRRSLVLLRWGSLIAPLVLFAAFAVTAWNRLEADAMREASRRSELIVEYVRRTVEGQELLLTAADEAHGRLSFGADIEERMHRFLAAMTGASGWDSVSLIAPDGANLLTSERYPATGYFATPEYVAGISRSEMFIDRLSLGRTRLLVLAMRDHDAPAPGIWLAKVEVAPIEDFLRNIAGGSGRDAASVMRADGRVLLRNLPMTDDLQLTADTMVMRKIATSDVASYETVSAIDGVRRIYSTRRIGDLPLYANFGMAVAGVREAWMRQAMLAAALLGSFGAIGFGIARYAGRALEAETARAAHDFDRKLLAEAQKTAATRETMLRELNHRINNNLQMIQSLIRLQKTREAGPDLDEISARILAIARIHDLLYQSGSSFHVDLAALLQSVASNAALVPPERGIVVDCDLQRVEADARVATPLALCVTELVTNAVKHAFGPEGGTIAIALRAIDGRAGAEVTVSDDGRGLPETVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI1</accession>
    <name>A0A2M9PDI1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000393">
        <property type="protein sequence ID" value="PJN95572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="24272" checksum="EFCA676E1AB56301" modified="2018-04-25" version="1">MNRHARRGPAIIGKVDAGAAIHRIGSRAAEECIGAIAAELLVRPGAAVERIAPEPALEQIVARAARQKVVAVLTEEDVGPIAAVEPVLAAAARQGVDPAEAAQLVVATIAGQPVGEGAAEDAFDEEEPVAARMAAEGDARRQVDGDGRVRILIARRVLAQQGGGIAHPGRGSAIQDVCARAAFEQVVAAAALQLVVSVAADQRVETAFPEQAIIAAAAFEHIVADRTPDEIAEVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW5</accession>
    <name>A0A2M9PDW5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Tyr recombinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000325">
        <property type="protein sequence ID" value="PJN95737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13058" checksum="7A4C16F88B9196CB" modified="2018-04-25" version="1" fragment="single">DLLSFKRQKTGIKAVVPIRTELRAVIDRTPDIAPAFLLTSYGRPFTAAGLGNMFADAARSAGMVARLHGLRKAFCVYWAEEGASTHQIAAMAGHISLSEVGRYTRAADKERIVRALVQSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW9</accession>
    <name>A0A2M9PDW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Excinuclease ABC subunit UvrB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06735</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000325">
        <property type="protein sequence ID" value="PJN95739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004807">
        <property type="entry name" value="UvrB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041471">
        <property type="entry name" value="UvrB_inter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24029">
        <property type="entry name" value="PTHR24029"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17757">
        <property type="entry name" value="UvrB_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="46"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="277"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="435" mass="49088" checksum="91F699B228ABEED3" modified="2018-04-25" version="1" fragment="single">MTVSHPLPMLSDPRSRDKLEGGKRFVLRSEFEPAGDQPVAIAELVAGVQGGERNQVLLGATGTGKTFTVAKIIEATQRPAIILAPNKTLAAQLYGEFKGFFPENSVEYFVSYYDYYQPEAYVARTDTFIEKESQINEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYGAMTQDLVAGQSYDQRQVIADLVAQQYRRNDVAFARGAFRVRGDSLEIWPAHLDDRAWRLSFFGEELESIQEFDPLTGERTGPMERIRVYANSHYVTPRPTMQQAIKGIRAELRQRLDQLTAEGKLLEAQRLEQRCSFDLEMLEATGVCNGIENYSRYLTGRRPGEPPPTLFEYIPDNAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWEIDQAGGVFTEQVIRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE34</accession>
    <name>A0A2M9PE34_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phospholipase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000300">
        <property type="protein sequence ID" value="PJN95801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003140">
        <property type="entry name" value="PLipase/COase/thioEstase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02230">
        <property type="entry name" value="Abhydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_2" evidence="1">
        <location>
            <begin position="2"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="21190" checksum="07C81668F64FADA8" modified="2018-04-25" version="1">MVIFLHGYGADANDLIGLADPLAPHLPNTRFLAPNAPQRCVNNPMGYQWFPIPWLDGSSEAEAEAAAGEAYAALNGYLDDVAKQTPPERTILFGFSQGTMMALHVGLRRKAELAGIVGFSGRLLWPERLAAEITVKPPVLLIHGDEDPMVPFASLSEAADALSAAGVETYAHVSRGVGHGIAPDGLGVALGFIHERLKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB4</accession>
    <name>A0A2M9PEB4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Electron transfer flavoprotein-ubiquinone oxidoreductase</fullName>
            <shortName evidence="9">ETF-QO</shortName>
            <ecNumber evidence="9">1.5.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_06015</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Accepts electrons from ETF and reduces ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H(+) + oxidized [electron-transfer flavoprotein]</text>
            <dbReference type="Rhea" id="RHEA:24052"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="1.5.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.1" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000280">
        <property type="protein sequence ID" value="PJN95863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004174">
        <property type="term" value="F:electron-transferring-flavoprotein dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040156">
        <property type="entry name" value="ETF-QO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10617">
        <property type="entry name" value="PTHR10617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 9" id="KW-0274">FAD</keyword>
    <keyword evidence="3 9" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="7 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <keyword evidence="8 9 10" id="KW-0830">Ubiquinone</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="290" mass="31228" checksum="29C8B9780AF04981" modified="2018-04-25" version="1" fragment="single">VVHLNYRNPWLSPFEEFQRFKTHPDIRDTFEGGKRLSYGARALTEGGWQAIPQLTFPGGALLGCAAGFMNVPRIKGSHNAILSGVHAAEAAFSAIAEGRSGDRLETYETAARSGDIARDLKPARNVKPLWSRFGTLGGVALGGLDMWANTLLPGRGFGLTLGHGKPDSDTLLPAADCAKIAYPGPDGKLTFDRLTSVAFSGTNHEEDQPVHLRLADPEAPIRDTLPRFAEPAQRYCPAGVYEVTEEAGRPAFRINAQNCLHCKTCDVKDPARNIAWTCPEGGGGPNYSGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH5</accession>
    <name>A0A2M9PEH5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Formyltetrahydrofolate deformylase</fullName>
            <ecNumber evidence="3">3.5.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Formyl-FH(4) hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 5" type="primary">purU</name>
        <name evidence="5" type="ORF">CNY89_05805</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>(6S)-10-formyltetrahydrofolate + H2O = (6S)-5,6,7,8-tetrahydrofolate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:19833"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57454"/>
            <dbReference type="EC" id="3.5.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; IMP biosynthesis via de novo pathway; formate from 10-formyl-5,6,7,8-tetrahydrofolate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the PurU family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.10" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000267">
        <property type="protein sequence ID" value="PJN95894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00170"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008864">
        <property type="term" value="F:formyltetrahydrofolate deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016742">
        <property type="term" value="F:hydroxymethyl-, formyl- and related transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04875">
        <property type="entry name" value="ACT_F4HF-DF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd08648">
        <property type="entry name" value="FMT_core_Formyl-FH4-Hydrolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01927">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041729">
        <property type="entry name" value="Formyl-FH4-Hydrolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004810">
        <property type="entry name" value="PurU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044074">
        <property type="entry name" value="PurU_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42706">
        <property type="entry name" value="PTHR42706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01575">
        <property type="entry name" value="FFH4HYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00655">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 3" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="3" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="4">
        <location>
            <begin position="7"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="285" mass="31257" checksum="0A0019DC57838A15" modified="2018-04-25" version="1">MSDTSFILTLSSDPLPGIIAAVATAIADLGGNITETHQHWDRPTNRFFLRVAFLGSDTLTLSAVEQALAPTVERFGLDLKVSDATRPPRIIAMVSKFDHALLHLLYQIRVGWLQAEVAAIVSNHEDARRIADHEGVRFVHLPVTPETKPKQEAALLALIEETGAETVVLARYMQVLSDDLSHKLSGRAINIHHSFLPAFKGANPYKQAYQRGVKLIGATSHYVTGDLDEGPIIEQDLARISHADTAEDLVAIGRDTESRVLARAVKLHVERRVLLCGSRTVVFGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH6</accession>
    <name>A0A2M9PEH6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05435</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000246">
        <property type="protein sequence ID" value="PJN95951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02796">
        <property type="entry name" value="tRNA_bind_bactPheRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002547">
        <property type="entry name" value="tRNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033714">
        <property type="entry name" value="tRNA_bind_bactPheRS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01588">
        <property type="entry name" value="tRNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50886">
        <property type="entry name" value="TRBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="1 3" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="TRNA-binding" evidence="4">
        <location>
            <begin position="39"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="18532" checksum="92DBAA742F3E0E4E" modified="2018-04-25" version="1">MKFTLAWLKEHLETEASLDQITFALTDLGLEVEGVTDPGAKLKAFTVGEVIEASPHPDADKLRVCRVATGQGETQIVCGAPNARAGIKVVVAAPGDYVPGTDLTLKVGKIRGVESHGMMLSEREMELSEEHDGILELAADAPVGARFVDVRTFDPVIEIGVTPNRPDALGVAGMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL4</accession>
    <name>A0A2M9PEL4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000244">
        <property type="protein sequence ID" value="PJN95962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011928">
        <property type="entry name" value="Phage_phiJL001_Gp84"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018964">
        <property type="entry name" value="Phage_phiJL001_Gp84_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019228">
        <property type="entry name" value="Phage_phiJL001_Gp84_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09931">
        <property type="entry name" value="DUF2163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09356">
        <property type="entry name" value="Phage_BR0599"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02218">
        <property type="entry name" value="phg_TIGR02218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2163" evidence="2">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Phage_BR0599" evidence="1">
        <location>
            <begin position="195"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="298" mass="32365" checksum="9BDF1AFE1D9710DA" modified="2018-04-25" version="1">MRRIDPELQARLNSGATTLCRCWRVERQDGRRYGFTDHDVDLSFDGSVFRASSGLDATAVQSSTGLSVDNGQVMGALSDAGVSEAEIAAGRFDRAAIEHWLVDWTRPDLRALIFAGRFGEIRRRDGAFEVELRGPAEALNAPVGRTLQRNCDRRLGDGKCRFDLGTPGFSADSVVARVEAGAVIHVEGLGGYADGWFAGGALLWTSGANAGERATVKTDGLRPDGARRIELWREPGMAVAVTDGLHLAAGCDRRAETCRSKFANFLNFRGFPHIPGDDWVAAYPKDGEVHDGSSRRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM6</accession>
    <name>A0A2M9PEM6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Terminase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000232">
        <property type="protein sequence ID" value="PJN95995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005021">
        <property type="entry name" value="Terminase_largesu_Lambdalike"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41287">
        <property type="entry name" value="PTHR41287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03354">
        <property type="entry name" value="Terminase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="553" mass="59810" checksum="9DB124ADCAAA3D42" modified="2018-04-25" version="1">MGLRGKGAKPKHLNLVGGGAPDLFNPQGTAPARREMPWEVPGLSRVDRVVAFLEDLPITQGSLAGQKLRVRPWQRDFLEAVYREDEDGVRPVRTAVLSMPRKNGKTQLVAGLALCHLLGPEAENRGEVYAAANDRFQSGKTFSEICAILDAHPELDARVNVTKFRKEIEVLHGPGKGSLFAALSADVAGKHGLSPSFIVYDELGQASKRDLYEALDTAMGARDNPLLCVISTQAADDHAVMSELVDYGAKVNAGEIEDPAFHLTFYGAADPDDPWSPETWAKANPALGDFRSASDVARQAAQAQRMPSAEQAFRNLILNQRVSAHVRFIAKSEWDANGAAPRADLKGRVCFGGLDLSASRDLTAFVLVFPAEDGSFDVIPRFYLPEAGLKDKAEADRVPYDVWARRGVLTAIPGATVDPSFVAMDLAEAAAEYDLQGLAYDRWRIEDLKRELAAIGAELPLKEFGQGFKDMAPAIDTLERLLADGRLRHGGNPILTMCASNAVIERDAAGNRKLAKHKSTGRIDGLVALAMALAACGRQEPEALPACLAELME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET6</accession>
    <name>A0A2M9PET6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase_S49 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000216">
        <property type="protein sequence ID" value="PJN96038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07023">
        <property type="entry name" value="S49_Sppa_N_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002142">
        <property type="entry name" value="Peptidase_S49"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01343">
        <property type="entry name" value="Peptidase_S49"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="256"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S49" evidence="2">
        <location>
            <begin position="68"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01343"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="31572" checksum="CFE4C729D4F94C0A" modified="2018-04-25" version="1" fragment="single">MGRSVVPISDQIARYEISGVITDDVARDDLLAELAETEAVRAVVLRINSPGGTTAGSEALFASIREIAEIKPVVAVLGEVAASGGYWLATAADRIHVDPNSITGSIGVIYAAFGFPELLARHGVERRVHTAGEDKSLLDPFRPERPKDVERLKRLQAEIHENFIDQVKTRRGDRLKGDDLFTGEIWVGAGAIEVGLVDEIGHLAPTMHRLYGEKTKFRVLSRAAPDAPPRPARPLGAAVRGRGARTLDPFRIDRAMIVKLALFLLLVLVALGFVGRLLPRPKGPPARRVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ7</accession>
    <name>A0A2M9PEZ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000208">
        <property type="protein sequence ID" value="PJN96064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="36265" checksum="25A666931A58D9A9" modified="2018-04-25" version="1">MAETVGRLQGVLRRHLRHLDLKRLTRGDGDPFRLRAEFELDDRLGARRDPGGFVLRFGIVPLRDLAVLADHVSAAVVFFGPPGRPGCLPALTVARVETLAAPPDEAQVRGWSEVAQSVSEPFRREEVRRYLVEAALDFLVAHETAHARLGHLDALPSLLLGAVLDEGEQARRFDFSEAARGLEYAADIAGFLASVGEIEHADLHGDLSDRLWAEGSLRLSLRLTACYLVLLLFHLRGAQDAAHPAPLARLLAVAQIPLSAPAAVPEPLAGEGAGASILNAFKILLQAARRLAPLQRLRDLGPGPILDRMAEERRLAAAAMRSTFPLMEGRDYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF10</accession>
    <name>A0A2M9PF10_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000191">
        <property type="protein sequence ID" value="PJN96118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9298" checksum="66137D5401020F05" modified="2018-04-25" version="1">MSNDPGYSPGSAASMPSAGHTDENGVFHWGTAADRAERIARDNTSPPQPEIQPDAAADAARALWENATPSPEIERNGLQIERERER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF20</accession>
    <name>A0A2M9PF20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Galactose 1-dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000189">
        <property type="protein sequence ID" value="PJN96128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9813" checksum="43632769CAE610FE" modified="2018-04-25" version="1" fragment="single">DWRQTGPQSWDVAVETEDGGRLLLTHGGSRLTLDGAPALEAEDAEYRRLYARFADLVAAGRSDVDLAPLTHVADAFLLSRRIEVEAFED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF21</accession>
    <name>A0A2M9PF21_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_04400</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000189">
        <property type="protein sequence ID" value="PJN96126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="64"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="184"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="17"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="24030" checksum="F8DE2E85023A6CE3" modified="2018-04-25" version="1">MMQFTFIDILRNLLLAARWTVLLSVISFIGGGLLGAAILYLRISPARWVSRLARGYIEVFQGTPLLIQLFIIFFGFSLVGVTVSSLVAASLGLTLWTAAFLAEIWRGCVESVPRGQWEASSSLGMGRLQQMGHVILPQALRVAVAPTVGFSVQVVKGTAITSIISFVELTRAGTIVTNATYQPFLVYGLVALIYFCLCWPLSKSSQILERRLNVAHRNH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF22</accession>
    <name>A0A2M9PF22_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AP_endonuc_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000193">
        <property type="protein sequence ID" value="PJN96112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="31"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="20582" checksum="62CA63A60C990059" modified="2018-04-25" version="1">MTLGMGYLTLGDLDPFDMVAAARAGGFAEAGVRLTGHRPGDPWPFDPTDPAHVARMAKTARTAGVRLSNACTYRFTPETDPADYAPVLAACAALGVGTMIANAACPDQALIARNLAAVADLAAAHGMRIALEFIPVSTIPDLCTALAVIEAAGRRNIGLAIDALHLARSGGEAQDLAALPPTALILQLCDGPSAASPRRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF36</accession>
    <name>A0A2M9PF36_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000177">
        <property type="protein sequence ID" value="PJN96167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045622">
        <property type="entry name" value="DUF6441"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20039">
        <property type="entry name" value="DUF6441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10195" checksum="92D69196326E7595" modified="2018-04-25" version="1" fragment="single">MKLKLDIDPDIVAMMAAEVAAGERAVTAAMREAGTGLKSAWRLQITGAGLGPRLANSIRNQNFPRSGESLDAAALVWSKAPVIVGAHDTGPLIRSKSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH2</accession>
    <name>A0A2M9PFH2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03545</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000146">
        <property type="protein sequence ID" value="PJN96272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041117">
        <property type="entry name" value="SoxA_A3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17806">
        <property type="entry name" value="SO_alpha_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SO_alpha_A3" evidence="3">
        <location>
            <begin position="49"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="1">
        <location>
            <begin position="148"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="2">
        <location>
            <begin position="441"/>
            <end position="526"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="534" mass="57357" checksum="1A35A06DBEC2AED4" modified="2018-04-25" version="1">MGFDDRRKVLRRQVLGGFLEVDELAGFPAIEAEPATGCGTPVWAVAEPKGKAFVDFQNDVHVGDLKLAHAEGYGHVELAKRYTTSGMATDQGKLSNVNAIGILAAARGVSPAEVGTTTYRPFFTPVSFGALTGMHRGRRFQPVRRSPLHGWAEKHGARFVETGLWLRSSYFPRPGEATWRESVDREAQAVRVGVGICDVSMLGKIEIFGDDAAEFLNRVYCNAFLKLPVGRARYGLMLREDGCVYDDGTTSRLGERHYVTTTTTALAEGVLTHLEFCAQALWPELDVRLASATDQWAQMAVAGPKARAALAQVVEGDLSDAAFPYLAAREVTLRGGLRGRLFRISFSGELAYELAVPAGYGESVADAILAAGAPFGITPYGSETLGVLRVEKGHVTHAEINGTVTPADLGMGRMVSQAKPDFIGKALLAREGMQAPDRPALVGLRPLDPAQAFRAGAHVLEKGAAATLANDQGYVTSALFSPHVGSTIGLALVRRGPERHGEEVLVWDALRDAMTPAVLCPPCFVDPENVRLHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR1</accession>
    <name>A0A2M9PFR1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">NADH-quinone oxidoreductase subunit F</fullName>
            <ecNumber evidence="13">7.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_02855</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 13">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 13">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4 13">Belongs to the complex I 51 kDa subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="13"/>
    <dbReference type="EMBL" id="PHNO01000111">
        <property type="protein sequence ID" value="PJN96385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045271">
        <property type="term" value="C:respiratory chain complex I"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1440.230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.11540">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001949">
        <property type="entry name" value="NADH-UbQ_OxRdtase_51kDa_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011537">
        <property type="entry name" value="NADH-UbQ_OxRdtase_suF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011538">
        <property type="entry name" value="Nuo51_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037225">
        <property type="entry name" value="Nuo51_FMN-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019575">
        <property type="entry name" value="Nuop51_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037207">
        <property type="entry name" value="Nuop51_4Fe4S-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019554">
        <property type="entry name" value="Soluble_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01512">
        <property type="entry name" value="Complex1_51K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10589">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10531">
        <property type="entry name" value="SLBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00928">
        <property type="entry name" value="NADH_4Fe-4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140490">
        <property type="entry name" value="SSF140490"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142019">
        <property type="entry name" value="SSF142019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01959">
        <property type="entry name" value="nuoF_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00644">
        <property type="entry name" value="COMPLEX1_51K_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00645">
        <property type="entry name" value="COMPLEX1_51K_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 13" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 13" id="KW-0288">FMN</keyword>
    <keyword evidence="10 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12 13" id="KW-0520">NAD</keyword>
    <keyword evidence="15" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-0874">Quinone</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-1278">Translocase</keyword>
    <feature type="domain" description="NADH_4Fe-4S" evidence="14">
        <location>
            <begin position="331"/>
            <end position="376"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU364066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="SMART" id="SM00928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="431" mass="47146" checksum="FCBBFE3DAAEEEF53" modified="2018-04-25" version="1">MLADKDRIFTNIYGMGDRSLRGARARGHWDGTAEIIARGRDKIVEEMKASGLRGRGGAGFPTGLKWSFMPKGNDGRPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHAAYIYLRGEYIREREALQIAIDECYDAGLLGPNAAGSGWDFDLYLHHGAGAYICGEETALLESLEGRKGMPRLKPPFPANTGLYGAPTTVNNVESIAVAPTILRRGAGWFSSFGRQNNAGTKLFAISGHVNNPCVVEEAMSIPLRELLDKHCGGVRGGWKNLKAVIPGGSSVPLLPAAICDDAIMDFDWLREQRSGLGTAAVIVMDQSTDIIKAIWRLAKFYKHESCGQCTPCREGTGWMMRVMERLVTGEAEVEEIDMLLDVTKQVEGHTICALGDAAAWPIQGLIRHCRDEIEDRIRHKRTGRVSAVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU5</accession>
    <name>A0A2M9PFU5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Threonine synthase</fullName>
            <ecNumber evidence="5">4.2.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_02765</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-homoserine = L-threonine + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10840"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57590"/>
            <dbReference type="ChEBI" id="CHEBI:57926"/>
            <dbReference type="EC" id="4.2.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 9">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis; L-threonine biosynthesis; L-threonine from L-aspartate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the threonine synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.3.1" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000108">
        <property type="protein sequence ID" value="PJN96398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00050">
        <property type="reaction ID" value="UER00065"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004795">
        <property type="term" value="F:threonine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009088">
        <property type="term" value="P:threonine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029144">
        <property type="entry name" value="Thr_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037158">
        <property type="entry name" value="Thr_synth_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004450">
        <property type="entry name" value="Thr_synthase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14821">
        <property type="entry name" value="Thr_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00260">
        <property type="entry name" value="thrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 9" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0791">Threonine biosynthesis</keyword>
    <feature type="domain" description="Thr_synth_N" evidence="11">
        <location>
            <begin position="2"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="PALP" evidence="10">
        <location>
            <begin position="99"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="9">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013028"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00018679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR604450-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF14821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="369" mass="39955" checksum="45388E2DC99D171B" modified="2018-04-25" version="1" fragment="single">MQYISTRGAAPKLGFEEAMLAGLALDGGLYVPETWPQFSHDEIAALAGLSYEETAYRVMAPFVGDAFPEDEFRAIIARAYACFDHEARAPLVQIGPNDWILELFHGPTLAFKDVAMQLIGQLFEASLKRSGQRIAIIGATSGDTGSAAIEAFRGRDGVDVFILFPDGRVSEVQRRQMTTPDDPNVRALAIAGDFDDAQARVKDMFNDHAFREAMGLAGVNSINWARVLAQAVYYFTAAVALGAPHRPVSFAVPTGNFGDVFAGYVAKRMGLPIDRLVIGTNQNDILHRTLETGSHVKEGVAPSISPSMDIQVSSNFERLLFDLYDREGPAVAALMAELGDKGGFTLSQGALDRLRADFDSDRASEAETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG26</accession>
    <name>A0A2M9PG26_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Universal stress protein UspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal stress protein A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000078">
        <property type="protein sequence ID" value="PJN96505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="2">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="15632" checksum="2BEAC8D46D9B35C6" modified="2018-04-25" version="1">MYQNILIAIDGSELSGKGVVAGVDLARGSKARVTILTVSEPFPSFDLGHKLGLFRDQAAIDQYDDACRRTAAAVLEKAAGTAAAAGVACETLHVENSRPADGILETAAQRSCDLIVLTSNGRQGFERFVLGSQASRVVQAAETSVLVVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD1</accession>
    <name>A0A2M9PGD1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000057">
        <property type="protein sequence ID" value="PJN96599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022028">
        <property type="entry name" value="DUF3604"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12228">
        <property type="entry name" value="DUF3604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="404" mass="44559" checksum="2FC5FD4D9E682E4A" modified="2018-04-25" version="1" fragment="single">MDAFIAGNRLTPDDAYRFAKGEEIMVNGSLHKIKRPLDFVAVTDHSEFMGEAYSLMNEGAPGYDSQVAVAFRTAPDLKTALGLYNEYVLTPLAGGGDPHPPFFQGVDAIKSTWQKNFEATEKYYEPGVFTTIHAYEWTSAPGGSNQHRNVFFRDTNVPDMPFSANEGADPEELWAWMQTQRDDGKKVFAIPHNSNQSKGLLFAEASLTGVPIGKAYATTRASMEPLIEMMQIKGNSEVVPNFWPKDEFADFENAISLQQFSGRGFVKENFVRYGLGRGVKYQADLGVNPFKYGFVGGTDSHNGTPSNVEEDNYTVGSHGLADQTAEVRATSMLEGEMRIADMNPGALTAVWAESNTRGAIWDSMLAKETFATSGPRMKVRFFAGQGFADRYDSYDAMITDGYAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE6</accession>
    <name>A0A2M9PGE6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Pyruvate dehydrogenase E1 component</fullName>
            <ecNumber evidence="4 10">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">aceE</name>
        <name evidence="14" type="ORF">CNY89_01490</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 10">Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9 10">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10480"/>
            <dbReference type="Rhea" id="RHEA-COMP:10481"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 10">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer. Part of the PDH complex, consisting of multiple copies of pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="4 10"/>
    <dbReference type="EMBL" id="PHNO01000053">
        <property type="protein sequence ID" value="PJN96617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02017">
        <property type="entry name" value="TPP_E1_EcPDC_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035807">
        <property type="entry name" value="PDC_E1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004660">
        <property type="entry name" value="PDH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041621">
        <property type="entry name" value="PDH_E1_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43825:SF3">
        <property type="entry name" value="PTHR43825:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17831">
        <property type="entry name" value="PDH_E1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000156">
        <property type="entry name" value="Pyruvate_dh_E1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00759">
        <property type="entry name" value="aceE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10 14" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="12">
        <location>
            <begin position="199"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="domain" description="PDH_E1_M" evidence="13">
        <location>
            <begin position="485"/>
            <end position="696"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="259"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023052"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00033635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000156-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF17831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN96617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="884" mass="98433" checksum="C2F6571A8CE30D41" modified="2018-04-25" version="1">MADTQDLDPIETREWLESVEDVIDRDGAERAHFLLDQAVGAARARGANLPFGSTTGYVNTIPTDQQPAFPGDLELEWRIRTINRWNAMATVVRRNKVSSEYGGHIASFASSAVLYDIGLNHFWRTRTEGGHGGDLVFFQGHAIPGVYARSFMEGRLSADTLDNFRAETGGQGLSSYPHPWLMPDYWQFPTVSMGLGPLMAIYQARFMKYMHNRGLIDMADRKVWAFLGDGEMDEPESLGAIGLAARENLNNLIFVINCNLQRLDGPVRGNSKIIQELEGTFRGAGWNVIKLIWGSGWDALLEKDDSGKLRQLMDETVDGDYQTFKSKSGGYIREHFFGKYPETAKLVEDMTDAEIWALRRGGHDPQKVFAAYDKAVKTEGQPTVLLVKTVKGYGMGDAGEGQNITHQQKKLAEDQLRAFRDRFQIPVSDETLAKAPYVPLGNEQKDYILKKRDALGGAFPQRKYKDAAKLEIPELSFFEPLLKDTGEREISTTMAFVRALNLLLRDKKIGKFVVPIVPDESRTFGMEGMFRQIGIYNPKGQLYTPQDADQLSYYKESKSGQVLQEGINEAGAMADWIAAATSYSVHGVPMIPFYIYYSMFGFQRIGDLAWAAGDSRARGFMLGGTAGRTTLNGEGLQHQDGHSHILAGTIPNCISYDPTFGFEVAVILQDGMRRMFAEQEDVYYYLTVGNENYHHPAMPEGVEEGIVKGLYRFRKAEKPGKKHVNLMSCGSIMIQTLKAAEILAEQGITSDIWAATSLNELAREAQDVERENRLNPTAAPKKAFVTQALEGSDGPVIAATDYMKNYAEQIRAFVPQPFHVLGTDGFGRSDSRVALRRHFEVDANHIAAAAVYALFREGKVTAAEVETAYRNCEIDPSKPNPRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH7</accession>
    <name>A0A2M9PGH7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000045">
        <property type="protein sequence ID" value="PJN96648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12614" checksum="FCE9E4915621ED76" modified="2018-04-25" version="1" fragment="single">ARVLGHDVLRRAFGDRVDAGLLGSQTALTATVFASRLMPFVSFDMISYAAGLSRLHAWLFALATLAGIIPASFLLAHFGGEAVSGDLGRATWAVLGLGLVTGLPLLWVALRQKPEKENP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ9</accession>
    <name>A0A2M9PGJ9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF262 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000041">
        <property type="protein sequence ID" value="PJN96661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004919">
        <property type="entry name" value="DUF262"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03235">
        <property type="entry name" value="DUF262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF262" evidence="2">
        <location>
            <begin position="15"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="157"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="268" mass="29991" checksum="E8ADE270147EE4DE" modified="2018-04-25" version="1" fragment="single">MALFTTSNYPLVALIEDIDLGKIGLPELQRPFVWPNVNVRDLFDSLYRGYPAGFLLFWETGVGAALKGIGTKNVQAAPKLAIVDGQQRLTSLYAVVKGAEVLRANFKKERIQIAFNPLSGRFDVADAAIRKDKAFIPDISILWQSDFKPSAYRKEFLKQLRDVREITEDEAERIEGAIDHLRNLLHYSFVALTLSSTVDEETIAEVFVRINGKGKALNQADFIMTLMSVFWDEGRAELEAFALAATRPSDGQASPFNHFIKPSPDQLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP8</accession>
    <name>A0A2M9PGP8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Phasin_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000030">
        <property type="protein sequence ID" value="PJN96717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018968">
        <property type="entry name" value="Phasin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09361">
        <property type="entry name" value="Phasin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phasin_2" evidence="2">
        <location>
            <begin position="88"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="20027" checksum="ADDEAF2F83BE39D1" modified="2018-04-25" version="1">MRSERPAMTRRSKWRRSMPPRKAQPETENQSESTPVEIEAEAPVESEATTPVEAVTEAVEETVEAVEAVAESAPVEEIAKPADQAIDAVTATQQETLEAIETAGATMLENVTRAQRAIADFVSTRIREDLEAQQQLLRCKSFDEVRSVQSKFIKTAMEQYKSEAARLFKLGAATVTKSDDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX6</accession>
    <name>A0A2M9PGX6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="259" mass="28083" checksum="1AE91B5373176E1C" modified="2018-04-25" version="1">MYVYAFPPVAVVGHEWGVVDPVSRGEELFTGEIIEFAAGRRRRVVSLVVEGAADNNGGYMRALERLLRGGLHAVRLYSTPANHLEDVGVIPLPGAAEMVWTADDAEMVWNAGGTEMVWVHGAYVAPAGGPLLASPRDWHGMGKADATNLPPSREVAPPGQFVTVYSGGGLVSETRMLIQPIKSDEAGAALVVTETPFPAGGSLQIGTRETGIFKPESMPRWQRGLEDRGFQVTWSFREIFADEVRQELVEVNPWGTTWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH17</accession>
    <name>A0A2M9PH17_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Two-component sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="165"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="22493" checksum="B39A4652C78E0FA0" modified="2018-04-25" version="1" fragment="single">MVTLRDASVFTADERSGWLRLRTLIGLRWMALAGQAIAAIGCLTLGIAIPMAPFLLILGCGALFNLIARMTAPSSRRLTQREAVALLLFDLIQFGALLHFTGGLANPFALMLLGPVTIGAAALSLGATVALCGAAIVMITLLSITYIPLDLPGGVQIPHHDSLTLGAWVALSAGVVLIASYARRISGEIFRMSQALTATQVALDRERRMSAIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH77</accession>
    <name>A0A2M9PH77_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17895" checksum="C11424D2FD86A8C8" modified="2018-04-25" version="1">MTKAIRRPSAPPMPPIGRDKHILIERSKWTPGVERTEHNVRESPLRELEYLGVITPKQREAGEAFEADCRLFLPCGLRDSLDMTPRGRGHEVESEAQVERIVRAKARLRKVKAAAGPLYASLRHVAVDRKPLKMAALVLPDLLDKVGVIYGLIAPKRPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH92</accession>
    <name>A0A2M9PH92_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">O-succinylhomoserine sulfhydrylase</fullName>
            <shortName evidence="2">OSH sulfhydrylase</shortName>
            <shortName evidence="2">OSHS sulfhydrylase</shortName>
            <ecNumber evidence="2">2.5.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">metZ</name>
        <name evidence="5" type="ORF">CNY89_00095</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the formation of L-homocysteine from O-succinyl-L-homoserine (OSHS) and hydrogen sulfide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>hydrogen sulfide + O-succinyl-L-homoserine = L-homocysteine + succinate</text>
            <dbReference type="Rhea" id="RHEA:27826"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:57661"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 2 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; L-homocysteine from O-succinyl-L-homoserine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the trans-sulfuration enzymes family. MetZ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.-" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000003">
        <property type="protein sequence ID" value="PJN96864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00449"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071266">
        <property type="term" value="P:'de novo' L-methionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071268">
        <property type="term" value="P:homocysteine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02056">
        <property type="entry name" value="MetZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006234">
        <property type="entry name" value="O-succ-hSer_sulfhydrylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11808">
        <property type="entry name" value="PTHR11808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01325">
        <property type="entry name" value="O_suc_HS_sulf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="2 3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2 3">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="400" mass="43064" checksum="CEBACE4B60DE2A9D" modified="2018-04-25" version="1">MHDGQDRRNDWRPRTKMVHAGTRRSQYAELSEAIFLTQSFVYPSAEAAEQRFIEAGEDEFIYARYGNPTVRMFEDRIAALEGAEDAFATASGMAAVHGALFSALRKGDHVVSARALFGSCLYIVETLLPRFGVEVTLVDGADLDAWRAAVRPDTRLVFLEAISNPTLEVIDIAGVSAIAHAAGALVMVDNVFATPVLQRSLTLGADVVIYSATKHIDGQGRCLGGVVLGTRDFIRGTLEPFLKHTGGALSPFNAWVMLKGLETIDLRVRAQAATGGRDRRALQDHPALERLIYPGLPGHPQHALAARQMETGGTMLAFELKGGKAAAFRAIDALSIVSISNNLGDAKSLVTHPATTTHQRLSPEQRAALGIGDGLVRLSVGLEDAQDLIEDLCRAFDAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P489</accession>
    <name>A0A2M9P489_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004794">
        <property type="protein sequence ID" value="PJN92352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7834" checksum="98B533D0CBBF3D78" modified="2018-04-25" version="1" fragment="single">RSKTVDEEISAKVVDFLDRNDPEKTDKPFFVWSQSRRTRAPAEAAAWRTLRSIAWLTSRVMASARARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F7</accession>
    <name>A0A2M9P4F7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26535</name>
        <name evidence="1" type="ORF">CNY89_29835</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004574">
        <property type="protein sequence ID" value="PJN92426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003460">
        <property type="protein sequence ID" value="PJN92791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7132" checksum="4A32D225B4CA9CA1" modified="2018-04-25" version="1" fragment="single">TRNLRFSTLKSWGLKLAKTSGFKKARIAVARKMAVILHAMWKTNTPFRWSQEAAAITIAMPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q0</accession>
    <name>A0A2M9P4Q0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004242">
        <property type="protein sequence ID" value="PJN92524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9001" checksum="FFC992096BF1FC8A" modified="2018-04-25" version="1" fragment="single">IFSGDEATVQQKQMDWVRAKLRYESGAVIGDDEARQEAATYFPRPGDRPERVKAKEESRKQAIEQMRLAAGRAAPGGVGAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S7</accession>
    <name>A0A2M9P4S7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004226">
        <property type="protein sequence ID" value="PJN92529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9038" checksum="FF5D31F778CCF5C5" modified="2018-04-25" version="1" fragment="single">GDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLLSVEADGIGEFSVKIKRIIPIVEIKCTMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P520</accession>
    <name>A0A2M9P520_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003908">
        <property type="protein sequence ID" value="PJN92637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="9142" checksum="4D0B12E5C7D78C80" modified="2018-04-25" version="1" fragment="single">MRCWSPRRWPRRSRSPRTSCAAGLLPEPVPAPTEDQLVAFHKANEALYTRPETRRITYALLEPETLAATIEIPEDELRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B5</accession>
    <name>A0A2M9P5B5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TRAG protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003683">
        <property type="protein sequence ID" value="PJN92719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10316" checksum="540A9D6F275198CE" modified="2018-04-25" version="1" fragment="single">HALTIAGSGSGKGSCQIIPNLKEWPESAVVIDPKGEVARETAVFRKENLGQEVAVLDPFIYASVPDELRQTLNPLDLVKTSADLNTLANGLIMRSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B9</accession>
    <name>A0A2M9P5B9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TAT-dependent nitrous-oxide reductase</fullName>
            <ecNumber evidence="1">1.7.2.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.4" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01003608">
        <property type="protein sequence ID" value="PJN92746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050304">
        <property type="term" value="F:nitrous-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011045">
        <property type="entry name" value="N2O_reductase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041142">
        <property type="entry name" value="NOS_propeller_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18793">
        <property type="entry name" value="nos_propeller_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50974">
        <property type="entry name" value="SSF50974"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11186" checksum="E41CD659DA699F1A" modified="2018-04-25" version="1" fragment="single">RGGIYLNGDLHHPHPSQTDGTYDGRYLFANDKANTRVCRVRLDVMRCDKIIEVPNAQAIHGLRVQKYPRTGYVFANGEDGVPQPNDGKILDDPKKYYAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J1</accession>
    <name>A0A2M9P5J1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23760</name>
        <name evidence="1" type="ORF">CNY89_26600</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003479">
        <property type="protein sequence ID" value="PJN92785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002626">
        <property type="protein sequence ID" value="PJN93098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11027" checksum="04DC1A943F85C8BE" modified="2018-04-25" version="1" fragment="single">MYRAVQLLGLNFEAPDQWIEARGGIPLLLGIGRWLAALATFTIVVELVSRSVGAWLRLRAQSCFPRNRVILLGFGDINHAIARSLKARHVTAVDKVFDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R5</accession>
    <name>A0A2M9P5R5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SCP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003179">
        <property type="protein sequence ID" value="PJN92886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55797">
        <property type="entry name" value="SSF55797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP" evidence="1">
        <location>
            <begin position="15"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10615" checksum="BA80F627C0C9D2C8" modified="2018-04-25" version="1" fragment="single">MGATSTPWPIRLRHLDAVNAARISEGLAPLQLSAELNAAADTHARDMSVQKRAWHFGSDLTSWRERAFRAGYRGEVVGENIFEGSDTDLTVLKYW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T5</accession>
    <name>A0A2M9P5T5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003171">
        <property type="protein sequence ID" value="PJN92889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9379" checksum="C10351948D932F03" modified="2018-04-25" version="1">MGAGAIRTNRVTGEAQLGPRGGEAKGKEMDSLLPRSHRPAGCHLGRARRQHLGPSSSIGRLIFVQLRHAHHRSSEPFRVPKMGRVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P681</accession>
    <name>A0A2M9P681_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3'-kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002776">
        <property type="protein sequence ID" value="PJN93042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14437" checksum="2FD9396EDA552EDF" modified="2018-04-25" version="1" fragment="single">LFHKADEDNQADPSSIFIRGAAVARRLLAEDTPSYVLHGDLHHENIRHHPERGWLAIDPKGLYGDRAYDAANALCNPGTLPEIVLNPRQAVETSDDHADALDITRERLLSYVFAHACLSASWSLEDSQDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D8</accession>
    <name>A0A2M9P6D8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002677">
        <property type="protein sequence ID" value="PJN93078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008866">
        <property type="entry name" value="Phage_lambda_GpA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05876">
        <property type="entry name" value="Terminase_GpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14912" checksum="4A415EFDFA948306" modified="2018-04-25" version="1" fragment="single">DPTTVGYHLSALYSPIGWLSWERIVRAWDAAQGSDEAIKAFRNTILGETWVETGEAPDWQRLYDRRERWTSGTVPAGGLFLTAGADVQKDRIEVDVWAWGRGLESWLVDHVVIEGGPGRHGSCPRWWCSSTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U3</accession>
    <name>A0A2M9P6U3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002306">
        <property type="protein sequence ID" value="PJN93235.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93235.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11429" checksum="782810ECAE891FC1" modified="2018-04-25" version="1" fragment="single">MAETLSQTAPAADPHAAARRGAAQIETFGLILGGMKCGSTSLYDYLVTHPQVARCRVKEPNFFSVPKGRGPEYYPTLWRDFDPARHKVALEASVSYTKLPRYGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V2</accession>
    <name>A0A2M9P6V2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Two-component sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002272">
        <property type="protein sequence ID" value="PJN93249.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93249.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16933" checksum="9BB45B8F40664732" modified="2018-04-25" version="1" fragment="single">VVDIVGRENDGDTQRLGAIRAHDEFFTYIVRDVQGRILVQSHAADPAVFPVWDGPGFRQTATHRLYNDEALQGSIRITLAEPLEHRATVAREIQMGLGLPLLVVIPLAFLAIVLAVRGSLAPLRRFRNRLAARNARDLSPVPADDLPSEIAPMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Z3</accession>
    <name>A0A2M9P6Z3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002106">
        <property type="protein sequence ID" value="PJN93321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8282" checksum="8752229E1E00E371" modified="2018-04-25" version="1" fragment="single">FEHGTKPMGDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLLSVEADGIGNFRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P743</accession>
    <name>A0A2M9P743_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21685</name>
        <name evidence="1" type="ORF">CNY89_21700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002100">
        <property type="protein sequence ID" value="PJN93325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002096">
        <property type="protein sequence ID" value="PJN93328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8738" checksum="AD47C9F9BF46F3C4" modified="2018-04-25" version="1" fragment="single">LTIFERLVVAAAKGSPDVQVKALMEGFESRSPQQAFRKETWDSIRDVYIGKGAKNGYWRLLLTAQPTEAVAEPAEEATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P764</accession>
    <name>A0A2M9P764_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001991">
        <property type="protein sequence ID" value="PJN93383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6526" checksum="4CBDE54B3CFDE13F" modified="2018-04-25" version="1">MADVIVVTFEDETAAFGLRAALGKLQRDYLIETENVVVVTRDETGGLPPGKFSNSHSSSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P795</accession>
    <name>A0A2M9P795_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001907">
        <property type="protein sequence ID" value="PJN93434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8764" checksum="D25FDF7A19F3788C" modified="2018-04-25" version="1">MLPETLILCPAPGSEAMRLALEAARRVYDESGLSEEEREQDMRLQRQFLAFVRGEMPDFAHAPGRPAGRRLTSCCRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P799</accession>
    <name>A0A2M9P799_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellum-specific ATP synthase FliI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">fliI</name>
        <name evidence="1" type="ORF">CNY89_20995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001946">
        <property type="protein sequence ID" value="PJN93412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5701" checksum="4389A0B419E5516D" modified="2018-04-25" version="1" fragment="single">MHPDFASLQREIARISNHRRVGRVVSLTPAALEVAGLTHQARIGDQVAIGARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E0</accession>
    <name>A0A2M9P7E0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001914">
        <property type="protein sequence ID" value="PJN93430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14212" checksum="2A8AADD5E3104557" modified="2018-04-25" version="1" fragment="single">MATIRVSSETEFTKALLTANGGDTILLKAGTYSDLDIKDNRQNDLDFSSTVTIRSEDPNNRAVINELFVQGASNIKISDVVLDYTGRQASDTESWLRGSPFAFKGTTDITLSGVEVKGHLVNGYGKDTGLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F2</accession>
    <name>A0A2M9P7F2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20780</name>
        <name evidence="1" type="ORF">CNY89_21755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002113">
        <property type="protein sequence ID" value="PJN93316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001896">
        <property type="protein sequence ID" value="PJN93440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7547" checksum="02D5C791E1B74186" modified="2018-04-25" version="1" fragment="single">AFGALQASLDLAYGHNDVAFDWEGDDDMHEVRGSGSAELLDDGSLEIEFEYHRGDDAILKAVRDTSSAAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I5</accession>
    <name>A0A2M9P7I5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MucR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001806">
        <property type="protein sequence ID" value="PJN93502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="94"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13206" checksum="C37A7889B5D0C721" modified="2018-04-25" version="1" fragment="single">DMIGAVFAKLTEISNDEKPLPATLTPAVPIKRSVTDDYIVCLEDGKKLKMLKRHLMTAYGMTPEEYRARWGLKPDYPMVAPTYAAKRQELAKKIGLGRKPRAPEPAAAPKGRTRKKAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J3</accession>
    <name>A0A2M9P7J3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF4212 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20295</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001798">
        <property type="protein sequence ID" value="PJN93507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019886">
        <property type="entry name" value="Na_symporter_ssu_prd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13937">
        <property type="entry name" value="DUF4212"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03647">
        <property type="entry name" value="Na_symport_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="DUF4212" evidence="2">
        <location>
            <begin position="9"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="10055" checksum="1EC9C1295478A6E1" modified="2018-04-25" version="1">MSVRQSDKSEYWRKNLGAIALCLTIWAIVSLGFGVLLARPLNAFSIGGYPLGFWFAQQGAIYVFIGLIFYYAWRMNRLDREFDVHED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L2</accession>
    <name>A0A2M9P7L2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20070</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001754">
        <property type="protein sequence ID" value="PJN93541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="142"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="5"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="18358" checksum="B3611E032A5C839C" modified="2018-04-25" version="1" fragment="single">MKYRREVDGLRTIAVLPVILFHGGFAAFSGGFVGVDVFFVISGYLITFLIIDEIGEGRFSIRRFYERRARRILPALFFVMLTCVPFAWALDDAVSVQGLFRGDRGGHALLFEHSLLASDGLFRSARRLNPLLHTWSLAVEEQFYVFFPLLMIFLWRFGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X6</accession>
    <name>A0A2M9P7X6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">DDE_Tnp_Tn3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_19315</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001597">
        <property type="protein sequence ID" value="PJN93652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="7">
        <location>
            <begin position="8"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="98"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="15001" checksum="A3C3E37380D83A7C" modified="2018-04-25" version="1">MSDWGHVSTYDDQQHRAAGCNLVVAAITLWNTVYLAAAVEALRRSGVDVPDDLLRHVWPLGWDHVTLTGDYRWSADNPKALDQLRPFASSVSAWQNPLNGDFGTATKPPYPTHSRLDAGRWTSRTPRLPPRRPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y7</accession>
    <name>A0A2M9P7Y7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19250</name>
        <name evidence="3" type="ORF">CNY89_20795</name>
        <name evidence="2" type="ORF">CNY89_22095</name>
        <name evidence="1" type="ORF">CNY89_25030</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003000">
        <property type="protein sequence ID" value="PJN92954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002205">
        <property type="protein sequence ID" value="PJN93279.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001899">
        <property type="protein sequence ID" value="PJN93438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001587">
        <property type="protein sequence ID" value="PJN93662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93279.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10444" checksum="6F1278BEDD4DB0E3" modified="2018-04-25" version="1" fragment="single">MDKRTSRYIEQWKLSDLQPLTRTFTSDLYKAQSKQGAVVLKVLTDAGAKDEKAAADVLELWGGRGAVQVWHHDEGALLLEYIPGSDLTELVRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P812</accession>
    <name>A0A2M9P812_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF772 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001585">
        <property type="protein sequence ID" value="PJN93663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008490">
        <property type="entry name" value="Transposase_InsH_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05598">
        <property type="entry name" value="DUF772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF772" evidence="2">
        <location>
            <begin position="62"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12817" checksum="1472327369AFA3A1" modified="2018-04-25" version="1">MATNGDPANAPRQARRRRAARHVPRDARGDPGSPARTAGAGPTYRLGAARPGLRRDLRRPVGRPGLPTRLMAGLHVLKHVKGLSDEAVCTAWVENPYFQAFCGERFFQHRLPSTAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P819</accession>
    <name>A0A2M9P819_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001578">
        <property type="protein sequence ID" value="PJN93669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044000">
        <property type="entry name" value="Phage_tube_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18906">
        <property type="entry name" value="Phage_tube_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="22430" checksum="226AA43404DB3C6F" modified="2018-04-25" version="1" fragment="single">MARAQGARALMALAFETTYGTPPASGFTRMPFASTSLGAEQPLLNSELLGYGRDPLAPIKDAVTADGDVVVPLDAEAFGFWLKAAFGAPTTTGTEAPYTHEFQSGSWTLPSMSIETGMPEVPRYAMYSGCVLDQITWQMQRSGLLTATARLVAQGETVGTTTSAGTPAALGLKRFGHFNGAITRNGTALGNVVSAEITYANNLDRIETIRSDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P823</accession>
    <name>A0A2M9P823_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">L,D-transpeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_19095</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001558">
        <property type="protein sequence ID" value="PJN93687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="38"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18740" checksum="8D715F990B9B00FC" modified="2018-04-25" version="1">MAQALEQGVAPEGGLRRRVSGSTSRRWQDHFDSVASDAILCDINDRTLHYWGADGSYRIYPTSVPMSDEMTRRGRTEIVMKRPTPEWSPTPSMIERNPDLPRYVGPGPDNPLGVRALNLGWRYYLIHGGSDIRKIGRQSSSGCIGLYNEHILEVYERAKVGTPVLVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P849</accession>
    <name>A0A2M9P849_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Homospermidine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001547">
        <property type="protein sequence ID" value="PJN93699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023181">
        <property type="entry name" value="Homospermid_syn-like_C"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5766" checksum="E2CE0211167FD20C" modified="2018-04-25" version="1" fragment="single">RCLEIQRPYLGRVEAHYTDWTPIATRWAQFAEEIDETDPWQFQNVLAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P881</accession>
    <name>A0A2M9P881_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001487">
        <property type="protein sequence ID" value="PJN93752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="41"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9569" checksum="128264B11F39750B" modified="2018-04-25" version="1" fragment="single">MARHLKTILLLAEGNTVAETAREVDFATRWVEELLSRYNERGPSALGDQRRTNGAQPRLLTPELLERLRRRLVDPPEDGGTWTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H6</accession>
    <name>A0A2M9P8H6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001423">
        <property type="protein sequence ID" value="PJN93820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10965" checksum="B8C066BACD30ABDF" modified="2018-04-25" version="1">MADLKLTPGLPGSNMVTLGFQTPDFAPLAPREVRVSFALPERGIEPIRLEALPAGDGLWRAGPVTLPLAGDWEVTLRLLITDFDQATLTETLSLGSTNPDRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I7</accession>
    <name>A0A2M9P8I7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001395">
        <property type="protein sequence ID" value="PJN93857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="8035" checksum="5740719D6B070751" modified="2018-04-25" version="1" fragment="single">MRIADDWQRPFLLDPIYPGAWRALAREPAGLLVQRLDELGMQPGNAAVDAVRVLKLPFYPRWILCDLQFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P8</accession>
    <name>A0A2M9P8P8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Antifreeze protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17650</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001354">
        <property type="protein sequence ID" value="PJN93908.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd03408">
        <property type="entry name" value="SPFH_like_u1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033880">
        <property type="entry name" value="SPFH_YdjI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13421">
        <property type="entry name" value="Band_7_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Band_7_1" evidence="2">
        <location>
            <begin position="1"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="144"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93908.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="24418" checksum="43F97A019233BFFC" modified="2018-04-25" version="1" fragment="single">KSEIYFVNTRRFTDLKWGTKNPILCRDPEFGMVRLRAFGSYTMRVADPSKFLTDIVGTDGEFTTQEIEFQIRNVIVTNFSQIIATSGIPVLDMAGNTIELAKLVQDRIAPKIAEYGLELPAFYIENVSLPPEVEAIGRLMTGSLAVPGPPQRTAPAGVSSAGRRRLGRRRRNPRGPGCRTRPGWRSRPCPCPCRRTARPGSPRPRPWTACCRYRRRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R3</accession>
    <name>A0A2M9P8R3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcription termination/antitermination protein NusG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17550</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001339">
        <property type="protein sequence ID" value="PJN93921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005824">
        <property type="entry name" value="KOW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043425">
        <property type="entry name" value="NusG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001062">
        <property type="entry name" value="Transcrpt_antiterm_NusG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015869">
        <property type="entry name" value="Transcrpt_antiterm_NusG_bac_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265">
        <property type="entry name" value="PTHR30265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265:SF2">
        <property type="entry name" value="PTHR30265:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00467">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00338">
        <property type="entry name" value="NUSGTNSCPFCT"/>
    </dbReference>
    <dbReference type="SMART" id="SM00739">
        <property type="entry name" value="KOW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82679">
        <property type="entry name" value="SSF82679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01014">
        <property type="entry name" value="NUSG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="KOW" evidence="5">
        <location>
            <begin position="47"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11098" checksum="31F2F29EEA6E543C" modified="2018-04-25" version="1" fragment="single">YHLISNTNRVTGFLGPQGKPSPMKDAEVARILNQVVEGQERPRSIITYQTGETVNVTDGPFEGFSGMVEEVDQSASRLKVSVSIFGRATPVELEFTQVAKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S1</accession>
    <name>A0A2M9P8S1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001332">
        <property type="protein sequence ID" value="PJN93931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14856" checksum="4FAFACF62820AD83" modified="2018-04-25" version="1" fragment="single">MTRAHWSNCITHFDKEVGTFVRDYFADAGRQCLLVAAAGFDPRSQVVARMLAETLGDRLCALFIREERGRPAANLVADADTNEAALAAIVPNCWVERIDIFGDDGAAIGGSRVAAMLSGTEIDPAITDIVLDMSALSIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W6</accession>
    <name>A0A2M9P8W6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glucose-methanol-choline oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001297">
        <property type="protein sequence ID" value="PJN93974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012132">
        <property type="entry name" value="GMC_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11552">
        <property type="entry name" value="PTHR11552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_oxred_C" evidence="2">
        <location>
            <begin position="8"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010790"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="18707" checksum="143535DB3BA4EFF5" modified="2018-04-25" version="1" fragment="single">LKAYTANTAGTVRLRSPNISDAPIVDFRYFDEGSPGWEADLDAVVAGVRFVRKIGDAMGDLVAEEEEPGRHRLSDAALRDYVRDNAWGHHACGTCAMLPRDREGVVDSRFRVHGVPGLRIADASVLPRIPGYFPVAAVYMIAEKAADTILEDLRLGTARPRRNTPEAVAPPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X5</accession>
    <name>A0A2M9P8X5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA--3-ketoacid-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001300">
        <property type="protein sequence ID" value="PJN93969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012791">
        <property type="entry name" value="3-oxoacid_CoA-transf_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02428">
        <property type="entry name" value="pcaJ_scoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="19288" checksum="007CE0606F592782" modified="2018-04-25" version="1" fragment="single">MPWTRDQMAARAARELEDGMYVNLGIGIPTLVANYIPEGVDVTLQSENGMLGIGPFPTEDEVDADLINAGKQTVSELPRTAYFDSSASFGMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVKRVVVIMDHANKAGESKVLKACTLPLTGKAVVDRIITNLGVLDVVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P981</accession>
    <name>A0A2M9P981_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001202">
        <property type="protein sequence ID" value="PJN94104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002110">
        <property type="entry name" value="Ankyrin_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036770">
        <property type="entry name" value="Ankyrin_rpt-contain_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48403">
        <property type="entry name" value="SSF48403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50088">
        <property type="entry name" value="ANK_REPEAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0040">ANK repeat</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="repeat" description="ANK" evidence="1">
        <location>
            <begin position="279"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="343" mass="37212" checksum="C395C879D4CBC206" modified="2018-04-25" version="1" fragment="single">GLVDPMIRSGKPAAAEYLLARADAFGAKHDHVFAKAVEYGKHEIVALYRKRGWALPASVETPPKSDGEAPTVSNTWVGAMGRTSEGWRELATVLLDWPEARALAADRIFEKSVEMGEAGVLRRFRDLGLPPPAPASAGSPGSGVAAAQLSWLPMLAKAQAGWRETMEVLLGWPAFREVAASELFEDAVARGHLDVSELFEHNGWPSPGRPKEKPGWAWVIGKGLPQRDALTRALLDWPDTPPNPDGEHRLMNLAAESGLVQTLAELIRRGEPIDVTERANETPLSAAVVNAQWAAARLLLQAGADPNLLTGRRHEPVFFRAAFTATPLLREHGADLRRRALDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A8</accession>
    <name>A0A2M9P9A8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16540</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001206">
        <property type="protein sequence ID" value="PJN94099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="14"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="3">
        <location>
            <begin position="147"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="23462" checksum="15D613796AB3FA15" modified="2018-04-25" version="1" fragment="single">MRLEDAPEIRRLALFATMADSAFEALVRGAYLQTFPPQVHLIAEGDKPDFLHVLIEGSVEMFATWNRHETTMAMLRPVTTFIPAAAITDRANLMSARTLSKSRIALIPAEDVRRAFREDPSFAVAMANELAIHFRSVTKHVKELKLRSSIERLAAYLLRLDAETGMTGSFLLPYEKRQLAAYLGMTPESLSRALASLRPYGVSVDQAEII</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G5</accession>
    <name>A0A2M9P9G5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YceI domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001141">
        <property type="protein sequence ID" value="PJN94187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007372">
        <property type="entry name" value="Lipid/polyisoprenoid-bd_YceI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036761">
        <property type="entry name" value="TTHA0802/YceI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04264">
        <property type="entry name" value="YceI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101874">
        <property type="entry name" value="SSF101874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YceI" evidence="1">
        <location>
            <begin position="72"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18422" checksum="6D01EACFDA853C65" modified="2018-04-25" version="1">MRVARRRQFRAQQSRLRTGEGRYNLFGRPKRNALALRTLTVVRPAGEPSIMLRAVFCLLLALGAPPAQAAAWRLDPETQVVVDVPWRGSDVAVRFPDLRGEVTFDEKAPETARARIEASAAGAETGVGVVNALIRSPGYLDAEAFPVIAFQLDRLRRLSKSTRGSRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L4</accession>
    <name>A0A2M9P9L4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MerR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001107">
        <property type="protein sequence ID" value="PJN94234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13411"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6267" checksum="C8D38A8BD51DDFA5" modified="2018-04-25" version="1" fragment="single">MNIRDLTRRTGIAERQVRYLIAEGFVPAPVGGRATADYGPEHVAAIRRYARLRDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P5</accession>
    <name>A0A2M9P9P5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001082">
        <property type="protein sequence ID" value="PJN94267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="25259" checksum="D4C4D53D96653F81" modified="2018-04-25" version="1">MGRLEGKTALVTAAAQGIGRATALAYAREGARVIATDINEAGLADLAGDRLRVARLDVRDKAAVTAAAEEFGPVDVLFNCAGFVASGSILDCDEEQWAFSVDLNMTSLYRMCRAFLPGMLARGAGSIINVASVVSSIIAAPNRFVYGATKAGVIGLTKGIAADFIQAGIRCNAICPGTVESPSLEARLTATGDYAAARAAFVGRQPIGRIGKPEEIAALAVYLASDESSYTTGVAHAIDGGWSNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q4</accession>
    <name>A0A2M9P9Q4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Chitooligosaccharide deacetylase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Nodulation protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15465</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Is involved in generating a small heat-stable compound (Nod), an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in various plant protoplasts.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the polysaccharide deacetylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001077">
        <property type="protein sequence ID" value="PJN94275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0536">Nodulation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NodB homology" evidence="6">
        <location>
            <begin position="64"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="292" mass="31652" checksum="6D599BA542EEEEB0" modified="2018-04-25" version="1">MLKSHGRHPYVPITRKTAGTWPNGARLAVYFALGVEEYAFGEGLTENLLPGVPHPDLANASWRDYGNRVGAFRILDHFRRAEVPLAVLLNTAVYDHAPELTRALSAAGCEIVAHGISNSDTLNGMAEATEAAYLAAVREAIRAREGRPPLGWSSPWLAQTPNTLDLLKEAGYGYVLDLGLDDRPVWLTTRSGPLLHIPYALELNDSSTAIGRLASGRDFAAMIVDQFDEMLASADQPLVMSVVLHSFISGQPFRLRALSEALAHVVRRRDSVWLTTPGAIHAEAVSGADVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R8</accession>
    <name>A0A2M9P9R8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Excinuclease ABC subunit C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001085">
        <property type="protein sequence ID" value="PJN94262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003583">
        <property type="entry name" value="Hlx-hairpin-Hlx_DNA-bd_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="SMART" id="SM00278">
        <property type="entry name" value="HhH1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HhH1" evidence="1">
        <location>
            <begin position="22"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="HhH1" evidence="1">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8015" checksum="CC81D93B76621136" modified="2018-04-25" version="1" fragment="single">DEAHRFAIGRIGRSGPRAARVTPIDEIPGVGPSRKRALLAHFGSAKAVSRAGLADLKAAPGISDALAEAIHAFFQGDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S5</accession>
    <name>A0A2M9P9S5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MFS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15345</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001063">
        <property type="protein sequence ID" value="PJN94294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="165"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="7"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="20411" checksum="CECB02C3EF382F2D" modified="2018-04-25" version="1" fragment="single">MSVARSELLSLRGVFFLNAVGIAVWFPRIPDVKAALGLDVLTLAFCLFGLPLGTMLGFLTVSRLTTRIGLKAATIWGGAAFLLSFIGPALAWNAPSLAATLMLSGLCIALIEVAMNAKASQTEAASGRRIMTGCHAFWSFGSVSGALLGGAFAQGGFSFLSQQLIVQPIFALATIWFGCRLLADAPRTEEARRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T2</accession>
    <name>A0A2M9P9T2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001073">
        <property type="protein sequence ID" value="PJN94282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11483" checksum="3B609B50F292BE58" modified="2018-04-25" version="1" fragment="single">MARKPSALAGIFDDEPEMPSVPIETAAIESQLEANAKQSVTQKPRQSGVAPVPARRSSHPGKKPVLIHIPEDMHRALRQLSVEEGGEPLTVITERLLRQYLVKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V5</accession>
    <name>A0A2M9P9V5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cytochrome B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15265</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001055">
        <property type="protein sequence ID" value="PJN94309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011577">
        <property type="entry name" value="Cyt_b561_bac/Ni-Hgenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01292">
        <property type="entry name" value="Ni_hydr_CYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="44"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="82"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="142"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Ni_hydr_CYTB" evidence="4">
        <location>
            <begin position="7"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="179" mass="19249" checksum="C0F4CDD530173A3A" modified="2018-04-25" version="1">MRTHGGYGVGARVFHWVTVLLVFSTIPIGLVMTQDLPRPTQNTLFTLHKAIGIILLLTIVARLAWRLSKGAPPPPDLPRAQLLAATTVHWALYLLVFAMAVTGYVRVVSGGFPIEVLNAIGVPPLLPKNEALASAAKVAHETIAWVLIATLTVHVAAAAYHGLVRKDGVVSRMWPPFSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z0</accession>
    <name>A0A2M9P9Z0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heavy metal translocating P-type ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15045</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001033">
        <property type="protein sequence ID" value="PJN94349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006811">
        <property type="term" value="P:ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="32"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="134"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="287"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="315"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="400" mass="41953" checksum="1D687197C5AF830B" modified="2018-04-25" version="1" fragment="single">GQGGAIRPGEDATVLPDATDRKADEAAGLRRLALVAGLLTLPVFVLEMGSHMSMAVHMWVMDTLGMETSRLIQFALTTLVLAGPGRRFYTKGFPALFRGQPDMNSLVALGSAAAWGYSVVATFAPQVLPVEAQVVYFEAAAVIVTLILVGRFMEARAKGRTGEAIRRLVGLQARTARVERDGAVAELPIEDIRVGDVIQVRPGEKIAVDGLVLSGSTYVDESMITGEPVPAAKGEGARVVGGTVNRTGAIRFRAEKVGADTMLAQIIRMVEQAQGAKLPIQGLVDRITAWFVPAVILVALATVGVWLAFGPGLTQALVAGVAVLIIACPCAMGLATPTSIMVGSGQAAELGVLFRKGDALQSLQEARIVAFDKTGTLTAGRPELTDLIAAEGFDEAEALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA73</accession>
    <name>A0A2M9PA73_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000972">
        <property type="protein sequence ID" value="PJN94445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="82"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11540" checksum="4296FC4BBAFB68C9" modified="2018-04-25" version="1">MRGLLTLDDLREAVAEGTIDTVVVAQVDMQGRLMGKRLQAEFFLESGWREIHSCNYLLSTDLEMDTVPGYREAGWATGYGDHVMRPEDREDGAAHQNRAETPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA88</accession>
    <name>A0A2M9PA88_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrous oxide reductase family maturation protein NosD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000984">
        <property type="protein sequence ID" value="PJN94431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006633">
        <property type="entry name" value="Carb-bd_sugar_hydrolysis-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026464">
        <property type="entry name" value="NosD_copper_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007742">
        <property type="entry name" value="NosD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022441">
        <property type="entry name" value="Para_beta_helix_rpt-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05048">
        <property type="entry name" value="NosD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00722">
        <property type="entry name" value="CASH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="8"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04247">
        <property type="entry name" value="NosD_copper_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03804">
        <property type="entry name" value="para_beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CASH" evidence="1">
        <location>
            <begin position="5"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="CASH" evidence="1">
        <location>
            <begin position="103"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="353" mass="37554" checksum="B1254A6E050E32CE" modified="2018-04-25" version="1" fragment="single">VRDLAIRGSGSDRAAMDAGVNLLKGATGAVVEDNTLLGNLHGVRIQGAPDATVRGNTITGRTGRQSEAGNGVSVWNAPGALVEGNAIRLGRDGIFSNASKHDVFRGNRMEKTRFAIHYMYTNDSVIEDNVSIDNTVGYAIMFSDRLKISGNVSDGDRDHGLLLNAANRSEVTGNRVTGRLLPAARWFTGEKGADDMAPASDAPAAGDRLGPEKCLFIYNANRNVLAGNRFEGCEIGIHFTAGAEGNAVSGNAFIGNRTQVKYVGSRTLDWSKDGRGNYWSDNAAFDLDGDGIADAAYRPNDIIDRVMWTAPQARLLVTSPAVQVIRWAQSRFPATLPGGVLDSAPLMAPPVIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS2</accession>
    <name>A0A2M9PAS2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000859">
        <property type="protein sequence ID" value="PJN94635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="458" mass="51725" checksum="2045179A437022CE" modified="2018-04-25" version="1" fragment="single">AYLHERETFEDAESFHFARQFRDHGKLYDAFEVELENQVALDAAAIDEKVLASKIKGMLELKPEISCTVKALDLPATDTHPASIMLIVRHGGPLSSVYDHRQDGRRGTIYYRPPNEATLIYTPSMRQIEVCADSPVVRQTVSDSFAEVALGHDISQKPLTWKRYNLSRFRSSLLLQPPEIEGYAFEFARVIEAEIRLGTWRRKLQLKVTVDDDIQEVADRYLGARNIFRRAEAFSRITIAVAYNLIGDDKQRTLNITIAGTKSCNLQSKPDPEERSLGFALLKEWGILSAFRQIGHDDLRAIFPQLVQLHDRIEDEVSGSYLLELGLDPKRLIEGGLLERRDRQDVVLIEDDDVDGEGAVKPSATEGMIHAVGPFGEDVGKRPASDVEMFAVNAQWLHETLMRLMKPLLSKRAAQILNPDLTLVGAIQIDEADVPVYFARRLNDPKAAQRLDLMLRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT8</accession>
    <name>A0A2M9PAT8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">OMP_b-brl domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000846">
        <property type="protein sequence ID" value="PJN94653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027385">
        <property type="entry name" value="OMP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13505">
        <property type="entry name" value="OMP_b-brl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014637787" description="OMP_b-brl domain-containing protein" evidence="1">
        <location>
            <begin position="43"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="domain" description="OMP_b-brl" evidence="2">
        <location>
            <begin position="28"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="26516" checksum="892E17556FF6A71D" modified="2018-04-25" version="1">MTDGDGRGRTGARRPSEFEEKMKMSRTILACLCALAASSAAAQEGGWSYAATGYAWLPGVATTTDTAFGEVESTISAGDALSSLEFGFMGAVEARRDRWGLIGDLIYTDTSTSSSTPGGHLFSKGIVDTQFTVLTGYAAYRVAQSDQASFDIAAGFRLFSTDIDGKLKGELLETRTFGGSETWVVPLIGARAILPIAERWTATLVGDVGGTGSDEMTWQAMASVSFAFRENWSAILAYRYLRAQLEKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY4</accession>
    <name>A0A2M9PAY4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Metallophos domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000822">
        <property type="protein sequence ID" value="PJN94700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="9"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="158"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="193"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="30702" checksum="CD51CE8D51BC58C4" modified="2018-04-25" version="1">MTDLTEGQRLYAIGDVHGRLDLLEDMLARVRNDLAVRPHDRPRVICLGDYVDRGPDSRGVIEALIALKASDLPAQFLLGNHDSYIDAYLNGSPLVRSYLSLAALGHGRRRDPRLLRRGRGERGGAGRDPRRLRESLPRQSPRFPRRLRLVGPDWRLCLRPRRHSPGRAARGSDARRLHLDPRAVPVLQRRLRLQGRPRPHHRARRPAPAQPHLHRHRRRQGRTAHLPRAGGRRGRDAPGRRPAPPAPRLRPWRGRNPVAPVGPLALIPQSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB77</accession>
    <name>A0A2M9PB77_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">N-acetyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_12355</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000767">
        <property type="protein sequence ID" value="PJN94796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044772">
        <property type="entry name" value="NO3_transporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23515">
        <property type="entry name" value="PTHR23515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00583">
        <property type="entry name" value="Acetyltransf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="138"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="194"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="224"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="255"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="N-acetyltransferase" evidence="7">
        <location>
            <begin position="67"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="339" mass="37008" checksum="A262E79F54092672" modified="2018-04-25" version="1" fragment="single">MPGPGVALGAVHAAEGQHVVHRPHALVHARRRRCARPSACGRLALRLFRRDPRSGALAPHLPPRPRVVAQDARRARQRGCSGSSDRQVVAYALIGRSRAGAGGEIWELYVHPDCHGAGYGRSLFEIARDQFTAYGWEAVAHVWAIGLAIMAIVFFVFAKDDPTFARRKAEGGKPPSFIAQLEPLKKLQVWRFSLYYFFVFGGFVALALWLPNFLVNVYGVNVKVAGSAAAAFSLSASLFRAYGGHLSDRFGARTVMYWTFGFSMVFLFMLSYPPTDYVIHGRDGAIAFSTQMGLWPFIAAIFGLGFFMSLGKAAVFKHIPVYYPENVGAVGGLVGLVGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA5</accession>
    <name>A0A2M9PBA5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Indolepyruvate ferredoxin oxidoreductase</fullName>
            <ecNumber evidence="1">1.2.7.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.7.8" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000756">
        <property type="protein sequence ID" value="PJN94817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043805">
        <property type="term" value="F:indolepyruvate ferredoxin oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="344" mass="38317" checksum="5B5F604B5E29ACF5" modified="2018-04-25" version="1" fragment="single">MAGTAEKGGVLVCMGDDHTGESSTVLHHSEFALVDVMMPILSPAGVQEVLDYGLLGWALSRYCGCWVGLKCVKDTIEVTQVVDGDPFRLNIVTPTDFHMPESGLNIRLGDDPVSQEARLHDYKRFAAEAFGRANRIDRRMHGDDRARIGIVSSGKSWLDVAHALDLLGLDDAECRRLGIATYKVGMVWPLDMASFREWAHDLEHIVVVEEKRKLIEVQIKEAIFDDRRGRRVTGWKNERGEVVFSVKKSLDPVAIARVLEDILAEDGLETETLIERRKVLAEATRADNALDIAVRKPWFCSGCPHNTSTRLPEGARAYAGIGCHYMVQWMDRETSGFTHMGAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE6</accession>
    <name>A0A2M9PBE6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribosomal protein S12 methylthiotransferase RimO</fullName>
            <shortName evidence="7">S12 MTTase</shortName>
            <shortName evidence="7">S12 methylthiotransferase</shortName>
            <ecNumber evidence="7">2.8.4.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Ribosome maturation factor RimO</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rimO</name>
        <name evidence="11" type="ORF">CNY89_11990</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[sulfur carrier]-SH + AH2 + L-aspartate(89)-[ribosomal protein uS12]-hydrogen + 2 S-adenosyl-L-methionine = 3-methylsulfanyl-L-aspartate(89)-[ribosomal protein uS12]-hydrogen + 5'-deoxyadenosine + [sulfur carrier]-H + A + 2 H(+) + L-methionine + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:37087"/>
            <dbReference type="Rhea" id="RHEA-COMP:10460"/>
            <dbReference type="Rhea" id="RHEA-COMP:10461"/>
            <dbReference type="Rhea" id="RHEA-COMP:14737"/>
            <dbReference type="Rhea" id="RHEA-COMP:14739"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:29917"/>
            <dbReference type="ChEBI" id="CHEBI:29961"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64428"/>
            <dbReference type="ChEBI" id="CHEBI:73599"/>
            <dbReference type="EC" id="2.8.4.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="7">Binds 2 [4Fe-4S] clusters. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the methylthiotransferase family. RimO subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.4.4" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000730">
        <property type="protein sequence ID" value="PJN94855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0103039">
        <property type="term" value="F:protein methylthiotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018339">
        <property type="term" value="P:peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01865">
        <property type="entry name" value="MTTase_RimO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005839">
        <property type="entry name" value="Methylthiotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013848">
        <property type="entry name" value="Methylthiotransferase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038135">
        <property type="entry name" value="Methylthiotransferase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005840">
        <property type="entry name" value="Ribosomal_S12_MeSTrfase_RimO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041582">
        <property type="entry name" value="RimO_TRAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002792">
        <property type="entry name" value="TRAM_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43837">
        <property type="entry name" value="PTHR43837"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18693">
        <property type="entry name" value="TRAM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00919">
        <property type="entry name" value="UPF0004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00274">
        <property type="entry name" value="ribosomal_protein_S12_methylth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00089">
        <property type="entry name" value="TIGR00089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01125">
        <property type="entry name" value="TIGR01125"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51449">
        <property type="entry name" value="MTTASE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50926">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="11" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 7 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTTase N-terminal" evidence="9">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="Radical SAM core" evidence="10">
        <location>
            <begin position="124"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="domain" description="TRAM" evidence="8">
        <location>
            <begin position="364"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="6"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="42"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="71"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="142"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01865"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="430" mass="47438" checksum="4C399D3168EB27A1" modified="2018-04-25" version="1">MVSLGCPKALVDSERILTRLRAEGYAISPDYQGADAVIVNTCGFLDSAKAESLEAIGEALAENGRVIVTGCLGAEEGAIREVHPSVLAVTGPHQYEAVLDAVHLAVPPKPDPYLDLLPESAVRLTPRHYAYLKISEGCNHKCRFCIIPDLRGPLVSRPAHAVLREAEKLVAAGVKELLVISQDTSAYGLDRRHDLHPWKGGEVRSHITDLSRELGRLGAWVRLHYVYPYPHVRDLIPLMAEGLVLPYLDVPFQHSHPDVLRRMARPAASAKTLDEIARWRAVVPDLTIRSTFIVGYPGETEAEFQHLLDWLDEAQLDRVGCFQYEDVRGARANALPDHVAPEVKQERWDRFMATAQAISEAKLEAKVGRRLPVIVDAVDAKGATCRTQADAPEIDGNLFIDEGFEGLAPGDVVEVEVEEAADYDLWGRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ4</accession>
    <name>A0A2M9PBJ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000699">
        <property type="protein sequence ID" value="PJN94913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140098">
        <property type="term" value="F:catalytic activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6619" checksum="3BDF40393161C018" modified="2018-04-25" version="1" fragment="single">PALAGFPRQALHAASLGFRHPLTGAELRFEAPPPADFAGLLTLLRRNDAPDTFQDPYGVLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR2</accession>
    <name>A0A2M9PBR2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ribonuclease VapC</fullName>
            <shortName evidence="5">RNase VapC</shortName>
            <ecNumber evidence="5">3.1.-.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Toxin VapC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">vapC</name>
        <name evidence="7" type="ORF">CNY89_11260</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Toxic component of a toxin-antitoxin (TA) system. An RNase.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PINc/VapC protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.-.-" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000669">
        <property type="protein sequence ID" value="PJN94971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090729">
        <property type="term" value="F:toxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00265">
        <property type="entry name" value="VapC_Nob1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002716">
        <property type="entry name" value="PIN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022907">
        <property type="entry name" value="VapC_family"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01850">
        <property type="entry name" value="PIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0800">Toxin</keyword>
    <keyword evidence="1 5" id="KW-1277">Toxin-antitoxin system</keyword>
    <feature type="domain" description="PINc" evidence="6">
        <location>
            <begin position="2"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="5"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13792" checksum="368CAC07C3EA51A6" modified="2018-04-25" version="1">MILVDTSAWIEWLIGSPTGEKLSEHLPEQGEWLVPTMVQLELAKWLTREVGEDKADQVIAFTQVCHVVPLDTEIALAAAESCREHKLATADAIIFATARAQGAMLLTCDAHFEGLPGVTLIEKIRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT3</accession>
    <name>A0A2M9PBT3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000650">
        <property type="protein sequence ID" value="PJN95010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="455" mass="50091" checksum="8DF353E68FA7FB23" modified="2018-04-25" version="1" fragment="single">AIAKFLHDLGYNTGEFGKNHLGDHTDALPTAHGFQEFWGYLYHLDAMQGVSFPDINSSPTEQTVAPVCRNTPIPGLADDPNAVDPLTTPCLTPPRPVLACTSSDGTAANQTCKDEGPLTLERSKTVDEEISAKVVDFLDRNDPEKTDKPFFVWYNPARMHITTVLSDKYWNMVGAPGGKDWGVNEAGMKQMDDNIGVVLDKLEAMGELDNTIVVFTTDNGAETITFPDGGVTPFKGGKLSTWEGGMRAPMVVRWPGHIAPGTIKTDIFASLDWLPTLVDIAGGPKNNDLKATIEKGEYEGIVKTTLDGVNQRAYLLGESEKSARDTFFYYSGKDPSAVRYKNWKMYFAMVSDDPTGFLAGVMPYHWTQVVNIKRDPFETSIGEQVKTLTGMGGALAGPVTAYVYDWNMLPIGQALWLRELETYNMYPPMQDPASYNLDQVLAQVQAMKNQPHPSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW0</accession>
    <name>A0A2M9PBW0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 8">Corrinoid adenosyltransferase</fullName>
            <ecNumber evidence="5 8">2.5.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Cob(II)alamin adenosyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Cob(II)yrinic acid a,c-diamide adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cobO</name>
        <name evidence="11" type="ORF">CNY89_10980</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>2 ATP + 2 cob(II)alamin + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)alamin + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:28671"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16304"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>2 ATP + 2 cob(II)yrinate a,c diamide + reduced [electron-transfer flavoprotein] = 2 adenosylcob(III)yrinate a,c-diamide + 3 H(+) + oxidized [electron-transfer flavoprotein] + 2 triphosphate</text>
            <dbReference type="Rhea" id="RHEA:11528"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18036"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="ChEBI" id="CHEBI:58503"/>
            <dbReference type="ChEBI" id="CHEBI:58537"/>
            <dbReference type="EC" id="2.5.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Cofactor biosynthesis; adenosylcobalamin biosynthesis; adenosylcobalamin from cob(II)yrinate a,c-diamide: step 2/7.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the Cob(I)alamin adenosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.17" evidence="5 8"/>
    <dbReference type="EMBL" id="PHNO01000645">
        <property type="protein sequence ID" value="PJN95021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148">
        <property type="reaction ID" value="UER00233"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008817">
        <property type="term" value="F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006779">
        <property type="term" value="P:porphyrin-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00561">
        <property type="entry name" value="CobA_CobO_BtuR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003724">
        <property type="entry name" value="CblAdoTrfase_CobA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025826">
        <property type="entry name" value="Co_AT_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12557">
        <property type="entry name" value="Co_AT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02572">
        <property type="entry name" value="CobA_CobO_BtuR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015617">
        <property type="entry name" value="Adensltrnsf_CobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00708">
        <property type="entry name" value="cobA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Co_AT_N" evidence="10">
        <location>
            <begin position="4"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005121"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR015617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="204" mass="22216" checksum="7B62E62841327F99" modified="2018-04-25" version="1">MPEIDDEAADRHKAKMAKRKAVQDAEVAGKTREKGLLIVHTGPGKGKSTAAFGLALRMLGHGRRVGVVQFVKGAWDTGERRALAAFGDRIVWRSMGEGFTWETQDLRRDVAAAERGWAEARAMMADPTIGLVVLDELNIALRYAYLDLAAVTADLASRRDGLHVVVTGRNARPELLAVADLVTEMTLVKHHFADGVKAQAGMEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX0</accession>
    <name>A0A2M9PBX0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH lacI-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000651">
        <property type="protein sequence ID" value="PJN95009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14188" checksum="52310654492DC05B" modified="2018-04-25" version="1">MRMATLKDISRRLNLSVTQVSRALNGHADVNEETRQRVMDAAKALNYHPNLTARKLVSGRSGVVGFVMTRYSRLASDGFLLETFAGLSQQFSERDMQFVLHIAQEGDRIVEVYRKLNEAGSLDASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC37</accession>
    <name>A0A2M9PC37_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0386 protein CNY89_10540</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0386 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000610">
        <property type="protein sequence ID" value="PJN95093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00827">
        <property type="entry name" value="UPF0386"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018654">
        <property type="entry name" value="YjhX_toxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09857">
        <property type="entry name" value="YjhX_toxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11826" checksum="C6CC84E3DA632AD3" modified="2018-04-25" version="1">MRQHPGVSSRPSHETFMNISRHEQRALHVLALGGRILHEREEAPRIVAVTCVTREGMILADFDLTTFHRLRRKRLIESRSGSPYRISKRGRVCVRAQPDNQGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK5</accession>
    <name>A0A2M9PCK5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000520">
        <property type="protein sequence ID" value="PJN95276.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95276.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="27858" checksum="89C2FDCB7092311F" modified="2018-04-25" version="1">MHPGLDVRGEQGLALRCPMVLRAAGPEDYAWNPATDQRDLAEGEDVPGFVPDLAMPGVITAVSGSAAALGSGGSATPRIRFSFDPADSERVGSYSWEYRIVGRTWADGGRIDARVRDGSGKVFGYLHPVLVGEVYDVAVWSRADGDESERRVYSGVVALAADVVLEPPVIVAAVGGTAQITLTIRTPNSFYIRALRVYASASTDPLTAVEITVDPIAATPNWTFNYVDSGLTAGATWHYWTRIEGPYGALSELSARVPATAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP0</accession>
    <name>A0A2M9PCP0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000507">
        <property type="protein sequence ID" value="PJN95310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000120">
        <property type="entry name" value="Amidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023631">
        <property type="entry name" value="Amidase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036928">
        <property type="entry name" value="AS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11895">
        <property type="entry name" value="PTHR11895"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01425">
        <property type="entry name" value="Amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75304">
        <property type="entry name" value="SSF75304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Amidase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="319" mass="34100" checksum="84154D64829DEB39" modified="2018-04-25" version="1" fragment="single">GTDTGGSIRQPAAFTGLVGVKPTYGRCSRWGIVAFASSLDQAGPIAKTVTDAALMLTAMAGHDPKDSTSADLPVPDFAAGLTGDLRGKRIGVPKEYRVEGMPADIEALWSDGADKLRDAGAEIVEISLPHTKYALPAYYVIAPAEASSNLARYDGVRYGHRAKIGAQEGITQLYERSRAEGFGREVQRRIMIGAYVLSAGFYDAYYTRAQKIRTLIRRDFETAFGEVDAILTPATPSAAFGIGEMAEADPVQMYLNDVFTVTVNLAGLPGVSVPTGLDHAGLPLGLQVIGRPWDEAGMLDVALALEKACGFSAKPERWW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR1</accession>
    <name>A0A2M9PCR1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000508">
        <property type="protein sequence ID" value="PJN95308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11082" checksum="3C6202D8083EBD88" modified="2018-04-25" version="1">MTILAKATADALVYETGFQRVSFHPGDEIEPAIPSRSIQLAGAVIPGGYEATAVVQIKIITAAVIDGYLTLDQAEKIIRDLQAAVAAARAGQAAAMKAIDERPSFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT0</accession>
    <name>A0A2M9PCT0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000507">
        <property type="protein sequence ID" value="PJN95312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6905" checksum="37CC9F7934D315DD" modified="2018-04-25" version="1">MLFGATSIWLHVAIATPITLLAAVLSWRLVEEPALKLLKGEGLQRLEDSLPPRLMEINRLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT7</accession>
    <name>A0A2M9PCT7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MACPF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09005</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000489">
        <property type="protein sequence ID" value="PJN95350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020864">
        <property type="entry name" value="MACPF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01823">
        <property type="entry name" value="MACPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MACPF" evidence="2">
        <location>
            <begin position="210"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="443"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="27"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="461"/>
            <end position="492"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="492"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="492" mass="53760" checksum="012CFEA3637A120D" modified="2018-04-25" version="1" fragment="single">MAEPPPQPDEVVSPDAKWPPYSKIDTGKHMGELKPVIEFPPEKEVPDRTADATGFGPGESKERQDILSELSEGQRIRLLAANGIDLRDRRASGQGALRAYVLDSTLTTAIEEAVLFTKVICRTDNTDSDRYDRVSFSYTETAANLQRQSVARTTSSFGVPGIFRLDGSWSNAVAMAETRKDVHIHFEASQILPKAHIVFDIRDLAPSERLLEEVESASRKSALALLAVFKRFGHFVPLSLIVGGRMILTKTTELHADSQFKATETQLKAAAGARFSVEGVPVEADGGGGMGTWEKEGQSAIAQSMTLDLDSKGGIPAYASSREKEAGARWVDSVGPWQRWHVIGFDKEALVPITDFLPEDLKARCLDLLRGYFAAQLLPEKGLSAGPHGDDIYGPDPETLRRVKRIKEIVINHGENFDGLKWTCELYPYGGKPTELVIGDPDGGNGLGRWRGEHTDRITLPKTRSSPASRRDATATTGRCARSPSRPTSAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB4</accession>
    <name>A0A2M9PDB4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07905</name>
        <name evidence="1" type="ORF">CNY89_21365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002030">
        <property type="protein sequence ID" value="PJN93365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000410">
        <property type="protein sequence ID" value="PJN95537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8522" checksum="FFB4A6662CC69B20" modified="2018-04-25" version="1">MALVEQNVMRRLCGEIRRQEGLPGFDEIPLTAAEAEAFWTLHGGIFYYGVRREAFVAQSVDCLLAALLAAARAALPVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB5</accession>
    <name>A0A2M9PDB5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08050</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000420">
        <property type="protein sequence ID" value="PJN95513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="3">
        <location>
            <begin position="511"/>
            <end position="661"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="435"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="661"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="661" mass="72047" checksum="90DD5DCD5CD0CF26" modified="2018-04-25" version="1" fragment="single">MIFDFAHDADGVTLRLRTPKTKALFGFLTPRPAPRDLDRLGPEDRALALAIADLRSLADDHPGELEIAGDTIRMSHRIAAGLDGEAAATLGLPPLVDLILRTDVEGVLGAPSFRLHHEWVRDGRRQSVRREGAFLRTSGGLRRLPLWLLGAVEVAEGFSSDRNDAAHWEALARFRQALDPGVGIGEETQAGRVSMSDFLAGLEVRLADCFAITPNGAADDFEVVPFSGSRLEGLTDEVGETHGELRGSELHTFQQRIRERGALPAYRLGRGSFLVVDRAAMPTLRMMADVQREPTAARKAFIANPRARITETIESSLRATGALEDLAPEAQEEAIEALAGPMFVETREFSERVLGIRVYEPPLMDFGQTSGTSWMPEIFSEQIARVLEGLPTEDLEALCDAVEAAMETGQESVTIGAEQIAASREALSALRSIMTARQTASPSDEETSGERTGASDPAKGPVIVDAATNFEGQVWRPRISQRAATRTPAPLSGIRTRLKPHQISSLTWQIDSWSAGAAGVLNADEQGLGKTLQTLAFLVWLKTRLAEERRGGPILVVAPTSLLKNWEQEADRHLEAPGLGYLLRLYGSGLGAVRRPGQNAETKHGDETLDFARLRDDIAEGQGHRTWILTTYTTLVNYQHSLARLPLSAVVFDEIQALKNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF9</accession>
    <name>A0A2M9PDF9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000386">
        <property type="protein sequence ID" value="PJN95585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007332">
        <property type="entry name" value="DUF411"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04214">
        <property type="entry name" value="DUF411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014870601" evidence="1">
        <location>
            <begin position="22"/>
            <end position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16482" checksum="5E036850BF5FEB7E" modified="2018-04-25" version="1">MNRRTVLIACVAAALPSPSSAAVPTIHVVKGTGCECCEQWAAYLRENGFAVTDEEQYGMLLIRFKMEQGVPPKAYSCHTGMVEGYTLEGHVPAADIRRLLAERPQAVGLAVPGMPYGSPGMGPESEREAYDVFLIGKDGSMQIYSSYPQRNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL0</accession>
    <name>A0A2M9PDL0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">TonB-dependent siderophore receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_07505</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the TonB-dependent receptor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000380">
        <property type="protein sequence ID" value="PJN95602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015344">
        <property type="term" value="F:siderophore uptake transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0038023">
        <property type="term" value="F:signaling receptor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012910">
        <property type="entry name" value="Plug_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037066">
        <property type="entry name" value="Plug_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039423">
        <property type="entry name" value="TonB-dep_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000531">
        <property type="entry name" value="TonB-dep_rcpt_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010916">
        <property type="entry name" value="TonB_box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036942">
        <property type="entry name" value="TonB_rcpt_b-brl_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010105">
        <property type="entry name" value="TonB_sidphr_rcpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32552">
        <property type="entry name" value="PTHR32552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07715">
        <property type="entry name" value="Plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00593">
        <property type="entry name" value="TonB_dep_Rec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01783">
        <property type="entry name" value="TonB-siderophor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00430">
        <property type="entry name" value="TONB_DEPENDENT_REC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="4 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 11" id="KW-0675">Receptor</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 8" id="KW-0732">Signal</keyword>
    <keyword evidence="3 7" id="KW-0798">TonB box</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857795" evidence="8">
        <location>
            <begin position="28"/>
            <end position="725"/>
        </location>
    </feature>
    <feature type="domain" description="Plug" evidence="10">
        <location>
            <begin position="76"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="TonB_dep_Rec" evidence="9">
        <location>
            <begin position="272"/>
            <end position="723"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF07715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="725" mass="80024" checksum="65097BC42FF12DA0" modified="2018-04-25" version="1">MTRSPLSLSTRALLLLGAAALWTPALAQETAETAGSESGLLLDTLEVTAAPGTTTEGTGSWTTDWMRTSTGLTLTQRETPQSTSVVTSAQMQDRGLDSIRDVMETAAGITVQAYETNRVNYYSRGFLIDNYQYDGVPTTIDSVWNFGDGNMDMAIYDHVEVVRGAAGLTQGIGNPGGAVNFIRKRPTAERQLSSVATFGTDQFVRGDIDFGGPITENGRVRGRFVGAAQTREASIDLYEEDLNVLYGVLEADVGDSTIVSIGANRQETNPTGVTWGGLPTWNGDLEVIDWPDGSTTAADWTEYPTTMTEVFGSVEHILQNGWTSRVAVNYLDNDFDAKLLWLSGLPDAETGLGMGAGPARYQGSREQLSGTATLNGGFQAWGRDQEFVLGLYASDKTARTHGIGFDAADVPEVGNFWNWDGSFPEPTWTGRNGWIGHSDATQAAVYGTVRLRPTEALAVIAGVRANWWDGTERSATRTYQYEYKGELTPYLGATYNLTSNIDAYASVTSIYQPQLVQDVNEDYLDPTYGWNYEAGVKGSFFDDRLYASAAVFRTEQKDYANYLYYDEADERSIYEQIDGTTTNGFELETAGAITDRWQVTGSFTYRESEDDQGRQLQRDQPRATVKVFTAYTVPKYFDDRLTIGGGFRWQGTTYNMDWEGVMPDVKQDPYAVFDAMARYDVTDDVELQVNVSNLFDEKYYQTMGFYDSVVYGPGRGAQLRLSARF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN5</accession>
    <name>A0A2M9PDN5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LysR_substrate domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000360">
        <property type="protein sequence ID" value="PJN95649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="2">
        <location>
            <begin position="61"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="243" mass="26268" checksum="0957E04E8A1FD67E" modified="2018-04-25" version="1">MAGLSRGSCGPPGPARADGAGAGLHQVRPDPLDPPRHRGPGPRPGAEHAPGQAPRIPAGRGEGRIDLGFGRLKHNDPNVVSTVLREERLVAALPQGTVLAQDIAPLPLTALSGLKLIVYPKEPRPSYADQILTLLQDEDVRPSEVLEVREIQTALGLVAADSGVCIIPASARQMRSDVLYRLIDGPRALSPVILNHRIGDTSRYLVLIKRLIVDMYAENPAWFEANNVPFRNHDADKSKFIKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ6</accession>
    <name>A0A2M9PDQ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Post-segregation antitoxin CcdA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000346">
        <property type="protein sequence ID" value="PJN95685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009956">
        <property type="entry name" value="Post-segregation_anti-tox_CcdA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07362">
        <property type="entry name" value="CcdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8289" checksum="966E5D513E16BD35" modified="2018-04-25" version="1">MSVAPRRSTSLTLDRRLLDEAHALGLNVSRAAEQGVAQAIGAERARRWQAENAEAIAAYNRIVEAEGVPLAAFRKF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT4</accession>
    <name>A0A2M9PDT4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Plug domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06875</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000336">
        <property type="protein sequence ID" value="PJN95711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039426">
        <property type="entry name" value="BtuB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012910">
        <property type="entry name" value="Plug_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037066">
        <property type="entry name" value="Plug_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036942">
        <property type="entry name" value="TonB_rcpt_b-brl_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30069">
        <property type="entry name" value="PTHR30069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07715">
        <property type="entry name" value="Plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plug" evidence="4">
        <location>
            <begin position="83"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="243"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="441" mass="46437" checksum="47C6D7B366DA5C92" modified="2018-04-25" version="1">MVRSSAAVTPSSSGAWVPPRRRRPSHRRAWPGRRGSLAHAPDSARSIPALPAAHDRPAGRGPGLVLDPIVLTANRAPSAPALTGSSVSVLTGAEMETDGRPFVLQQIRDLPGVTVNQTGPAGAVSGFAIRGAPQAYVRVEVDGIEISDMTAPQVSPSLSGLLVDDASRVEVLKGSQSALYGGQAVGGVVSITSPRATGPGLQNSFLLEGGSFSTFRGAYTLTGMNDKGEFALSINRFQTDGFSSAEEADGNDEDDGYRTTRLSGSGRLHVTPQADVFAAGFWQKEDGDYDRNGGPVGDADNTFESTSWGLRGGTDFTTDTGLQNTLALSYYDRDGEQISAFGSYEPKGDRTKAEYRGAWTASEAVGFQFGADYTHEASESNFDPRTSSWIAGAWLQAAWTPTEAFAFNASGRVDGPIAPCRPPWPSCRRACSTSSSGRASD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ9</accession>
    <name>A0A2M9PDZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Calcium/sodium antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06500</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000308">
        <property type="protein sequence ID" value="PJN95780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1420.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004481">
        <property type="entry name" value="K/Na/Ca-exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004837">
        <property type="entry name" value="NaCa_Exmemb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044880">
        <property type="entry name" value="NCX_ion-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10846">
        <property type="entry name" value="PTHR10846"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01699">
        <property type="entry name" value="Na_Ca_ex"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00367">
        <property type="entry name" value="TIGR00367"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="104"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="209"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="243"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="277"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="305"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="6"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="Na_Ca_ex" evidence="6">
        <location>
            <begin position="176"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="332" mass="34286" checksum="79497896420E27F0" modified="2018-04-25" version="1">MSLLPYVAILAGLAALIWSADRFVLGAASLARRLGMPSLLIGMLVIGFGTSAPEMIVSAIASLQGNPGLALGNAYGSNIVNIALILGLTALISPILVHSSVVRRELPVLGAVTVLSVALLWDLELSRLDGIVLLAAFAGLVAWSIREARMSRGDALAVETEADMDIHPLSRNAAIGWTVGGLLVLIVSSRALVWGAVELARSFGVSDLVIGLTVVAVGTSLPELASSIAALRRKEHDIALGNVVGSNLFNTLAVVGLSGVIMPFAAPGEILTRDLPVMSALTFALVVMCYGFGRRGRVNRIEGGLLLAAFAIYTGHLVTGIGEDQPIAGTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED3</accession>
    <name>A0A2M9PED3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05740</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000264">
        <property type="protein sequence ID" value="PJN95899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017895">
        <property type="entry name" value="HTH_IS408/IS1162_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50532">
        <property type="entry name" value="HTH_IS408"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH IS408-type" evidence="1">
        <location>
            <begin position="4"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="121"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="30750" checksum="8DC7B45B0DBD6080" modified="2018-04-25" version="1" fragment="single">MRRIRDLLRLKLSQGLSDRAIAAVLSISKGSVGAYLSRARAAGLSWPLPPELDDDALELLLFPGQVGLNGVERPVPDWATIDRELRRKGVTRALVWEEYRAAHPDGYSYAWFCERYDAWKGRVRPTMRQTHVGGEKVFIDFSGDGIEVVDPLTGEVREAKLFVAAMGASSYTYAEARPAEALEDWIGAQVNLFAFLGGVPCMVVPDNPRAIVVARDRHEPGLNRTMAAMAEHYGVAVMPARPRRPRDKAKVEAAVLVAQRWIVGECQDVCVSGRPVRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF76</accession>
    <name>A0A2M9PF76_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04015</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000170">
        <property type="protein sequence ID" value="PJN96188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH crp-type" evidence="2">
        <location>
            <begin position="123"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="24212" checksum="1F33425E86FDEA3D" modified="2018-04-25" version="1">MRRFKAGELTVAPRTTILLQGAASPQIFTTLSGWGVRYKILPDGERQVIGFVLPGDLIGLQAGLLGEMKHSVDSVTDMTLCVFSRADLWSLFKTCPERGYDLTWLAAREEHFLGDMLATIGQRSGVERVAWGLLSLYRRAEARRLLRPDGAMPMPFRQQDLANAFGLSLVHTNKTLHVLRARGLIELSDGMLRLIDRKTLEDVSNMEAPIEAPRPLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB2</accession>
    <name>A0A2M9PFB2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000161">
        <property type="protein sequence ID" value="PJN96228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="13"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="17216" checksum="078B794040C23533" modified="2018-04-25" version="1">MSKTTTGTTEMPISAEQLRMQILEKELEKAAQAEKAAAAEHAKLAAFTQDFLTSHVSEEETAMVRRLVFNAVKDGKMEALVYSFPSLLCTDQGRAINSNAPDWPRTLQGKAKEFYERFETLAKPQGYRLKAMIINFPGGVPGDVGFFLNWAPQEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL5</accession>
    <name>A0A2M9PFL5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03120</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000125">
        <property type="protein sequence ID" value="PJN96343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="194"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="18"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="230" mass="25161" checksum="31DC481B2B3969F3" modified="2018-04-25" version="1">MSFVTIITEYWRDFLEGTLLTVQLVAIAAVLGVLLAIPVALGRLSDNRAVRAGATAYSIFFRGTPLLVQFFLVYYGLGQFGFVRDSLLWPFLREAYVCALLTLTLNTAAYSGEVVRGGILSVPPGEIEAAKACGMSWATTLRLVTLPRAFSIALPAYSNEVIILLKGTSLASTITLLELTGMAQLAASDTYQPIQVFLLAGVIYYALTLIITRIFAVLEARFTRYMRLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM0</accession>
    <name>A0A2M9PFM0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">OMP_b-brl domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000149">
        <property type="protein sequence ID" value="PJN96264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027385">
        <property type="entry name" value="OMP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13505">
        <property type="entry name" value="OMP_b-brl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMP_b-brl" evidence="1">
        <location>
            <begin position="5"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="20078" checksum="32A5B4DF231C28E0" modified="2018-04-25" version="1">MSTVYMKGFGGATWPSSDDENLRRKGSTVGRVDIDYDTGYTLGLAAGFSPMPSVGLEFEYAYRNVDYDTSGRLDDDNFKGNGTAKSNSLMVNAIYNFTGLANPQVVPYVGAGIGAAQLDYEGDSSTWNFAYQAMAGVGYEVAPQWTIYGEGRWFGTSDTKVWPGDGVATDLSFGTFDLLIGAKYAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS1</accession>
    <name>A0A2M9PFS1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000109">
        <property type="protein sequence ID" value="PJN96395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009841">
        <property type="entry name" value="VirC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038473">
        <property type="entry name" value="VirC2_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07181">
        <property type="entry name" value="VirC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="235" mass="25110" checksum="0E9579A6F354121B" modified="2018-04-25" version="1">MKRELRLPSKGYDLLRQQVQARRGSATNRDSEKDAERSGAPAGASGEPAPDPAEQQPAAEPVAQGSVAERAASGDPQAAPEIAGEAQEGLTVTTAAGGKVKQRSPKPEKLPSPPVARPADGERITLKVNVRAPAPGLFPFYDRVIETMPPRRALPLLLAKAFEDLEAAVAGGARLELKDYASDEDAARISTSRTMDHALFQKMRAQIDPYELMRKTSIGTALATSALCLYLTKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY5</accession>
    <name>A0A2M9PFY5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000090">
        <property type="protein sequence ID" value="PJN96465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="97"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="276" mass="29907" checksum="65E8B87D35389B64" modified="2018-04-25" version="1">MAEGRLLLPPQAARRHRTAGVQCQRRRGDRRVAGSLLGLLHSRQGRLQLCHPRRGQVREGRYGRGLRRVGPAGVAGRDWPWGLRSRGAGEAGGDRGGGEGGSRETRHVPRVRPDDHRRAPGPVSGGRGDGFTRNRRSYRSPLVHPPAGGPQMTDAPKLLPCPLCGGPSEVWQAHDKRPAWIACMDRCCVLVTKEHTTTEGAISAWNIRADLVPQPQEPTDAEVEAAAALVWEMGEFAGLHWREAQKLAPGGQIGSEAAKARRIARAALLAARKARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ1</accession>
    <name>A0A2M9PFZ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000109">
        <property type="protein sequence ID" value="PJN96394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="21211" checksum="7FA214A98FBA7341" modified="2018-04-25" version="1">MTVRNNTVTLNPDQGVTQIPLVNVSGLSRNVEIIGNTVSSVQDSLGDTWTVYGNEVEARSRFHFDGLYVNGVLQSPVRPTAQDSSLSDHFVIDRSAFDGTTPLVVLDIDFAEGDRLQLTGFNAGTFIRPAWDKTFEIWNNGGAAEINSFSDLDKVEDSVPVSASVTSGGDALIAINQGSAGTFYLLLDNIVGMPDGII</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG97</accession>
    <name>A0A2M9PG97_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01925</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000070">
        <property type="protein sequence ID" value="PJN96542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="124"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="173"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="259"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="304"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="36030" checksum="F0D31A59C5031CF1" modified="2018-04-25" version="1">MPDAAARPLWPRLKRRPETWLLLVILLVGTVFSIAAPGFLTLPNVIDLLETYSVQAIMAMGLFVVLVSGGIDISFAATASVAQYCAALAASRLGLPAPAVLAIGFSVGIALGCLNAALIHHLRITSIIATISMMSISFSLLMYFSAGRSIYDLPDWWTGRVVFYRAELASGDIVRLTLPIVAMFAAALVTWALMTRSSIGRQIYAMGGNPEAARRIGIDIGKLTFFAYGYLGFLAALAGMIQAHRVGESVPNAMFNTELAVLSAAVLGGASLTGGVGTVPGVLLGIVLLAILQNGLNLLGVSSYFFQIVIGVTILVSTSITVISSRRGRRHRILDEAPAHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD7</accession>
    <name>A0A2M9PGD7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01980</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000072">
        <property type="protein sequence ID" value="PJN96534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="528" mass="59497" checksum="60C68F1087DBBAC6" modified="2018-04-25" version="1">MAELTQTLLAPFESFMAKFDKLAKESKHNASPSRAIVQALLTGGEAVSQCTVAEIARRCYVQQSGKTKAVAWLSSKGHLAFFPRLEFGEQLPYLTGPLTTAQFDEHMHDLFDEFAMLTVPEDKTKEQRKARAAARSQVAKDTYGSLDDRLYLLLGRERPAMAGRLLIDIWEETDMVHFPEDNLVEVCRRFKGYRNPRVEEALAIRVGHDFFIGDDAANPRMPGGYKFLDLVVAARVSPTRRKATLWLQAPTGWGKSFLARAIECHGIVYTLVEDEIVAAFASSTSGLSVDKLANAHILHIDEITKVYKEFKLINEEIDVTPKFGFKTTVPVYLKLFTSAETIPALTKTGGVEDQFADRMSHMTPEDNKLNSRPLFQQLGAGKYYKGLIYFVGRYMAWRLSQYKDAGREVAEQQAGQFLEEFHREYALSNTHGKLSDSFPALAADARRWLLTPGNVPEGDVFRKGDNVYVRDARKHCERWMAGWTTTNPTREMLLGKNFDAVLRLVPVEGAIDNQRWLDGANVRSARLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH2</accession>
    <name>A0A2M9PGH2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000043">
        <property type="protein sequence ID" value="PJN96653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006944">
        <property type="entry name" value="Phage/GTA_portal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006427">
        <property type="entry name" value="Portal_HK97"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04860">
        <property type="entry name" value="Phage_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01537">
        <property type="entry name" value="portal_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="407" mass="45208" checksum="972A95AFEEEC7548" modified="2018-04-25" version="1">MSLPQRLKQAVRVALGLTDVEGWRTHYPMATAAGKVVTPESALQIAAVWACVRLLSETVGTLPMMLYRTAADGGRTLATDDPLYELLHHAPNSDMTAVEFWEGVTLGLCLAGNSYARKHRMGRRLVALEPLPFDRLQVRRQSNGAREYVHSSPKGRKVYSEDDIFHVRGFGPAGDQGLSPISFARQTLGTSMAADELAGSIFAEGARFSGIITSDQVLDAEQRTQVRENLLEPFMGQKGAGGMMVLEAGFKFQPVSMTPEDSQFLETRSFQVEEVCRWFRVPPFMVGHTEKSTSWGSGIEQQLIGFLTFSLRPYLSRIEQSVRRSLIPAERRDSLKPEFKVEGLLRTDSAARSRFYAVMVMNGIMTRNEVRRLENLPPVEGGDELTVQAQNVPLGAQWGDDTKEPVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI2</accession>
    <name>A0A2M9PGI2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01405</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000048">
        <property type="protein sequence ID" value="PJN96632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="259" mass="28179" checksum="17C92DA9FC27CC2F" modified="2018-04-25" version="1">MTDLILTGRNLVKRYGRVTALDNADFDLRRGEILAVIGDNGAGKSTMVKAVSGAVVPDSGEITLDGKTIHFASPMQARQAGIETVYQNLALSPALSIADNMFMGREIRREGFMGQWMRMLDRPKMEAFAREKLSELGLLTIQNINQAVETLSGGQRQGVAVARAAAFGSKVVILDEPTAALGVKESRKVLELIQDVRGRGQSIVLISHNMPHVFEIADRIHVHRLGRRLCIINPKDYTMSDAVAFMTGAKQPPAEALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI7</accession>
    <name>A0A2M9PGI7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01245</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000042">
        <property type="protein sequence ID" value="PJN96659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="242"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="289"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="345"/>
            <end position="365"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="395" mass="41539" checksum="FF6F4E1A3E563BE8" modified="2018-04-25" version="1">MASVSENQGAGLGGYLKSNLREYGILVALVAIMAFFQVMTDGTLMRPVNLTNLILQNSYIIIMALGMLLVIVIGHIDLSVGSVAGFVGALAAVMLVHWGLPTIVVVPLCLAAGVAIGAAQGYWIAYWRIPSFIVTLAGMLVFRGLTLWLLAGASVGPFPKSFQLLSTGFVPDLFGADKPNVTALLLGCLAAGVIVWLAVRTRARHMRYGIEEEPFVIFAARNALVAGALVYLSWLLATYRGLPNVLVTMAVLVAAYAFLTTSTTLGRRIYATGGNEKAAKLSGIRTERLTFLTFCNMGLLAALAGLIFAARLNTATPKAGVGFELDVIAAVFIGGASMSGGSGKIVGAVIGAFIMGVMNNGMSILGIGIDYQQVIKGLVLLAAVIFDVYNKQKKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK4</accession>
    <name>A0A2M9PGK4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000040">
        <property type="protein sequence ID" value="PJN96668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011459">
        <property type="entry name" value="DUF1565"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07602">
        <property type="entry name" value="DUF1565"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1565" evidence="1">
        <location>
            <begin position="69"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="145"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24917" checksum="78A4C5E5E5C4CD3D" modified="2018-04-25" version="1">MFAQDWTIQDQDDSSFVLERCAGINDFLANMTDQFDFTPSAAVVETAPLQDARLAAATFAVADLYVSATGRDSNPGTYDKPLATITRAVALSDPGDVVSVRGGTYNAIANIWKGGTKDNPLTIQAQAGETVILDGRGLASNKDLVSITASYVTFEGFEVRNATRSGISVYAAHDVTISNNEVENSKRNGIWIGGWKEGQSYNQVVENNVVHDNVLENSAKNGRRLGARDRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN4</accession>
    <name>A0A2M9PGN4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Histidine triad nucleotide-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.428.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019808">
        <property type="entry name" value="Histidine_triad_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001310">
        <property type="entry name" value="Histidine_triad_HIT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011146">
        <property type="entry name" value="HIT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036265">
        <property type="entry name" value="HIT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23089">
        <property type="entry name" value="PTHR23089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01230">
        <property type="entry name" value="HIT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00332">
        <property type="entry name" value="HISTRIAD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54197">
        <property type="entry name" value="SSF54197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00892">
        <property type="entry name" value="HIT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51084">
        <property type="entry name" value="HIT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HIT" evidence="2">
        <location>
            <begin position="10"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Histidine triad motif" evidence="1">
        <location>
            <begin position="108"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13898" checksum="3E709C98B72E081D" modified="2018-04-25" version="1">MAYDYDEQNIFAKILRGEIPNKTVAETEHSLAFHDIRPQAPIHVLVIPKGAYVNFDHFASEASDAEILDFNRLTGRLCAELGAAPDAGGRGYRLISNCHEAGVQEVPHLHVHILGGRVLGRMLERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP4</accession>
    <name>A0A2M9PGP4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Phosphate transport system permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">pstC</name>
        <name evidence="12" type="ORF">CNY89_00855</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 10">Cell inner membrane</location>
            <topology evidence="2 10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000028">
        <property type="protein sequence ID" value="PJN96725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011864">
        <property type="entry name" value="Phosphate_PstC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02138">
        <property type="entry name" value="phosphate_pstC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="32"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="61"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="105"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="146"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="191"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="259"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="62"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="31286" checksum="9F561C745562A4B2" modified="2018-04-25" version="1">MVLGLLVSASLIAIFTTVAIILSLVFETARFFSQYTWTEFFFGVVWSPAFQGNSQLGMLPLLWGTLYVSFIALLVAVPIGLFTAIYLTQYATTRVRRVIKPVIEVLAGIPTIVYGLFALITVGPFLRDYFAQPTGLGNSSASVMTAGLVMGIMLIPFVSSLSDDIINAVPRAMRDGSLALGSTQSETIRRVIIPAALPGIVGAILLAASRAVGETMIVVLGAGAAARMSLNPFEAMTTVTVKIVSQLTGDTDFSSPETLVAFALGITLFTMTLCMNVVALYIVRRYREQYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ9</accession>
    <name>A0A2M9PGQ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00780</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000024">
        <property type="protein sequence ID" value="PJN96739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="52"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="78"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="216"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="337" mass="36257" checksum="9AB50057A9EC3691" modified="2018-04-25" version="1">MTDALNALVLLTNFVLIPAAAYGAQLALGALGVTLIYAVLRFSNFAHGDTMAFGTAVTILVTWGLQSAGIGLGPLPTALIALPVGILAAVVLALGTDRLVYRFYRKQKSPGVVFVMASVGVMYVYNALTHFLIGPEDRRFEDGERFVIRVNDFKAMTGLDQGLALRTSQLITIVVMVAVTAAVFWFLQRTRTGKAMRAFSDNEDLALLSGINPDRIVAITWILAASLATIAGVLYGLDKSFRPFTYFQLLLPIFAAAIVGGIGQPFGAIAGGFIIAFSEVTLTYAYRQFAGYILPEGWAPDGMLQLLGTDYKFAVSFIILVVVLLIRPTGIFKGKVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT2</accession>
    <name>A0A2M9PGT2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00750</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000023">
        <property type="protein sequence ID" value="PJN96743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="125"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="25854" checksum="E270639461ED7A60" modified="2018-04-25" version="1">MAAIRVAWSEASFFRTVAAWASTSICWTRPSVSTASAAARASPASGSAFLKASDAAISRLAGSGSISVSRDRAERMTRRTELLTLIASVERAATGPRSAPVSGSDPTALEPRPVTRMIAPSSLRWCNSPAPSASSSPAARGSPVAAMAATTSERSLKLPSGSCVARPSRVWDRAGVTQRASQRQMETRIRMDRPLNMERRAGRGPARRISGQLVAPPHWPVAVLKLPHCIGSRQTPTRSLDSGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT6</accession>
    <name>A0A2M9PGT6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00815</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000026">
        <property type="protein sequence ID" value="PJN96732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="3">
        <location>
            <begin position="46"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="2">
        <location>
            <begin position="222"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="402" mass="43337" checksum="2ECEAEA3222B6537" modified="2018-04-25" version="1">MRAQPPKETRSMQPEHPLAPTPAEEATARRDGRPTVMFLLSHSGNGGAQELWMNLAEAFRARGCRVQLAALYKPDDEEAMPSIGSLDWLYVSARRTSAARMLPLLMRFLRLHDPDFVFTALPAAGVLTPLAVLASGVRARVVVSHHTPVDTYAPMLNRLDALTGRLSKVAAVVSVSKAVSDSLERRPAGYRAKTSVIRNSLPPALERHLAELTAKRGARPAGRKLMAIGRLAQQKNYPVLLRAMARVEDARLTIVGAGPDEQALKGLAQDLGVTDRVRFAGQMSRLDALEMLADSDVFLQPSLFEGHSLALIEASTLGVPLIVSRVPAQVEGVTTSDGAVCGVIVEPQDDAALAAEIRRMLDDDDHRAEWTRRSAALGASTTFARTVTAYEALLGKLTPAPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU8</accession>
    <name>A0A2M9PGU8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycogen debranching enzyme</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000017">
        <property type="protein sequence ID" value="PJN96778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004193">
        <property type="entry name" value="Glyco_hydro_13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02922">
        <property type="entry name" value="CBM_48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CBM_48" evidence="1">
        <location>
            <begin position="5"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6569" checksum="D88E18F7C35CD127" modified="2018-04-25" version="1" fragment="single">MTPSLGATPGPDGTRFKVRAAAERLTLCLFDGETETQIPMQGAGGLFTAFVPSLAPGARYGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV2</accession>
    <name>A0A2M9PGV2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00675</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000020">
        <property type="protein sequence ID" value="PJN96760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="24"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="97"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="221"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="258"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="290"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="325" mass="34785" checksum="B9CA984A562FC83A" modified="2018-04-25" version="1">MTDQTIGLETPPESPTLGMPRHHLAIFAGLLVFLLAAPFFLYPVFLMKVLCFALFACAFNLLLGYGGLLSFGHAAFFGSASYVSAHAAKVWGLTPELAILSGTLTAALLGLVIGALAIRRQGIYFAMVTLAFAQMVYFFCVQAPFTGGEDGIQAVPRGKLFGVFDIAGDRAFYFFVAAIVVAGFLAIYRIIHSPFGHILEAIRENEPRSISLGYHVNRYKLAVFVMSATLAGAAGATKALVFQLASLTDVYWTMSGEVVLMALLGGVGTVFGPIVGATIVVALQNYFASFGAWVTVIQGVVFVLSVLLFREGIMGVLARLTRRSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW7</accession>
    <name>A0A2M9PGW7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">30S ribosomal protein S11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00530</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01310">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001971">
        <property type="entry name" value="Ribosomal_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036967">
        <property type="entry name" value="Ribosomal_S11_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11759">
        <property type="entry name" value="PTHR11759"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00411">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002131">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10755" checksum="E030D0952B634917" modified="2018-04-25" version="1" fragment="single">MAREKARVKRKERKNISTGVCHVNASFNNTKILIADAQGNAIAWSSAGAMGFKGSRKSTPYAAQMAAEDAGKKAQEHGVRTLEVEVQGPGSGRESALRALGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY7</accession>
    <name>A0A2M9PGY7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_00330</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000009">
        <property type="protein sequence ID" value="PJN96818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="321"/>
            <end position="491"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="491" mass="54753" checksum="0AAF3C48AAF4CE18" modified="2018-04-25" version="1">MTLRPWRWLLGLLIAALALGAFAWFVLLRPAPLRLANDPSVQFNHGSIGNEAAQGVPYWIWRVLPKIFADKLPGDGGGYAAFGMFWEPGAPLPVGFSEMRLGAIGRVTPNCAFCHQGSYRLSPQDPPRLVSAGPGTRVDPQAYIRFLAATGQDPRFTADRILEEIGWIYDMPLWERMTYRFLLVPATRKALRTQASRFAWTETRPDWGPGRIDPFNPVKFQNLGLPDDGTIGNSDMMPLWTMAATDATPLSRKALHWDGLLTDLHETVVAGAIGDGMDHKSWPRTQASLAAMEDFIRHQAPPPSPFSADLPEGDPYRVDAQAVARGQAIYAGTCAVCHAATGLRNRSVIPVAELGTDRHRIDMWTEAARDRYMAYSPDYDWGFRYFQKTEGYVALPHDGLWLRGPYLHNGSVPNLRAMLTRPEDRPAVFWRGSDLVDPVNGGFVSTETGDRMRRPWRYDTTLPGNSNAGHRWGTDLPPEDKDALLAYLKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH45</accession>
    <name>A0A2M9PH45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="7051" checksum="1BB16B1E3818B447" modified="2018-04-25" version="1">MIADRATARELLTRKLAKIDREMGSAARRSDKDNTARLGGLYEMFRDELRALDWAQRRARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P451</accession>
    <name>A0A2M9P451_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004877">
        <property type="protein sequence ID" value="PJN92331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7736" checksum="E981C29560372B85" modified="2018-04-25" version="1" fragment="single">RCSHDDYSSVMRLAIDTSRYAMQLARYHKLAGPEGLLLLNFDELRSDPQALLQRSARFLGLDDFTFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E9</accession>
    <name>A0A2M9P4E9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004669">
        <property type="protein sequence ID" value="PJN92399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7494" checksum="6699403028F4096F" modified="2018-04-25" version="1" fragment="single">LGDKPLPEDRIGARHRQHRLRRALDEDRRLARGSPSAAASAISPSQRTGSAPDIASTASGAPLTKIAASPEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K4</accession>
    <name>A0A2M9P4K4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydroxymethylglutaryl-CoA lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004464">
        <property type="protein sequence ID" value="PJN92460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="29" mass="3159" checksum="C1D4DFBA4A540FE9" modified="2018-04-25" version="1" fragment="single">MSEVTIYEVGPRDGLQNEARAIPTAQKIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P8</accession>
    <name>A0A2M9P4P8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004348">
        <property type="protein sequence ID" value="PJN92495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8136" checksum="CF0FF3F53765581E" modified="2018-04-25" version="1" fragment="single">VASFGGPVGVKILSKEILHKSEVGGVAPEEVEACCTQRLARALDGRLVASFGGPVGVKILSKEILHKSEVGGVAPEEVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R3</accession>
    <name>A0A2M9P4R3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Lipopolysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_25900</name>
        <name evidence="8" type="ORF">CNY89_28875</name>
    </gene>
    <organism evidence="8 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004220">
        <property type="protein sequence ID" value="PJN92532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003257">
        <property type="protein sequence ID" value="PJN92855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009103">
        <property type="term" value="P:lipopolysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003856">
        <property type="entry name" value="LPS_length_determ_N_term"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02706">
        <property type="entry name" value="Wzz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="17"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Wzz" evidence="7">
        <location>
            <begin position="3"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN92532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN92855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8855" checksum="4A8520503FA01048" modified="2018-04-25" version="1" fragment="single">MPNIDLKFYLAVFLRRLPYFLVIAALVAAVGITLAAILPPNYRSAASILVEPQQIPGDLATATVGVDPYEQAQIIEQRIMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P570</accession>
    <name>A0A2M9P570_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003829">
        <property type="protein sequence ID" value="PJN92665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="11127" checksum="E805EEBDA98E5BCE" modified="2018-04-25" version="1" fragment="single">RRARRILPALFFVMLTCVPFAWVWMTPSQFKDFSEAIVAVTLFSSNILFWLQTDYFAPLAELNPLLHTWSLAVEEQFYVFFPLLMIFLWRFGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P593</accession>
    <name>A0A2M9P593_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003727">
        <property type="protein sequence ID" value="PJN92699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008930">
        <property type="entry name" value="Terpenoid_cyclase/PrenylTrfase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48239">
        <property type="entry name" value="SSF48239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10138" checksum="4ED85DBAD0C9549E" modified="2018-04-25" version="1" fragment="single">MPDRPFEAALNNLSNRVAAYGDFEKGGEDRRRGFGLWGPQDGDAWLDAYVTDFLGRARGLGRTVPDRPFEAALNNLSNRVAAYGDFEKGGED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P597</accession>
    <name>A0A2M9P597_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PseudoU_synth_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27455</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003736">
        <property type="protein sequence ID" value="PJN92693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140098">
        <property type="term" value="F:catalytic activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009982">
        <property type="term" value="F:pseudouridine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034470">
        <property type="term" value="P:ncRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001522">
        <property type="term" value="P:pseudouridine synthesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020103">
        <property type="entry name" value="PsdUridine_synth_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006145">
        <property type="entry name" value="PsdUridine_synth_RsuA/RluA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00849">
        <property type="entry name" value="PseudoU_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55120">
        <property type="entry name" value="SSF55120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PseudoU_synth_2" evidence="2">
        <location>
            <begin position="4"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7734" checksum="41FDB4D20B4C8FA0" modified="2018-04-25" version="1" fragment="single">VPDGGRMAVTRARVLERMGEAPHFRAALVECRLETGRTHQIRVHLASPPASAAAPPTARRWPWSPTAAGWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A5</accession>
    <name>A0A2M9P5A5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27355</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003703">
        <property type="protein sequence ID" value="PJN92709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8426" checksum="354869B36BEE2890" modified="2018-04-25" version="1" fragment="single">MGFSNVFLYFILTDFLSTICSRLFIAFMTALAISTSSLLTMAIQIFLMLYAFVFRRLTYKWPIFLFAMLIATG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E5</accession>
    <name>A0A2M9P5E5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003512">
        <property type="protein sequence ID" value="PJN92774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11782" checksum="E789A9EE646DAC26" modified="2018-04-25" version="1" fragment="single">DKVDAGTLANLYAAGYLPEIWTPDAATERLRRLVARRYQIVRHRTRVKNEVYSILAAHLVPKCPHADLVNQRGRAWLARQVVPDDERAAIERNIRELDRLTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F2</accession>
    <name>A0A2M9P5F2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26660</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003491">
        <property type="protein sequence ID" value="PJN92781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11374" checksum="A0E132228FBC3B5C" modified="2018-04-25" version="1" fragment="single">GLRGVKLVISDAHEGLKAAISRTLSATWQRCRVHFMRNALAHAGKSGRRVVSAFVATAFAQDDADSARQQWRRVADQLRPKVPKLAALMDEAEPDVLAYMTFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J3</accession>
    <name>A0A2M9P5J3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003359">
        <property type="protein sequence ID" value="PJN92824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7238" checksum="526CF7E0200514A1" modified="2018-04-25" version="1" fragment="single">MASWDIISATLDRQDAFTGRTQIWSTILAYLRDHWPAGAGYGSFWNVGPDSPVFAYARSGAWVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K3</accession>
    <name>A0A2M9P5K3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003431">
        <property type="protein sequence ID" value="PJN92800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11271" checksum="3D52B8C42774D81E" modified="2018-04-25" version="1">MFAPHLIVIGNDLESNDPSAEPIDKAINDEFRNLMDGREKRGQGIFSYEELADASSFISRAQSAPWRRYPDVPDYRGARTMLCGGKLRIRREPPDPHHC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P662</accession>
    <name>A0A2M9P662_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TraG-D_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002848">
        <property type="protein sequence ID" value="PJN93017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032689">
        <property type="entry name" value="TraG-D_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12696">
        <property type="entry name" value="TraG-D_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TraG-D_C" evidence="1">
        <location>
            <begin position="3"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13709" checksum="5F2C3BB99831071F" modified="2018-04-25" version="1" fragment="single">MPLGRSYGLHAWPFCQNWAQLVDIYGESGAESFLASCDAFCVYGLDDPRTPQLVSDFIGRITPSELGGFQTVKYGDRVAFATARHSATVSCTRRALAAGREASAVGQTGSLDHVRGELAQLKQGLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B3</accession>
    <name>A0A2M9P6B3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002734">
        <property type="protein sequence ID" value="PJN93059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="2">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10418" checksum="1D2D13054446263E" modified="2018-04-25" version="1" fragment="single">MTVATRSTCGHHQRAATRHGSPTKWLNQFSDNFFDMIIIDEAHHSAAASWQRVIERFNQAKVILLTATPFRSDRQELDGELVFRYPFRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H4</accession>
    <name>A0A2M9P6H4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01600</name>
        <name evidence="2" type="ORF">CNY89_23090</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002445">
        <property type="protein sequence ID" value="PJN93164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000058">
        <property type="protein sequence ID" value="PJN96594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13586">
        <property type="entry name" value="DDE_Tnp_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="6194" checksum="71783FCF3064861D" modified="2018-04-25" version="1" fragment="single">RWVVERTFAWLGRCRRLAKDWEKSIASAEAWINVAQIRLTTRRLARFWYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J7</accession>
    <name>A0A2M9P6J7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002375">
        <property type="protein sequence ID" value="PJN93194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11283" checksum="9B953834E73E7CE3" modified="2018-04-25" version="1" fragment="single">MSQDAQTSLAVLLLDIKDEIDAAKAERRHVLDALQRTRISELDRAFASLSKAEDFERDSRLHYRQRLTEFGRWRRRTLWLAGTGAALGALLGAFLLVWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P710</accession>
    <name>A0A2M9P710_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002111">
        <property type="protein sequence ID" value="PJN93317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045767">
        <property type="entry name" value="DUF6134"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19630">
        <property type="entry name" value="DUF6134"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17623" checksum="7F9B6CED4F6F5449" modified="2018-04-25" version="1" fragment="single">EAAAPPPAGRLAFDVTRKGADIGDHVFTFSGGGGDFDVKVATDIAVRVPLIRAKVYSYEQQSSEKWRGGQLVHLASKTDNDGKADQVDEPVDRLLPGSLWSADSVQATRLVNTITGKTMRIQVTDLGTEKIEAGGRGVAAHHYRIAGDLDREVWYDAQGYLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P714</accession>
    <name>A0A2M9P714_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002157">
        <property type="protein sequence ID" value="PJN93295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008719">
        <property type="entry name" value="N2O_reductase_NosL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41247">
        <property type="entry name" value="PTHR41247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05573">
        <property type="entry name" value="NosL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14004" checksum="A02FAB47C52E51A5" modified="2018-04-25" version="1" fragment="single">MPMKSICGRPRVGRGGSRRRPVWFSSARDTVAFTLLPEEPKDIAAIYVSDMGAAPSWEDPGATNWTDAKTASYVIGSDAEGGMGGAEAVPFADRAKAEGFAKEHGGEVVAFSAIPADYILGAHDGATDTGTADPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P729</accession>
    <name>A0A2M9P729_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GreA_GreB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21565</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002066">
        <property type="protein sequence ID" value="PJN93343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GreA_GreB" evidence="2">
        <location>
            <begin position="55"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="139"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="151"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18551" checksum="5D734604300119D2" modified="2018-04-25" version="1" fragment="single">RLCLMPTIWAGSTFSRPSRFTARRGYRPSWARGAACGDRTIARDASRRGQYRLGVSYRDEITGRVHSVRLAMPQDADIRIRRVSVLTPVGTALIGRAEGAVIDCEFPAGTLRRLAILRISKNGPKPESAGIFRRESVRRMGDATSEANRPPHVASERRDLERMSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P783</accession>
    <name>A0A2M9P783_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aspartate aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17040</name>
        <name evidence="1" type="ORF">CNY89_21325</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002023">
        <property type="protein sequence ID" value="PJN93370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001272">
        <property type="protein sequence ID" value="PJN94007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7500" checksum="D2425E82DD8751B1" modified="2018-04-25" version="1" fragment="single">MQFPERFESQPEYAFPRLRRLLAGITPGGPETPMSIGEPRHPLPAFVPEIIAAHAAAFGRYPPNEGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A2</accession>
    <name>A0A2M9P7A2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Acetyl-CoA carboxylase carboxyl transferase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_20850</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001913">
        <property type="protein sequence ID" value="PJN93431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041010">
        <property type="entry name" value="Znf-ACC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17848">
        <property type="entry name" value="zf-ACC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <keyword evidence="3" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="zf-ACC" evidence="5">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF17848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="31" mass="3655" checksum="D63A3E1B70A16FD9" modified="2018-04-25" version="1" fragment="single">MFSRREVPENLWVKCDSCGAMLFHRELEASL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B0</accession>
    <name>A0A2M9P7B0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sterol carrier family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001964">
        <property type="protein sequence ID" value="PJN93400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003033">
        <property type="entry name" value="SCP2_sterol-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036527">
        <property type="entry name" value="SCP2_sterol-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02036">
        <property type="entry name" value="SCP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55718">
        <property type="entry name" value="SSF55718"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP2" evidence="1">
        <location>
            <begin position="30"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10485" checksum="9F4E4187278C64B6" modified="2018-04-25" version="1">MRTGSCPPDIVNGAVKALAAKLGDERIDGSVKFVIEDEGAVRIDETGVSADDSEADCVLTADAETFRALLDGEIAPTGAFMSGRLRVDGSMGLAMKLGALLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E5</accession>
    <name>A0A2M9P7E5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20660</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001870">
        <property type="protein sequence ID" value="PJN93457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="2"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7971" checksum="0E2BB4F8FFA2C604" modified="2018-04-25" version="1" fragment="single">FSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSAPPPVATVAPRRNSQHAIPVADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H8</accession>
    <name>A0A2M9P7H8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20585</name>
        <name evidence="2" type="ORF">CNY89_20645</name>
        <name evidence="1" type="ORF">CNY89_28515</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004093">
        <property type="protein sequence ID" value="PJN92576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001867">
        <property type="protein sequence ID" value="PJN93460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001856">
        <property type="protein sequence ID" value="PJN93470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6820" checksum="9559F2D2F1119311" modified="2018-04-25" version="1">MLAAGWRQACVPEGWTDDQVLEFASDTRPREDGSRGGTVARMSQHCKCAAEKVSCAKSLGYVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N9</accession>
    <name>A0A2M9P7N9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001728">
        <property type="protein sequence ID" value="PJN93557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="21963" checksum="DFA40FD51950DCEE" modified="2018-04-25" version="1" fragment="single">MPGFYQPSENEFDPSTDDFVLPAIAKERKYKHFDLPLVARELTFDFSREDERHRFLPLLGFTDLARRYVRVRDGNGHWKRNGDDSFVREKKPKLRPIRFAGHEDAAYLQAYAGHLNGFYEQALARDGTSGVVLAYRRGGGTNIHHAKALFDEIRSRGDCTVIAMDISGFFDCLDHMLLRNEVAGLLGVTRLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P0</accession>
    <name>A0A2M9P7P0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Arsenical-resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_19065</name>
        <name evidence="5" type="ORF">CNY89_19830</name>
        <name evidence="4" type="ORF">CNY89_23885</name>
    </gene>
    <organism evidence="5 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002658">
        <property type="protein sequence ID" value="PJN93084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001703">
        <property type="protein sequence ID" value="PJN93574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001555">
        <property type="protein sequence ID" value="PJN93690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015103">
        <property type="term" value="F:inorganic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004706">
        <property type="entry name" value="Arsenical-R_Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43057">
        <property type="entry name" value="PTHR43057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="35"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="64"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12509" checksum="7D7B12D39F117A76" modified="2018-04-25" version="1" fragment="single">MPHRLVGLCIVVGVALGHVLPGVFQAIGAVEYANVNIPMAALIWLMIIPMLVRIDFASLGKVGAYWRGIGVTLFVNWAVKPFSMALLGWLFIGYLFRPWLPADQIDSYIAGLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q7</accession>
    <name>A0A2M9P7Q7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase M4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001743">
        <property type="protein sequence ID" value="PJN93548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="22351" checksum="BE533E61EE1F3A2D" modified="2018-04-25" version="1" fragment="single">PPTREPGEGEAYDISGRLPLAYATRPYERSGEEPLYRRLPVFTLDASARQAEGRIVDLKIPYEPLRRGLRGRILEVEAEVPGEAALRRADLDDPHVLIAGGYPPSISDPRFHEQMVYAVAMQTYGQFQTALGRQPAWAFDRRDEENGLNRLRLRPFGAPGEAQAWYDHDAGEVVFGHFRPTKATPSVPNREGSHVYLSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R8</accession>
    <name>A0A2M9P7R8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19935</name>
        <name evidence="1" type="ORF">CNY89_22120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002212">
        <property type="protein sequence ID" value="PJN93275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001727">
        <property type="protein sequence ID" value="PJN93558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13788" checksum="6F197C9A00935EC1" modified="2018-04-25" version="1" fragment="single">MVLAQARAPFTARIGEILRGERATLGRSLLDVQRELKIRAIYIDAIENADPSVFPNKSFIPGYVRSYARYLGLDPEQVTAQFRAETGIEEGGKNGLEGRVRLEGEGGAVEFGPGEAFVVEGGFAGTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P821</accession>
    <name>A0A2M9P821_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001600">
        <property type="protein sequence ID" value="PJN93650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9557" checksum="715E9DE612B477A7" modified="2018-04-25" version="1" fragment="single">MNAPIQQIQHVDVAGTGFTVLDRIYADGSLTDESLGGSCGNVLLSLAMLNRQVAPVLLLGDDVEGERLLCEFISAGALTNYIHLRTDLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P824</accession>
    <name>A0A2M9P824_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA mismatch repair protein MutS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001554">
        <property type="protein sequence ID" value="PJN93692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030983">
        <property type="term" value="F:mismatched DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007695">
        <property type="entry name" value="DNA_mismatch_repair_MutS-lik_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016151">
        <property type="entry name" value="DNA_mismatch_repair_MutS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036678">
        <property type="entry name" value="MutS_con_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045076">
        <property type="entry name" value="MutS_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11361">
        <property type="entry name" value="PTHR11361"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01624">
        <property type="entry name" value="MutS_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53150">
        <property type="entry name" value="SSF53150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55271">
        <property type="entry name" value="SSF55271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MutS_I" evidence="2">
        <location>
            <begin position="1"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="18109" checksum="5E5AE310E74F9EB8" modified="2018-04-25" version="1" fragment="single">MMAQYLEIKAAHPDALLFYRMGDFYEMFFTDAEAAAAALDIALTRRGQHLGQDIPMCGVPVHAAEGYLLTLIRKGFRVAVCEQMEDPAEARKRGAKSVVRREVIRLVTPGTLTEDSLLEARRHNYLVSYTEVRGEGGIAWADVSTGELTVAACPRPQLGPMLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P838</accession>
    <name>A0A2M9P838_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_18895</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001524">
        <property type="protein sequence ID" value="PJN93716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="48"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16792" checksum="54E11730C59261D1" modified="2018-04-25" version="1">MAEILTKARARNVFYGGSLFFAGVFALLAWQSHHYIVTKSTAALPLTPEVVLGKHAWERNSCINCHTLHGEGAYFAPELGNVTTRWGVYDDPEAAFEVMKGWLEAQPSGAEGRRQMPRFELSDEEIRGLSEFLRWADHNDTQGWPPNDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P879</accession>
    <name>A0A2M9P879_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Toxic anion resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001511">
        <property type="protein sequence ID" value="PJN93728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008863">
        <property type="entry name" value="Toxic_anion-R_TelA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05816">
        <property type="entry name" value="TelA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13358" checksum="7B528189B7F00F91" modified="2018-04-25" version="1" fragment="single">MSEDVRAQAQATLTEVQAVTATILPEPKGELAPATDPAVQAEIDKRKAELNVSDTQSIIRFGSKAQAELQVISQEMLSGVRSKDVGPAGNSLREIVTSIRGFSVQELDPNRERSLWERITGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C8</accession>
    <name>A0A2M9P8C8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Lipoyl-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001447">
        <property type="protein sequence ID" value="PJN93795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="1">
        <location>
            <begin position="4"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="179" mass="19167" checksum="636B8182C28859CC" modified="2018-04-25" version="1" fragment="single">MRGQGPVLASTKSFSLVSATVATWFKKVGDAVKVDEMLCELETDKVTVEVPANAAGVLQEIVAKEGETVGLDALLATINEKAESMPAQKAAAKPAPATEKAAEKAVDVMVPALGESVTEATVATWFKKVGDAVAQDEMLCELETDKVVIERGDLLADKEALELVRSYYSIPEAQRRRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D0</accession>
    <name>A0A2M9P8D0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribulose-bisphosphate carboxylase large subunit</fullName>
            <ecNumber evidence="2">4.1.1.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">rbcL</name>
        <name evidence="2" type="ORF">CNY89_18465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.39" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001463">
        <property type="protein sequence ID" value="PJN93778.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016984">
        <property type="term" value="F:ribulose-bisphosphate carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033966">
        <property type="entry name" value="RuBisCO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000685">
        <property type="entry name" value="RuBisCO_lsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036376">
        <property type="entry name" value="RuBisCO_lsu_C_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42704">
        <property type="entry name" value="PTHR42704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00016">
        <property type="entry name" value="RuBisCO_large"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51649">
        <property type="entry name" value="SSF51649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuBisCO_large" evidence="1">
        <location>
            <begin position="1"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93778.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19996" checksum="0227E5E9A855140A" modified="2018-04-25" version="1" fragment="single">YTRQKKHGISFRVIAKWMRLAGVDHIHAGTAVGKLEGDPPTVQGYYNVCREMHNPVDLARGLYFEQDWADIKKVMPVASGGIHAGQMHQLLDLFGDDVVLQFGGGTIGHPMGIQAGATANRVALEAMVFARNEGRDIANEGPEILRAAAKWCKPLEAALDTWGNISFNYTSTDTSDFVPTAAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L3</accession>
    <name>A0A2M9P8L3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Oxygen-dependent coproporphyrinogen oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17900</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001387">
        <property type="protein sequence ID" value="PJN93871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004109">
        <property type="term" value="F:coproporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006783">
        <property type="term" value="P:heme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001260">
        <property type="entry name" value="Coprogen_oxidase_aer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036406">
        <property type="entry name" value="Coprogen_oxidase_aer_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755">
        <property type="entry name" value="PTHR10755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01218">
        <property type="entry name" value="Coprogen_oxidas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00073">
        <property type="entry name" value="COPRGNOXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102886">
        <property type="entry name" value="SSF102886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="23871" checksum="344215B898075787" modified="2018-04-25" version="1" fragment="single">PEAQRSLTARKAIPGLEADPRFWAAGISLVAHLRSPLTPAVHMNTRMFWTSGGWWFGGGSDLNPMIEDPEDTAFFHERLREACARHDPDYYPRFKAWADEYFLIRHWNEPRGVGGIFYDDLCTGDWEADFAFTQDVGRAFLEAYVPLITRHMRRPWTDEQREIQLVKRGRYAEFNLVYDRGTRFGLETGHNPEAVLMSLPPIAKWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V7</accession>
    <name>A0A2M9P8V7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(S)-ureidoglycine aminohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001302">
        <property type="protein sequence ID" value="PJN93967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071522">
        <property type="term" value="F:ureidoglycine aminohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02212">
        <property type="entry name" value="cupin_UGlyAH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044697">
        <property type="entry name" value="UGlyAH_cupin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="13"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11295" checksum="79D0FBDA72FE367D" modified="2018-04-25" version="1" fragment="single">DHSDMRLDMHVTIVNLEPGAEIPFMETHVMEHGLYVLEGKGVYKLNRDWVEVEAGDFMWLRAFCPQGCYAGGHGRFRYLLYKDVNRHPRLRGAGGFGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P953</accession>
    <name>A0A2M9P953_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Phosphoribosyl-AMP cyclohydrolase</fullName>
            <shortName evidence="7">PRA-CH</shortName>
            <ecNumber evidence="7">3.5.4.19</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hisI</name>
        <name evidence="9" type="ORF">CNY89_16790</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>1-(5-phospho-beta-D-ribosyl)-5'-AMP + H2O = 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide</text>
            <dbReference type="Rhea" id="RHEA:20049"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58435"/>
            <dbReference type="ChEBI" id="CHEBI:59457"/>
            <dbReference type="EC" id="3.5.4.19"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="7">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="7">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 3/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the PRA-CH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.4.19" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01001238">
        <property type="protein sequence ID" value="PJN94050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00008"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004635">
        <property type="term" value="F:phosphoribosyl-AMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01021">
        <property type="entry name" value="HisI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026660">
        <property type="entry name" value="PRA-CH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002496">
        <property type="entry name" value="PRib_AMP_CycHydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038019">
        <property type="entry name" value="PRib_AMP_CycHydrolase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01502">
        <property type="entry name" value="PRA-CH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141734">
        <property type="entry name" value="SSF141734"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="5 7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PRA-CH" evidence="8">
        <location>
            <begin position="30"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="81"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01021"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13471" checksum="04CF4C405945D33C" modified="2018-04-25" version="1">MTRFDPETLLWTEDGLIPAIAQAEDGEVLMMAWMNRASLDETLAGGRVVYWSRSRQELWRKGDTSGHVQRLVELRVDCDRDCLLLVVDQTGPACHTNRRSCFYTAVRDGTEAILSDPIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P967</accession>
    <name>A0A2M9P967_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">APH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001222">
        <property type="protein sequence ID" value="PJN94075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004672">
        <property type="term" value="F:protein kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002575">
        <property type="entry name" value="Aminoglycoside_PTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008271">
        <property type="entry name" value="Ser/Thr_kinase_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01636">
        <property type="entry name" value="APH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00108">
        <property type="entry name" value="PROTEIN_KINASE_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="APH" evidence="1">
        <location>
            <begin position="35"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="27143" checksum="C9F49477E80ED4F7" modified="2018-04-25" version="1" fragment="single">MHLTAANLPHFLTSRGLLDPEVIVGGDVGVLDASRRNRNFKVLRRGAPGLFVKQMREMQPDAMLTLRREATCYQIASGHPALSRLMPKLVRYEPTRHVLVLELLPEAESLLGYYGRMKGFPAEIGRLLGQGLGVYHSQAGELLVDKRLSGLLVRQIPVILTLGQGGHGMLRNFGRIGPAVSALLQQHAEFQSLLDALGAEWRFDSLIHGDMKWDNVLVFPSPVDLDFRIVDWEMADCGDAGWDVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P974</accession>
    <name>A0A2M9P974_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16550</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001207">
        <property type="protein sequence ID" value="PJN94097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="55"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15782" checksum="D377DF4EF4FD3FB7" modified="2018-04-25" version="1" fragment="single">MRAGTRRRHTEDEEESAFVSMTDMTVSFLFIVMVLLAFFASQFDDAQEKVPKTWLDQAIQERDAALAEAVRLSEALEAAQTQIAVLKRQVANLERDLEDAKQEIADLLEEIARLEERLRRLEIRDPLEAYISASAAER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P979</accession>
    <name>A0A2M9P979_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001225">
        <property type="protein sequence ID" value="PJN94069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8293" checksum="51E966AE4162EBC3" modified="2018-04-25" version="1">MNVVDFREARVRAESELADNLIREIGWDVGGELRRLAHFLQEPADRERIEIIAEAVEAKLGFRLKPVFCEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D7</accession>
    <name>A0A2M9P9D7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LPS export ABC transporter permease LptG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16185</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001164">
        <property type="protein sequence ID" value="PJN94156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005495">
        <property type="entry name" value="LptG/LptF_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33529">
        <property type="entry name" value="PTHR33529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03739">
        <property type="entry name" value="LptF_LptG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11161" checksum="C15AA06EAB9B0291" modified="2018-04-25" version="1" fragment="single">MTLWRYLLTCFLKSLVAVQTVIAIVVLLAAGVENLRRFSEASAREVAAVTLLQAPEVLYQAFPLVLMLSSLVTFLRLARASELVVMRAAGVSALRLIAVPGFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E9</accession>
    <name>A0A2M9P9E9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16130</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001157">
        <property type="protein sequence ID" value="PJN94166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="198"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="235"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="259"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="331" mass="35113" checksum="CB6A93548E3A7F9D" modified="2018-04-25" version="1">MTKTPVSQAPKTLLDRSDSRVTHAAGIGGTLRQFLDQVRAGDLGSLPVIVGLAIIWTVFSTLNPVFLSSNNLVNLLFDCSTVGVIALGIVCVLMLGEIDLSVGSMSGVASALIGVIWVKLGAPLPLAIMAALALGALMGALYATLRTRLGMPSFVSTLSGLMALLGLQLYLLGSTGSINLPYGSWMVSFGQLLIMPDWLSHTLALVPGAVLLILGMRTNDRRRQANLSAGSLGGLLLKVAAVTIGLEAAVWYLNLGRGIPWMFGLFVLLVVGMNYAFTRTKWGRSMMAVGGNAEAARRAGINVRRIYLSAFMLCSMFAASGFGLDLPRRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y0</accession>
    <name>A0A2M9P9Y0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001038">
        <property type="protein sequence ID" value="PJN94339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="247" mass="26794" checksum="E506162A0D964E82" modified="2018-04-25" version="1" fragment="single">GERLLCEFISAGALTNYIHLRTDLRSPVLMQELDTALGLHEFSFVCPETNTDLPRYQPIGEAELASALPVLTHCSVFYADRLSESILVAMKTAWSAGAVVFFEPSDISDETMFDEAMEMVSVLKYSIDRLGDRVSDVSTRCVRIVTHGAAGLEVRHGEDTHWCRAMDAPVVLDTCGSGDMVSVGVIDWIISKRIGIDGLTAVNLIGGIVAGQRLAAENCAYAGARGLFRNRGAGYVQRVLRKDPAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y5</accession>
    <name>A0A2M9P9Y5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">UPF0434 protein CNY89_15095</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0434 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001037">
        <property type="protein sequence ID" value="PJN94342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01187">
        <property type="entry name" value="UPF0434"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005651">
        <property type="entry name" value="Trm112-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03966">
        <property type="entry name" value="Trm112p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6805" checksum="8A6D65F27ADDCD8F" modified="2018-04-25" version="1">MSEGSGVDIDPRLLDLLVCPVTRGALTYDRARQELVSRQAKLAFPIHDGIPVMLVDEARALD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA84</accession>
    <name>A0A2M9PA84_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000971">
        <property type="protein sequence ID" value="PJN94448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17608" checksum="20F6DE88517AF978" modified="2018-04-25" version="1">MRRDATSAARIWRSAATRSPRVGGFPDSLGRVGATLLGGEESFVVESLADLGMGAVYDGSIAVWHCIPAERLTTDWVARRAFWEGVSQVAMTKALRRPVPRWLWRPKLALSLPLLWPLRLLSSNPDGIIRYHMALGACLAQSPKRLGQIWTGGSECRIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC5</accession>
    <name>A0A2M9PAC5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000947">
        <property type="protein sequence ID" value="PJN94487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6840" checksum="1A17265F951D81E2" modified="2018-04-25" version="1" fragment="single">MKNGAQGMSKIAKSTGEPAKRCTASRSLSPDAGLARSFGWTERRSIARNTRASSRACAVAPMRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF1</accession>
    <name>A0A2M9PAF1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Anhydro-N-acetylmuramic acid kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000928">
        <property type="protein sequence ID" value="PJN94523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006040">
        <property type="term" value="P:amino sugar metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009254">
        <property type="term" value="P:peptidoglycan turnover"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005338">
        <property type="entry name" value="Anhydro_N_Ac-Mur_kinase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03702">
        <property type="entry name" value="AnmK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="4594" checksum="E6F3525D7A2CBD60" modified="2018-04-25" version="1" fragment="single">MLALGLMSGTSLDGVDAALVETDGESVTAFGRGAVRPYGPQERVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI2</accession>
    <name>A0A2M9PAI2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Flagellin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13790</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Bacterial flagellum</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial flagellin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000908">
        <property type="protein sequence ID" value="PJN94560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009288">
        <property type="term" value="C:bacterial-type flagellum"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001492">
        <property type="entry name" value="Flagellin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046358">
        <property type="entry name" value="Flagellin_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001029">
        <property type="entry name" value="Flagellin_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42792">
        <property type="entry name" value="PTHR42792"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00700">
        <property type="entry name" value="Flagellin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00669">
        <property type="entry name" value="Flagellin_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="6" id="KW-0966">Cell projection</keyword>
    <keyword evidence="6" id="KW-0969">Cilium</keyword>
    <keyword evidence="6" id="KW-0282">Flagellum</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Flagellin_N" evidence="4">
        <location>
            <begin position="2"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="Flagellin_C" evidence="5">
        <location>
            <begin position="134"/>
            <end position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="220" mass="22826" checksum="58C52DB15AA1B59B" modified="2018-04-25" version="1">MTSDVGAYKKMSESLTAASETIGVARNAAEQMVDILKQVQEKVIEGKKPGADLAKLQADVDAMTATMQSIGASAQVNGINMVNNTDTQSFSVSLTRVGAGDVGLEVLGVDGVDLVTDAAADVTLVADATDESDLDAIETQLQAAIDAAAGFGSAQIRIDAQNEFLGKQMDSIRTAAGAMVDADMEEASARLTALQTQQQLGIQALSIANQAPQSIMSLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR2</accession>
    <name>A0A2M9PAR2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13405</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000866">
        <property type="protein sequence ID" value="PJN94625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="442"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="50359" checksum="6E18955F2A6DC383" modified="2018-04-25" version="1" fragment="single">MEEYQRQCAAQRETQHPIACRTAGCAAHRLSVADHPDRYRRFGRTATGDPRYQCKGCKGTFSVGRPTRRQKRSDKNGLVLRLLINGSPLSKISEITGLSYTDIYRKIDFIHERVRAFTVAREGDLSRVDWTTRGSRVATDSQSLTLNWPTKRERTPIVVQHLCSAHARSGFILLSSLQFDPVPEMADIQASMTAAGDFQKDRCFRQQGRLWSESEFQAHIAALKRNRAVKDTDLYQLPHSGALVRLDVLQYAHAMLLRDAFIFYDGPLLFVIDRDPGLGPAFAHAFREEIRGGRAMIAQVAFHKGFSNDERIKTVMVGRQQLARETGKTLAELAALTDEEYAALVDQQVATHLVGYAFGGRQWFDWPYHTKSEPLKKVQFLTDDTTLTYSKKARLVRLATLRSVDSYFHRVRSNLRFAARPGISHGSDGRSWDRYYLYRPEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR6</accession>
    <name>A0A2M9PAR6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000875">
        <property type="protein sequence ID" value="PJN94612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="17309" checksum="2158A0DFAE577C41" modified="2018-04-25" version="1">MDQLRRGFEHSLEFDRLENIRQIYAMEADAQAIATLYAWSERAAKPELWDAAGSIAHYEDIRTAFGDTLASTADLGLAGRAAFTAWYASDWRRESYYLSACSQYLDRLDAAHALQRYDPLPDGYFDDLCLLPDGTNYGCHLTPEIRGTWAIAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS8</accession>
    <name>A0A2M9PAS8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron-regulated protein FrpC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000856">
        <property type="protein sequence ID" value="PJN94640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="25924" checksum="86A921C506875BE7" modified="2018-04-25" version="1" fragment="single">GDPGGSLESSAWGGDGNDTISLIGRGGSLSDDIIHAAYGEAGDDTITSRIGGGTNYPDDYLRADAILDGGAGNDALTAATAFDPEDVLVGGAKLYGRAGNDILRVYGGGENILDGGNGDDMITGGSGADRLIGGAGADSLRGGAGNDAFVFQWMAGRTAAIRDTIHDFGTSEASRRGDDVIDVSAIDANVNRGGNQAFTFGTQTGVGRLWVEDDPDSASTLVMANNGGPQMLVIAVQDWTSREASDWVRGDFVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV8</accession>
    <name>A0A2M9PAV8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FAS1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000840">
        <property type="protein sequence ID" value="PJN94665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036378">
        <property type="entry name" value="FAS1_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000782">
        <property type="entry name" value="FAS1_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02469">
        <property type="entry name" value="Fasciclin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00554">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82153">
        <property type="entry name" value="SSF82153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50213">
        <property type="entry name" value="FAS1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAS1" evidence="1">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10025" checksum="0A5D60F4E4B81A05" modified="2018-04-25" version="1">MRPDLHRPGLRGAGATRLSGEALTAFLAYHVVPGELTADYMEGFDLNHTTLTGRPLNVDGRSGLIRVGGVATVTRPDLPAANGVVHVIDQALSPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX7</accession>
    <name>A0A2M9PAX7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000825">
        <property type="protein sequence ID" value="PJN94693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="100"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="13313" checksum="41767DF2A0396B36" modified="2018-04-25" version="1">MDILVSSAYLSAMLARLISILAILAIAVVTTVSAAHAARMVGMQVDHAVHAGEMMHASTDGHPSCDGGQHCGSADAGMCEFVCAGLSVVLTMPGAETGHAFGPASHDLPSEPSHVSSSPGLNERPPKLSLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB06</accession>
    <name>A0A2M9PB06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cytochrome C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_12795</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000809">
        <property type="protein sequence ID" value="PJN94723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="99"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22691" checksum="7C258E02BA700E41" modified="2018-04-25" version="1" fragment="single">AFTAYAPNITPGGPVATWSDAELAHAIREGLRPDGSLIGPPMPFTMYRGISDDDLAAVVAFLRTLPAVQNETPASTYRIPLPPAYGPPVGHVTAPERGVTAEYGAYMATAITHCMECHTPMGPQGPMLDTGLGQGGFEFHGPWGVSIAANLTSGEDGLAGYSDDEIKAMITQGRRPDGTAMLPPMPYAYLARMTPEDLDAIVLYLRALPPLPDPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB74</accession>
    <name>A0A2M9PB74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000775">
        <property type="protein sequence ID" value="PJN94781.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="62"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94781.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13077" checksum="2630C75C9764EA32" modified="2018-04-25" version="1">MNPATTDQIPFFITAPGASDTLMTVMAVFLLVAVLSVGLFYLKIHALPEHMAHRSQKVQMQFVAVLALLALFTHNNALWVAALLIALIDLPDFGTPMASMAASLEKMSGRSPADPSAPEEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC9</accession>
    <name>A0A2M9PBC9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Replication protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000740">
        <property type="protein sequence ID" value="PJN94838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16405">
        <property type="entry name" value="RepB_like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037972">
        <property type="entry name" value="RepB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="92"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="322" mass="35370" checksum="9E887BA3CF861BDC" modified="2018-04-25" version="1" fragment="single">MSRRRRIFELDMPEEAGGAPAPAPEPERETFPVGKVEEDGRVAPRRGPMATAVQENAEALRARAEVEAAIRAENDALAAELVRLKAEGLVVDLVPLEAIDAHLLIRDRNRGPDPDLAELKTSIREIGLSNPIQVEPRGDGRYELVQGMRRLSAYRELLAETGDPRYARIPAGLMTDGAGLEGLYRRMVDENLVRKDISFAEMAELARSYAADPATDCDDPDKAVAILFQSAGYQKRSYIRAFVGLLDRLGEELAYPQEIPRSLGLDLRRRLEEEPDLAMAIRAELRDWEGRTIQDELGVLRRWAGAGAGGGGGDLPRGEGPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM1</accession>
    <name>A0A2M9PBM1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sodium:alanine symporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_11555</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000695">
        <property type="protein sequence ID" value="PJN94922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015655">
        <property type="term" value="F:alanine:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001463">
        <property type="entry name" value="Na/Ala_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30330">
        <property type="entry name" value="PTHR30330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01235">
        <property type="entry name" value="Na_Ala_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00175">
        <property type="entry name" value="NAALASMPORT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00835">
        <property type="entry name" value="agcS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00873">
        <property type="entry name" value="NA_ALANINE_SYMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0769">Symport</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="64"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="149"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="184"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="215"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="242"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="310"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="350"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="395"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="420"/>
            <end position="439"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="452" mass="47113" checksum="A93C2060B259E6A7" modified="2018-04-25" version="1">METLTAVITAINNFVWGPPMLVLILGTGLFLQLRLKLMPILNIGRGFRMVWRGRKPEAGAEGEITPYAALMTALAATVGTGNIAGVATAIAIGGPGAMFWMWMTALVGMATKYAEVLLAVHYRETDDHGEHVGGPMFAIKNGLGAHWRWLGAAFAIFGGLAGFGIGNMVQSNSIAQVLEGNFGVSPWVTGVVLAVLTGFVLIGGVKRIGAVAEKLVPFMCVSYIVAALAVLAIYAADVPAAFALIFESAFNPVAAGGGFAGSTIMLAMRYGVARGIFSNEAGLGTAGIAQAAGQTTNAAQSGLIGMMGTFIDTILVCTMTGLVLIVTGVWNSGVSGAALTSSAFDTAFPGIGASFLAIALAVFAYTTILGWAYYGEKCWEYLVGTKVETPYRAAWTVFVLIGAVTQLDFVWLVADTLNAFMAFPNLVSLLLLSPVVAKVTNDYFASQKGLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC12</accession>
    <name>A0A2M9PC12_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Phosphoglycerate kinase</fullName>
            <ecNumber evidence="2 7">2.7.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pgk</name>
        <name evidence="8" type="ORF">CNY89_10830</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(2R)-3-phosphoglycerate + ATP = (2R)-3-phospho-glyceroyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:14801"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57604"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.3"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the phosphoglycerate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.3" evidence="2 7"/>
    <dbReference type="EMBL" id="PHNO01000634">
        <property type="protein sequence ID" value="PJN95044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004618">
        <property type="term" value="F:phosphoglycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001576">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015824">
        <property type="entry name" value="Phosphoglycerate_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036043">
        <property type="entry name" value="Phosphoglycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406">
        <property type="entry name" value="PTHR11406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00162">
        <property type="entry name" value="PGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00477">
        <property type="entry name" value="PHGLYCKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53748">
        <property type="entry name" value="SSF53748"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="11940" checksum="CFA3E870A2A6CC84" modified="2018-04-25" version="1" fragment="single">ASETVLADACPEDAMILDAGPASVVRVVEAFGMAKTLVWNGPLGAFEIEPFNAATDAAALAAAKLTREGKLLSVAGGGDTVAALNASGAAEDFSYVSTAGGAFLEWLEGKTLPGVAALEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC36</accession>
    <name>A0A2M9PC36_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyl-CoA synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000601">
        <property type="protein sequence ID" value="PJN95111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="4"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="2">
        <location>
            <begin position="405"/>
            <end position="479"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="492" mass="53173" checksum="EBEB373C93B6F3F8" modified="2018-04-25" version="1" fragment="single">ETAIRCRRLASALRRRGVEKGQTVALLAANTPELFEAHFGVPMMGGVLNAINTRLDPEAIAFILSHGEAKILFVDLEFSATAKRALALLGKRIPVIDIDDPAYEGGALIGETDYEALLAEGDPTEVFEGPADEWEPIALNYTSGTTGNPKGVVYHHRGAYLNAVSNVQSWGLSGAPVYLWTLPMFHCNGWCFPWTIAATAGVSVCLRAVRVEPIMQLIRDEKVTHFCGAPIVLNLINNSDPALREGIEHKVKAMVAGAAPPAAVIAGMERLGWEVTHVYGLTECYGPSMVNVWHDKWDGLDLEERAAIKARQGVRGPVLEAAMVADPATLAPVPRDGRTIGEIFMRGNNVCSGYLKNPTATAEAFEGGWFHTGDLAVWHADGYVEIKDRSKDIIISGGENVSSIEVEDVIYRHPDVMEVAVVARPDAKWGETPCAFVALKPGAAVTEAEIIAFCKSQLAGFKVPRTVVFGPLPRTQTGKVQKFVLRATASEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE5</accession>
    <name>A0A2M9PCE5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Glycine--tRNA ligase beta subunit</fullName>
            <ecNumber evidence="3">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Glycyl-tRNA synthetase beta subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_10000</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000567">
        <property type="protein sequence ID" value="PJN95182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015944">
        <property type="entry name" value="Gly-tRNA-synth_bsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30075">
        <property type="entry name" value="PTHR30075"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02092">
        <property type="entry name" value="tRNA_synt_2f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01045">
        <property type="entry name" value="TRNASYNTHGB"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="379"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="379" mass="41495" checksum="862B62064000E15F" modified="2018-04-25" version="1" fragment="single">MSDLLLELLSEEIPARMQGKAADDLRRLVTDGLVERGLTYGHAAAFATPRRLVLAIEGLAERSSPVREERKGPRVDAPAQAVEGFLRSTGLTRDQLEVRADKKAQVYFAVTVKPGREAAGIVAETVEAVVRGFPWPKAMRWGSGDLRWVRPLQSILCLLSRQDGADVVPLEIDGLRAGQETRGHRFLAPDRFAVAGYDDYAARLRRAFVLLDPAERAARIAHDAGQLAFARGLEVVEDPRLLAEIAGLVEWPVTLMGRIEERFLDLPPEVLQTSMREHQKFLSARNPATGRIEAYVVVANRETADHGAAILAGNARVLAARLSDAAFFWENDLATPLEEMAGKLGAVTFHNKLGTQGERIARIAALARELAALARELAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI8</accession>
    <name>A0A2M9PCI8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09525</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000527">
        <property type="protein sequence ID" value="PJN95256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008746">
        <property type="term" value="F:NAD(P)+ transhydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902600">
        <property type="term" value="P:proton transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007886">
        <property type="entry name" value="AlaDH/PNT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007698">
        <property type="entry name" value="AlaDH/PNT_NAD(H)-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026255">
        <property type="entry name" value="NADP_transhyd_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01262">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05222">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01002">
        <property type="entry name" value="AlaDh_PNT_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01003">
        <property type="entry name" value="AlaDh_PNT_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00561">
        <property type="entry name" value="pntA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AlaDh_PNT_N" evidence="3">
        <location>
            <begin position="4"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="domain" description="AlaDh_PNT_C" evidence="2">
        <location>
            <begin position="148"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="365"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM01002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM01003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="398" mass="41740" checksum="8F0CAD9FA95FBA44" modified="2018-04-25" version="1" fragment="single">MKIGAPREIFEGERRVALTPQSAIALKKLGYESLVESGAGLAAGFSDAAYAEAGVTVVPSAADLWSQADVVAKIRPPEVAEVDLAHQGQILVSFLYPAQNAELLETLKGKGVTALAMDMVPRISRAQKMDALSSMANIAGYRAVIEAGANFGRFFTGQITAAGKVPPAKVLVVGAGVAGLAAIGTAVSLGAITYAFDVRPEVAEQIESMGAEFVFLDFEEAQDGAATGGYAAPSSPEFREKQLAKFLELAPEIDIVITTALIPGRPAPKLWTAEMVAAMKPGSVVVDLAAERGGNCDLTVPDQIVESPNGVKIVGYTDYPSRMAAQSSTLYSTNIRHMMDDLTPGKDGTPVVNMEDDVIRGATATKDGEITFPPPPPKVQAIAAAKPKPKAVEETREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM3</accession>
    <name>A0A2M9PCM3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000522">
        <property type="protein sequence ID" value="PJN95268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9615" checksum="88384CF4619B4BB4" modified="2018-04-25" version="1" fragment="single">MDNRIGEMQVFSRVAGTGSFSEAARQLGMTPSTVSKLIGRIEARLGVRLVERSTRRLALTVEGEIYHERSQVLLAELDGIERELAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN6</accession>
    <name>A0A2M9PCN6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage terminase small subunit P27 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000512">
        <property type="protein sequence ID" value="PJN95293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006448">
        <property type="entry name" value="Phage_term_ssu_P27"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05119">
        <property type="entry name" value="Terminase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01558">
        <property type="entry name" value="sm_term_P27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13467" checksum="B08228A47D7136BE" modified="2018-04-25" version="1">MKGPKPRLVIDNDAVKVAPSAPAWLSTEAAAEWRRIMPALVLRRILTTADLGSVENYCVAQGRVRQVEKLIAMANPDALPALTRMQDKAMTTARQLAAELGLTPVSRSRPAMRDEDDDDSLLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP9</accession>
    <name>A0A2M9PCP9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000517">
        <property type="protein sequence ID" value="PJN95284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="22746" checksum="09D81971F66F9916" modified="2018-04-25" version="1">MGKSSTAVAAVAPAVAETWGGTDVLMLNAGVQPGSSLFGPLEDWARVLDVNLWGVIHGARAFVPGMIARGRAGAVIVTGSKQGITNPPGDPAYNVSKAGVKIFAEALAHDLRQIAGHALTAHLLIPGFVFTGLTAGDRTEKPAAAWTPDQTADFLLERLEAGDFYILCPDNEVDRGLDARRILWAAGDIVENRPALSRWRPDHAEAFAAFIRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY1</accession>
    <name>A0A2M9PCY1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xylose isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000464">
        <property type="protein sequence ID" value="PJN95406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="18"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="25486" checksum="3A2FA15411058779" modified="2018-04-25" version="1" fragment="single">MICISHLTALDAEPELMVEAAAKAGFDGLGLRIFPPSHAPDQYPIVGDWPRIRRLRAMADDLGVRIFEAESFGIDKDFAPDPYARALEAAAALGAGLVVSAGIDEDAGRLAENYRRLAEAAAGQGLLMAMEFMPYRGMRTLDDALAMHRAVDHPNAKLLIDAIHLSRSGAGVAEIAAIPDRSIIGHFHISDAPAVPPARLEDKLAESRSGRLYPGEGGLPLRALVELLPEGCPISLEAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD07</accession>
    <name>A0A2M9PD07_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08495</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000452">
        <property type="protein sequence ID" value="PJN95435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008922">
        <property type="entry name" value="Di-copper_centre_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002227">
        <property type="entry name" value="Tyrosinase_Cu-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00264">
        <property type="entry name" value="Tyrosinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00092">
        <property type="entry name" value="TYROSINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48056">
        <property type="entry name" value="SSF48056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00497">
        <property type="entry name" value="TYROSINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00498">
        <property type="entry name" value="TYROSINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyrosinase_Cu-bd" evidence="2">
        <location>
            <begin position="209"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosinase_Cu-bd" evidence="3">
        <location>
            <begin position="365"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="389"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="41"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="398"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="422"/>
            <end position="436"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="549" mass="60109" checksum="440269906F850989" modified="2018-04-25" version="1">MRIGKSCGRLPSFLERWQRSLSLRPSAGGGPLYPGSRRDTGIEPGSSSSPTTSSPDIWVRRVPDPNYNPAPFNVSSPTWTPQPHQNAQYVDPALSAPNFVYVRVRNRGSGATPAGARLKIYWTKISGAQSWPTAWVDYFAQVNGRSLLNGMEITKPRVNAANATQAERDAYVQAILNADTSNFAFPNGVTFWDMQNVIHSAGPIMSAAHGNPAFLPWHREFVNRYEALLQKTNPTLKLLYWDWTQDPRQPINGFSYFSTNFMGAIGAGTNTQVRAPFVPLMTPVQLLRNSRAPGQAFGFRSDPSVLARAQYHNLTGNNGLRSFMETGSYHNRAHVDIGGSQPATCSTQPSTCNYSLSYVAQAARDPFFFLLHGNVDRLWAQWQRANPQRFDSRPGATPYGLDSSNANITRTMPPWDGTTGIAPWRSGSSSVRRKTSLDPSIVSPPIYDTAPLTIPVLQAGQAVVMQVPWFPPDPAPFGSTGFSLLARIETSTTAPYGMTFAETSAVPTNIRNNNNIARLNMTVLAASAGASARAQATTTLANEFPPRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD11</accession>
    <name>A0A2M9PD11_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MBL fold metallo-hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000455">
        <property type="protein sequence ID" value="PJN95429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050313">
        <property type="term" value="F:sulfur dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07724">
        <property type="entry name" value="POD-like_MBL-fold"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044528">
        <property type="entry name" value="POD-like_MBL-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="26"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="298" mass="32585" checksum="31BF276CE471F3F2" modified="2018-04-25" version="1">MEESMPYPIDMSVRPEVTGFFDPATNTISYVVKDPASDACAVVDSVMDIDYAAGRISYAHADEIIAFVQKNRLRVEWLIETHVHADHLSAAPYIQARLGGKLGIGANITVVQETFGKIFNEGTEFQRDGSQFDRLFEDGDTYTIGTMQAFAMHTPGHTPACMTHVVGDAAFVGDTLFMPDGGSARADFPGGDAGTLYDSIQKVLALPDEMRLFMCHDYGPNGRDIQWETTVGAEKAHNIHVGGGATREAFIKFRTERDATLDMPKLIIPSLQVNMRAGELPPPDESGKRFLKVPVNGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD58</accession>
    <name>A0A2M9PD58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000438">
        <property type="protein sequence ID" value="PJN95470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="386" mass="41084" checksum="84256188D8C63EF4" modified="2018-04-25" version="1">MSINNREDWLAQWSEYGLFFTDHLYIGNNRLVPPGSYTADWDTGEVDSVTFKGTGGRDTLLGGGGELAAIFIGTRGNDLYGGGLALGDEEAFSYGVVDYSGARSSVVVNMDLRGSRTFTDETGEVRTVSIIGRALKDGFGGHDDFLEGTAFGGGYSSVTTVIGSRFADTMVGQTFDGLYGGRGDDHLAGNALYGGRGRDVLIGSAPEGSSVVLFGEEGDDWIFGTDGPGRTDVYLVGGAGDDRIFAGAGDDFVDGGLGKDVILSGAGNDVINPDVEYFQRDPTQPRDGARDVILVTRADLGAYRDRILFNAFEEGRDQIRFGDAVRGGKDFRVYQEDDTAHPGRVNTILQIDRNGDGFGEGAADVSDYFLVAQGADLSLHHGYLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD93</accession>
    <name>A0A2M9PD93_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000419">
        <property type="protein sequence ID" value="PJN95517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014696188" evidence="1">
        <location>
            <begin position="24"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="12147" checksum="B3F3234A0C7EB6B5" modified="2018-04-25" version="1">MTRWRHPALVLSLFLGMAVSAGAQETCLRPIQPEEIQPPRDDPEFRAFLNQEYQAYLLGMQDYLNCLGREHDSARKETSEVMSRWALWFGDDAVIRQHQNPSSPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB0</accession>
    <name>A0A2M9PDB0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hybrid sensor histidine kinase/response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07965</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000414">
        <property type="protein sequence ID" value="PJN95526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="6"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13048" checksum="322BB3690DB5A94D" modified="2018-04-25" version="1" fragment="single">AAPRGLVLVIDDNHELRHTVRRQLARLGYAVIEAEGGEEALALVETLPEIRAIVTDVVMPGMSGFRLAREAARLRPDLRIVLMTGFDGADQADREGLSLPVLTKPFEPERLLRAIESAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK4</accession>
    <name>A0A2M9PDK4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000383">
        <property type="protein sequence ID" value="PJN95594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_11" evidence="1">
        <location>
            <begin position="22"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15127" checksum="A05A3340C4D0D106" modified="2018-04-25" version="1" fragment="single">YARVEPAIAAYAKACRLMGPAGSGQLAKMVNQIAIAGLLQGLSEALAFAQKAGLDGEAVLGVISKGAAGSWQMENRGHTMLADKFDFGFAVDWMRKDLGICLAEADLNGALLPVTALVDQFYKELQGEGGGRLDTSSLIRRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK7</accession>
    <name>A0A2M9PDK7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_07575</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000386">
        <property type="protein sequence ID" value="PJN95588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8775" checksum="DC90CFE13A6E8C75" modified="2018-04-25" version="1" fragment="single">MFGFTALELARIQFGFTVSFHIIFPAITIGLASYLAVLEGMWLWKKEGVYRDLYHFWSKVFAVNFAMGVVSGLVMAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ7</accession>
    <name>A0A2M9PDQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000348">
        <property type="protein sequence ID" value="PJN95680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009394">
        <property type="entry name" value="MmcB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06319">
        <property type="entry name" value="MmcB-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13116" checksum="A40251D2F5DA565F" modified="2018-04-25" version="1">MSDPTPSDLAPLRQPGQRLARGVCRLMRASGFAPVCEFVPAPRLRVDVIALGPRGEVWIVECKSSRADFASDRKWGGYLEWCDRFFWAVDAEFPVEILPEGRQDARSTMAWKSAFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU4</accession>
    <name>A0A2M9PDU4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 9">Chromosomal replication initiator protein DnaA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_07065</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the DnaA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000349">
        <property type="protein sequence ID" value="PJN95678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003688">
        <property type="term" value="F:DNA replication origin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006275">
        <property type="term" value="P:regulation of DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06571">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1750.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00377">
        <property type="entry name" value="DnaA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001957">
        <property type="entry name" value="Chromosome_initiator_DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020591">
        <property type="entry name" value="Chromosome_initiator_DnaA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018312">
        <property type="entry name" value="Chromosome_initiator_DnaA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013317">
        <property type="entry name" value="DnaA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013159">
        <property type="entry name" value="DnaA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30050:SF2">
        <property type="entry name" value="PTHR30050:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00308">
        <property type="entry name" value="Bac_DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08299">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00051">
        <property type="entry name" value="DNAA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00760">
        <property type="entry name" value="Bac_DnaA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00362">
        <property type="entry name" value="DnaA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01008">
        <property type="entry name" value="DNAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="11">
        <location>
            <begin position="51"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_DnaA_C" evidence="12">
        <location>
            <begin position="267"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006583"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000577"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM00760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="359" mass="40428" checksum="3448263D417BAE87" modified="2018-04-25" version="1" fragment="single">PAPEAAAISPELDLPQSPLDARFTFDTFVVGKPNELAHAAARRVADRDSVSFNPLFLYGGVGLGKTHLMHAIAWGVRQSDPSARILYLSAEQFMYRFISALRFKEMHGFKELFRSVDMLMVDDVQFIAGKDSTQDEFFHTFNALIDQHKQIIISADRAPGEIDGLEERIKSRLQWGLVVDLHPTDYELRLGILQSKAEAQLLEHPGVTIGSGVMEFLAHRISSNVRVLEGALNRLFAFASLVGRDINLDMTQECLADILRASERKVTIEEILRKVADHYNLRMSDLLSARRARNVARPRQVAMYLAKTLTSRSLPDIGRRFGGRDHTTVIHAVRKIEELKATDSQIAEDVELLRRMLEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU7</accession>
    <name>A0A2M9PDU7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000344">
        <property type="protein sequence ID" value="PJN95692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014624655" evidence="1">
        <location>
            <begin position="20"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="15869" checksum="91359B6256FF10A5" modified="2018-04-25" version="1">MQAWIAAGALALAATGAAAQDAPAPKGKFDYGFAGLMARDNRADLPPLTLSSGKPVAEAPIELKSGTYYRLKIVSDGTAELALSGGDFFRSIWVNEIVVNDIEIRPMGVHSLEFDAAGEAEMSFIAIVPGTYRLSIPGSHGDSQAATFVIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE42</accession>
    <name>A0A2M9PE42_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PBPb domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06440</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000304">
        <property type="protein sequence ID" value="PJN95792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="41"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="173" mass="18631" checksum="0BDFE9FE9FF6BFFA" modified="2018-04-25" version="1">MRRDRGLDVGHRRAPPPDRLHPALLPQPGPLHRPRGAEGDDNPAALAGKVVGVQRGTVNETYMEAHYPSAELRLYPNQEHVLLDLTLGRLDAALGEALQLETGFLDTPAGEGFVFFGPPQYDPAILGRGAAIGVRKDDPGLRDQLDAGIAAIRADGTYAAIAARYFDTDIYGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE61</accession>
    <name>A0A2M9PE61_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Oxidored_FMN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000291">
        <property type="protein sequence ID" value="PJN95826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001155">
        <property type="entry name" value="OxRdtase_FMN_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045247">
        <property type="entry name" value="Oye-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22893">
        <property type="entry name" value="PTHR22893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00724">
        <property type="entry name" value="Oxidored_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Oxidored_FMN" evidence="2">
        <location>
            <begin position="9"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16444" checksum="756CA920BFB117CA" modified="2018-04-25" version="1">MTSTEILRQPFALKSLKLKNRIVMAPMTRNFAPEGVPGAPNAAYYRRRAEADVGLILSEGTVIDRPAARNLPAIPFFHGAEALAGWKRVIDGVHAVGGRMGPQIWQSASQRRTASPTPTGRAERHKLPSLAAQSQSCAQRGAHDPGSGAEPALS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE73</accession>
    <name>A0A2M9PE73_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Head-tail adaptor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000287">
        <property type="protein sequence ID" value="PJN95841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008767">
        <property type="entry name" value="Phage_SPP1_head-tail_adaptor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038666">
        <property type="entry name" value="SSP1_head-tail_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05521">
        <property type="entry name" value="Phage_H_T_join"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01563">
        <property type="entry name" value="gp16_SPP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12442" checksum="EF22AE92E41F71C9" modified="2018-04-25" version="1">MTSLPAGKLDRRITIRRVVSETKNGVGGKNQTWGDLKTVWAQVKPISDGERWRAQELQVGAIATHRFTIRWGVGVTVLDRIRFDGREFEISGVKEIGRRVGQEITAVARAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK0</accession>
    <name>A0A2M9PEK0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cobaltochelatase subunit CobS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">cobS</name>
        <name evidence="3" type="ORF">CNY89_05465</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000247">
        <property type="protein sequence ID" value="PJN95948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025865">
        <property type="entry name" value="CobS_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006537">
        <property type="entry name" value="PD_CobS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12556">
        <property type="entry name" value="CobS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01650">
        <property type="entry name" value="PD_CobS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobS_N" evidence="2">
        <location>
            <begin position="7"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_5" evidence="1">
        <location>
            <begin position="66"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="327" mass="36576" checksum="8A19E7406A957536" modified="2018-04-25" version="1">MADGAEMAAEPTKELSVRDVFGIDSDLKVRGFAEPSDRVPDVDATYRFDRDTTLAILAGFVHNRRVMIQGYHGTGKSTHIEQVAARLNWPCVRVNLDSHISRIDLIGKDAIRLKDGVQVTEFQEGILPWALRNPVAIVFDEYDAGRPDVMFVIQRVLEVDGKLTLLDQNKVIRPHPYFRLFATANTVGLGDTTGLYHGTQQINQGQMDRWSLVATLNYLGHDAEADIVLAKYPEYATPEGRKTVSRMVTVADLTRSAFMNGDLSTVMSPRTVLAWAENARIFGDVGFAFRLTFLNKCDELERQTVAEFYQRCFDKELPESAVSVSLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL6</accession>
    <name>A0A2M9PEL6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MerR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000243">
        <property type="protein sequence ID" value="PJN95968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13411">
        <property type="entry name" value="MerR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH merR-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12623" checksum="44B1200D1893E16C" modified="2018-04-25" version="1" fragment="single">MDKSPEAFRTISEVADTLDVPTHVLRFWESRFPQVKPVKRGGGRRYYRPEDVRLLRGIRGLLYDDGMTIKGVQKILRERGLRHVIVLGTLPDGEPELRRIAVADAAQDQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP5</accession>
    <name>A0A2M9PEP5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000227">
        <property type="protein sequence ID" value="PJN96009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="25"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="32199" checksum="B43879442F9DBADF" modified="2018-04-25" version="1">MNKLGVHALVWEAGWSHDECARAIARTAEVGYDFIEAPSLDPSSIDVDYTRRQLEAAGIGINYSMGLDAETDISSGDREKAARGKARLEEALAVARDTGATHVCGIIHSAFQKNTVPTTAAGVAMSVDILRQVAETAAASGITLGLEVVNRYESNVLNTASQAVELIRRIGAPNVKAHLDVYHMNIEESDPAQAIMETAENIGYFHTGDSHRGYMGSGTVDLQSIFRALVRVGYTGPITFESFSSRVVGQPLEGILGIWRNLWEDSGDLATHALMYTRAQLKAAQEVQRQAERSRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV4</accession>
    <name>A0A2M9PEV4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000200">
        <property type="protein sequence ID" value="PJN96090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010781">
        <property type="entry name" value="DUF1376"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07120">
        <property type="entry name" value="DUF1376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="158"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="352" mass="38801" checksum="D01D68A6E2C825A6" modified="2018-04-25" version="1">MRAAHRQPGGGQPRHADRHARLAHDRPVPPRRDGPDQPAGDPPDGTRVRAQPEGVQVKKFNAAAARSKRPCPIWIDAFLRDTQHLAADEVGSYILILMAMWSRESCDFPDDDHRLARLCRMSLRLWKTRVGPVIRPFFRAVDGVLISKRLREEATYVERQCKAQSDRKTGENADKSLNDNDAPPSADATTDETADIPPDHPSQQPNNPTVREDDDESAGARQAAGSDRMNPPAPEPSFFDRVLAAAGMNPSDILAARWMPPAAEIEVNRWREIDPLLTEALIIDHVAQSAKRHTERARGPKAFEAGLRHLAAMLQAPAPAPLTLAGGGAARPNRPHQIISHEEMLAALRRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF60</accession>
    <name>A0A2M9PF60_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phasin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000178">
        <property type="protein sequence ID" value="PJN96166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018968">
        <property type="entry name" value="Phasin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010127">
        <property type="entry name" value="Phasin_subfam-1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09361">
        <property type="entry name" value="Phasin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01841">
        <property type="entry name" value="phasin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phasin_2" evidence="1">
        <location>
            <begin position="38"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16810" checksum="03F037673294025B" modified="2018-04-25" version="1">MFDPKTFSFDTEKFAEFFKQNDFTKQFASMKVPGFDAEALMATQSKNMEALVAANKAAAAGYQDLFKKQMAIFEETMTEAQKALKGFDATKLDAESAKAHGEVAKAAFEKALANMQALAESAQKANADAYEIVSARIQASLAELRDLAAKATTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF63</accession>
    <name>A0A2M9PF63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Thioredoxin family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04065</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000173">
        <property type="protein sequence ID" value="PJN96183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005243">
        <property type="entry name" value="Redox_disulphide_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36450">
        <property type="entry name" value="PTHR36450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13192">
        <property type="entry name" value="Thioredoxin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037031">
        <property type="entry name" value="Redox_disulphide_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00412">
        <property type="entry name" value="redox_disulf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin-like_fold" evidence="3">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="2">
        <location>
            <begin position="10"/>
            <end position="13"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR037031-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR037031-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7824" checksum="D2F1CC871558E947" modified="2018-04-25" version="1">MIIKILGSGCRKCMMLGENAKAAAAAAGREAELIKVTDFAEIAAYGVMSTPGLVIDERLVSTGRVLSAEEIGKLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG7</accession>
    <name>A0A2M9PFG7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000143">
        <property type="protein sequence ID" value="PJN96281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005331">
        <property type="entry name" value="Sulfotransferase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03567">
        <property type="entry name" value="Sulfotransfer_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="25687" checksum="183580B10F7FE821" modified="2018-04-25" version="1">MPLARIGGTVLFFVHIPKTGGTSVEAYLRAKGPVALHGTRADWSRCTPQHIHRELYAELAPPAFYDHGFAILRDPKARLISEFRMRVEPIRPKFRPLGWARMARNRAKGLPTHAVRIGRKVEFLDFDAWVERIFAAQRRDPYVKDNHIRPQVEFVDPAHRLFRLEAGLDPVFRWIDAVTGTPPAPGTFHERRSAWVDVPCSPGTEARIREFYAADYALIEELTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK2</accession>
    <name>A0A2M9PFK2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000129">
        <property type="protein sequence ID" value="PJN96326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="19"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="82"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="292" mass="31967" checksum="9AD337F896C5DDB2" modified="2018-04-25" version="1" fragment="single">RDCGRLVVTRRSDAGDDRTPVSTHFEIALAMLQAGKHVLVEKPMADSPEQAARLVEEAARRSRLLMVDHTFLYTGAVQAIRGMIDEGSLGEIYYYDSTRVNLGLFQRDVNVVWDLAAHDFAIMDFLLAARPVAISASAAGFLPGGPENMAHLSVYFEGGAMAHLNVNWFAPVKIRQTLIGGSRRMVIYDDMQTSEKVKVYDRGVSVGEAADPQTAYQQMISYRLGDMWAPALSAREALLSEVEAFARCIASGARPVNDGESGLRVVEMLTAASASIRQRGQPVEFRALEKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM9</accession>
    <name>A0A2M9PFM9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03000</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000118">
        <property type="protein sequence ID" value="PJN96360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="92"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="132"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="168"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="93"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="32882" checksum="A944ADD7220E6056" modified="2018-04-25" version="1">MASVTHRIVSSFVSLVALLVMVFFLSRLTGDPAALFLPLDATPQMIEQFRELHGLNDPLIVQFGHYVWDVLHLDFGESLRQSRPAIEVVMQAFAWTLQLALITVVLFTLAAIVIGSLAAFRPGGIFDRAASLLSLIGASAPDFWVAIVGITVFSIGLGWLPTSGTGSVWHWILPIAVLFIRPFGLILQVVRGSMVQAFGSAYVKTARAKGVRDRSIIFVHTLRNAMLPVITVVGDQAAALLNGAVVVETIFGFPGVGKLMIDSILNRDFNVILAAIMVTAVAIFIMNLVIDMAYALLDPRIRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN5</accession>
    <name>A0A2M9PFN5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000116">
        <property type="protein sequence ID" value="PJN96370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021719">
        <property type="entry name" value="Prot_inh_I78"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11720">
        <property type="entry name" value="Inhibitor_I78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7638" checksum="7BF6AA53B7035441" modified="2018-04-25" version="1">MRIRRPRPESSAAELQSLVGTSVGSLDPATLPEPRRVIFPGQAVTMDFRAERLNVEIGKDDRIARVFCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP6</accession>
    <name>A0A2M9PFP6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02900</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000113">
        <property type="protein sequence ID" value="PJN96380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009936">
        <property type="entry name" value="DUF1468"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07331">
        <property type="entry name" value="TctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="44"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="76"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="114"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="154"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="7"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="19144" checksum="04D28485324967F4" modified="2018-04-25" version="1">MPAGAAELHAREEHSHPFRDEGRMTTVGEVDAMEMRTDRVRWDVVAGAAIVALALVFLVVGARMSFGSLRHMGPGFVPVCAALMLIGLGGFIAWEGLRQEPTSADLPKLRAFAVVVACPIVFSAMIGWAGMVPTVIVTALLARAAEPLKWGWDLVLVPLGLVALAVGVFIEFVGVAIPIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR0</accession>
    <name>A0A2M9PFR0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000135">
        <property type="protein sequence ID" value="PJN96304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GCV_T" evidence="1">
        <location>
            <begin position="20"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="2">
        <location>
            <begin position="301"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="376" mass="41937" checksum="3AA143884F2D13FF" modified="2018-04-25" version="1" fragment="single">GRIPARENEWDGRHFWPVSNAEHLQLSEDCGIINLSHFHLTDIEGPDHVALMEWLCAAKIGGDANIGKGIYTHFLDDEGMVRADFTVIRMADRCRLINGADAGPRDFHYMRRVAQDKGFDVTITDVTEQYVTIGIWGPNARANLSKVVEDPAALAPENFPFAAIKPIRIAGRTVAAFRISYVGEQGWELHMAYDDGLAVWDALRSTGAIACGVETYANSRRLEKSLRLQNADLLTEYNLLEADLARPKVKEADFRGKAKHLEYRARAHQPAMLCTLVMVENVDRAGVARYPVGNLPVIDPETGETLVDELGRRSFTTSIAYGPTIGKNIALAYLPWAYCQEGRRLSVQYFGEIYPVEVVGVGYKPLYDPQNTKPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS8</accession>
    <name>A0A2M9PFS8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-hydroxyacid dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000130">
        <property type="protein sequence ID" value="PJN96324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6349" checksum="C233B5A94AC6CA5C" modified="2018-04-25" version="1" fragment="single">GLDVFAEEPKVPQALIDMPHVTLLPHIGSATIETRTAMGLLAADNLVAWFAGEPLPSRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG30</accession>
    <name>A0A2M9PG30_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lytic transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000081">
        <property type="protein sequence ID" value="PJN96496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045795">
        <property type="entry name" value="SLT_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19489">
        <property type="entry name" value="SLT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT_4" evidence="1">
        <location>
            <begin position="6"/>
            <end position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19489"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="22052" checksum="D2D6614D9F192551" modified="2018-04-25" version="1">MRLYALLASIVFVAACGGVEKPPSTTLDACRMKTERPHWFKAMKRTEQKWGVPVSVQLATISRESSFVGDARPTRKEKGFFFTREVPRSSAYGYAQAIDGTWDWYIRETGKRGADRDDFSDASDFIGWYMNTNQQMNGVSTRDAYNQYLAYHEGKAGFARGSYHKKPWLPPVARDVQAWALRYEQQLASCPIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG44</accession>
    <name>A0A2M9PG44_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Dihydropyrimidinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hydA</name>
        <name evidence="4" type="ORF">CNY89_02070</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="2">Carbamylation allows a single lysine to coordinate two divalent metal cations.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the metallo-dependent hydrolases superfamily. Hydantoinase/dihydropyrimidinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000076">
        <property type="protein sequence ID" value="PJN96513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01314">
        <property type="entry name" value="D-HYD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011778">
        <property type="entry name" value="Hydantoinase/dihydroPyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02033">
        <property type="entry name" value="D-hydantoinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amidohydro-rel" evidence="3">
        <location>
            <begin position="47"/>
            <end position="375"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="2">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="378"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR611778-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="378" mass="40725" checksum="F39C47CA16FFF3D3" modified="2018-04-25" version="1" fragment="single">MSKVIRGGTILTAERQFEADVLVEGEVIAAIGQGLRGDEEIDASGAYVIPGGIDPHVHLEMPFMGTSSTDDFYTGTVAAASGGTTTVVDFCIPPPDGSMLDAWADWVAKSKDKAVGDYAWHMCVTGWSERIFDEMAEVVGRGVNTFKHFMAYKGALMVDDDEMFASFSRCAALGALPLVHAENGDVVAALQQKLLAEGLTGPEGHAYSRPPEVEGEAANRAIMIADAAGCPLYIVHVSCEQAHEAIRRARQKGMRVYGEPLAQHLILDESEYLSKDWAHSARRVMSPPFRDKSHQASLWAGLAAGSLQVVATDHCAFTTEQKKAGLGDFTKIPNGTGGLEDRLAVLWTYGVETGRLTPEEFVAVTSTNSARILNMHPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG79</accession>
    <name>A0A2M9PG79_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Peptide chain release factor 2</fullName>
            <shortName evidence="4">RF-2</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">prfB</name>
        <name evidence="6" type="ORF">CNY89_01955</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="4">Methylated by PrmC. Methylation increases the termination efficiency of RF2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000071">
        <property type="protein sequence ID" value="PJN96539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00094">
        <property type="entry name" value="Rel_fac_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005139">
        <property type="entry name" value="PCRF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004374">
        <property type="entry name" value="PrfB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03462">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00937">
        <property type="entry name" value="PCRF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="SSF75620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00020">
        <property type="entry name" value="prfB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0488">Methylation</keyword>
    <keyword evidence="3 4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RF_PROK_I" evidence="5">
        <location>
            <begin position="243"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="modified residue" description="N5-methylglutamine" evidence="4">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="375" mass="41151" checksum="5F4FA27D2716CD28" modified="2018-04-25" version="1">MRAEIQTLVDEIEKSLALLRQRLDWETAPHRLEELDAMTEDPALWNDPARAQKLMRDRQNLADAVGGYRSLERELADQLELIEMGEAEGDAEIITEAETAIRALRDTAAAREIEALLDGEADGNDTFLEINAGAGGTESCDWAAMLARMYVRWAESHGCKVELMSESAGEEAGIRSAAYKISGKNAYGWLKTESGVHRLVRISPFDSAARRQTSFASVWVYPVVDDNVEIEVAPNDIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTSSEKSQHQNRANAMAALKSRLYEMEMRKRNEAINAAHEAKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDTGGVLDGDLDAFMAGALAQQVSGKSRAEAQAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG1</accession>
    <name>A0A2M9PGG1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000047">
        <property type="protein sequence ID" value="PJN96635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6471" checksum="9B83340E06E30413" modified="2018-04-25" version="1">MTQRHPISTPLSPSFSLRFAISSRVALAISVRLSLAGVSAPPAVPFWTSSALTMATVASTRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH8</accession>
    <name>A0A2M9PGH8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucose dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000044">
        <property type="protein sequence ID" value="PJN96649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012938">
        <property type="entry name" value="Glc/Sorbosone_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011041">
        <property type="entry name" value="Quinoprot_gluc/sorb_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07995">
        <property type="entry name" value="GSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50952">
        <property type="entry name" value="SSF50952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GSDH" evidence="1">
        <location>
            <begin position="3"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="33771" checksum="8B65D0F65E38C5E7" modified="2018-04-25" version="1" fragment="single">RVIRDGVLAPEPVAGMPPVLAQKQGGLLDVTVGPDFATDRTIYWTYSKPLPGGLSATAAARGRLSEDMTQVTGVEDILVQEPPAPEPMHYGSRILFDGEGLAHVTLGERSTLKNRVRAQDLGSTYGKVARITAEGEAPRDNPFVGREGALPTILSYGHRNIQGAAFRPGTGQLWTIEHGPKGGDELNLIEPGANYGWPVISYGINYDGSPVGKKITAAEGMEQPVYYWDPVIAPGGMAFYEGGMFPDWQGDLIVASLSPGALVRLEMEGDRVTGEERLLSDQGRIRDVAIAPDGSILAITDKADGALLRLTPKAAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS2</accession>
    <name>A0A2M9PGS2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00725</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000022">
        <property type="protein sequence ID" value="PJN96748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032503">
        <property type="entry name" value="FAO_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16350">
        <property type="entry name" value="FAO_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="2">
        <location>
            <begin position="10"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="domain" description="FAO_M" evidence="3">
        <location>
            <begin position="385"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="509"/>
            <end position="535"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF16350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="535" mass="58867" checksum="00C6AC72E92AAD59" modified="2018-04-25" version="1">MSAFPERAQVVIVGLGGIVGASIAHHLIERGWDDIVGIDKSGIPTDIGSTAHASDFCYATSHDALTCWTTTYSMDFFEKMGHYARIGGIEVARVGDDARMNEIRRRVDSGKAFGTRVRLMEPAEIKEKFPLIEEDLIQGGLWDPDAGLVIPRSQTVAGKLVDQGVAAGKLRAFANTPAKSLVIEDGRIKGVVTARGTILADHVIVCAGLWGRLIAEMAGEDLPVMPVDHPLTFFGPYDAFAGTGKEIGWPLLRDQGNSAYMRDTGDPRTAEGGQIEWGYYEETSPRLVHPRDLLEKEQARLSPSQRDLDMEQVLAPLERAMELTPILGELGYNEGHSFNGLLQTTTDGGPSMGESQKVRGLWYCVGIWVKDGPGMGKLIADWMTDGRTAIDHARIDYARFNPFQLTEKFIEERCTETAAKIYNPPVHPREPFTGGRGVRRSPFWERENELGGYFMELGGWERAHGYAANEHLLEKFAGRIPARENEWDGRHFWPVSNAEHLQLSEDCGISSRGAAGEPALTPGPGRSGTARTRQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ6</accession>
    <name>A0A2M9PGZ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Urea ABC transporter permease subunit UrtC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">urtC</name>
        <name evidence="7" type="ORF">CNY89_00475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000014">
        <property type="protein sequence ID" value="PJN96792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017778">
        <property type="entry name" value="ABC_transptr_urea_perm_UrtC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482:SF4">
        <property type="entry name" value="PTHR30482:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03408">
        <property type="entry name" value="urea_trans_UrtC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="66"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="204"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="253"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="292"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="329"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="373" mass="40177" checksum="48EF36237D7C3F89" modified="2018-04-25" version="1">MNEPLIDRRTGIFLAVLFLVTVLVPAGNLLAEPGGAAHVPSHIVSLLGKYLCYALLAVSLDLVWGYAGILSLGHGAFFALGGYAMGMHLMREIGARGAYANPVLPDFMVFLSYTELPWFWHGFDMFWFACLMVLFVPGLLAFVFGYFAFRSRVTGVYLSIITQALTYALLLAFFRNEMGFGGNNGLTDFRDVLGFSLSADTTRATLFALSGLALALGILVGRLIVTSKFGKVLTGVRDAESRTRFLGYRVEHYKLFVFTVSAMMAGVAGALYVPQVGIINPSEFSPANSIEIVIWVALGGRGMLIGGAVGALIVATLESWLTATLPDAWLYVLGAMFILVTIFLPRGVLGLIDTVAERRARPAAPAAVPNPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P476</accession>
    <name>A0A2M9P476_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004814">
        <property type="protein sequence ID" value="PJN92344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7557" checksum="0B8EA72E676F8BF1" modified="2018-04-25" version="1" fragment="single">MTVALDDLDRNILSLLQEDCTLPLDEIARRLGASKTPVWNRIRKLRAAGVIRAEVALLDPEKIGLDTC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G2</accession>
    <name>A0A2M9P4G2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004641">
        <property type="protein sequence ID" value="PJN92408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7555" checksum="0F1D79BE5E7EE190" modified="2018-04-25" version="1" fragment="single">GAAEKARWRKRPLAAPLRWLQSALTIGAGRASVRLPDQPGRGGEGEVEEAAVGRAVAVAPVGVDDRGRQGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H3</accession>
    <name>A0A2M9P4H3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_29900</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004610">
        <property type="protein sequence ID" value="PJN92418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7952" checksum="82E54918A298F68E" modified="2018-04-25" version="1" fragment="single">DRKAVAAKLREVYVAETAEAAWDALEAFDADWGGQYPSIAQAWRRAWQEVIPVLRLQSRDPAGDLHDERD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q5</accession>
    <name>A0A2M9P4Q5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">S-methyl-5-thioribose-1-phosphate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_28920</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the eIF-2B alpha/beta/delta subunits family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004237">
        <property type="protein sequence ID" value="PJN92526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10470">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000649">
        <property type="entry name" value="IF-2B-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042529">
        <property type="entry name" value="IF_2B-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01008">
        <property type="entry name" value="IF-2B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9186" checksum="5BB62DDC0249F927" modified="2018-04-25" version="1" fragment="single">RHRPRRRLQQDRHLSQGAGRPGLRRALPRRPALAHLMQRGQVDLVLVGRRVTAHGDVCNKIGTYLKALAARDCGVPFHVALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X8</accession>
    <name>A0A2M9P4X8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GLOBIN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_28525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004095">
        <property type="protein sequence ID" value="PJN92575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000971">
        <property type="entry name" value="Globin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01033">
        <property type="entry name" value="GLOBIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GLOBIN" evidence="2">
        <location>
            <begin position="3"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00238"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8335" checksum="32AD4B052368EF34" modified="2018-04-25" version="1">MTRDLAIRHVGYGVKDGDYAKAGDAVLATLAEVLKEEWSPELEAAWRSAYDRIATAMVEAAYPKTLAAGQAAMHGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X9</accession>
    <name>A0A2M9P4X9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase catalytic subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004089">
        <property type="protein sequence ID" value="PJN92580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3688" checksum="9BE2BD97F0F79AE4" modified="2018-04-25" version="1" fragment="single">RPHASLGYKPPAPAAISWPAAPPPAMATKPTMHRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z2</accession>
    <name>A0A2M9P4Z2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003957">
        <property type="protein sequence ID" value="PJN92621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9858" checksum="8611EE70CAC49F18" modified="2018-04-25" version="1" fragment="single">RLGNRRSASAKLLSPARRRRCIDHVRTKLDVSERLACRVLGQHRSTQRKTPKGRADEAALTADIVALATQYGRSGHRRIAAMLQAAGWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P545</accession>
    <name>A0A2M9P545_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003901">
        <property type="protein sequence ID" value="PJN92640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="9206" checksum="54C5E4C1765D9B59" modified="2018-04-25" version="1" fragment="single">EVRATDRDWQRKGWYGIIREEGFPDTRVSMILYPTIDADYLAASERVRADILVEWDDALEDRRIKRFHIIDVIERIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P560</accession>
    <name>A0A2M9P560_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27605</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003793">
        <property type="protein sequence ID" value="PJN92677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10066" checksum="82C429978AC5B671" modified="2018-04-25" version="1" fragment="single">CWWWSPPTWAPISSAGSAAAPGSGRRSARARPGLVYMALSMSFLTMLRDADGRGFPMVVWLVLVVVAADVGAYFVGRICGGPRLWPAVSPGKTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P561</accession>
    <name>A0A2M9P561_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003747">
        <property type="protein sequence ID" value="PJN92691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10462" checksum="8860BEADAD5B72AE" modified="2018-04-25" version="1" fragment="single">HARSQSDLLNHFKKDFDNQILYTTHSPFMVPTHALETIRTVSIAEDKGTTVTNDPTGDARTLFPIQAALGYDLAQSLFIGPNNLVVEGVTDYWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P572</accession>
    <name>A0A2M9P572_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27380</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003709">
        <property type="protein sequence ID" value="PJN92704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6316" checksum="AD299E522BC9B1EF" modified="2018-04-25" version="1" fragment="single">MPDLTQDPFSPKLSGGTGCGALDALQARDSRNEAGARGVMTAFQYRSTAFISGTFADMVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H8</accession>
    <name>A0A2M9P5H8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003535">
        <property type="protein sequence ID" value="PJN92768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11291" checksum="5E7A482ADEBAA1D7" modified="2018-04-25" version="1" fragment="single">VVHLVRHSLNFCSWKDRKAVAAKLREVYVAETAEAAWDALEAFDADWGGQYPSIARPGAGPGRRSSPFFAFSPEIRRVIYTTNAIESLNRIIRKAIKTRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R6</accession>
    <name>A0A2M9P5R6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Diacylglyceryl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003241">
        <property type="protein sequence ID" value="PJN92858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019660">
        <property type="entry name" value="Put_sensory_transdc_reg_YbjN"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10722">
        <property type="entry name" value="YbjN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="12066" checksum="30B046E42FCB8DA7" modified="2018-04-25" version="1" fragment="single">MAIVERDFNTEDLHPIDIVESLAEERSWDFDRIADDQIAMAIEGAWSTYSVTLAFSAREETLRLICAFEMAPPARRASAFHKLMALANDKCWSGAFVMWPDQKLLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y4</accession>
    <name>A0A2M9P5Y4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">COX2_CUA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003083">
        <property type="protein sequence ID" value="PJN92930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00116">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COX2_CUA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7132" checksum="9D8524A4A0D35C5C" modified="2018-04-25" version="1" fragment="single">VEDLTHGFSIINYGINMEVAPQATASVTFKADKPGVYWYYCSWFCHAMHMEMKGRMLVEPASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P600</accession>
    <name>A0A2M9P600_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sialidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002985">
        <property type="protein sequence ID" value="PJN92962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011040">
        <property type="entry name" value="Sialidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036278">
        <property type="entry name" value="Sialidase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13088">
        <property type="entry name" value="BNR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50939">
        <property type="entry name" value="SSF50939"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sialidase" evidence="1">
        <location>
            <begin position="35"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13035" checksum="94263DDE789D7468" modified="2018-04-25" version="1" fragment="single">PLGGARIAAFFRRRQADFVYRTESLDGGRSWSDSTGCVHMTLVPLGGARIAAFFRRRQADFVYRTESLDGGRSWSAPEPTDVPNNNSSIYATGGNAAIYYGLGVTEHSQGSTTVMAIANLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P639</accession>
    <name>A0A2M9P639_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20425</name>
        <name evidence="3" type="ORF">CNY89_24730</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002918">
        <property type="protein sequence ID" value="PJN92993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001824">
        <property type="protein sequence ID" value="PJN93492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039552">
        <property type="entry name" value="IS66_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13817">
        <property type="entry name" value="DDE_Tnp_IS66_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="2"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_IS66_C" evidence="2">
        <location>
            <begin position="47"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10471" checksum="5A2800D97C9003C6" modified="2018-04-25" version="1" fragment="single">QVFLEDGRVEMDTNPVENAIRPLTLQRKNSLFAGHDEGAANWARIASLIETCKMNAVDPFAYLAFVLKAIAAGHPQSRIDDLTPWAFAKTSSPNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B5</accession>
    <name>A0A2M9P6B5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002717">
        <property type="protein sequence ID" value="PJN93067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="2"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6612" checksum="80DBBE3F68005DFB" modified="2018-04-25" version="1" fragment="single">RTNGFVERFNGTVLDEFFRVKMRETFHDTVEALQADLDPWLVHYNTERPHLGYRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N6</accession>
    <name>A0A2M9P6N6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_22525</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002309">
        <property type="protein sequence ID" value="PJN93234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9593" checksum="4942AA27AB57A094" modified="2018-04-25" version="1" fragment="single">FPSQHRVKLHSTNPLERLNKEVKRRADVVGIFPNEDSIVRLIGAVLLEQNDEWQLQHRYMQIEGMVELDASAEASPSLIAEADAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P1</accession>
    <name>A0A2M9P6P1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(S)-ureidoglycine aminohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002409">
        <property type="protein sequence ID" value="PJN93179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd02211">
        <property type="entry name" value="cupin_UGlyAH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008579">
        <property type="entry name" value="UGlyAH_Cupin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044704">
        <property type="entry name" value="UGlyAH_cupin_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05899">
        <property type="entry name" value="Cupin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_3" evidence="1">
        <location>
            <begin position="51"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15886" checksum="1CA323B92236B995" modified="2018-04-25" version="1" fragment="single">MPGQNELLTGRAVFTESYAFIPRGVMTDIVTSGLPFWDRTRAWIIARPMTGFAETFSQYIMEVEPGGGSLRPDTEENVSSVLFTVEGEHLVTIGPETFLLTPGHFAFIPPGMTWSQRNHSGSRVVFHWIRKAYEPVEDLGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T5</accession>
    <name>A0A2M9P6T5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002243">
        <property type="protein sequence ID" value="PJN93261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="16"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6769" checksum="E0E1D561E4BC70B8" modified="2018-04-25" version="1" fragment="single">MAVDSVATAVGQSPKDDALLRVITDALPVGVAYVDQDKIYRFANQRFAAAYGFSPEEILGKHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Z5</accession>
    <name>A0A2M9P6Z5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002207">
        <property type="protein sequence ID" value="PJN93278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RIBORED_LARGE" evidence="1">
        <location>
            <begin position="7"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16870" checksum="B1B68FE93251AE2B" modified="2018-04-25" version="1" fragment="single">PRSGRAGARVKGTSSSASGPISYMHVFDQSCATVESAGARRGAQMGVLRCDHPDVMEFVGAKRQAGKLNNFNISVGVTDALMAAVEADGTFDLVHSAEPSAAQVAAGAHLRQDGMWVYATIQARELWRTIMRNTYEAAEPGVLFLDRINAENNLHYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P754</accession>
    <name>A0A2M9P754_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EH_Signature domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002028">
        <property type="protein sequence ID" value="PJN93367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028943">
        <property type="entry name" value="EH_Signature_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15611">
        <property type="entry name" value="EH_Signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EH_Signature" evidence="1">
        <location>
            <begin position="2"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF15611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="19639" checksum="A30018FCD123C89E" modified="2018-04-25" version="1" fragment="single">DALLSPWKDMSPDHDLKSYLTAKINALYGHPRIGRYKAVWNETSAAAQAIFQRWLTGENIRFFLDVVTTVEKSHMWEPRRKFWLGLHEQDRIREAWVAFHPEAERVARRRPVGSSLSFGKQVAGGSRGDTSLLILEFNDFIVVEGSHNYKVHVFDKHNVKTPKLRQSYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J6</accession>
    <name>A0A2M9P7J6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA recombination protein RmuC homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_20455</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in DNA recombination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RmuC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001830">
        <property type="protein sequence ID" value="PJN93489.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003798">
        <property type="entry name" value="DNA_recombination_RmuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30563">
        <property type="entry name" value="PTHR30563"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02646">
        <property type="entry name" value="RmuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="21"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93489.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="189" mass="20774" checksum="1AF990CAA8D860B7" modified="2018-04-25" version="1" fragment="single">RRTGETLGQSALRTARSLGDLQQRLETIDRAQSKIEKLSGQVLSLQDILSNKQTRGAFGEIQLRDIATKALPAGAAEFQATLSNGKRADCLIRLPAPPGPLVIDAKFPLEAYEALRAARTPAETQEAQRRMRAAVRTHMRAISEKYIIEGETAEGAMMFLPSEAVYAELHANFGELVREGFGLRVWIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K6</accession>
    <name>A0A2M9P7K6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_18455</name>
        <name evidence="7" type="ORF">CNY89_20085</name>
        <name evidence="6" type="ORF">CNY89_20090</name>
        <name evidence="5" type="ORF">CNY89_20115</name>
        <name evidence="4" type="ORF">CNY89_20140</name>
        <name evidence="3" type="ORF">CNY89_20840</name>
        <name evidence="2" type="ORF">CNY89_24705</name>
        <name evidence="1" type="ORF">CNY89_27625</name>
    </gene>
    <organism evidence="4 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003800">
        <property type="protein sequence ID" value="PJN92675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002911">
        <property type="protein sequence ID" value="PJN92995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001909">
        <property type="protein sequence ID" value="PJN93433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001769">
        <property type="protein sequence ID" value="PJN93531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001765">
        <property type="protein sequence ID" value="PJN93533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001760">
        <property type="protein sequence ID" value="PJN93538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001759">
        <property type="protein sequence ID" value="PJN93539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001461">
        <property type="protein sequence ID" value="PJN93779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="38" mass="4198" checksum="F240DDEED2069A19" modified="2018-04-25" version="1" fragment="single">MGDNTKDRLPPLLPDRYPAPDFFVCDLFDAAPKGDMAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L5</accession>
    <name>A0A2M9P7L5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001745">
        <property type="protein sequence ID" value="PJN93546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="17185" checksum="43E2E86F0165A7DA" modified="2018-04-25" version="1" fragment="single">SPRAVFLLVLPGKTLWLDGASQPIFQANALLGLQLTVDTALDYLRFFCFFVRSQGAPFYVVEDPGDPNLAELRRTRPELVESIARPASLETGVDGIFRARAAILFDNHCFRAAFDISPAGLVTMTDDDRLRPGWCVSSCRSAREEPDPDRAGPSDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V7</accession>
    <name>A0A2M9P7V7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Heme biosynthesis protein HemY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_19455</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001623">
        <property type="protein sequence ID" value="PJN93631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010817">
        <property type="entry name" value="HemY_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07219">
        <property type="entry name" value="HemY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="47"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="domain" description="HemY_N" evidence="5">
        <location>
            <begin position="30"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12770" checksum="F5F26FA27F9268FB" modified="2018-04-25" version="1" fragment="single">MLWSLLKIVVFLAVAAALAWGFGHLIEADGRVTIALGAREFALTPIGFILALVALVIAALVLLQVVGFIVALIRFVLGDETAFTRFFSRHRERRGLDALTGSMLALARRSAQSHAQGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P800</accession>
    <name>A0A2M9P800_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TraG-D_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001573">
        <property type="protein sequence ID" value="PJN93672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032689">
        <property type="entry name" value="TraG-D_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12696">
        <property type="entry name" value="TraG-D_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TraG-D_C" evidence="1">
        <location>
            <begin position="5"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12661" checksum="E400A85F60DA5025" modified="2018-04-25" version="1" fragment="single">GLPLGRSYGLHAWPFCQNWAQLVDIYGESGAESFLASCDAFCVYGLDDPRTPQLVSDFIGRITPSELGGFQTVKYGDRSPLQPPVIPQPSLAQRRALAAGREASAVGQTGSLDHVRAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B1</accession>
    <name>A0A2M9P8B1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B</fullName>
            <ecNumber evidence="6">6.3.5.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gatB</name>
        <name evidence="6" type="ORF">CNY89_18440</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01001458">
        <property type="protein sequence ID" value="PJN93782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016884">
        <property type="term" value="F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017959">
        <property type="entry name" value="Asn/Gln-tRNA_amidoTrfase_suB/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018027">
        <property type="entry name" value="Asn/Gln_amidotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659">
        <property type="entry name" value="PTHR11659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02637">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00845">
        <property type="entry name" value="GatB_Yqey"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GatB_Yqey" evidence="5">
        <location>
            <begin position="1"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="14406" checksum="CB4A3CE7CE7AE8DC" modified="2018-04-25" version="1" fragment="single">DGKQAANWVINELFGRLNKEGRGIETSPIAPGQLGGLIDLIGSGEISGKIAKDVFEILWTEGGDPAGIVESRGLRQVTDMGAIEKAVDEIVAANPAKVEQARAKPSMAGWFVGQVMKATGGKANPQAVNELVKAKLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E8</accession>
    <name>A0A2M9P8E8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Dihydrofolate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001427">
        <property type="protein sequence ID" value="PJN93815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5335" checksum="874E083B8094E6A2" modified="2018-04-25" version="1" fragment="single">MKPELLLVEPMTPAIEARLDEAYTVIRLFAPEGRAAAEAARPSIRAVVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K5</accession>
    <name>A0A2M9P8K5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Epimerase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001382">
        <property type="protein sequence ID" value="PJN93877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="16317" checksum="A5F3D958E234C95E" modified="2018-04-25" version="1">MLFASAILEGRPIKLYNEGRHSRDFTFIDDIVEGVIRASDRIAEPDPDWDPREPDPATSSAPFRLYNIGNSAPVQLLDFIEALEVSLGRKAERVLMPLQPGDALDTYADSDRLARRINWRPATPVAEGVARFAGWYQDYAARRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q8</accession>
    <name>A0A2M9P8Q8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exopolyphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001342">
        <property type="protein sequence ID" value="PJN93917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="1">
        <location>
            <begin position="15"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="292" mass="32370" checksum="FC9180969AD88A4A" modified="2018-04-25" version="1" fragment="single">PLLTEPVFYAIGGGWRALARVHIALNAAPISVVHGYEAECEDLRAFAKKISRMTPAEIAALPDVPSRRIDTLPAAAFVLYRLLRKLRPERVVFSVFGLREGWLYGQLDPEEQYRDPLLEGAQSIGLPTARVPEFSAALGRWTDGLFPGEIQSDRRLRLTVCALTDMAWRDHEKVRAIESFRRLLQFPFIGVTHSERAFVAVAILARYGGAIDAAVRASIGDLLTASQLRRAEILGRALLLGHRFSASVPEILDQARLRIGASAVRLEILNSEHVPDVDAVQTRLRQLARVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T5</accession>
    <name>A0A2M9P8T5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ISL3 family transposase ISMex26</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001313">
        <property type="protein sequence ID" value="PJN93953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002560">
        <property type="entry name" value="Transposase_DDE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01610">
        <property type="entry name" value="DDE_Tnp_ISL3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_ISL3" evidence="1">
        <location>
            <begin position="106"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16745" checksum="62391E038D07F8B3" modified="2018-04-25" version="1" fragment="single">MRTLSDLPISGAIVKLRLSVRRFRCKQRACQRKTFSEALAPGIGRRHGRRVARCDELVHAVGLALGGRPGSRMLARLAAPWSKDTFLRAVRREAAAASSAPAATVIGIDDFAWRRGHSYGSIIVDLERRTVIDILPNRQRDRQCPIFCVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P903</accession>
    <name>A0A2M9P903_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16950</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001259">
        <property type="protein sequence ID" value="PJN94026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009216">
        <property type="entry name" value="Virulence_factor_SrfB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07520">
        <property type="entry name" value="SrfB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17620" checksum="E150BD70B184C782" modified="2018-04-25" version="1" fragment="single">MLKPIIEFKPTETVTLIPNSGVQFLDFGFDRAAARKLSRAFAFVRDPGPGDTVSIHPLEPGPDDALVYVRPGETARITAHEDQIYSMNPDNALDRLDRLWLPFPFFRRSGSGFDDGPTTWARIKVVRLDAPDAAGRTHRAISPRICAPDGDLAQAQYGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P960</accession>
    <name>A0A2M9P960_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001212">
        <property type="protein sequence ID" value="PJN94088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="14145" checksum="8938C608E6F4D0EB" modified="2018-04-25" version="1">MQRAEWKAFHHSIRHDARAFRESHGGFPCFTRRLVHNGEEWSFTRARNDGRGWTSHLRKSLIRERGWREHHASEMNDLPHWHRKLRREPWTRTACRRAIRTAVRCAREWRLAGQGEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P962</accession>
    <name>A0A2M9P962_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001231">
        <property type="protein sequence ID" value="PJN94060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7525" checksum="8BF3750B31CAEDCD" modified="2018-04-25" version="1">MTAEILLVCLSLAVAVIAAGLSALILAAFGPAGWLVIAALAVTGVLVCRFASARLAASQSWLRDDLRDDWKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P993</accession>
    <name>A0A2M9P993_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PepSY domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001189">
        <property type="protein sequence ID" value="PJN94117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025711">
        <property type="entry name" value="PepSY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13670">
        <property type="entry name" value="PepSY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014961536" evidence="1">
        <location>
            <begin position="21"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="domain" description="PepSY" evidence="2">
        <location>
            <begin position="5"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9192" checksum="5402A56B646E4A68" modified="2018-04-25" version="1">MNRILLAALPLAVLAAPALAGPDCKGMAQSKPMWEVARGFEEAGGKIREMKVSDGCYEIYGTNGQQKLEIYYDPSSGAELEREAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A9</accession>
    <name>A0A2M9P9A9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001181">
        <property type="protein sequence ID" value="PJN94128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="15652" checksum="17CF11A0A3DBB596" modified="2018-04-25" version="1">MTMSVSTQDTSDETATSAHTKWVIALFFVSIFIPGAFNVGFSLNPYRIFLIVAAFPTLRQIVRDPTLRLTGVDVLVFLGIAWRSLAVLVNNGADGAVFSIALMIDLGSAMRSAGRSFGKLRTSAFSSDASCCCCWPSCRSPSWSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B6</accession>
    <name>A0A2M9P9B6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001186">
        <property type="protein sequence ID" value="PJN94121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13240" checksum="386C85FD4B400D85" modified="2018-04-25" version="1">MLFALLPGAWFSCLGNLNESVVLGSNRPDLNAAANLARMAAILLGLPTGYWLAGLPGAIAAIVAGEVMRYLALAVLQTRLGVSFWRQDGLGTLVFVAVAAAWIALRTRIGGDLPWIGFLTAWSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F6</accession>
    <name>A0A2M9P9F6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">DUF3772 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_16050</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001147">
        <property type="protein sequence ID" value="PJN94178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="97"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="127"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="34642" checksum="BED36C73F64C11B7" modified="2018-04-25" version="1" fragment="single">MGLAREGLMPVAVVSLIGLLCLPALALIWGARISDIAGVWYLVRDGVTYGGMRISLGMVTTFALVFGLLYGATRVVQSILRNTVLPRTRMDAGGKNALTTGVGYIGFMIAAVAAVSSTGLDLSSLAFVAGALSVGIGFGMQNVVSNFVSGIILLVERPIKEGDWIEVGGFAGYVRRISVRSTVVETFDRASVILPNTDLIAGTVLNRTHSGLSGRLQVPVAVALDTDPRQVERLLLEIAENYPLSLNEPSPRVLLMEIGPDAFLFEIRCWLRDVNFSLSAKSDMNFEILERFAAEGIRLQPYGREAWTSARHMPAPPPGPAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I3</accession>
    <name>A0A2M9P9I3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001144">
        <property type="protein sequence ID" value="PJN94182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6656" checksum="3E7493AE76630949" modified="2018-04-25" version="1" fragment="single">DRFAATKRIQLRRRGADGQEQIFVFNYKAVERGAAIESMITMREGDVILVPERRLFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S3</accession>
    <name>A0A2M9P9S3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Arsenate reductase</fullName>
            <ecNumber evidence="3">1.20.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">arsC</name>
        <name evidence="4" type="ORF">CNY89_15440</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>[glutaredoxin]-dithiol + arsenate + glutathione + H(+) = arsenite + glutathionyl-S-S-[glutaredoxin] + H2O</text>
            <dbReference type="Rhea" id="RHEA:22016"/>
            <dbReference type="Rhea" id="RHEA-COMP:10729"/>
            <dbReference type="Rhea" id="RHEA-COMP:17668"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29242"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:48597"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:146199"/>
            <dbReference type="EC" id="1.20.4.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2 3">Belongs to the ArsC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.20.4.1" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001074">
        <property type="protein sequence ID" value="PJN94280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008794">
        <property type="term" value="F:arsenate reductase (glutaredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03034">
        <property type="entry name" value="ArsC_ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006659">
        <property type="entry name" value="Arsenate_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006660">
        <property type="entry name" value="Arsenate_reductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30041">
        <property type="entry name" value="PTHR30041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03960">
        <property type="entry name" value="ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00014">
        <property type="entry name" value="arsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51353">
        <property type="entry name" value="ARSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15264" checksum="F00118E92EF368A3" modified="2018-04-25" version="1">MSVKIYHNPTCGTSRNVLAMIRASGEEPEVIEYLQAPPSRERLAALIAAAGLTVRAAMRQKGTPYAELGLDDPHLSDDQLLDAMQAHPILINRPFVETPKGVRLARPSEVVLEILPNPDIGTFRKEDGELVRHDGPRHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S4</accession>
    <name>A0A2M9P9S4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15370</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TrbL/VirB6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001064">
        <property type="protein sequence ID" value="PJN94293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030255">
        <property type="term" value="P:protein secretion by the type IV secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007688">
        <property type="entry name" value="Conjugal_tfr_TrbL/VirB6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04610">
        <property type="entry name" value="TrbL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="48"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="79"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="11804" checksum="0F2DB9A9C1552269" modified="2018-04-25" version="1" fragment="single">MVTSIFDFSDRAADESGFFSISLLSIVLAIVGALMACVAILVAGIAKIGLAMAVSLAPLFIASLLFRGTSDLFTSWAKFTLGFAMIPMVLAGVMGAIVGIGGTLIDQIENAATLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U9</accession>
    <name>A0A2M9P9U9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001050">
        <property type="protein sequence ID" value="PJN94318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14634" checksum="513ABD145F8682FF" modified="2018-04-25" version="1">MDDKNDVEPGATEASAPLTRAPHAGGGGAEAGHGKRFSAKRKLAAVQRLLRGESLEAQSRELNVPAHRLSDWRDRVLIAAESALKERERDARDDDIERLKAKVGEITMANELVYSKIDRLEAGRPLAGRRSRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W5</accession>
    <name>A0A2M9P9W5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001046">
        <property type="protein sequence ID" value="PJN94326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014967968" evidence="1">
        <location>
            <begin position="20"/>
            <end position="324"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="324" mass="35084" checksum="E30156ECBA6DAF1C" modified="2018-04-25" version="1">MRYVITLALSLAAPFAALADPLPSWNPTATEAAIIDFVSRVTDPDSADFVPEEDRIAVFDNDGTLWSEQPMYFQGLFALDRLREKAKSDPSILTSDALRAANAGDMQAVMASGRQGLVEIVDVSHAGLSVDAFKGEAHDWLTTAKHPTTGLPYAAMTFQPMLELLVYLRDKGFRTYIVSGGGIDFMRSISAQAYGIPPWQVIGSEGATRYDDTGAAPALMKDGGVSFVDDKAGKPVGIDRFIGQRPIFAAGNSDGDFQMLEYVTSGEGPRFGMILHHTDAAREFAYDRDSSVGRLSEALDAAPDRGWTVVDMAADWDRVWTGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y3</accession>
    <name>A0A2M9P9Y3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001036">
        <property type="protein sequence ID" value="PJN94343.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94343.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6852" checksum="0FB7455302B748C6" modified="2018-04-25" version="1" fragment="single">PCGSSRSTPPAAALWAAVFVSAGYWLGHGIEALFGRIEPLERLLFPALAAALLLGLVLWLVGHAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA38</accession>
    <name>A0A2M9PA38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sodium:proton antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001009">
        <property type="protein sequence ID" value="PJN94392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="1">
        <location>
            <begin position="5"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6771" checksum="741B90508D4B7EF5" modified="2018-04-25" version="1" fragment="single">MTVTRDDVLKALRRVALPEGGDLVGADLVRALAVEGAVVRFVIEVSPEKGRAYEAGPRRRPGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA52</accession>
    <name>A0A2M9PA52_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14595</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DoxX family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000988">
        <property type="protein sequence ID" value="PJN94425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032808">
        <property type="entry name" value="DoxX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07681">
        <property type="entry name" value="DoxX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6056" checksum="430FFA5379A05B59" modified="2018-04-25" version="1" fragment="single">MTNLASLAALIGRVLIAYVFVSAGLAKLGDIPGAMAYTASGGLPGVFAIPALALEILGGLAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA66</accession>
    <name>A0A2M9PA66_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000984">
        <property type="protein sequence ID" value="PJN94430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="21"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6704" checksum="71C71603496A89C3" modified="2018-04-25" version="1" fragment="single">MTETIALSGVTKRYGPIIAVRDLDLTLDAGEVVALVGHNGAGKTTQIKMMLGLARPTAGAVRLLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA1</accession>
    <name>A0A2M9PAA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Addiction module antitoxin RelB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000957">
        <property type="protein sequence ID" value="PJN94468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014056">
        <property type="entry name" value="Addiction_killer_pred"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41791">
        <property type="entry name" value="PTHR41791"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028744">
        <property type="entry name" value="Addict_mod_HI1419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02683">
        <property type="entry name" value="upstrm_HI1419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10695" checksum="6B0BA27FEB0443C2" modified="2018-04-25" version="1">MIEVSQTATFKKWLESLRDRTASYRIATRIARVQAGLLGDAKFFDGIGELRIDYGPGYRLYFVQRGPVVIILLCGGDKSTQSKDIRKAKELAKEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE1</accession>
    <name>A0A2M9PAE1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000935">
        <property type="protein sequence ID" value="PJN94510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="16428" checksum="E9E8A9B385A11C19" modified="2018-04-25" version="1">MAIVLPSAIGGVELEIAACDMAVAAEGTRFGVNGVNIGLFCSTPMVALTRAVPRKAAFEMLTTGRLIEADEARGFGLINRIAAPDQLAQETRALAETVAAKLGVAVTIGKGVFYDQAELGLEAAYALAGEAMVTNMLDPDTAEGVSAFLDKRKPAWAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ9</accession>
    <name>A0A2M9PAJ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13755</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000904">
        <property type="protein sequence ID" value="PJN94567.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94567.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8939" checksum="154842922526E8CE" modified="2018-04-25" version="1">MVAPAWVAPNLAQRGAALPIFLLLQQVKLPKRLDLARDADRASDSQLDGRQGGLIAALRCLPVFPVRARSPLRPRGYPWIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN0</accession>
    <name>A0A2M9PAN0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000885">
        <property type="protein sequence ID" value="PJN94594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7550" checksum="3EF864EFE752816C" modified="2018-04-25" version="1">MRQSRLMSLVEAAANVIVGYGVAVLTQIAVFPLFGLSATISQNLAIGAVFTGVSLARSYLLRRLFEALRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP4</accession>
    <name>A0A2M9PAP4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome-c oxidase, cbb3-type subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ccoO</name>
        <name evidence="7" type="ORF">CNY89_13530</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000880">
        <property type="protein sequence ID" value="PJN94605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003468">
        <property type="entry name" value="Cyt_c_oxidase_monohaem-su/FixO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02433">
        <property type="entry name" value="FixO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00781">
        <property type="entry name" value="ccoO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="31"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="70"/>
            <end position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="258" mass="28966" checksum="974A5E39472975E0" modified="2018-04-25" version="1">MADDKKTPAHGAGTKSGWFVRNHQFVERNAFLLLVLSFIVVTIGGLVQIVPLFYLDNTIEKVEGVRPYSPLETRGREIYVREGCYVCHSQMIRTMRDEQERYGHYSLAAESMYDRPFQWGSKRTGPDLARVGGRYSDAWHVAHFHNPRDLVPESIMPAYSWFAHTPVTAAGIADSLKVQQLMGVPYTDEMIASVQADFRTQADPDSGDVEALLARYPKAVARNFDGQPGISELDAVIAYLQMLGTLVDFSTYTPEPSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR1</accession>
    <name>A0A2M9PAR1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RraB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000864">
        <property type="protein sequence ID" value="PJN94628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036701">
        <property type="entry name" value="RraB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009671">
        <property type="entry name" value="RraB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06877">
        <property type="entry name" value="RraB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89946">
        <property type="entry name" value="SSF89946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RraB" evidence="1">
        <location>
            <begin position="9"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06877"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="12017" checksum="F8FF74230F9B3CFB" modified="2018-04-25" version="1">MTHDYDGQRQETFDTFAEAGPGLPRSAVVDFIFFVEETDADWAAFERALRAKGFATRRLDDDETLVASYGPMPVTPEAIWAQERLATEIALKHDFYPDGWDLDENA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW6</accession>
    <name>A0A2M9PAW6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">O-acetylhomoserine aminocarboxypropyltransferase</fullName>
            <ecNumber evidence="5">2.5.1.49</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13080</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the trans-sulfuration enzymes family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.49" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000835">
        <property type="protein sequence ID" value="PJN94678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003961">
        <property type="term" value="F:O-acetylhomoserine aminocarboxypropyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019346">
        <property type="term" value="P:transsulfuration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00614">
        <property type="entry name" value="CGS_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000277">
        <property type="entry name" value="Cys/Met-Metab_PyrdxlP-dep_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006235">
        <property type="entry name" value="OAc-hSer/O-AcSer_sulfhydrylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01053">
        <property type="entry name" value="Cys_Met_Meta_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001434">
        <property type="entry name" value="CGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01326">
        <property type="entry name" value="OAH_OAS_sulfhy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="3">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001434-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="426" mass="45269" checksum="53CCCDC40709A168" modified="2018-04-25" version="1">MAHGFDTLQIHAGARPDPATGARQTPIYQTTAYVFRDADHAAALFNLQEVGYIYSRLTNPTVSVLQERIATLEGGVGAVCCSSGHAAQIMALLPLMGPGTNVVASTRLYGGTYTQFTHTIRRFGWSAKFVDFDDLDALRAAIDEGTRAVFCESISNPGGYVTDIPAAAEIAHAAGVPLIVDNTSASPWLCRPFEMGADLVVHSTTKYLTGNGTVTGGAVVDSGRFDWSASDKFPSLSAPEPAYHGLTFHETFGPMAFTFHGIAVGLRDLGMTMSPTTAFQTLLGIETLSLRMERHVSNARQVAAWLEAHPAVAQVTYAGLPSSPYAERVARLYPRGAGALFTFALKGGYEACVRLVDAVELFSHVANLGDTRSLIIHSASTTHRQLTPEQQTAAGAGPDVVRLSIGIEDVADIIADLDQALARATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX2</accession>
    <name>A0A2M9PAX2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_13005</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000828">
        <property type="protein sequence ID" value="PJN94688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="173" mass="18824" checksum="C997A84A361B7DE1" modified="2018-04-25" version="1" fragment="single">RGVPILVLLLYVAFVGVPLGVAGWNALAVRLGLEPLLTRDVSMLARAVIALALAYSAFLAEIFRAGIQAVDPGQLEAAKSLGLPRWPRFRFVVLPQAIRIVLPPLGNDFVALVKDSALVSVLGVMDVTQLGKLHAASSFRYMETYNVVAFAYLVMTIGLSLALRALEKRLRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB96</accession>
    <name>A0A2M9PB96_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cobyrinic acid a,c-diamide synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000760">
        <property type="protein sequence ID" value="PJN94807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="12"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22700" checksum="F76783E3522F43AB" modified="2018-04-25" version="1">MTIIKRGSMKTIAIIGQKGGTGKTTLAEILLVAFELDGFTAIGMDLDPQTSLCSWADAREAESPAVLPVPHSRLSQTLDTAKAEGVQVCIIDTAGRAEQAALKAAQAADVVILPLQPTSADLVTAEATKAIIDMAKAPANFAVLMRVKAQGTRHIEAAEFLKSHGIETCPATIGERVSYQDAAAAGMTPQETEPGSRAADECQKVYVFTRQHLNI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC4</accession>
    <name>A0A2M9PBC4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein ParA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000740">
        <property type="protein sequence ID" value="PJN94837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="17"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="21948" checksum="5CE26D946D1DFA31" modified="2018-04-25" version="1" fragment="single">YRHVNPEWSFFAAVSRYLDALPDDAYDLIIFDCPPAIGYQSMNAVFAADVLYIPSGPGYWEYDSTTSFIGQLAEALEDLSAGFGETFPTGKIRLPKAFADVKFLLTRFEASNDLHQAMLGAFRKVFGDRVAAHPIEMTRAVEQSGRFLCSIYEIDYRDMTRETWRRARGSFDTAYEEFKQVCVAAWDKVEEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR3</accession>
    <name>A0A2M9PBR3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">KpsF/GutQ family sugar-phosphate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_11390</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the SIS family. GutQ/KpsF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000679">
        <property type="protein sequence ID" value="PJN94949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05014">
        <property type="entry name" value="SIS_Kpsf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004800">
        <property type="entry name" value="KdsD/KpsF-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035474">
        <property type="entry name" value="SIS_Kpsf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004692">
        <property type="entry name" value="KdsD_KpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00393">
        <property type="entry name" value="kpsF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0129">CBS domain</keyword>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="SIS" evidence="7">
        <location>
            <begin position="35"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="203"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="267"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="site" description="Catalytically relevant" evidence="4">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR004692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR004692-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR004692-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="321" mass="33489" checksum="486612451F4006AF" modified="2018-04-25" version="1">MTPTALRTDLCRVVGTEADALAKLAEGLDGGFAKVAELLLSARGRVIVSGMGKSGHIARKIAATFASTGTPAMFVHPAEASHGDLGMITRQDVVILISNSGETPELADMIAYTRRFAIPLVAIAARRDSTLARQSDLALILPAAPEACSVGLAPTTSTTMTLALGDALAVALMESRDFSPADFREFHPGGRLGARLVMVGQLMHKGADLPLVEECTPMSETLLEMSQKGFGVVGVTDAAGLLLGIVTDGDLRRNMAGLLDRRAGEVMTRNPRTVSTGALASEALGIMNDRKITTLFAVDPADPGRPAGVLHVHDCLRAGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR6</accession>
    <name>A0A2M9PBR6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">COX3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_11150</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the cytochrome c oxidase subunit 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000661">
        <property type="protein sequence ID" value="PJN94987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024791">
        <property type="entry name" value="Cyt_c/ubiquinol_Oxase_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000298">
        <property type="entry name" value="Cyt_c_oxidase-like_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035973">
        <property type="entry name" value="Cyt_c_oxidase_su3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11403">
        <property type="entry name" value="PTHR11403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00510">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81452">
        <property type="entry name" value="SSF81452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50253">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="16"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="42"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="106"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="domain" description="COX3" evidence="9">
        <location>
            <begin position="5"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="152"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="159"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22586" checksum="363B97E94786FBC4" modified="2018-04-25" version="1">MAGRVNHDYHILPPSIWPFTGAVGAFVMLLGAVLFFHDSGPWVMLMGLMLVLYTMYSWWADVISESQAGQRAARDQAAADRSAPGRFGLAALATRGSRRLRLRFRLGGLGGLGGFGPAALAGLRTFLRLRRPIGFRGFRRLFRAGGLARVGGVGRGSRQVRHADVHRGDQGESRRRDRDAPEKPHDKTPLPQPEYGWSPRQSSRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU3</accession>
    <name>A0A2M9PBU3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peripla_BP_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000651">
        <property type="protein sequence ID" value="PJN95008.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_3" evidence="1">
        <location>
            <begin position="40"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95008.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="22853" checksum="34D8EB6CD913DCE4" modified="2018-04-25" version="1">MPGSLSDRERHALRGAWPHQRAGALSLFRHRQSPGGYRSARHLVARGHRHIALINGLAHFSFAIERLEGYRAALAEAGLSYRPDLVRHDRMTEALGLVSTIQFFSGEAPFPTGILCGNTLIAKGVYKALEMLGRRVPQDVSVIAHDDVLPDAASPVFRPELTLTRSSIQDSWAPLAEFLADAIAGKPVETQQRIAGFDFVEGQSVAAIPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX8</accession>
    <name>A0A2M9PBX8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">C4-dicarboxylate transporter DctA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_11010</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000648">
        <property type="protein sequence ID" value="PJN95014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046942">
        <property type="term" value="P:carboxylic acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018107">
        <property type="entry name" value="Na-dicarboxylate_symporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00713">
        <property type="entry name" value="NA_DICARBOXYL_SYMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00714">
        <property type="entry name" value="NA_DICARBOXYL_SYMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0769">Symport</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="59"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="89"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="162"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="200"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="231"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="319"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="358"/>
            <end position="385"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="405" mass="42508" checksum="F4DA86A635473789" modified="2018-04-25" version="1">MHFPTQASGEALAPKPFYRQLYVQVLTAIVLGITVGHFWPEIGASLKPLGDSFVKLVKMIIAPVIFLTVTTGIAGMSDLKKVGRVAGKAMIYFLTFSTLALIVGLIVGNFIQPGAGLNIDPASLDGSAVADYAAKAHDSTLIGFLQGIIPATVVGAFADGNILQVLFFSILFGISLAAVGERGKPVLDFMQSLTNPIFKLVEILMKAAPIGAFGAMAFTIGKYGIASVINLAMLVGTFYLTALIFVVVVLGAVSWWNGFSIFKLCRYLKEELLLVLGTSSSEAALPSLMEKLEKAGAKRSVVGLVVPTGYSFNLDGTNIYMTLAALFIAQAVNIDLSLSDQIILLLVAMLSSKGAAGITGAGFITLAATLSVVPAVPVAGMALILGVDRFMSEVRALTNAIRPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ2</accession>
    <name>A0A2M9PBZ2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 7">S-formylglutathione hydrolase</fullName>
            <ecNumber evidence="3 7">3.1.2.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">fghA</name>
        <name evidence="8" type="ORF">CNY89_10720</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Serine hydrolase involved in the detoxification of formaldehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>H2O + S-formylglutathione = formate + glutathione + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14961"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:57688"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="EC" id="3.1.2.12"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the esterase D family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.2.12" evidence="3 7"/>
    <dbReference type="EMBL" id="PHNO01000625">
        <property type="protein sequence ID" value="PJN95061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052689">
        <property type="term" value="F:carboxylic ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018738">
        <property type="term" value="F:S-formylglutathione hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046294">
        <property type="term" value="P:formaldehyde catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000801">
        <property type="entry name" value="Esterase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014186">
        <property type="entry name" value="S-formylglutathione_hydrol"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10061">
        <property type="entry name" value="PTHR10061"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00756">
        <property type="entry name" value="Esterase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02821">
        <property type="entry name" value="fghA_ester_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0719">Serine esterase</keyword>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <feature type="active site" description="Charge relay system" evidence="6">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005622"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR614186-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU363068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="30639" checksum="2CCFBA5689F3224B" modified="2018-04-25" version="1">MKTIAENASFDGMQGVYSHASDVCGCDMTFAVYLPPQARAGKVPVLWYLSGLTCTHENAMTKAGAQAWAAEEGIAVVFPDTSPRGDDIANDPAYDLGQGAGFYVNATETPWAPHFRMWDYVAQELPDLIFAELPLDRDRQGITGHSMGGHGALTLAMTLPETYRSLSAISPIANPSRSDWGRKQLGAYLGPDEAAWAAHDATLLMAERGYPGSMLIDQGAKDQFLDLLKPEALVAAAAARRQPFEFRMIEGYDHSYFYVASVMEDHVRWHAERLHAKDPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC59</accession>
    <name>A0A2M9PC59_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GNAT family N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000610">
        <property type="protein sequence ID" value="PJN95092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8119" checksum="96FD3AA8E4EDE7CA" modified="2018-04-25" version="1" fragment="single">MPIQNEAPDDVAAIGRLVAEALRPLAQSTGTEARIVERLRAEGALALSLVAEERGEIVGYLAASPARIGPQDGWGLIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC60</accession>
    <name>A0A2M9PC60_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_10260</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000586">
        <property type="protein sequence ID" value="PJN95137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040582">
        <property type="entry name" value="OB_MalK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17912">
        <property type="entry name" value="OB_MalK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="3"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="34357" checksum="30FE8B3ED073F88B" modified="2018-04-25" version="1" fragment="single">ISIGEKVVNNLAPGERGIAMVFQNYALYPHMKVRKNLSFGLRLNGTKKDEIERRVADVAETLEIGPLLDRLPKQLSGGQAQRVALGRALIKSPDVFLFDEPLSNLDAKLRASMRVRITELHRRLKSEGRSSTVVYVTHDQVEAMTMGDRICVMKEGHIMQVADPVTLYDKPANLFVAGFIGMPEMNLVPAELHRSDAGPVLRFGDQAVRLGTEMTRRLDPATGRDVTFGIRPQHLRLARADEADALTAQVTKADFLGHEVDAHVTIGGHRFTVVLPVEAFRIASEGGTIRVLPEEGRAHVFDTATGRNVSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC92</accession>
    <name>A0A2M9PC92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sulfate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10240</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000584">
        <property type="protein sequence ID" value="PJN95143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfate_transp" evidence="6">
        <location>
            <begin position="24"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8132" checksum="6BA6222BA6DA67D3" modified="2018-04-25" version="1" fragment="single">MSPSRTPGRWPILPSLAGYDPAWLKTDVPAGLAIAAVGIPSAIAYPAIAGLPPETGLYASIFPLIAYALFGPSRQLVVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE9</accession>
    <name>A0A2M9PCE9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HPr family phosphocarrier protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000549">
        <property type="protein sequence ID" value="PJN95216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00367">
        <property type="entry name" value="PTS-HPr_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000032">
        <property type="entry name" value="HPr-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035895">
        <property type="entry name" value="HPr-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001020">
        <property type="entry name" value="PTS_HPr_His_P_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00381">
        <property type="entry name" value="PTS-HPr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00107">
        <property type="entry name" value="PHOSPHOCPHPR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55594">
        <property type="entry name" value="SSF55594"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01003">
        <property type="entry name" value="PTS_HPr_family"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51350">
        <property type="entry name" value="PTS_HPR_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00369">
        <property type="entry name" value="PTS_HPR_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HPr" evidence="1">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9249" checksum="58236781EFBED6B7" modified="2018-04-25" version="1" fragment="single">MNLVLEIVNDKGLHARASAKFVETVERFDARARVSRDGMEVSGDSIMGLMMLAAAKGTSIEVQVEGAEAAPLAEALSALVSGRFGEPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF9</accession>
    <name>A0A2M9PCF9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA-binding transcriptional accessory protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09725</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000543">
        <property type="protein sequence ID" value="PJN95226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004518">
        <property type="term" value="F:nuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd05685">
        <property type="entry name" value="S1_Tex"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041692">
        <property type="entry name" value="HHH_9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044146">
        <property type="entry name" value="S1_Tex"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032639">
        <property type="entry name" value="Tex_YqgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037027">
        <property type="entry name" value="YqgF/RNaseH-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17674">
        <property type="entry name" value="HHH_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16921">
        <property type="entry name" value="Tex_YqgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="3">
        <location>
            <begin position="294"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="358"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="391" mass="41759" checksum="81A2F7F5575D1EB2" modified="2018-04-25" version="1" fragment="single">MKPPSAMPCDMVAIASLIRKHGVELIAIGNGTASRETEKLVADLLGELPAPRPTKVIVSEAGASVYSASELAAKEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQHRLGRSLEAVVEDAVNAVGVDLNTASAPLLAHVSGLGPSLAEAIVAHRDANGAFRNRKALLKVPRLGPRAYEQCAGFLRIREGEEPLDASSVHPEAYGVARKIVAACGRDLRSLMGDEAKLKALDPARFVDGSFGLPTVRDILAELAKPGRDPRPAFVTATFAEGVEDIRDLKPGMLLEGTVTNVAAFGAFVDVGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVPRKRIGLTMRKEAPRPEARPQGQTQKPQGKAQPQGRRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX5</accession>
    <name>A0A2M9PCX5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Class I poly(R)-hydroxyalkanoic acid synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_08730</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000470">
        <property type="protein sequence ID" value="PJN95395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010963">
        <property type="entry name" value="PHA_synth_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010941">
        <property type="entry name" value="PhaC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07167">
        <property type="entry name" value="PhaC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01838">
        <property type="entry name" value="PHA_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PhaC_N" evidence="5">
        <location>
            <begin position="141"/>
            <end position="311"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="630" mass="70501" checksum="35A80F553D8D1B04" modified="2018-04-25" version="1">MRREVGNGRAIRDMRHGGLPIDWERPPISFAAMNGQAMMRSKRRGKRMSQDSGAAQAAQFWELLQRAQKLTLAAQSAALAKATGQDFSIVDAGSGGAAMMQAFTQFAQHPMELAKFQQSVWQNATKAWVDAWTGSSQAAPDKRFRDGTWDEDPISRGLRDSHLAIEQAAEELLEALPKGSKDHLSVEFYTRQFLSAVSPSNFLMLNPAARNRFVETEGQSVLDGFRNLLDDLERGEGRLEISTNDPEAFVVGRDLATTPGKVVFQNELMQLIQYEPMTETQRKRPLLFVPAWINKYYILDLRPKNSLVRYMLERGHSVFVISWVNPTKEHAERSFQDYMRLGPLAALDAIEAATGEKRVNVLGFCIGGILVTATLAWLAARKDDRIAAATTLATMVDFTDVGEIGVFIDRDRLAALRAHMAETGYLENHHLQDMFSMIRENDLIWSFHVMNYLMGKKPPAFDLLFWNSDSTRLPAAMLLWYLEKVYIENGLRKPGHLSLDGTPIDISKIRTPCFVLATKEDHIAPWTSVYPTARLLGGEVRFVLGGSGHIAGVINPPAERPKYGYWTRDDYPEAAEDWLAGATFTEGSWWPAWAEWLEKKDRAKPVAARVPGDRGLAVIEAAPGSYVLGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ6</accession>
    <name>A0A2M9PCZ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000469">
        <property type="protein sequence ID" value="PJN95398.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014883584" evidence="1">
        <location>
            <begin position="27"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95398.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="36133" checksum="1C0FF9631AD4BE93" modified="2018-04-25" version="1" fragment="single">MFLIRSVLRLAASGLLALGISAAALSAQTDPLPSWNDGAAKQAILDFVTRTTTEGSADFVPPADRIAAFDQDGTLWVEQPVYTEFLFVMDRVPDLVKAHPELAEKPAFAAILSKDQKRIAALDARELFEVLVAALSGMTPDALGEEVNAWLKTARDPRWDRPFIDLTYLPMQEALTYLRANGYKTFIATGGSVGVVAPYAEEFYGIPPEQVSGSAQDLKFEIVDGKPVLMREPKLALENIEAGKIENFRMVYGRTPHAQFGNSSSDDQQALQYVKSSPGLRLSVAILHDDAEREYAYGPAQGLPDSPVGTFSQEMYDLGKKEGWVIVSMK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD50</accession>
    <name>A0A2M9PD50_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000447">
        <property type="protein sequence ID" value="PJN95448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="7035" checksum="9273396416B37DD5" modified="2018-04-25" version="1">MAERAIEVRSRDLDDLRIKLEIWRTLVQGLEDEEMASTQNRLVLSIESDLERLRRGPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD53</accession>
    <name>A0A2M9PD53_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH luxR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000438">
        <property type="protein sequence ID" value="PJN95471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="42"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13680" checksum="AFD340C9036BEDB8" modified="2018-04-25" version="1" fragment="single">SGVDVPDDLLRHVWPLGWDHVTLTGDYRWSADTEALEERFAEWGLTPSERDVAWFTIKGLSLAEIARMRQTSDGTVKAQSNAIYRKAGVSGRTQLLSLFLEDLMEEGPRAAARRPAPVAVPSSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD65</accession>
    <name>A0A2M9PD65_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-keto-5-aminohexanoate cleavage protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000440">
        <property type="protein sequence ID" value="PJN95463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="19437" checksum="B38D3B37CBB638AB" modified="2018-04-25" version="1" fragment="single">DMASLSVGSNNFPTRVYENSPDLVDWLASEMLTYGVKPEIEAFDLSHIFQAVAMAKDGRLPSPLYVQFVMGVKNAMPVDREVFDFYIATLKRLAPDAEWCGAGIGPNQIVLNEWCVASGGHARTGLEDNLRIDRDTLAPSNAALVRRVVDLCDKYERPVATPAEARALLKLPQTVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF3</accession>
    <name>A0A2M9PDF3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000408">
        <property type="protein sequence ID" value="PJN95542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="125"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="153"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="202"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="227"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="258"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="334"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="362"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="393"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="439"/>
            <end position="459"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="466"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="489"/>
            <end position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="530" mass="56205" checksum="C2E613CA8DB20016" modified="2018-04-25" version="1">MTRERDRTMDKTPKLWVPGDWNAFFGFGTNILVNLLVLTGLLQFVLQMPSEIIFGRILPALGLMMFLSTSYYAWLAWRHAKMTGRDDVCALPSGISVPHMFVVTFVIMLPIATMTGDPIRGWEAGLVWVFFQSFILMVGGFVAPFIRRVTPRAALLGTLAGVSIAFISMRPAMEMFLNPVIGVVCFAIIMAAWFGGVRYPRAIPAGLVAIAFGMLIAWGAAALGLPGAGMSLGGLTSAFSTFGFSLPIPAIDHVFSGFEFLGIILVTAIPFGIYDLVEAMDNVESAEAAGDHYPTTRVLTADGVVSLIGCLMGNPFINAVYIGHPGWKAMGGRIGYSLGVGVMVILLCWFGVIAVLLALVPVVAISPILLYIGMLIGAQAFQTTPLTHAPAIVLGLLPHLAAWALTLIHGALGAAGVAVTPELIEAMRTNGVLYHGLEVFGHGAILTGLILAAVGVFVIERKFEMAAIFAFAGAVMTFFGFMHGEAVGFGVSPGVAVAYVLVAGFLYGCGKLEWSRDGEPAADSVPQPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ2</accession>
    <name>A0A2M9PDJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07600</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000387">
        <property type="protein sequence ID" value="PJN95584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008922">
        <property type="entry name" value="Di-copper_centre_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002227">
        <property type="entry name" value="Tyrosinase_Cu-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00264">
        <property type="entry name" value="Tyrosinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00092">
        <property type="entry name" value="TYROSINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48056">
        <property type="entry name" value="SSF48056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00497">
        <property type="entry name" value="TYROSINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00498">
        <property type="entry name" value="TYROSINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942218" evidence="2">
        <location>
            <begin position="25"/>
            <end position="566"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosinase_Cu-bd" evidence="3">
        <location>
            <begin position="202"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosinase_Cu-bd" evidence="4">
        <location>
            <begin position="358"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="405"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="64"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="566"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="566" mass="62116" checksum="AD0567E500041FE5" modified="2018-04-25" version="1" fragment="single">MRPIASWIAGAFVGVAILAGQAGAADLFIADTVTDLGVEPNTGSSTTTSPDIWIRRSPDPNYNPAPFNAANPSWTPHPHQNAQYVDPRLSTPNWVYVRVRNRGSGPTPANARLKLYWTKVRGAQTWPTEWVDYFPTPGGVLNGMEITKPRRNAARATQAERNAYIQALLSIDRSSFAFPDGVTYWDKQNQIHSNSVVMSAAHVNPAFLPWHREFLNRYEALLQTADPTLKLLYWDWQQDPRQPINGFNYFSTSFMGAIGRGTTTPVRAPLTPLMSPVQVVRNSRATGAAFGYRRDSSVLARTQYHDVSGVNGLRTFIEGGSYHNRAHVDIGGSQPSTCSTQPSTCLFSLSYVAQAARDPFFFLLHGNVDRLWAQWQRANPQRYDSRPGATPYGLNSSNVNITRSMPPWDGSSNMRPWVSGSPERKTKTSLDPSVVSPPIYDTAPLTIPVLQTGQSVILQIPWYPPNPTQFPTGPASNQSFTLLARIETSTTAPFGMTTAEGGSIQTNVRNNNNIARRNVAVLAPAITLAGAPTTRTLSTTAAFAEPSTVQILNDFDQMVMSSICTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK0</accession>
    <name>A0A2M9PDK0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Large-conductance mechanosensitive channel</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">mscL</name>
        <name evidence="11" type="ORF">CNY89_07555</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.</text>
    </comment>
    <comment type="subunit">
        <text evidence="10">Homopentamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell inner membrane</location>
            <topology evidence="10">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 10">Belongs to the MscL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000384">
        <property type="protein sequence ID" value="PJN95592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00115">
        <property type="entry name" value="MscL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019823">
        <property type="entry name" value="Mechanosensitive_channel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001185">
        <property type="entry name" value="MS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037673">
        <property type="entry name" value="MSC/AndL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036019">
        <property type="entry name" value="MscL_channel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30266">
        <property type="entry name" value="PTHR30266"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01741">
        <property type="entry name" value="MscL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01264">
        <property type="entry name" value="MECHCHANNEL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81330">
        <property type="entry name" value="SSF81330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00220">
        <property type="entry name" value="mscL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01327">
        <property type="entry name" value="MSCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4 10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0407">Ion channel</keyword>
    <keyword evidence="7 10" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 10" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15294" checksum="B4BFDF5979E41EFD" modified="2018-04-25" version="1">MFKEFRAFIARGNVMDLAVGIIIGAAFTAIVNSLVADLVNPLVGIFTGGVDFSNLFVALSTESYPTVAAAEAAGVAVFRYGSFITAVINFLIIAWVVFLLVKAMNAVRASLTHEEKEAAKGPTQEEILIEIRDLLRDRSKSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL5</accession>
    <name>A0A2M9PDL5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ornithine carbamoyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07340</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the aspartate/ornithine carbamoyltransferase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000369">
        <property type="protein sequence ID" value="PJN95629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016597">
        <property type="term" value="F:amino acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004585">
        <property type="term" value="F:ornithine carbamoyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1370">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006132">
        <property type="entry name" value="Asp/Orn_carbamoyltranf_P-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006130">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036901">
        <property type="entry name" value="Asp/Orn_carbamoylTrfase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006131">
        <property type="entry name" value="Asp_carbamoyltransf_Asp/Orn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002292">
        <property type="entry name" value="Orn/put_carbamltrans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00185">
        <property type="entry name" value="OTCace"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02729">
        <property type="entry name" value="OTCace_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00100">
        <property type="entry name" value="AOTCASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00102">
        <property type="entry name" value="OTCASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53671">
        <property type="entry name" value="SSF53671"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00097">
        <property type="entry name" value="CARBAMOYLTRANSFERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="OTCace_N" evidence="4">
        <location>
            <begin position="2"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="domain" description="OTCace" evidence="3">
        <location>
            <begin position="108"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="18469" checksum="5BD9C06A3C296346" modified="2018-04-25" version="1" fragment="single">MVALIFEKPSTRTRVSFDVGVRQMGGQSLVLSGAEMQLGHGETIADTARVLSRYVDLIMIRTFEEATLQELAEFSSVPVINGLTNASHPCQIMADILTYEERRGPIRGRKVVWMGDGNNVCASFLHAAGQFGFDFTFAGPPTLDPDPRAVAFARERGVTVAIERGRGPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT3</accession>
    <name>A0A2M9PDT3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS1595 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000353">
        <property type="protein sequence ID" value="PJN95668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024445">
        <property type="entry name" value="Tnp_ISXO2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024442">
        <property type="entry name" value="Transposase_Zn_ribbon"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12762">
        <property type="entry name" value="DDE_Tnp_IS1595"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12760">
        <property type="entry name" value="Zn_Tnp_IS1595"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Zn_Tnp_IS1595" evidence="1">
        <location>
            <begin position="23"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_IS1595" evidence="2">
        <location>
            <begin position="138"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12762"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="23275" checksum="EA4D39DC6D325D93" modified="2018-04-25" version="1" fragment="single">MASHFLLSAAARTLKLKNIYRMSDDEAFQAFAAIRFAETGGEAFCPDCGCCDPYFIATRRKWKCRACGKQFSATSGTIFASRKMAFVDLLAAICIFVNAAKGISALQLSRDLDCQYKTAFVLAHKLREAMAKGNDDVTLSGVVEVDGAYFGGHVRPENEKKDRKDRRLSENRNPDRRVVVVLRQRKGRTLPFVVKQEADGVEIIRQRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV1</accession>
    <name>A0A2M9PDV1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06745</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000326">
        <property type="protein sequence ID" value="PJN95735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="256"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="280"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="303"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="34384" checksum="C3E1E0E548377DB6" modified="2018-04-25" version="1">MTAPATTPRRRGIDFHILGPLLALIALVVLGAMLNSNFLSYGNVTNVLARSAFIGIIAVGMTFVITAGGIDLSVGSMAAFVAGAMILAMNALIPAMGVGVPVILCGMVVALACGIAAGWLNGFLISKVGIEAFIVTLGSMGIYRSLVTWLADGGTLSLQFDLRTLYRPVYYGGLFGVAWPILVFALVAILGEIVMRHTPFGRYCAALGANEQVARYSAVKVDRVRMGTYVLLGGLVGLATIMYVPRLGSASGATGVLWELEAIAAVIIGGTLLKGGYGRVWGTVVGVLILSLIDNILNLASIVSPYLNGAIQGVIVILAVVLQRDRKSAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX4</accession>
    <name>A0A2M9PDX4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Sec-independent protein translocase protein TatA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">tatA</name>
        <name evidence="8" type="ORF">CNY89_06665</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the TatA/E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000321">
        <property type="protein sequence ID" value="PJN95750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033281">
        <property type="term" value="C:TAT protein transport complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00236">
        <property type="entry name" value="TatA_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003369">
        <property type="entry name" value="TatA/B/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006312">
        <property type="entry name" value="TatA/E"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02416">
        <property type="entry name" value="TatA_B_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 7" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7164" checksum="79F4E58D908894A8" modified="2018-04-25" version="1">MLNNIGPAGLLLIAIVVLVLFGRGKVAGLMGEVGKGITSFKRGLNDGKAEIENASAESARDITPEKDKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY4</accession>
    <name>A0A2M9PDY4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">50S ribosomal protein L30</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpmD</name>
        <name evidence="7" type="ORF">CNY89_06690</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="2 5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL30 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000322">
        <property type="protein sequence ID" value="PJN95746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01658">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01371_B">
        <property type="entry name" value="Ribosomal_L30_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036919">
        <property type="entry name" value="L30_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005996">
        <property type="entry name" value="Ribosomal_L30_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016082">
        <property type="entry name" value="Ribosomal_L30_ferredoxin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15892">
        <property type="entry name" value="PTHR15892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00327">
        <property type="entry name" value="Ribosomal_L30"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002211">
        <property type="entry name" value="Ribosomal_L30_bac-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55129">
        <property type="entry name" value="SSF55129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01308">
        <property type="entry name" value="rpmD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L30" evidence="6">
        <location>
            <begin position="5"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6800" checksum="EE4A904B9032A4F9" modified="2018-04-25" version="1">MATIVVKQIGSPIRRPDVQRRTLIGLGLNKMHKTRELEDTPAVRGMVASIPHLVTIVEERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE33</accession>
    <name>A0A2M9PE33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">PepSY domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06310</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000297">
        <property type="protein sequence ID" value="PJN95810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025711">
        <property type="entry name" value="PepSY"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13670">
        <property type="entry name" value="PepSY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014767400" evidence="2">
        <location>
            <begin position="22"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="domain" description="PepSY" evidence="3">
        <location>
            <begin position="6"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="86"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11735" checksum="D010D7E94096DD5B" modified="2018-04-25" version="1">MKKSLTILGSLGLLLAGAASADDDCFVPMADWQPREAVVRLAEENGWAVRRVKIDDGCYEIDGIDAEGRRIEVTVHPATLQVIAFEYEDDDDDHPRPDRERGEHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI9</accession>
    <name>A0A2M9PEI9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8 10">Integration host factor subunit alpha</fullName>
            <shortName evidence="8">IHF-alpha</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">ihfA</name>
        <name evidence="8" type="synonym">himA</name>
        <name evidence="11" type="ORF">CNY89_05365</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 10">This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8 10">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 9">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000243">
        <property type="protein sequence ID" value="PJN95967.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13835">
        <property type="entry name" value="IHF_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00380">
        <property type="entry name" value="IHF_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005684">
        <property type="entry name" value="IHF_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00987">
        <property type="entry name" value="himA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8 10" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5 8 10" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 10" id="KW-0804">Transcription</keyword>
    <keyword evidence="4 8 10" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="3 8 10" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00018329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00380"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95967.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11199" checksum="7EAD29013B1FBA50" modified="2018-04-25" version="1">MSEKTLTRMELSEAVFRTVGLSRNESADLVESVLNHISDALVRGETVKISSFGTFSVRAKTARIGRNPKTGEEVPIEPRRVLTFRPSHIMKDRVDSGNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ1</accession>
    <name>A0A2M9PEQ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Exlusion protein FxsA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000224">
        <property type="protein sequence ID" value="PJN96019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007313">
        <property type="entry name" value="FxsA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35335">
        <property type="entry name" value="PTHR35335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04186">
        <property type="entry name" value="FxsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="74"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="127"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="18254" checksum="70F3A6C731AB9DAD" modified="2018-04-25" version="1">MWIMLLILALPFIEIALFIQVGGWIGLWPTLGLVVLSVFLGSAILRAQGAQALRRLQAAVASNRDPSEPLAHGALIAAAGVLLILPGFFTDAIGLLLLLPPVRSALIRAASRRVRSRTVVFTTARTDPRSRPRDYPAEPRGEAIEGDYEVLDDVPPSQRGASGWTRPQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES3</accession>
    <name>A0A2M9PES3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">3-dehydroquinate dehydratase</fullName>
            <shortName evidence="8">3-dehydroquinase</shortName>
            <ecNumber evidence="6 8">4.2.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Type II DHQase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8 11" type="primary">aroQ</name>
        <name evidence="11" type="ORF">CNY89_05240</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Catalyzes a trans-dehydration via an enolate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="6 8"/>
    <dbReference type="EMBL" id="PHNO01000236">
        <property type="protein sequence ID" value="PJN95984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00466">
        <property type="entry name" value="DHQase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00169">
        <property type="entry name" value="AroQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018509">
        <property type="entry name" value="DHquinase_II_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21272">
        <property type="entry name" value="PTHR21272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001399">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01088">
        <property type="entry name" value="aroQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01029">
        <property type="entry name" value="DEHYDROQUINASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8 9">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="115"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="8 10">
        <location>
            <position position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001399-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16805" checksum="AF1390F6909FE858" modified="2018-04-25" version="1">METPKILCLNGPNLNMLGVREPELYGRTTLADIETAVRAKAATLGLEVEFKQSNYEGELVTWIQQAHGNVAGVIINPGAYTHTSIAIADALRILTAPIIELHFNNSYRHADRAFRHLSHVRPVATGVIFGFGAAGYLVAMEAMKNILTPPFPKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX2</accession>
    <name>A0A2M9PEX2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Electron transfer flavoprotein subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000205">
        <property type="protein sequence ID" value="PJN96076.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001308">
        <property type="entry name" value="ETF_a/FixB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014731">
        <property type="entry name" value="ETF_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018206">
        <property type="entry name" value="ETF_asu_C_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43153">
        <property type="entry name" value="PTHR43153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00766">
        <property type="entry name" value="ETF_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00696">
        <property type="entry name" value="ETF_ALPHA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ETF_alpha" evidence="1">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96076.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="11701" checksum="406E1F4D6990D3C1" modified="2018-04-25" version="1" fragment="single">ARVVVSGGRGIGSEANFAIVEALADKLGGAVGASRAAVDSGYAPNDLQVGQTGKVVAPELYVALGISGAIQHLAGMKDSKVIVAINKDPEAPIFQVADYGLVADLFEAAPALVEALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY7</accession>
    <name>A0A2M9PEY7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000211">
        <property type="protein sequence ID" value="PJN96054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7319" checksum="2B9EE557B7F204F1" modified="2018-04-25" version="1" fragment="single">LTTYTTLVNYQHSLARLPLSAVVFDEIQALKNPTSLRACAARAMNADFRIGRRDAPARSCGCPPTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF80</accession>
    <name>A0A2M9PF80_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase family 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000183">
        <property type="protein sequence ID" value="PJN96144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="22446" checksum="47D1D22F3CAB0937" modified="2018-04-25" version="1" fragment="single">SAILRLVHDPVRRGRLGRRLNTEVAARCSTDVVVPAWQKLFAEALAEVPPAPPPRIFRSFVQGGWECSSHRRGDGRRLDLVASTGHDAHAEADYRQLGGMGIATFRDGLRWHRIETRPGVHDFASWTPMLRAARRTGAQVIWDLMHYGWPDDLDIWSEAFADRFAAFATAAARRFAEETDVVPFWCPINEISFWRPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF94</accession>
    <name>A0A2M9PF94_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03850</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000162">
        <property type="protein sequence ID" value="PJN96225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008922">
        <property type="entry name" value="Di-copper_centre_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002227">
        <property type="entry name" value="Tyrosinase_Cu-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00264">
        <property type="entry name" value="Tyrosinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00092">
        <property type="entry name" value="TYROSINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48056">
        <property type="entry name" value="SSF48056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00497">
        <property type="entry name" value="TYROSINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00498">
        <property type="entry name" value="TYROSINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyrosinase_Cu-bd" evidence="2">
        <location>
            <begin position="161"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="domain" description="Tyrosinase_Cu-bd" evidence="3">
        <location>
            <begin position="317"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="341"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="367"/>
            <end position="389"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="411"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00498"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="411" mass="45748" checksum="451175A8F91361A7" modified="2018-04-25" version="1" fragment="single">MPTTSSPDIWVRRSPDPNYNPAPFTAASPPWAPQPHQNAQHFDPTWGAPNWVYVRVSNRGTGATPASARLKLYWTKVGSNQSWPTTWVDYFATVNGQSLLNGMEITKPRRNAANVTQAERDAYVQAVLAADTTDFAFPDGVTFWDKQNDIHSAGPVQSAAHGNPAFLPWHREFVNRYEVLLQKTNPTLKLLYWDWTRDPRQPINGFSYFSTDFMGAIGAGTTTEVREPFVPLMSPIQLVRNSRAPDQAFGFRSDPNVLARGQYHNLTGNNGLRTFIETGSYHNRAHVDIGGSQPTTCPLQPETCLYALSYVVQAARDPFFFLLHGNVDRLWAQWQRANPQRFDSRPGATPYGLDSSNSNITRTMPPWDGSAEMEPWTSGSPAVRSKTSLDPSVVSPPIYDTAPLAIPVLQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB1</accession>
    <name>A0A2M9PFB1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADH:ubiquinone oxidoreductase subunit NDUFA12</fullName>
            <ecNumber evidence="2">1.6.99.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.99.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000162">
        <property type="protein sequence ID" value="PJN96221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032981">
        <property type="term" value="P:mitochondrial respiratory chain complex I assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007763">
        <property type="entry name" value="NDUFA12"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12910">
        <property type="entry name" value="PTHR12910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05071">
        <property type="entry name" value="NDUFA12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0830">Ubiquinone</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10437" checksum="A403FE2D3075B86E" modified="2018-04-25" version="1" fragment="single">AQGNVYYQTADGARRWVIYNGDIEASRVGPEWHGWLHHTWQEPPTVAPLPRKAWEKPHLPNLTGTDAAYRPAGSILSPHPRAPQDYEAWTPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD4</accession>
    <name>A0A2M9PFD4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Arylesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03790</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000160">
        <property type="protein sequence ID" value="PJN96232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014780173" evidence="1">
        <location>
            <begin position="38"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="45"/>
            <end position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="232" mass="23671" checksum="0D8C5B5AC24B47EA" modified="2018-04-25" version="1">MKRIILGRTTTDAPYGARGWLSNLTLTLALVAGSAAAAQPVTIAALGDSLTAGYGLPEEEGFVPQLQAWLRANGAPEVTVVNAGVSGDTSAGGLARIDWTLTEDVEGLILALGANDLLRGVDPAVTRANLDGILARAEARDLPVLLAGIPAPGNYGPEYQAQFDAIFPALAEKHGATLFPNFLAGLGDRPDLVTVGPLMQPDGLHPNAQGVAAVVAAIGPAVLDLVSAAQQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI5</accession>
    <name>A0A2M9PFI5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable transcriptional regulatory protein CNY89_03465</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03465</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the TACO1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000141">
        <property type="protein sequence ID" value="PJN96288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.980">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00693">
        <property type="entry name" value="Transcrip_reg_TACO1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017856">
        <property type="entry name" value="Integrase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002876">
        <property type="entry name" value="Transcrip_reg_TACO1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026564">
        <property type="entry name" value="Transcrip_reg_TACO1-like_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029072">
        <property type="entry name" value="YebC-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12532">
        <property type="entry name" value="PTHR12532"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01709">
        <property type="entry name" value="Transcrip_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75625">
        <property type="entry name" value="SSF75625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01033">
        <property type="entry name" value="TIGR01033"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 4" id="KW-0805">Transcription regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008724"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="26649" checksum="E59A2024CD7C2D4A" modified="2018-04-25" version="1">MAGHSKWANIQHRKGRQDAVRAKMFSKFSKEITVAAKMGDPDPDKNPRLRLAVKEAKAASMPKENIERAIKKSIAGDSENYEEVRYEGYGPNGVAIIVEAMTDNRNRTASNVRSTFTKRGGNLGETGSVSFMFDRVGQIVYSKGDADAVMEAAIEAGAQDVESSEEGHVIWCAVEDLNDVSTALEASLGEADSTKLVWKPQTTTELELEAAQSLMKLIEALEDDDDVQSVTANFEISDEVMAQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ7</accession>
    <name>A0A2M9PFJ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03270</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000132">
        <property type="protein sequence ID" value="PJN96316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009331">
        <property type="term" value="C:glycerol-3-phosphate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004368">
        <property type="term" value="F:glycerol-3-phosphate dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.8.870">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031656">
        <property type="entry name" value="DAO_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038299">
        <property type="entry name" value="DAO_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000447">
        <property type="entry name" value="G3P_DH_FAD-dep"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11985">
        <property type="entry name" value="PTHR11985"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16901">
        <property type="entry name" value="DAO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="3" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="6">
        <location>
            <begin position="7"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="DAO_C" evidence="7">
        <location>
            <begin position="207"/>
            <end position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF16901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="290" mass="31565" checksum="59A72202EDB39701" modified="2018-04-25" version="1">MTCARSSLKRHGGLVTGVRAREVETGEEFEFDARVVINAAGIFSDEIRQLDDPAEAPMTALSQGTHLVLGRIFLPGESAILVPKTADGRVLFAVPWHGRVIVGATGAEVGTATLEPRARADEVDFLLRHAAIYLARDPRREDVLSIYSGIRPLVRASGDKGAAALARNHVLTISRSNLVTITGGKWTTYRKMGRTRWTPPSWWRGRDVSLHPRLPYFLGEVAWAARRQMARTVEDVLARRTPALLLDARASAEAAPAVADILAGVLGRDAAWQATQIAAYRALAEGYVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU0</accession>
    <name>A0A2M9PFU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02645</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000102">
        <property type="protein sequence ID" value="PJN96427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016774">
        <property type="term" value="F:phosphotransferase activity, carboxyl group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023865">
        <property type="entry name" value="Aliphatic_acid_kinase_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01075">
        <property type="entry name" value="ACETATE_KINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6122" checksum="630FD1660CC2B4FF" modified="2018-04-25" version="1" fragment="single">MADAILVLNAGSSSLKFTGYLVEAQGLAKVVSGKAEELTGAARFQARDASGAVVATHAWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG71</accession>
    <name>A0A2M9PG71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000071">
        <property type="protein sequence ID" value="PJN96538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018692">
        <property type="entry name" value="DUF2189"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09955">
        <property type="entry name" value="DUF2189"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="124"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="264" mass="28383" checksum="9EE34E916E85CBC1" modified="2018-04-25" version="1">MNAQVQAGAPATPAARPVVRSISVDDVYKSVAQGWRDFKAAPRYGMFFGAVYALGGMAIFALLWLMDISGWILPLAAAFPLVGPFVAIGLYEVSRRLETGEPLGWSEVLGVVWRERERQMPSMAFVVLAGFMIWTWAAWLLGGVVLASAGHGAHFDLDVLFGTRAGLTLLVMGTLVGGVIAFVLFAVTVVAIPMLMDRDVDYVTALVTSFRATTSNLVPMLTWAAVIAAMSAAAMVPFFLGLIVALPVLGHATWHIYRKVIAPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG74</accession>
    <name>A0A2M9PG74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Agmatinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">speB</name>
        <name evidence="5" type="ORF">CNY89_01845</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the arginase family. Agmatinase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000067">
        <property type="protein sequence ID" value="PJN96557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016813">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901564">
        <property type="term" value="P:organonitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005925">
        <property type="entry name" value="Agmatinase-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11358">
        <property type="entry name" value="PTHR11358"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036979">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01230">
        <property type="entry name" value="agmatinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="34370" checksum="26BF5FA13047EEED" modified="2018-04-25" version="1">MADERGDAAFRAGDARHHWPEMTYGGALSFLRRPYSRNLADVDVAVMGVPYDCAVTYRPGCRLGPRAIRAASVQLAELKAFPWGFDLYESLSVVDWGDVMLDPHHPETVAPAIQAAAAGIIATGTKLLAFGGDHFVTWPLLKAHAERHGPLALIHVDAHGDLWPDDPGRIDHGTMMGRAVRDGLVDAARSTQVGIRTFHDSTEGLEVLTAPWVHRNGITAAVEMATARAGEGPVYLSFDIDALDPAHAPGTGTPVPGGLASWQALEFVRGLGALDLVGMDVVEVSPPFDHAEITAIAAATLAHDWLCLIAQKAGARAVPVGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB2</accession>
    <name>A0A2M9PGB2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">2-dehydro-3-deoxy-phosphogluconate aldolase</fullName>
            <ecNumber evidence="3">4.1.2.14</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01655</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-dehydro-3-deoxy-6-phospho-D-gluconate = D-glyceraldehyde 3-phosphate + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:17089"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:57569"/>
            <dbReference type="ChEBI" id="CHEBI:59776"/>
            <dbReference type="EC" id="4.1.2.14"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the KHG/KDPG aldolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.2.14" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000060">
        <property type="protein sequence ID" value="PJN96587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008675">
        <property type="term" value="F:2-dehydro-3-deoxy-phosphogluconate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00452">
        <property type="entry name" value="KDPG_aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000887">
        <property type="entry name" value="Aldlse_KDPG_KHG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031337">
        <property type="entry name" value="KDPG/KHG_AS_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30246">
        <property type="entry name" value="PTHR30246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01081">
        <property type="entry name" value="Aldolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01182">
        <property type="entry name" value="eda"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00159">
        <property type="entry name" value="ALDOLASE_KDPG_KHG_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006906"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="22262" checksum="BD107C913A3D2951" modified="2018-04-25" version="1">MTPQEASRKSRELCGLAPVIPVLVIDDLDHARPLAEALVKGGLPVLEVTLRTPVALEAIRIMAEVEGGVVGAGTLLKPSDVKAAVKAGAKFGVSPGVTKKLAEACEDADLPLLGGIATVTEAMRMLERGYEVCKFFPAEANGGAKALKSFAGPLPQVSFCPTGGVTPQNAPDYLKLPNVLCVGGSWVADPKLMKAGRWDEIEALAREAAALPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF6</accession>
    <name>A0A2M9PGF6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000057">
        <property type="protein sequence ID" value="PJN96602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9115" checksum="04085B0B5CF023C4" modified="2018-04-25" version="1">MTRVAVVGNSHLGAIKLGWEQVSARHPEMQVEFFAAPGTHYYRLEMFEPRKFGLPPGSGTSPPALQCCDAIYASLVQNVPVGVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK0</accession>
    <name>A0A2M9PGK0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="8447" checksum="BE361E9D6125A032" modified="2018-04-25" version="1">MGVSSFQPGANSFGRHGVAITPSDAADIPGGAVKAVVTTSAGDLSIIPADSATAIAFTGVGVGFIPPYVVRRVTATGTTATVATVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH69</accession>
    <name>A0A2M9PH69_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14900" checksum="902D004897F6A3DB" modified="2018-04-25" version="1" fragment="single">IAASAPINKQAAMATGRGGEHYAPPAHRNNAISSDVMLPYRGPSREELICPDFHNLVGVSWGRSVVMGIFDHERAEVVIGSAKSRKQKWVIRCACGRFETRSSKVIRAAIPRTGHCAHCDHTEWLRNRHKRPHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P464</accession>
    <name>A0A2M9P464_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004901">
        <property type="protein sequence ID" value="PJN92320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7119" checksum="A07CCB6C5760CA06" modified="2018-04-25" version="1" fragment="single">MALKFKETCGLHAEGYSAAEVLHGPAAIVRADFEMALKFKETCGLHAEGYSAAEVLHGPAAIVRADF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C4</accession>
    <name>A0A2M9P4C4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004717">
        <property type="protein sequence ID" value="PJN92380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6713" checksum="6D87CC4D3CBE7FCF" modified="2018-04-25" version="1" fragment="single">MDHGEEDDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C8</accession>
    <name>A0A2M9P4C8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cell division topological specificity factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_30235</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MinE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004724">
        <property type="protein sequence ID" value="PJN92379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032955">
        <property type="term" value="P:regulation of division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1070.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005527">
        <property type="entry name" value="MinE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036707">
        <property type="entry name" value="MinE_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03776">
        <property type="entry name" value="MinE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55229">
        <property type="entry name" value="SSF55229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7828" checksum="7D8FA07A6D7114EA" modified="2018-04-25" version="1" fragment="single">PQLQRDILEVIERYMNVGGDSVDIKLERGDELSRSRSGGEVVAEVVVLDRHVLQSAHVQAILRHLLDVVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L0</accession>
    <name>A0A2M9P4L0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004468">
        <property type="protein sequence ID" value="PJN92459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8113" checksum="EF86467296175B12" modified="2018-04-25" version="1" fragment="single">SVFPNKSFIPGYVRSYARYLGLDPEQVTAQFRAETGIEEGGKNGLEGRVRLEGEGGAVEFGPGEAFVVEGGFAGTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R2</accession>
    <name>A0A2M9P4R2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004344">
        <property type="protein sequence ID" value="PJN92498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8512" checksum="683494DBD9A805BC" modified="2018-04-25" version="1" fragment="single">AQVDRMMIGSAFSTRLPFETEDATVQGGSLKGATWWCGGVAERALVRAQVDRMMIGSAFSTRLPFETEDATVQGGSLKGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V6</accession>
    <name>A0A2M9P4V6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004135">
        <property type="protein sequence ID" value="PJN92559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7099" checksum="52CDC9350C102906" modified="2018-04-25" version="1" fragment="single">AEGKLYLYVGIDRTSKFAFAWLADKATTVTARAFLDALAAAVPYKIAIVLTDTASSSQTCRRTVQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W8</accession>
    <name>A0A2M9P4W8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004009">
        <property type="protein sequence ID" value="PJN92601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036278">
        <property type="entry name" value="Sialidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50939">
        <property type="entry name" value="SSF50939"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9123" checksum="F163CCB0B4385398" modified="2018-04-25" version="1" fragment="single">WTGSHDTAAVAVSTDRGASWDLVHVPDSTGCVLTLRDDGAWMLPLFLCKTSPGARWTGSHDTAAVAVSTDRGASWDLVHVPDSTGCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P506</accession>
    <name>A0A2M9P506_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrilase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004006">
        <property type="protein sequence ID" value="PJN92603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6622" checksum="D03859B66E071FF2" modified="2018-04-25" version="1" fragment="single">PFGGVFAGPMRKEKGFLFAEIDVAAAKASRRKFDASGHYARPDIFSLHVNRDVQVPARFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P525</accession>
    <name>A0A2M9P525_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003926">
        <property type="protein sequence ID" value="PJN92629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5376" checksum="1CCB4CAD53BC539D" modified="2018-04-25" version="1" fragment="single">MKPPTEGFGKTLEATDEVVIEATGNSMAAARVLSPLVARVVIANPLQVKAIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P546</accession>
    <name>A0A2M9P546_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003835">
        <property type="protein sequence ID" value="PJN92662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M10_C" evidence="1">
        <location>
            <begin position="5"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M10_C" evidence="1">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9569" checksum="97DD8C33CCD31781" modified="2018-04-25" version="1" fragment="single">GANRIFATIWDGGGYDTYDLSSYTTNLSIDLSPGGYSSFSAAQKAYLGGGPNGGYARGNIFNALQYGNDTRSLIEAAIGGSGNDTMIGNVADN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E1</accession>
    <name>A0A2M9P5E1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26785</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003538">
        <property type="protein sequence ID" value="PJN92766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11243" checksum="7B54C729348EA164" modified="2018-04-25" version="1" fragment="single">VKALGMSGISKSQVSRLCAEIDERVTAFLDRPPDRPLEGDWPYLWIDATYLKVRQNGRIVSVAVIVAVGVNTDGRREVLGMDIGPSEAEPFWTAFLRKLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J9</accession>
    <name>A0A2M9P5J9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003408">
        <property type="protein sequence ID" value="PJN92809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="10336" checksum="57E445DDA24E94C4" modified="2018-04-25" version="1" fragment="single">MSWTAFSAATTGTYQITGFTAGQSRTGRVRAVNAVDADPDNMSSSKTTTATTGSALVGGTVTEANGFRVHTLTADGDLTVHGAAMLVNYEEVGGGGGGGYGRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P643</accession>
    <name>A0A2M9P643_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sugar transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17665</name>
        <name evidence="6" type="ORF">CNY89_24655</name>
        <name evidence="5" type="ORF">CNY89_26380</name>
    </gene>
    <organism evidence="6 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial sugar transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003417">
        <property type="protein sequence ID" value="PJN92806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002894">
        <property type="protein sequence ID" value="PJN93002.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001357">
        <property type="protein sequence ID" value="PJN93905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003362">
        <property type="entry name" value="Bact_transf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02397">
        <property type="entry name" value="Bac_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0270">Exopolysaccharide synthesis</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="35"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="domain" description="Bac_transf" evidence="4">
        <location>
            <begin position="30"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN92806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93002.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7824" checksum="B87B926B8EB544A6" modified="2018-04-25" version="1" fragment="single">MSRLSEVSVEGLAPVYSSPSLSSLYNRFFKRVLDVFLVLLAAPFVLPLVLLMGLMIRRDGGSAFYTQDRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P718</accession>
    <name>A0A2M9P718_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Galactonate dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_21650</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UxaA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002088">
        <property type="protein sequence ID" value="PJN93332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007392">
        <property type="entry name" value="Gal/Altron_deHydtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013974">
        <property type="entry name" value="SAF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04295">
        <property type="entry name" value="GD_AH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08666">
        <property type="entry name" value="SAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAF" evidence="4">
        <location>
            <begin position="4"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="domain" description="GD_AH_C" evidence="3">
        <location>
            <begin position="62"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17322" checksum="CA45034AE7D61170" modified="2018-04-25" version="1" fragment="single">VAARTIPAGALVRRYGQIIGAATGEIPAGAHVHVQNLAMSDHPEDYAFASAAQPLPVANEARTFLGYRRADGRSGTRNYLGVLTSVNCSGSVARFIAEAAEKTDWFRAMTHVDGIVPIVHGSGCGMSGQDEGYATLFRTLQGYARNPNFAGILLVGLGCEVMQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P730</accession>
    <name>A0A2M9P730_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002108">
        <property type="protein sequence ID" value="PJN93320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="17362" checksum="7B063313D72D9AB4" modified="2018-04-25" version="1" fragment="single">MAFTQAAGLDWRYIAPGKPTQNAFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSATAARCYRRAKAQFSTRDSSRRWMSDWGHVSTRRQRARICSTMRPTSSTAPAEASMFERL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P745</accession>
    <name>A0A2M9P745_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EH_Signature domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21370</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002031">
        <property type="protein sequence ID" value="PJN93363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028943">
        <property type="entry name" value="EH_Signature_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15611">
        <property type="entry name" value="EH_Signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EH_Signature" evidence="2">
        <location>
            <begin position="2"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="76"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="76"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF15611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14418" checksum="AA4F4B002EA4CB27" modified="2018-04-25" version="1" fragment="single">DALLSPWKDMSPDHDLKSYLTAKINALYGHPRIGRYKAVWNETSAAAQAIFQRWLTGENIRFFLDVVTTVEKATCGSHGASSGSGCMNRTGSAKLGSPSIPRRNGSQDAGPSVRACRLASKWREVRVATHPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C6</accession>
    <name>A0A2M9P7C6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001900">
        <property type="protein sequence ID" value="PJN93437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="1">
        <location>
            <begin position="2"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15580" checksum="47F035FE7063B702" modified="2018-04-25" version="1" fragment="single">MRIIGYERVSTARQGASGLGLEAQRQAIDGLIAARGGTLLARFTEVESGRNPDRPELAKALHLARVTGATLVIAKLDRLSRNAAFLLALRDSGVRFAAVDLPEANDLTVGIMALVAQAEREAISRRTKEALAVARARGVRLGNPNGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D5</accession>
    <name>A0A2M9P7D5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FrmR/RcnR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001847">
        <property type="protein sequence ID" value="PJN93476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003735">
        <property type="entry name" value="Metal_Tscrpt_repr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038390">
        <property type="entry name" value="Metal_Tscrpt_repr_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02583">
        <property type="entry name" value="Trns_repr_metal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3791" checksum="93F550324D2F5484" modified="2018-04-25" version="1" fragment="single">MKDRKQAAIQRLARLEGQVRGVARMIEEDRYC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G4</accession>
    <name>A0A2M9P7G4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GTA_TIM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001846">
        <property type="protein sequence ID" value="PJN93477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025195">
        <property type="entry name" value="GTA_TIM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13547">
        <property type="entry name" value="GTA_TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GTA_TIM" evidence="1">
        <location>
            <begin position="2"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="21101" checksum="0E8EFBDCB1436371" modified="2018-04-25" version="1" fragment="single">AAEGWPAIYDRSYLQTNIAGGEGYDWFYASATDDPRRCGPPITDGAASKPWVFRYKDLRAWWSNPHYDRPGGVEVGAPTAWVPESKPIWFTELGCPAIDRGTNQPNVFFDPKSSESFTPHFSRGWRDDAIQRAYLEATYLWWGEAANNPLSSVYGGPMVHVPECAAWTWDARPYPFFPALTDVWTDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R3</accession>
    <name>A0A2M9P7R3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001711">
        <property type="protein sequence ID" value="PJN93565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10383" checksum="8FC6F625A3FF725D" modified="2018-04-25" version="1" fragment="single">YIVCLEDGKKFKMLKRHLMTTYGLTPEDYRAKWGLRRDYPMVAPNYAAKRQELAQKIGLGRKGRVQPVVAAEPVLEAAPAPVKRRSRSKAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U2</accession>
    <name>A0A2M9P7U2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PQQ-dependent dehydrogenase, methanol/ethanol family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001681">
        <property type="protein sequence ID" value="PJN93589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014657378" evidence="1">
        <location>
            <begin position="21"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10593" checksum="864D91CF2DCCBA46" modified="2018-04-25" version="1" fragment="single">MNRFVLAVTAALVCGGVAQAQVTEEDLANDATTVGDVLTNGMGRDLQRFSPLAKLTKANVDKLVPAWAFSLGGEKQRGQESQPIVYDGVMYITGSYSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P854</accession>
    <name>A0A2M9P854_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001519">
        <property type="protein sequence ID" value="PJN93721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7478" checksum="4DAE147C411050F0" modified="2018-04-25" version="1">MTDWTETELSALRRAYASGTTRVSYDGKSVDYGSAEDLLARIRTIERAIAGTTRPLPVAGLAGFSRGDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P861</accession>
    <name>A0A2M9P861_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Tryptophan--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">trpS</name>
        <name evidence="9" type="ORF">CNY89_18775</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.2" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001506">
        <property type="protein sequence ID" value="PJN93732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004830">
        <property type="term" value="F:tryptophan-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006436">
        <property type="term" value="P:tryptophanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00806">
        <property type="entry name" value="TrpRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002305">
        <property type="entry name" value="aa-tRNA-synth_Ic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002306">
        <property type="entry name" value="Trp-tRNA-ligase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00579">
        <property type="entry name" value="tRNA-synt_1b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01039">
        <property type="entry name" value="TRNASYNTHTRP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00233">
        <property type="entry name" value="trpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="22067" checksum="FB799CFB9D921A33" modified="2018-04-25" version="1" fragment="single">MTEPKFTPRVFSGIQPSGSLHLGNYLGALRRFARMQDDGVETIYCVVDLHAVTVWQDPADLARATRELTAAYIASGLDPEKSILFNQSQVPAHAELAWLFNCVARVGWMYRMTQFKDKAGKNAENSSLGLLAYPALMAADILAYHATHVPVGEDQKQHIELTRDIAAKFNHDYGVDFFPITEPVIEGVATRVMSLRDGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P882</accession>
    <name>A0A2M9P882_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01001505">
        <property type="protein sequence ID" value="PJN93733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="2"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="26016" checksum="754A30A6212E1B0B" modified="2018-04-25" version="1" fragment="single">PRTKWFIFNSPSNPTGAGYDADQLRALTEVLLAHPHVWVMSDDMYEHIVYPPFVFASPAEVEPRLLPRTLTVNGVSKAYAMTGWRIGYAAGPRDLIRAMVTIQGQSTSNAASISQWAAVAALTGPQDYIPDAAHAFLRRRDLVVEMLNRAPGIQCPTPEGAFYVYPSVAGLIGAATPEGRVIATDEDFCRELLEAEGVAVVFGAAFGGSPNFRLSYAASDDQLIDACLRIERFARSLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P898</accession>
    <name>A0A2M9P898_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001476">
        <property type="protein sequence ID" value="PJN93765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="26195" checksum="56B28ECBEC98C40C" modified="2018-04-25" version="1" fragment="single">SSLPPLRLAVRANRYEIAERLLAAGASPAAGDPVVGHDALSDLTAQQRLLAATETSVPAALTSLLARLGAPPGGENRTSASFLAEPSEPAWSGWRFVPYDAVGTYARVLHTLDAAATPVIRCPNASGVHFRSTRAFISRVCRANVGSSPRAVFLLVLPGKTLWLDGASQPIFQANALLGLQLTVDTALDYLRFFCFFVRSQGAPFYVVEDPGDPNLAELRRTRPELVESIARPASLETGVDGIFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A2</accession>
    <name>A0A2M9P8A2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Replication initiation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001483">
        <property type="protein sequence ID" value="PJN93759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9635" checksum="9B1F6E564FBFD68A" modified="2018-04-25" version="1" fragment="single">EAPPPMAVQRAAKATWERFPDGRLNYGATEEAAREIALRHGGGWDVNLIAAAYREQMGARLDALSGSKLEKSWKGFCEAFFARRGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L0</accession>
    <name>A0A2M9P8L0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001394">
        <property type="protein sequence ID" value="PJN93860.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93860.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="22321" checksum="2093AB3B0DB151B4" modified="2018-04-25" version="1" fragment="single">MSDDVTAKLIVMDTGPLITLAAADNLDYLTYPKLPIYVPDAVFYEATRDADMLGAQQVMDWAQKRPGQVNVIPTEAFANFLQESGGRRGRYREKDLGERAALEAIHDAVQLRSNERAILITEDDRVLRQALVFQPELTDRMIPITTRDFLEGLEQAQRIQSVEAVYRRAEDAGRHASQRQALAQQHEKAVTAVQSVLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N4</accession>
    <name>A0A2M9P8N4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ornithine cyclodeaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001368">
        <property type="protein sequence ID" value="PJN93893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15514" checksum="1991F5AA736C7538" modified="2018-04-25" version="1" fragment="single">ARALADRLGATAVPDLPEAVAEADVIATATMATEPILQGAWLRPGQHLDLIGAYRSDMREADDACLTRSRIFVDSYETTLPHIGELKDPLARGVIARADVLGDLRALVAGEAGRETPEEITLFKNGGGAHLDLMTGRAILAAWRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V3</accession>
    <name>A0A2M9P8V3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17310</name>
        <name evidence="1" type="ORF">CNY89_27420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003726">
        <property type="protein sequence ID" value="PJN92700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001305">
        <property type="protein sequence ID" value="PJN93961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6509" checksum="14D8E0C3BBE6503B" modified="2018-04-25" version="1" fragment="single">MELYRKVRLACRDGMSERAAARHFGISRESVKKMLSFSVPPGYRRRAEIKRPKLDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W0</accession>
    <name>A0A2M9P8W0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CarD family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001303">
        <property type="protein sequence ID" value="PJN93964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1290">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036101">
        <property type="entry name" value="CarD-like/TRCF_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003711">
        <property type="entry name" value="CarD-like/TRCF_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042215">
        <property type="entry name" value="CarD-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02559">
        <property type="entry name" value="CarD_CdnL_TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01058">
        <property type="entry name" value="CarD_TRCF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141259">
        <property type="entry name" value="SSF141259"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CarD_TRCF" evidence="1">
        <location>
            <begin position="9"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="171" mass="19134" checksum="24CE6A90FC71D26C" modified="2018-04-25" version="1">MSKVKKASEFRPNDFVVYPAHGVGRIISIDEQEVAAIRLEMFVISFEKDKMTLRVPTAKAGAVGMRPLSSADIVGKAMETLKGRARVKRAMWSRRAQEYEQKINSGDLVSIAEVVRDLHRADDQREQSYSERQLYEAALERLTREVAAVDGIEETKAQKLVDEVLGGRVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y0</accession>
    <name>A0A2M9P8Y0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17120</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001282">
        <property type="protein sequence ID" value="PJN93995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014935621" evidence="2">
        <location>
            <begin position="20"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="24493" checksum="1F50A1185A03B827" modified="2018-04-25" version="1" fragment="single">MRILALAGVVGLYAGVAFAQDYPTQPITIVVPFSAGGPTDTVTRLVAEPMSKALGQQVVVQNVGGAGGTLGAAQVAKAQADGYTLLLHHIGMSTAPSLYDNLTFDPVTDFAPIGLVTNVPMTIIARKDFEPDTLAELVDYVKANADTVTLANAGIGAASHLCGMLFMDAIDTPLTSVPYQGTGPAMTDLIGGQVDFMCDQTTNTTGQIAAGAVKAYAVTTPERLAALPDLPTTAEAGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y8</accession>
    <name>A0A2M9P8Y8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Nitrilase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17050</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001273">
        <property type="protein sequence ID" value="PJN94006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000257">
        <property type="term" value="F:nitrilase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07564">
        <property type="entry name" value="nitrilases_CHs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003010">
        <property type="entry name" value="C-N_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000132">
        <property type="entry name" value="Nitrilase/CN_hydratase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044149">
        <property type="entry name" value="Nitrilases_CHs"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46044">
        <property type="entry name" value="PTHR46044"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00795">
        <property type="entry name" value="CN_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50263">
        <property type="entry name" value="CN_HYDROLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00920">
        <property type="entry name" value="NITRIL_CHT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CN hydrolase" evidence="3">
        <location>
            <begin position="2"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="30729" checksum="173DAEED6FC0D4C0" modified="2018-04-25" version="1" fragment="single">MTKVAVVQRPPVYLNLSSSMERAVDLIAEAAHQGAHLVVFPETWLPGYPTFVWRLAPGAGMAKTDVLFALSQANSVNRSKGGLAPLQEAAKEHGVVVVVGYQEIDGAVSGSTLFNSCAIIDADGRLANNHRKLMPTNPERMIWGFGDGSGLNVVETAVGRLGTLICWENYMPLARYALYAQNIEIYVAPTWDSGDTWLATMQHIAREGGCWVIGCATALEAKDIPDDVPYQDELFPNKDEWVNQGDAVVYAPFGGVFAGPMRKEKGFLFAEIDVAAAKASRRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P904</accession>
    <name>A0A2M9P904_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16960</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001260">
        <property type="protein sequence ID" value="PJN94024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH crp-type" evidence="2">
        <location>
            <begin position="80"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="20586" checksum="6FC599EEB57EBCBB" modified="2018-04-25" version="1" fragment="single">GDRQLLSIQIPGDFVDLHGYPLKALDHDVATMTDAQVAIVPHAEIDRIIAAHPSLARKLWFATLLDAALHREWIFKLGRLPAQGRVAHFLCETELRLRAVDLSNGVSFELPLTQSDIAEICGLTSIHVNRVLRDLRERGLCTLRGGIVEIQDRASLVRVGEFDPGYLYLDPAFAGAGDSRRRKTSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P920</accession>
    <name>A0A2M9P920_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16975</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the bacterial solute-binding protein 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001262">
        <property type="protein sequence ID" value="PJN94020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018313">
        <property type="entry name" value="SBP_3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01039">
        <property type="entry name" value="SBP_BACTERIAL_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014598736" evidence="5">
        <location>
            <begin position="24"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="6">
        <location>
            <begin position="35"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="212"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010333"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="246" mass="25773" checksum="DB8AC3B5F2C5B12E" modified="2018-04-25" version="1" fragment="single">MRRRPFLALLSALGLLASGLPAAADTLADIKEAGVLRVAVPQDFPPFGSAGLDMTPMGYDIDMANAIAERLGVKAELTAVTSANRVPYLQTDRVDLVISSLGRNAERELVIDFSDAYAPFYNGIFGDAELALTDVAGLDGKSVGVTRGSVEDLALTEMAPDGAAINRYEDNNGTISAFLSGQVDVIATGNVVAAAIIERNPPRTPELKFLVKNSSTGTRSGSTSPRRALAGSAKSRACSAVRMVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P969</accession>
    <name>A0A2M9P969_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001206">
        <property type="protein sequence ID" value="PJN94098.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94098.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5414" checksum="2100B6E9F489EDB5" modified="2018-04-25" version="1" fragment="single">MISTQPASPADRQRALWLSTIAFTACFAVWMIFSIIGLSIREQLGLSQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P970</accession>
    <name>A0A2M9P970_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitronate monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001217">
        <property type="protein sequence ID" value="PJN94083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018580">
        <property type="term" value="F:nitronate monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04730">
        <property type="entry name" value="NPD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004136">
        <property type="entry name" value="NMO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03060">
        <property type="entry name" value="NMO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NMO" evidence="1">
        <location>
            <begin position="12"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="243" mass="25216" checksum="07FF3C10B68FBD39" modified="2018-04-25" version="1" fragment="single">MPLPDTLIGRLRLPVVAAPMFLASGPDLVAECCNAGVLGTFPALNQRSTPGLNAWIDEIEARLDPGAAPFGVNLIVHRSNPRLEADLEVVVRRKVPVVVTSLGAVRDLVTAVQSYGGLVFHDVISRRHAEKAAEAGVDGIIAVCAGAGGHAGTLSPFALVPEIRQVFDGTILLAGAMSTGAHVLAARALGADLAYLGTRFLATREAMASPAQKEMMLAARAGDVVYTPNVSGVHANFLAASLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P982</accession>
    <name>A0A2M9P982_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001218">
        <property type="protein sequence ID" value="PJN94080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6992" checksum="B5A36FAE7C0C1348" modified="2018-04-25" version="1" fragment="single">PLPPDQMTAAERRAELCGLLALGLVRLLRQDGREVSDNTGERCLHYPDDQCRHATPTHRRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B5</accession>
    <name>A0A2M9P9B5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001176">
        <property type="protein sequence ID" value="PJN94137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021327">
        <property type="entry name" value="DUF2934"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11154">
        <property type="entry name" value="DUF2934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7396" checksum="EDA9540BD7E0AEF0" modified="2018-04-25" version="1" fragment="single">MWEKNAISEEAIARRAHEIWEREGRPDGRSQDHWEQARIELAEAASINPDPSVEGAEAILSDEAIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C9</accession>
    <name>A0A2M9P9C9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">EVE domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001171">
        <property type="protein sequence ID" value="PJN94148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002740">
        <property type="entry name" value="EVE_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01878">
        <property type="entry name" value="EVE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EVE" evidence="1">
        <location>
            <begin position="2"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15351" checksum="26360C74F813F542" modified="2018-04-25" version="1">MAFWLFKSEPDAWSWDQQVARGAAGQEWDGVRNYQARNNMRAMAVGDLGFFYHSNIERAVVGVVEVIAPAHPDSTAEDPRWDCVDIRAVAAFPRPVTLDACKAEPRLASMVLVVNSRLSVQPVTAQEWAVVCEMGGYPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E5</accession>
    <name>A0A2M9P9E5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001156">
        <property type="protein sequence ID" value="PJN94167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11224" checksum="B38AC89E6F5F0EE0" modified="2018-04-25" version="1">MTISAIEPGRADEDRLERNLVLYRDLSVALQEKITVIKAGGGDADCKDVLDALKAHQRALQTVLELEAGLVKKNRSWTDGGGGELDLAAARAEILARLAAWAGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K0</accession>
    <name>A0A2M9P9K0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15860</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001124">
        <property type="protein sequence ID" value="PJN94210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="144"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="35815" checksum="1A7BE22EC35A7F1C" modified="2018-04-25" version="1" fragment="single">GSREPAAEARGVRSDAGQDDPCGGCPGKLLSLSRRRRCIDTVRQTLGVSERRACRTLGQRRSTRRKAPCGLPDEERLTEDIIELARSHGRYGYRMATGMVNNAGWHVNHKRVERIWRREGLKVPQKQAKKGRLWLNDGSCVRLRPERPNPVWSYDFVQDRTHDGRLFRTLNIMDDFMKEALAIRVQRKLKSTDVVDALTDLFIMRGPPEFIRSDNGAEFIAEKVRGWIGAVGARTAFIEPGSPWENGYCESFNSRFRDELLNGEIFFSLREAQILIEQWRRHYNTPRPHSALGYRPPAPESFVPVHPKPTMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L7</accession>
    <name>A0A2M9P9L7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fructose-bisphosphatase</fullName>
            <ecNumber evidence="3">3.1.3.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">glpX</name>
        <name evidence="6" type="ORF">CNY89_15685</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FBPase class 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001103">
        <property type="protein sequence ID" value="PJN94238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006071">
        <property type="term" value="P:glycerol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01516">
        <property type="entry name" value="FBPase_glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004464">
        <property type="entry name" value="FBPase_class-2/SBPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30447">
        <property type="entry name" value="PTHR30447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03320">
        <property type="entry name" value="FBPase_glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004532">
        <property type="entry name" value="GlpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00330">
        <property type="entry name" value="glpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="79"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="156"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="178"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="110"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="203"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="206"/>
        </location>
        <ligand>
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR004532-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR004532-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="305" mass="32296" checksum="7A15BEFBC6B9E6F1" modified="2018-04-25" version="1" fragment="single">ARVSEQAAIAAAKLVGHGDEKAADQAAVDAMRTQLNLLDIQGVVVIGEGERDEAPMLYIGEEVGTGKGPGVDIALDPLEGTTLCAKDMPNSLAVIAIGPRGSMLHAPDVYMDKLAIGPGYAKDVVSLDMTPTERIQALAKAKGTGVDGIMVCVLERPRHEDLIAEIRATGARIRLITDGDVAGVIHCAEAAKTGIDMYMGSGGAPEGVLAAAALKCMGGQMWGKLLFRNDDERGRAAKAGITDLDRIYARDELVTADVIFSATGVTDGSIVQGARRDGEWLETETILMRSKTGSLRRILYRQRNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P8</accession>
    <name>A0A2M9P9P8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acetoin utilization protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001083">
        <property type="protein sequence ID" value="PJN94265.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.800.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037138">
        <property type="entry name" value="His_deacetylse_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94265.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9704" checksum="1594460706B49C31" modified="2018-04-25" version="1" fragment="single">MTTALISHPDCLLHVNPPGHPERVERLKAVLSMLEAEEFAYLVRVDAPLAEDAQLLRVHPAAHLAILAGRVPNEGFAAIDGDTFLCPGTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R2</accession>
    <name>A0A2M9P9R2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15605</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001093">
        <property type="protein sequence ID" value="PJN94252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025738">
        <property type="entry name" value="BatD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40940">
        <property type="entry name" value="PTHR40940"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="339"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="367" mass="40767" checksum="251EA1D5B2183264" modified="2018-04-25" version="1" fragment="single">MTDRAELDPARQTPRRRRPRGERDLARDHPRRSGRVPAPAPRRRAPPPPLPRPDPSRGGRPVVRLLVLLLLLPLTAQAESLTLTFVPHPLHDEIVAGEYVPVTLRAVYDRKVAREDLTIAPSDSFDWLQAAPDDWREEMIDGRRWIVMERKLALFPKHAGLLHFGPAAHKLTIIDENSRWVEREVVAHPLTLSVGAFPRERGWKLAAGAVTLTDELSADPSRLADGQTVTRRVTLRAKGVLPEALPPRPVVSEPWLISFAAPVERRLILTEDGPVAEAIWTWQFRPETGEPGVIPPVTIPFFNTETRRMDAVEIAALPIGYASFFTGQVRTGRFATADVLPILGALAAGLGAGLALLLRFRVPETTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S6</accession>
    <name>A0A2M9P9S6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001079">
        <property type="protein sequence ID" value="PJN94272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6976" checksum="3607438B76BB3B1F" modified="2018-04-25" version="1">MQSEPKTRTPLAALALSLAMQAEGKRQRDPDLEIAGQDLAETAVTSHRPQETATDRNEDLSARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U5</accession>
    <name>A0A2M9P9U5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001061">
        <property type="protein sequence ID" value="PJN94299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="22166" checksum="DF84116DF21159F6" modified="2018-04-25" version="1" fragment="single">MTSPPYLRSRLRRGRWFHTYRRGDKEISLKAHGLHPTDPRVFAAYCAEHVRWEEKAASATAPKGGTFAWAVDLYQASDGWKTKLEASTKQNREAIYRRYLKAQGDRPLATITRDDLEAALLAKGGHAAANELKALKPVFAFVHRLKLIPTNPAAGLKLDRPGGEGFPTADAEDIERFQQRWPIGTTERLAFDLAILTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z8</accession>
    <name>A0A2M9P9Z8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-dependent protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001037">
        <property type="protein sequence ID" value="PJN94341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="1">
        <location>
            <begin position="14"/>
            <end position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="24249" checksum="F5994BC9F5ADF236" modified="2018-04-25" version="1">MGRRFSLADLPDCLPVFPLPGALLLPRARLPLNIFEPRYLAMLEDALKTPHRLIGMVQPVVMAEGAAEGRLHRIGCAGRVTGFQETEDGRYQITLTGVCRYRLGPPVEGFAPYRRAKVDWASFERDLGRAEEDPGFDRPAFLAVLARYFETAQLASDWDSLREAEVELLVNSLSILCPFDPEEKQALLEAPTLAERRETLATLMDFAARTGGDEGAMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA13</accession>
    <name>A0A2M9PA13_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate aminotransferase</fullName>
            <ecNumber evidence="2">2.6.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.1" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001027">
        <property type="protein sequence ID" value="PJN94361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004069">
        <property type="term" value="F:L-aspartate:2-oxoglutarate aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="1">
        <location>
            <begin position="32"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="20814" checksum="ADA219DC001010ED" modified="2018-04-25" version="1" fragment="single">MAFLSDALARIKPSPTVAITALARDLRAEGRDIVSLSAGEPDFDTPDHIRAAGKAAIDRGETRYTSPEGIPELRAAIAAKFARENRIAYAPDQVIVTTGGKQALFNALVATLNPGDEVVIPAPYWVSYPDMVRLAGGAPVIVEGRLETGFRITPQALDAAITPRTKWFIFNSPSNPTGAGYDADQLRALTEVLLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA57</accession>
    <name>A0A2M9PA57_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000996">
        <property type="protein sequence ID" value="PJN94412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7957" checksum="3D9B61C9E9A9CCA7" modified="2018-04-25" version="1">MHQNLITEIDEFLAETGLSGYRFGLLAAKNGRLVDRLKGGGRVWPETEAQVLGFIRQRRAERATTNRTGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA64</accession>
    <name>A0A2M9PA64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Patatin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_14605</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000990">
        <property type="protein sequence ID" value="PJN94422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002641">
        <property type="entry name" value="PNPLA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01734">
        <property type="entry name" value="Patatin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51635">
        <property type="entry name" value="PNPLA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="1 2" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNPLA" evidence="3">
        <location>
            <begin position="14"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXGXXG" evidence="2">
        <location>
            <begin position="18"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="GXSXG" evidence="2">
        <location>
            <begin position="46"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="DGA/G" evidence="2">
        <location>
            <begin position="212"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="355" mass="38686" checksum="64C2CEFD625F45D6" modified="2018-04-25" version="1">MSKAPGRTRKVVNLALQGGGAHGAFTWGALDRILEEEAIEIEGISGTSAGAMNAAALKSGMVAGGREGARASLESFWMSIVGGDCALPPLMLDWLAEIAPSPAMTSRALEASPAGLMTEAFTRALSPYQFNPFNYHPMRASVTRLLDYGHVCTGAWPKLFVCATNVRSGKIKVFSGDEITPDALLASACLPTLFQAIEIEDKATGMVEAYWDGGYMGNPPLFPLFYQTSTSDVIIVHINPMRREELPRTSTEILNRINEISFNSSLLQALRSVEFVHRLIQKGLVSHDSMMDVRVHSVQDDALMRQLGVASKTTPNRALLLQLKEAGRQAMDRFLTEHWDNIGVRSSVDLRGMFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA89</accession>
    <name>A0A2M9PA89_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000971">
        <property type="protein sequence ID" value="PJN94447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="28660" checksum="E7F0543B99305330" modified="2018-04-25" version="1" fragment="single">MIAIISTMTGDPWGGSEELWSRTALELVSRGHRVRASVCGWRPLDRRIVALREAGIEIWTRDMPLPVWKKAWRRLVVSRGMDWPWCADIDAFLGATPRPDFVLVNVPANFPPLDLLDRLVERWKFATLSHNNDSQWWPEDAEAQRLNASLARAERCFFVSRRNLELAQDQLGAAIANADMARNPAGVRQDPEISWPAAEEPLRMACVGRLDPRAKGQDLLLHVLSDHRWSDRNWRLAFFGKGPMRHNVER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD9</accession>
    <name>A0A2M9PAD9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14110</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000937">
        <property type="protein sequence ID" value="PJN94506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="102"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="183"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="239"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="67"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="275" mass="30150" checksum="36454BA6DB1B60E3" modified="2018-04-25" version="1">MTSYLKTTAFYLAVAFIVFVAVFPFYYAILTSFKTGTALFEVNYLPRNFDLANYRAILTNGVFPRNVLNSVFVAGVTVAFALLLAVTASYALARVRFRGRGLLLMTILAVSMFPQIAVLAGLFELIRFLGIYNTPWALILSYVIFTLPFTVWVLTTFMRDLPVEIEEAAIVDGATPWVIITRVFLPLLWPALVTTGLLAFIGAWNEFLFALTFTSSETTRTVPVAIALLSGATQHETPWGAIMAASVLVTVPLIVLVLIFQRKIVSGLTAGGVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT4</accession>
    <name>A0A2M9PAT4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA ligase (ATP)</fullName>
            <ecNumber evidence="1">6.5.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ligD</name>
        <name evidence="4" type="ORF">CNY89_13300</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.1" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000855">
        <property type="protein sequence ID" value="PJN94641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003910">
        <property type="term" value="F:DNA ligase (ATP) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012309">
        <property type="entry name" value="DNA_ligase_ATP-dep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012310">
        <property type="entry name" value="DNA_ligase_ATP-dep_cent"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014146">
        <property type="entry name" value="LigD_ligase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014143">
        <property type="entry name" value="NHEJ_ligase_prk"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04679">
        <property type="entry name" value="DNA_ligase_A_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01068">
        <property type="entry name" value="DNA_ligase_A_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02779">
        <property type="entry name" value="NHEJ_ligase_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02776">
        <property type="entry name" value="NHEJ_ligase_prk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50160">
        <property type="entry name" value="DNA_LIGASE_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DNA_LIGASE_A3" evidence="3">
        <location>
            <begin position="96"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="461"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="461" mass="50832" checksum="46BA230C6F2E4098" modified="2018-04-25" version="1" fragment="single">TLVARSPSGARWLHEIKFDGYRLQARIEAGRVRLLTRSGLDWTTRFGKPVVAALRELPVATAILDGELVVETEAGASDFSALQADLSAGRTDRFVFYVFDLLYLDGYDLRALPLVARKRLLEGLTPGDGGRVRYSGHFEESGAVVLRHACRLSLEGMVSKLRDAPHRPGRGRTWVKSKCAARQEFVVAGYAPSTVSRKAIGSLLLGVYEGDRLRPVGRVGTGFTAAAAEDMLRKLEPLRVSASPFTERLTAEEARQARYVRPELVAEVEFRAWTADGHLRHASFRGLREDKAPQEIVREMPDARAKPPAPQRRRVRLTHPDRVYWPDAGVTKEGLADYYAAIWRHVAPHVVGRPLALLRCPTGIDGERFFQKHAWKGLDPHILQATDPKDPSGAPLIGVSDLDGLMGLVQAAALEIHPWGASLADWERPDRIVMDLDPGEGVPWEAVIAAAGEVRARLEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB61</accession>
    <name>A0A2M9PB61_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000780">
        <property type="protein sequence ID" value="PJN94773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="8031" checksum="691606273EF94B0E" modified="2018-04-25" version="1">MAERAIRTLKEQLLWVRHFDTVEELRLALADGAALYNATWLRERHGHKTPDQIRAEHLGLETGAATVKLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB81</accession>
    <name>A0A2M9PB81_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YjgF_endoribonc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000772">
        <property type="protein sequence ID" value="PJN94788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02199">
        <property type="entry name" value="YjgF_YER057c_UK114_like_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013813">
        <property type="entry name" value="Endoribo_LPSP/chorism_mut-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14588">
        <property type="entry name" value="YjgF_endoribonc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YjgF_endoribonc" evidence="1">
        <location>
            <begin position="5"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="15461" checksum="ADD01716184303E8" modified="2018-04-25" version="1">MSVIESRLAELGVTLPDAPAPAANYVPYVVSGDTVYVSGQVSAGPDGLITGKVGADLDVAQAAAAAKACAISLIAQAKKAAGGDLDRLRVVKLVGFVNSTPEFTDQPKVINGASDFFVEVFGDKGRHARSAVSAGSLPFGVAVEIEAIFELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM4</accession>
    <name>A0A2M9PBM4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">50S ribosomal protein L11 methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000687">
        <property type="protein sequence ID" value="PJN94934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11535" checksum="2BE7156AF9476CB2" modified="2018-04-25" version="1" fragment="single">PLATSTARENVAANGLSGRIRCVTSAGFRHPVLARSGPYGLIFANILAGPLKTLAPQLAAHQAPGGVAILSGLLARQAQSVLAVYAGWGYRRIDFVRIGEWMTLVLRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN6</accession>
    <name>A0A2M9PBN6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000679">
        <property type="protein sequence ID" value="PJN94948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="21518" checksum="388A2D2424FE0C95" modified="2018-04-25" version="1" fragment="single">MSGPGLHSRIVTILKLGLPLIAVAMLAGLFLNSQDGRGGGELVFSPADLELLGEGMQVSRPVFSGVTDGLDRFRFTAETVTPDAAPPTRATIQTLSGRIEFSGGTQIDLKSETADVDLKTRRMTLQGGVEAQTGDGYVFRAKEAQVDLDLGGLTAEGSVSGDGPMGRIDARSLAVSPPRGDDKARTFLFQDDVRVVYAPPAPTGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS6</accession>
    <name>A0A2M9PBS6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000662">
        <property type="protein sequence ID" value="PJN94985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="10396" checksum="B0379DBC1A0C31D7" modified="2018-04-25" version="1" fragment="single">MTAFAAHLLIQEGQKNIARRLRTYAITGVSVLPIAMSLGLAVSMAANLISYGSGSGGTIGGQQISIGVGGSGITETVLTVLGGLSPLLLVVAYGSALGISFYIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ4</accession>
    <name>A0A2M9PBZ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1737 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000621">
        <property type="protein sequence ID" value="PJN95070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013619">
        <property type="entry name" value="DUF1737"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08410">
        <property type="entry name" value="DUF1737"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1737" evidence="1">
        <location>
            <begin position="6"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08410"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7537" checksum="4CA57DEDB16109B1" modified="2018-04-25" version="1">MRATLIYRYLTGPDTSEFCHKVTAALAKGWSLHGGASYAFDAATGQMRCGQAVVKEVDLAYDPALKLGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC27</accession>
    <name>A0A2M9PC27_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">UPF0114 protein CNY89_10490</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10490</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the UPF0114 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000606">
        <property type="protein sequence ID" value="PJN95100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00143">
        <property type="entry name" value="UPF0114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005134">
        <property type="entry name" value="UPF0114"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020761">
        <property type="entry name" value="UPF0114_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38596">
        <property type="entry name" value="PTHR38596"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03350">
        <property type="entry name" value="UPF0114"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00645">
        <property type="entry name" value="HI0507"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005774"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="19654" checksum="882470D52FAD3CDF" modified="2018-04-25" version="1">MKSGLETQFERSLFAARWLMAPMYLGLVISLGMLLVVFVREAAYYVPQALVMRSDDAILAILTLIDLTLAANLLVIVLFSGYENFVSKLNLPETQDRPDWMGKVDFSGLKLKLVASIVAISGIHLLKRFMEIGEVGSQTPFDPLQLRWMVVIHLTFVASGVLLALMDWINARSDAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC52</accession>
    <name>A0A2M9PC52_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">L,D-transpeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_10610</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000615">
        <property type="protein sequence ID" value="PJN95082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014819033" evidence="4">
        <location>
            <begin position="27"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="YkuD" evidence="5">
        <location>
            <begin position="79"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="23264" checksum="3E5A2F2090AA8B9B" modified="2018-04-25" version="1">MTGLRPRALLLAGLLAVGCAPTDLLASLDPPKEAQPADLAVYAARMDGDRMLPAIEAERFPPSLLRTRVPYETVEAPGTVVIDTAAHQLFLVEPDGWATRYGVAIGKEGFGWTGTGTIDRNARWPRWTPPPEMIARNPSLEKWKDGMPGGLDNPLGARALYIYFDGADSGFRIHGTNEPFSIGRSASSGCFRMLNQDVIDLYDRVQKGAKVIVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC63</accession>
    <name>A0A2M9PC63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000595">
        <property type="protein sequence ID" value="PJN95119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6643" checksum="3DDF4A565C25D035" modified="2018-04-25" version="1">MRLAEEYDDAQEQGEVAKLGDNLPSVGAVNANKPATAADLGLRRDKIHEARKLRDALWVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA0</accession>
    <name>A0A2M9PCA0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000571">
        <property type="protein sequence ID" value="PJN95175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901137">
        <property type="term" value="P:carbohydrate derivative biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030259">
        <property type="term" value="P:lipid glycosylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004276">
        <property type="entry name" value="GlycoTrans_28_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03033">
        <property type="entry name" value="Glyco_transf_28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_transf_28" evidence="1">
        <location>
            <begin position="9"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5669" checksum="83F435B591E5D43E" modified="2018-04-25" version="1" fragment="single">MPDRAPLLVIAAGGTGGHMFPAQALAEEMLARGWRVRLATDSRGARYAGGFPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG0</accession>
    <name>A0A2M9PCG0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cytochrome C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09685</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000541">
        <property type="protein sequence ID" value="PJN95231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="4012" checksum="9805C9C80D36D6A1" modified="2018-04-25" version="1" fragment="single">LEQSEIEAILDYIKSTWPEHIREQQAQRSNAAAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH7</accession>
    <name>A0A2M9PCH7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Omp85 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09735</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000544">
        <property type="protein sequence ID" value="PJN95224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="PTHR12815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1134">Transmembrane beta strand</keyword>
    <feature type="domain" description="Omp85" evidence="4">
        <location>
            <begin position="35"/>
            <end position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="339" mass="36624" checksum="C2E9DC1DD7E0BEC7" modified="2018-04-25" version="1">MTVTVDEGKRRTIGVGATVSTIEGLGVEAFWLHRNLFGRAEQLRFDASVTGMGVTGDGGDFDYTAGVSFTRPGVLRPDVSFVASLGARRLDLDNYREQSVTARVGLQRAFARFLNGELSAFATKARFEDLYGTRNFLMLGVTAKGDYDRRDDKLNPTKGYYAAAEFVPFYEAEYGNVAARGTLEGRVYKGFGEDRRFVLAGRAKIGSYVGPSDRESPPDQLFFAGGAGSIRGYGWRSIGIDAEYDDETGVIGGRSLVEGSGELRVQINERWGGVGFLDGGYVSSSSTFSRSDSDLRFGAGVGARYFTGLGPIRIDVATPLDPLPDSSRIAVYIGIGQAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI7</accession>
    <name>A0A2M9PCI7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Methyltransf_11 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09585</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000532">
        <property type="protein sequence ID" value="PJN95250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013216">
        <property type="entry name" value="Methyltransf_11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08241">
        <property type="entry name" value="Methyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Methyltransf_11" evidence="2">
        <location>
            <begin position="44"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="231"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="246"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="276"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08241"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="308" mass="34177" checksum="D692BE007B2A4006" modified="2018-04-25" version="1">MEIESVASSYRRWAPVYDETFGAFTRLGRRKLVRHVNRRAGSVLEVGVGTGLSLPGYAAHLRVTGVDFSADMLERARTRVAEKKLSHVDSLLRMDARELDFPDDHFDTVVAMHLISVVPEPERVMAEMARVCKPGGEVLILNHFLHEKGALAALGRTLAPLANHLGWHSDFPIERALTSDAQEDDIAKPGHPWPRRHGNRPFRHALARCRTRRLPRPGAGCGEICCGTKAARSAGSTSRHKNAIDAAPLGRGRDWRRARGAIVTRGAETRRPTSRSGRRTLRAGRRRRRRGPGRPRAAGPRRSARHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM0</accession>
    <name>A0A2M9PCM0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 7">dTDP-4-dehydrorhamnose 3,5-epimerase</fullName>
            <ecNumber evidence="3 7">5.1.3.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Thymidine diphospho-4-keto-rhamnose 3,5-epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rfbC</name>
        <name evidence="8" type="ORF">CNY89_09580</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 7">Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-L-rhamnose</text>
            <dbReference type="Rhea" id="RHEA:16969"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="5.1.3.13"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Carbohydrate biosynthesis; dTDP-L-rhamnose biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.13" evidence="3 7"/>
    <dbReference type="EMBL" id="PHNO01000531">
        <property type="protein sequence ID" value="PJN95252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00124"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008830">
        <property type="term" value="F:dTDP-4-dehydrorhamnose 3,5-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019305">
        <property type="term" value="P:dTDP-rhamnose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000888">
        <property type="entry name" value="dTDP_sugar_isom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21047">
        <property type="entry name" value="PTHR21047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00908">
        <property type="entry name" value="dTDP_sugar_isom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01221">
        <property type="entry name" value="rmlC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="133"/>
        </location>
    </feature>
    <feature type="site" description="Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose" evidence="6">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15840" checksum="065DE05CA0346C97" modified="2018-04-25" version="1" fragment="single">MARREISEIAGLILVEPKKFGDHRGFFSETYNRERMAALGFEREFIQDNHALSGEAGTLRGVHYQSPPFAQDKLVRVVRGRILDVAVDIRKGSPTYGDHAAVELSAENWRQLLVPAGFGHGYLTLEPGTEVIYKVTQPYAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV9</accession>
    <name>A0A2M9PCV9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">50S ribosomal protein L6</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000475">
        <property type="protein sequence ID" value="PJN95380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.930.12">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036789">
        <property type="entry name" value="Ribosomal_L6_a/b-dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56053">
        <property type="entry name" value="SSF56053"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3362" checksum="63E6E66AA69042AF" modified="2018-04-25" version="1" fragment="single">MSRIGKKPIDLPGGVTATLSGQAIEVKGPKGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD05</accession>
    <name>A0A2M9PD05_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">3-dehydroquinate dehydratase</fullName>
            <ecNumber evidence="6">4.2.1.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_08675</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes a trans-dehydration via an enolate intermediate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000464">
        <property type="protein sequence ID" value="PJN95408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018509">
        <property type="entry name" value="DHquinase_II_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01029">
        <property type="entry name" value="DEHYDROQUINASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="3160" checksum="187B25540B5D2CAD" modified="2018-04-25" version="1" fragment="single">METPKILCLNGPNLNMLGVREPELYGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD76</accession>
    <name>A0A2M9PD76_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08200</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000430">
        <property type="protein sequence ID" value="PJN95490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015159">
        <property type="term" value="F:polysaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003715">
        <property type="entry name" value="Poly_export"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019554">
        <property type="entry name" value="Soluble_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02563">
        <property type="entry name" value="Poly_export"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10531">
        <property type="entry name" value="SLBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014987236" evidence="2">
        <location>
            <begin position="20"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="SLBB" evidence="3">
        <location>
            <begin position="112"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="305"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="305" mass="32964" checksum="588925E1ED7673B5" modified="2018-04-25" version="1" fragment="single">MAAAILCLASSLAPPRAAAEAYVYALGPQDRIRVKIYEWRASRDTIFEWTALNDVFAVGADGVLALPFAGRIPAEGLGTEALAGAIAQNLVRNMGLGQAPDVAVEIVEFRPFYILGDVAQPGEFPYRPGLNVLKAVSLAGGLPPRRDPDRLEREIFAARGDVSQLSLSRASLLARRARLQAESAGAAEIAFPAELTRHTADEAAAILMEQEGILFRTRREGMATQLRALDELRSFLEREIDSLGRQIGFLDGQVASVEKELASVSALVDQGLAALEAIHDAVQLRSNERAILITEDDRVLRQALV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA7</accession>
    <name>A0A2M9PDA7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 9">Purine nucleoside phosphorylase</fullName>
            <ecNumber evidence="6 9">2.4.2.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8 9">Inosine-guanosine phosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_08105</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. Cleaves guanosine, inosine, 2'-deoxyguanosine and 2'-deoxyinosine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a purine 2'-deoxy-D-ribonucleoside + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + a purine nucleobase</text>
            <dbReference type="Rhea" id="RHEA:36431"/>
            <dbReference type="ChEBI" id="CHEBI:26386"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57259"/>
            <dbReference type="ChEBI" id="CHEBI:142361"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Purine metabolism; purine nucleoside salvage.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9">Belongs to the PNP/MTAP phosphorylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.1" evidence="6 9"/>
    <dbReference type="EMBL" id="PHNO01000424">
        <property type="protein sequence ID" value="PJN95504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00606"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004731">
        <property type="term" value="F:purine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09009">
        <property type="entry name" value="PNP-EcPNPII_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000845">
        <property type="entry name" value="Nucleoside_phosphorylase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011269">
        <property type="entry name" value="PUNP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011268">
        <property type="entry name" value="Purine_phosphorylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11904">
        <property type="entry name" value="PTHR11904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01048">
        <property type="entry name" value="PNP_UDP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000477">
        <property type="entry name" value="PurNPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01697">
        <property type="entry name" value="PNPH-PUNA-XAPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01698">
        <property type="entry name" value="PUNP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PNP_UDP_1" evidence="11">
        <location>
            <begin position="18"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphate binding" evidence="10">
        <location>
            <begin position="74"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="24"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="183"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>a purine D-ribonucleoside</name>
            <dbReference type="ChEBI" id="CHEBI:142355"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002678"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00011886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00031036"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000477-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="27453" checksum="79CCB09A2C34E3D0" modified="2018-04-25" version="1">MEALKIALDRAGVEPVAVGLVLGSGLAGVADLVEGVSIPYADLPGFPHAGVSGHKAALVVGQLEGVRVAVFGGRAHYYESGDAGVMRGPLTLLQRLGADRLILTNAAGSLRPDILPGDLMMLSDHINFSGRNPLIGEPSEARFVNMTEAYDPDLRADLRAAAEAEEVALAEGVYAWYSGPSFETPAEIRAIRSLGADAVGMSTVPEAILGNFLGLRVAAVSTITNMGAGLSDEAISHEHTKAMAPVGAAKFERVLRRYLRGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV0</accession>
    <name>A0A2M9PDV0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Branched-chain amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000344">
        <property type="protein sequence ID" value="PJN95693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13582" checksum="01F4B41B0C1164A6" modified="2018-04-25" version="1" fragment="single">HEAWGATQWQTRFEREARRTARPEDYQVWMGLRVLGEAATRTQGGDYAAIREFVLSPEFSLAAFKGQKLTFRDWDGQLRQPVLLSADTVVASVSPQAEFLHQVSQLDTLGIDRAESACKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY2</accession>
    <name>A0A2M9PDY2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">(S)-2-haloacid dehalogenase</fullName>
            <ecNumber evidence="1">3.8.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">2-haloalkanoic acid dehalogenase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Halocarboxylic acid halidohydrolase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">L-2-haloacid dehalogenase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the hydrolytic dehalogenation of small (S)-2-haloalkanoic acids to yield the corresponding (R)-2-hydroxyalkanoic acids.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>an (S)-2-haloacid + H2O = a (2R)-2-hydroxycarboxylate + a halide anion + H(+)</text>
            <dbReference type="Rhea" id="RHEA:11192"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16042"/>
            <dbReference type="ChEBI" id="CHEBI:58314"/>
            <dbReference type="ChEBI" id="CHEBI:137405"/>
            <dbReference type="EC" id="3.8.1.2"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the HAD-like hydrolase superfamily. S-2-haloalkanoic acid dehalogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.8.1.2" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000314">
        <property type="protein sequence ID" value="PJN95765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018784">
        <property type="term" value="F:(S)-2-haloacid dehalogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006328">
        <property type="entry name" value="2-HAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00413">
        <property type="entry name" value="HADHALOGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01493">
        <property type="entry name" value="HAD-SF-IA-v2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01428">
        <property type="entry name" value="HAD_type_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU368077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25651" checksum="8C3BB5E2EE240AB7" modified="2018-04-25" version="1">MSTFRPKFISFDCYGTLTNFRMAQVAREIYAGRLTPAQMEAFVEAFRGYRLDEVVGAWKPYAEVCHNAVERSCKRIGTAFDPAEARRFYDAVPTWGPHPDVTAGLLPIADRIPLVILSNAMNSQIHDNVTLLGAPFAHVLTAEDAQAYKPRYQAFEHMFDTLNAGPEDFLHVSSSFRYDLMTAYDLKMGRRVWVNRGHEPRVDAAYGYVEIPDIGGLAALVGIAAPATSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE01</accession>
    <name>A0A2M9PE01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA repair protein RecO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000311">
        <property type="protein sequence ID" value="PJN95771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037278">
        <property type="entry name" value="ARFGAP/RecO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003717">
        <property type="entry name" value="RecO"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02565">
        <property type="entry name" value="RecO_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57863">
        <property type="entry name" value="SSF57863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13290" checksum="AE96CCCFB77377C1" modified="2018-04-25" version="1" fragment="single">GLGQRPGWRAEYARWEIMLLAELGFGLDLGRCAVTGSAEDLTFVSPRTGRAVSRDAAGPWADRLLPLPAFLRDPEVVAEDAELAQALALSGHFLEVWLAPTLTREKLPDARPRAAAALLRCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE99</accession>
    <name>A0A2M9PE99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Nitrate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_05975</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000278">
        <property type="protein sequence ID" value="PJN95869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="124"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="157"/>
            <end position="183"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="204"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="83"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="290" mass="31354" checksum="BD033D8A01D14784" modified="2018-04-25" version="1" fragment="single">ALFLVAWGQLAPRVDTSLGALPGPRQVWEQAVALNADYVRESEKEAAFYERQAARNAELTAAGRAEDVKVRDYTGKPTFYAQIWTSIQTVLFGFAIATLFAVPVGILCGLSPTVNLGLTPIIQIFKPVSPLAWLPIVTMVVSAAYTSQDPAFSKSFLVSAITVTLCSLWPTLINTGLGVASIDKDLLNVSRVLKLSTWTKITKLVLPSALPLIFTGLRLSLGVGWMVLIAAEMLAQNPGLGKFVWDEFQNGSSDSLARIMVAVLTIGVIGFLLDRIMFAIQSAVSHTTQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED4</accession>
    <name>A0A2M9PED4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Mechanosensitive ion channel protein MscS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_05710</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000261">
        <property type="protein sequence ID" value="PJN95911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045276">
        <property type="entry name" value="YbiO_bact"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30460">
        <property type="entry name" value="PTHR30460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="33"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="67"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="117"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="160"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="203"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="229"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="431" mass="46234" checksum="733CE2390077E3A2" modified="2018-04-25" version="1" fragment="single">MRRTEYRGPGRAEAFHQPLRRFQRRAGRKPEGVVSGVLVFLAQTWHLVAIVYVAALVLVWWSRPADSLGFMMAATLRSALAVLAGALVMILISRAMSRGVRLPDTTRARLPMLETRLNALAPNLLNALRIVVLIVILGLVAETWGVFDFRGWLSGEAGVAVVQAALSAALILLFAGLVWLAVSSWIEYKLNPTGGRIVSARTGTLLSLLRNAFTVVVVVMTAMLTLSAIGVNIAPLLAGAGVVGLAVGFGAQKLVQDIITGAFIQFENAMNTGDVVSAGGISGVVEKLTIRSVGLRDVSGTYHLIPFSSVDVVSNMMKDFAYHVADIGVAYREDTTQVKALMEEAFQELRAGELGAGIIGPLDMQGVTQLGDSAVTVRARIKTLPGKQWAVGRAFSEIVKRRFDAAGVEMPFPHMTLYFGEDKDGGAPPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE0</accession>
    <name>A0A2M9PEE0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000261">
        <property type="protein sequence ID" value="PJN95909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7702" checksum="263CC9A0312DB07C" modified="2018-04-25" version="1">MRVPSSIRRRSFRAIGGALFPHVLPEERRHALARRRESRRRRFAAASVDVEGRRRSAILLQIAVEGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY9</accession>
    <name>A0A2M9PEY9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000188">
        <property type="protein sequence ID" value="PJN96130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="18"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22893" checksum="CB43CF2DA22EDFEF" modified="2018-04-25" version="1">MQATPTPGPALVSPGDHMLIMIDFQSQMAFATRSIDATLLRNNAGLVAQAAAGFAVPTILTTVAEKSFSGPMFEEVNAPFPGQALLDRTSMNTWEDAAVIARVNKIGRERIVLAGLWTSVCIVGPALSALAQGFEVYVIADACGDVSDEAHERAMQRMIQAGARPMTALQYLLELQRDWARGETYALTTGIARKVGGAYGLGVTYAKTMFGAHEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF78</accession>
    <name>A0A2M9PF78_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DUF2062 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04045</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000172">
        <property type="protein sequence ID" value="PJN96186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018639">
        <property type="entry name" value="DUF2062"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09835">
        <property type="entry name" value="DUF2062"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="46"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="80"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="159"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="domain" description="DUF2062" evidence="3">
        <location>
            <begin position="27"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="208"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF09835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="24011" checksum="283774F2F9D6369C" modified="2018-04-25" version="1" fragment="single">MIFKRRDIPPFLDRAREFVYPRRGWRRAVSYLGHRVRRIPDTPHRIALGFAAGAFVSFSPLFGLHLFYAAALAWALRANIVASLIGTFVGNPLTFPIIAPLALSLGRTMLGHRAKGGDFGSISHAFAQAGEGIRDGVLSLFGRAAPDWGKLGVFFDDLLLPYFIGGLLPGLGAAVLCYLILRPLVAAYQAGGTLQLERRADGAGGRVPADQGRHDLHVSRPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC5</accession>
    <name>A0A2M9PFC5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the AHA1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000155">
        <property type="protein sequence ID" value="PJN96243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013538">
        <property type="entry name" value="Activator_of_Hsp90_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08327">
        <property type="entry name" value="AHSA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="20026" checksum="9B843858E6441C0C" modified="2018-04-25" version="1">MKDFETLDLYGQATDPATLTIQRLLPGPIERVWAYLTESDLRRRWLASGEMTLEVGAPFEFVWRNDELTDPPGERPEAMGGEHRMQSRITEIDPPRRLAFGWTGGGEVSIDLEPRGDRVLLTLIHERAPDRSALLGVGAGWHGHLDVLAARLEGVEPRPFWDAFRQLRAEYEARIPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF4</accession>
    <name>A0A2M9PFF4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8 10">FAD:protein FMN transferase</fullName>
            <ecNumber evidence="2 8 10">2.7.1.180</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Flavin transferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_03665</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>FAD + L-threonyl-[protein] = AMP + FMN-L-threonyl-[protein] + H(+)</text>
            <dbReference type="Rhea" id="RHEA:36847"/>
            <dbReference type="Rhea" id="RHEA-COMP:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:11061"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30013"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:74257"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="2.7.1.180"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="9">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="9">Magnesium. Can also use manganese.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="10">Cell inner membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="8 10">Belongs to the ApbE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.180" evidence="2 8 10"/>
    <dbReference type="EMBL" id="PHNO01000153">
        <property type="protein sequence ID" value="PJN96252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017013">
        <property type="term" value="P:protein flavinylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024932">
        <property type="entry name" value="ApbE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003374">
        <property type="entry name" value="ApbE-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30040">
        <property type="entry name" value="PTHR30040"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02424">
        <property type="entry name" value="ApbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006268">
        <property type="entry name" value="ApbE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143631">
        <property type="entry name" value="SSF143631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="10" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0274">FAD</keyword>
    <keyword evidence="4 8 10" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="10" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="7 8 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 8 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8 10" id="KW-0808">Transferase</keyword>
    <feature type="binding site" evidence="9">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="270"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011955"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR006268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR006268-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="34757" checksum="529387F6EC63FE7F" modified="2018-04-25" version="1">MSKMSTDLVRHALHGPTMGTRWSALFHTAPGFDPAPARAALQAAVDEVDAQMSTWKPGSDLMRLNAAQVGEWVAAPTRLLHVLGVGLEIGRASGGAFDVGMGDAATAWGFGPEAAVPDRIRAAMTAPRRAAYELLDVDTMAGRVRKRAPIALDLNGIAKGYGVDRLAETLIAFGIASALVGIDGEMRANGLRPDGAPWIVAVEAPDRERRAPHSIIALHDAAVATSGDYRHWVDVGGTRFSHTMDPARGGPLAAPPASVTVVAATCVVADAWATALMVRGSLEGAELARRQNVDALFIDREGDQLRETLVGGLFETRSDPGVRPDPGMHS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF5</accession>
    <name>A0A2M9PFF5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000145">
        <property type="protein sequence ID" value="PJN96275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014715341" evidence="2">
        <location>
            <begin position="17"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="66"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15105" checksum="DF4C7679B4F0DE68" modified="2018-04-25" version="1">MSLSLALRGGSAALLAAFVTGCASVEGCDPNAVGNVLTSAACDSGGYYTQRQTNLSANYDRISAAVEEERIAVSQANRRIRDAQAQQRITEAQARTLTGQVASVNSDVDRLARTGDPAAQAALLQKIEQRKQAINGYTDIVVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG6</accession>
    <name>A0A2M9PFG6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000142">
        <property type="protein sequence ID" value="PJN96285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="21"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14479" checksum="0EBF905F2D478D40" modified="2018-04-25" version="1">MRHPVDVHVGKRVRHRRWMVGMTQQQLGDIVGIKFQQIQKYETGMNRISASRLWDIAQALDVSISFFFEGFDEQAGVSADGTTPAVIERGDLLADKEALELVRSYYSIPEAQRRRLFDLARVLSDVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI2</accession>
    <name>A0A2M9PFI2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase family 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03505</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000143">
        <property type="protein sequence ID" value="PJN96282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="91"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="195"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="386" mass="41674" checksum="411ED9C66C7F332D" modified="2018-04-25" version="1">MTDPEGRLAIVTSVVGKSTEISQRRHVNELFGGKTAIVCYSVQPGFTTEKPMLHVTRRPPGLGPRAELEFGKAWNTLRWRASGVPFGEVRRRVEAFLRENRVFAILAEFGHLGSSFAPIGAALGIPVFVYFRGFDASKRLSSPLRVMSYKAALPRLAGYFAVSQSLLDNLAAKGIRHPNSHVIPSGVDTDLFAPAEKDPDLLLAVGRMIPKKSPLTTIAAFASATADFPSRRLEMIGDGPLLEAARAEAAALGVADRVRFLGLQPHDVVREKMARASVFLQHSVVDAEGNEEGLPIAIQEAMASGTVVISTYHAGIPDAVKSGVDGLLVAEGDLDAYTTALRAVLDDDGLRLGLAEAARRRALEQFDTRVLHRKIEGVIRQALAKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ2</accession>
    <name>A0A2M9PFJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LuxR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03390</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000137">
        <property type="protein sequence ID" value="PJN96298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005143">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036693">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03472">
        <property type="entry name" value="Autoind_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75516">
        <property type="entry name" value="SSF75516"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="186"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="28329" checksum="5D80261204CA4EB6" modified="2018-04-25" version="1">MDVLRCPGASTGRSIRLDVQDYTQGLERAETSEALWRLAVAFFASRGVERLAYLHLPPFGAPDAGDTRIRHEGFPLDWIEDYVGKRLYRVDPHAVFSQESTEPFFWRDIAHLKEIAPAEQAYLDMLAEADLGDGLGIQVFGPSGRNGYCGLGIDPEAPHLTDCEIREFQWVCQISHLKYCGLVAAALPRPAPLTPRERDILAWVARGKSNSVIGDVLGISPHTVDTHLRRIYAKLGVSDRISAALAGVGIGLIHSME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL9</accession>
    <name>A0A2M9PFL9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Glucan biosynthesis protein D</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_03070</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism; osmoregulated periplasmic glucan (OPG) biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the OpgD/OpgG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000122">
        <property type="protein sequence ID" value="PJN96350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00637"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016051">
        <property type="term" value="P:carbohydrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014438">
        <property type="entry name" value="Glucan_biosyn_MdoG/MdoD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007444">
        <property type="entry name" value="Glucan_biosyn_MdoG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30504">
        <property type="entry name" value="PTHR30504"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04349">
        <property type="entry name" value="MdoG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006281">
        <property type="entry name" value="MdoG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MdoG" evidence="5">
        <location>
            <begin position="3"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="491" mass="54288" checksum="2CB14CB4AEED414E" modified="2018-04-25" version="1" fragment="single">QPFSWDLLRGMARDLAARPYAPTPIANEALLESIDYDLHNQITYNPDRSLWGADPEAAKVRFFHPGRYFKQPVKIYSLEGGQAQEVVFSPDLFEMPEDHPARGLGGDTGFAGFRVLDPASTNDWMAFLGASYWRTAGYSGQFGMSVRGLAMDAGAPTPEEFPRFTSFWLEKAPDGGLITYALMDSPRATGAYRIATQRNGGGIFQDVDANVFLRGAVDRLGIAPLTSMYWFGKPNRHIAPDWRPEVHDSDGLEILTGSGERIWRPLNNPPRAMTNAFGAEGLKGFGLSQRERSFAEYEDDGVFYEKRASVWVEPKGDWGKGAVMLVELSTNDEIHDNIVAFWRPDTPAAAGTEFMFSYKLNWVETSPEPAVARFTATRLGAGGVPGQPRPENVVKFVVDLEGRGFEGLDRSSGVEAVVEASRGTLGLTVAYPIATQPGWRVMFDLDIGPDDGSDEPIDLRMYVSHDGKALSETWIWQVFPSQLREMLASHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP9</accession>
    <name>A0A2M9PFP9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000139">
        <property type="protein sequence ID" value="PJN96294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6952" checksum="5D6991C620F2B772" modified="2018-04-25" version="1" fragment="single">MIGIEGCAIGFVLLLLLLFIGLHIATALFAVAAVGAWWFFGTTMFQPFGTMMWGTLNNFLLVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY0</accession>
    <name>A0A2M9PFY0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000093">
        <property type="protein sequence ID" value="PJN96453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019088">
        <property type="entry name" value="CHP02186-rel_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09608">
        <property type="entry name" value="Alph_Pro_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="201"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="25106" checksum="670558B9D17298B4" modified="2018-04-25" version="1" fragment="single">TENIALTANFTGSEVLVFGAIRRDAPIPPGQSPIDVVITLSGPERNVVVRRKARRFGIWLNADEIVVRRAPSYYAVAGTGPIGEILSETDRLRYRIGLDQTVRRVGADADVSDVAPFAEALVRLRLQNGLYVNHVDGVDLAQETLFQTTFRLPTNLVEGSYTTDFFLVRDKTVISNGAMTITVQKEGIERWLYNLAQRQPLLYGLMSVAIALAFGWLAAAAFRVARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY8</accession>
    <name>A0A2M9PFY8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Tyr recombinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02395</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000090">
        <property type="protein sequence ID" value="PJN96467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="181"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="22"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="28"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="361" mass="39426" checksum="0B61E8F6B7365AC3" modified="2018-04-25" version="1">MSRPRKPARLWQRPDDGAWIILDGGKQHRTGHSGESGRRAAEDALQEHLAARRQESRSGPAQPSEITVGEVLALYAREVGPTVASPGTLASGIKSLAPFWGGKTCDAVKGSTCRAYERERAKPIEVEYVGKKGGRWTRKLAASSGTVRRELGVLQAALNYAHAEGALIYAPTVTLPETGAPRERWLTKPEAARLLRAAAPHVRRFIVIALATGRRASAILGLRLGMSLDSGWIDTQAGVIHFEGARQRKTKKRRGSVQATASLAAHARRWARLGGSHAIMWRRGPIDEIDTGLLAAARRAGLEGVTPHVLKRTAVTWAFQRGMTLEDAADWFATSPATLMKHYRAHSPLYQSRAKAIMERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG00</accession>
    <name>A0A2M9PG00_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA (cytosine-5-)-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_02385</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:13681"/>
            <dbReference type="Rhea" id="RHEA-COMP:11369"/>
            <dbReference type="Rhea" id="RHEA-COMP:11370"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:85452"/>
            <dbReference type="ChEBI" id="CHEBI:85454"/>
            <dbReference type="EC" id="2.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000090">
        <property type="protein sequence ID" value="PJN96466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001525">
        <property type="entry name" value="C5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00145">
        <property type="entry name" value="DNA_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00105">
        <property type="entry name" value="C5METTRFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00675">
        <property type="entry name" value="dcm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51679">
        <property type="entry name" value="SAM_MT_C5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6 8" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0680">Restriction system</keyword>
    <keyword evidence="6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 6 8" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="6">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="275" mass="29361" checksum="9B1B44447424DE6E" modified="2018-04-25" version="1">MGDARPFTPEALAERPKLALLDLFSGIGGFSLGLERTGGFRTVAFCEIEPYPRRVLAKHWPGVPIYEDVRTLTGDTLARDGIAVDAICGGFPCQDVSSAGPGTGLAGARSGLWSEYARLIEEVSPKFVLIENSAFLRGRGLGDVLRRLDALGYNAEWNCIPAASVGAPHERDRVWIVAAHAASIGCGQGWSRRFADGLSGIPDTPRWNPANTDREPAIGPAISWRECAAWPDEPALLGVGDGVPDRMDRVRALGNAVVPLIPELLGRAIIAAEKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG01</accession>
    <name>A0A2M9PG01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fe-S oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000107">
        <property type="protein sequence ID" value="PJN96404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004017">
        <property type="entry name" value="Cys_rich_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02754">
        <property type="entry name" value="CCG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CCG" evidence="1">
        <location>
            <begin position="9"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16659" checksum="FD269E04169D0FFD" modified="2018-04-25" version="1" fragment="single">MTTASGPRVGLFVTCLVDSIRPSVGFAALRLLEEAGCSVEVPPQQTCCGQPAYNSGDDADAASLARRVIETFEPYDYVVLPSGSCAGSIRHGYPELLAGDPAWAARAERLAAKTHEIMSFLVDVLGFTPEGRRLDATATYHDSCAGLRELGVSAQPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG25</accession>
    <name>A0A2M9PG25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crotonyl-CoA carboxylase/reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ccrA</name>
        <name evidence="2" type="ORF">CNY89_02155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000079">
        <property type="protein sequence ID" value="PJN96501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043880">
        <property type="term" value="F:crotonyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd08246">
        <property type="entry name" value="crotonyl_coA_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010085">
        <property type="entry name" value="Crot_CoA_red"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01751">
        <property type="entry name" value="crot-CoA-red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PKS_ER" evidence="1">
        <location>
            <begin position="47"/>
            <end position="409"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="432" mass="48067" checksum="BEF757889DD9D4D8" modified="2018-04-25" version="1">MAFIDATQSQPDYDAPRKDLYEIGEIPPLGHVPPKMYAWAIRRERHGEPDKSFQLEAVETPKIDSHEVLIFVMGAGVNYNGVWAGLGLPISPFDVHKAPYHIAGSDASGIVWAVGDKVKRWKVGDEIVVHCNQDDGDDEHCNGGDPMFSPSQRIWGYETPDGSFAQFARVQARQLMRRPQHLTWEESACYTLTLATAYRMLFGHEPHELKPGDNVLVWGATGGLGVYAVQLINAAGANAIAVISDESKRDYVQSLGAKGVLNRKDFNCWGQMPTVNTEEYKTWFNEVRKFGKAIWDITGKGVNVDMVFEHPGEATFPVSVFVVKRGGMVVICAGTSGFNLTMDARYLWMHQKRVQGSHFAHLKQAAAANQLMLERRLDPCMSEVFPWEQIPEAHMKMLRNQHKPGNMAVLVGAPTTGLRTFADAIEASRARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG67</accession>
    <name>A0A2M9PG67_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Malate dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 8" type="primary">mdh</name>
        <name evidence="8" type="ORF">CNY89_02325</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the reversible oxidation of malate to oxaloacetate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(S)-malate + NAD(+) = H(+) + NADH + oxaloacetate</text>
            <dbReference type="Rhea" id="RHEA:21432"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the LDH/MDH superfamily. MDH type 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000087">
        <property type="protein sequence ID" value="PJN96474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030060">
        <property type="term" value="F:L-malate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01339">
        <property type="entry name" value="LDH-like_MDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00487">
        <property type="entry name" value="Malate_dehydrog_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001557">
        <property type="entry name" value="L-lactate/malate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022383">
        <property type="entry name" value="Lactate/malate_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001236">
        <property type="entry name" value="Lactate/malate_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015955">
        <property type="entry name" value="Lactate_DH/Glyco_Ohase_4_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011275">
        <property type="entry name" value="Malate_DH_type3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02866">
        <property type="entry name" value="Ldh_1_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00056">
        <property type="entry name" value="Ldh_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000102">
        <property type="entry name" value="Lac_mal_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00086">
        <property type="entry name" value="LLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56327">
        <property type="entry name" value="SSF56327"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01763">
        <property type="entry name" value="MalateDH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="2 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Ldh_1_N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="Ldh_1_C" evidence="7">
        <location>
            <begin position="148"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="2 3">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="10"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <begin position="119"/>
            <end position="121"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2 4">
        <location>
            <position position="152"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000102-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="320" mass="33358" checksum="47D7925FD25709EA" modified="2018-04-25" version="1">MARPKIALIGAGQIGGTLAHLAALKELGDVVLFDIAEGTPQGKALDIAESAPVDGFDAVLKGANDYADIAGADVCIVTAGVARKPGMSRDDLLGINLKVMKSVGEGIAANAPDAFVICITNPLDAMVWALREFSRLPPAKVCGMAGVLDSARFRHFLAEEFQVSVKDVTAFVLGGHGDTMVPLARYSTVAGIPLPDLVAMGWTSQEKLDAIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDQKRVLPCAAHLDGQYGLSGMYVGVPTVIGAGGVEKVVEIKLDKTEKAMFDKSVDSVKGLVEACKAIDSTLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG68</accession>
    <name>A0A2M9PG68_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000069">
        <property type="protein sequence ID" value="PJN96547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10527" checksum="B7CB43A8CE0A1DC1" modified="2018-04-25" version="1">MKLFPGALTRRALEMAAEGGLAPLVYLHPYEFVADRSFHVPMSEMTGMGRGKRAYWAARQAQWHVAGNRGVMGKLRRLARDWRFAGPMKGLLPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH5</accession>
    <name>A0A2M9PGH5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000052">
        <property type="protein sequence ID" value="PJN96622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="101"/>
            <end position="497"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="611" mass="68026" checksum="F3AF7F4FBF202BF7" modified="2018-04-25" version="1" fragment="single">LWSAPAAAQDAARPAGQAAGTTVSHGISTFGDLKYPADFKHFDYVNPDAPKGGTMSFRGTGASQTFDSLNAFILKGEPAQGLGLIYDSLLVGSADEIDAAYGLIAESLEYPEDRSWATFRLRPEARFADGHPLTAEDVVWTYQTLRDKGSPTYRIMLQDVASAEAIDPHTVKFTFKPGVPTRDLPGMVGGLSILPKHYYETVAFEDSTLTPPLGSGQYQIAAVQPGRSIRYCRVPDYWGKDLPVNVGSANFDCYVYEYFGDNTAAFEALKSGQYLFHEEFFSAIWANDYNFPALNKGWVKQETVPDNRPSGTQGFWMNTRREKLKDIRVREAIALMFNFEWSNATLFYGNYERTVSFFQNSPMMAEGLPEGEELATLEKFRDQLPPGIFTEPAYLPPVSSAERNNDRASIRRASALLDEAGWTVGPGGIRRNAAGETLKIEILEDNPSLERVINPFVQNLRQIGVDASLRMVDSAQMEERQKNHDYDVLPGRLVMSMAPSLELRTIYGTQGAEAAGSYNLSGVADPAVDGIIELIVAAKSREELDGRVKALDRVLRAMQIWVPNWSKGSYWLAYWDVFGKPEQPPLYSRGDGYWWFDQAKYDKLKSEGALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN6</accession>
    <name>A0A2M9PGN6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Alpha-E domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000033">
        <property type="protein sequence ID" value="PJN96703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007296">
        <property type="entry name" value="DUF403"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04168">
        <property type="entry name" value="Alpha-E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-E" evidence="1">
        <location>
            <begin position="2"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9179" checksum="09C5391C8C8F11E2" modified="2018-04-25" version="1">MVDLLALDAMNPRAVLYHLSEVQKHVAVLPGAEEESGQMSPLSRAVLRAHAGLAVQEPETLDTVALGALAEEISGLSELISDTYLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW8</accession>
    <name>A0A2M9PGW8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glycoside hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00490</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 25 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000014">
        <property type="protein sequence ID" value="PJN96795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002053">
        <property type="entry name" value="Glyco_hydro_25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018077">
        <property type="entry name" value="Glyco_hydro_fam25_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01183">
        <property type="entry name" value="Glyco_hydro_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00641">
        <property type="entry name" value="Glyco_25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51904">
        <property type="entry name" value="GLYCOSYL_HYDROL_F25_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="270" mass="29904" checksum="E965C257F4A43849" modified="2018-04-25" version="1">MRVLPALALSAAVLAGCGAPAPEVSRSYGAAASLSAVSLPATPPRFDDHKPHDWIGRSPWNYSVHGIDVSKWQGDIDWATVRASGVSFAFIKATEGDDHSDEAFARNWRAAAAAGMPRGAYHFYYFCSTPADQAAWFIRNVPRERGALPPVLDVEWNSHSRTCRRFPAPEIVRAEMRAFLNIVERHYGQRPIIYVTPDFYRDNDLAQMRGATFWLRSVAGHPSEVYPGSDWHFWQYTGTGSVPGVAGRTDINAFAGSPAQWRSWVASHTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH04</accession>
    <name>A0A2M9PH04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000012">
        <property type="protein sequence ID" value="PJN96802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025499">
        <property type="entry name" value="KdgF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029883">
        <property type="entry name" value="KdgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="35"/>
            <end position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11503" checksum="82B4F3408A4424BE" modified="2018-04-25" version="1">MTQTDPRTFPPVDAGHGVIRRVLAERPELMVVEFAFGPEGKGLPHSHPHVQSTYVASGRFAFTVAGETRELGPGDSLVVPPGAVHSCDAIEPGVLIDTFAPRRDDFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH34</accession>
    <name>A0A2M9PH34_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">FkbM family methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00275</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006342">
        <property type="entry name" value="FkbM_mtfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030382">
        <property type="entry name" value="MeTrfase_TRM5/TYW2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02475">
        <property type="entry name" value="Met_10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01444">
        <property type="entry name" value="fkbM_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SAM_MT_TRM5_TYW2" evidence="3">
        <location>
            <begin position="49"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="27010" checksum="26AD4BEF75D74DE5" modified="2018-04-25" version="1">MVDSLSYIFPHEAFQSAELQAGGVRFPHDPAVITPAIRSAILGGVFEAREARRIPEIVTAGDRVLEIGAGIGFISTLLARQEAVETVLAVEANPHLMGYMARLHAANGVRKVRRLNVVLSDGPEPGSATFYLRRDFWMGSLMAGPNPHVGTVDVPTRNFSALLRDEAISLIVCDVEGAEAFLFDDADLSGVDRVFLELHDHLTGLSGVGAVFRTLAAKDFVYDPRHSDGGVVLFRRLRFPEIMRPYAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH70</accession>
    <name>A0A2M9PH70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006672">
        <property type="term" value="P:ceramide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008901">
        <property type="entry name" value="ACER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05875">
        <property type="entry name" value="Ceramidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="162"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="23267" checksum="469CEF22BA2A26F7" modified="2018-04-25" version="1">MDWFRQVNSYCERLDGSYWAEPLNALSNLAFLLAAVLVWPRVRGDGPARLLTGVLAGIGVGSWLFHTHAQVWALYADVIPIQAFILIYVYFATTRFFAAPWWAGAASVAGFLLVAPLVAKAISGAVGPLNGSVGYLPVPILIAGYALALARRAPGTARGLAVGAGILVVSLVFRTIDAAICPVLPIGTHFLWHLLNAVMLGWMILTLTSAKLEAGRAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P475</accession>
    <name>A0A2M9P475_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004893">
        <property type="protein sequence ID" value="PJN92325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7287" checksum="C61E0645D739F8DF" modified="2018-04-25" version="1" fragment="single">ITETVLTVLGGLSPLLLVVAYGSALGISFYIAHRLFISIEVLSAKVSAGVDRFRGVEKLFKEFMGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P482</accession>
    <name>A0A2M9P482_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CP_ATPgrasp_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_30670</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004882">
        <property type="protein sequence ID" value="PJN92328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007302">
        <property type="entry name" value="CP_ATPgrasp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04174">
        <property type="entry name" value="CP_ATPgrasp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CP_ATPgrasp_1" evidence="2">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7776" checksum="966FC2B34339CA42" modified="2018-04-25" version="1" fragment="single">EWRRLERGVKQRARALNAFLYDVYHRAEIIRAVVIFFAMVHTVLSSQNGPADPYTEDRTLSFHPGDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F6</accession>
    <name>A0A2M9P4F6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004649">
        <property type="protein sequence ID" value="PJN92403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7858" checksum="AB60F45ACD483663" modified="2018-04-25" version="1" fragment="single">PIRQPPPFSPAAISATRSCTRNPPVSNRADHLHQRFRLQPIRQPPPFSPAAISATRSCTRNPPVSNRADHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I9</accession>
    <name>A0A2M9P4I9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_29710</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004523">
        <property type="protein sequence ID" value="PJN92439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="39"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8597" checksum="3299894F9709C33E" modified="2018-04-25" version="1" fragment="single">VLVATDIVARGIDVPGVTHVVNYDLPDEPESYVHRIGRTGRNGPRRHRHRGPRHRRAGRHPCRELRPARRAGKLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P2</accession>
    <name>A0A2M9P4P2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004272">
        <property type="protein sequence ID" value="PJN92514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9278" checksum="7BA1995DBBC886CC" modified="2018-04-25" version="1" fragment="single">FPTADAEDIERFQQRWPIGTTERLAFDLAILTGAARADLVKLSRRNIDDDLLSFKRQKTGIKAVVPIRTELRAVIDRTPDIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W9</accession>
    <name>A0A2M9P4W9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004106">
        <property type="protein sequence ID" value="PJN92570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9657" checksum="8083B9284E219114" modified="2018-04-25" version="1" fragment="single">KAVREWIAAVGARTAFIEPGSPWENGYCESFNAKLRDELLNGELFYSLAEARIVLESWRRHYNTLRPHASLGYKPPAPAAISWPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y3</accession>
    <name>A0A2M9P4Y3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Toxic anion resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003978">
        <property type="protein sequence ID" value="PJN92614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008863">
        <property type="entry name" value="Toxic_anion-R_TelA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38432">
        <property type="entry name" value="PTHR38432"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05816">
        <property type="entry name" value="TelA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9520" checksum="3A732DF93BC9DA48" modified="2018-04-25" version="1" fragment="single">LTNELLTKNAENLRQANKEIRTEMERGVFDIEAIEKANGDLIATIQESLQIADEGKARRAAAEASLLRMEGELKQTLAAASARPTGPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E7</accession>
    <name>A0A2M9P5E7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003622">
        <property type="protein sequence ID" value="PJN92743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6159" checksum="31976B23D7376F18" modified="2018-04-25" version="1" fragment="single">MTERVDETWGSDMTETITTIEGRAYVFIAVDHCSGEFVGAHAASGASRWEALEPIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I1</accession>
    <name>A0A2M9P5I1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003464">
        <property type="protein sequence ID" value="PJN92789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8927" checksum="ADEB25A91786856C" modified="2018-04-25" version="1" fragment="single">MGLGHIGLAPDGRGVFKPGVFEPGVFVDYEQQPDEPTARREMLDRLERLEQMIAPLVAQVGISATTDHLDRSKILRSPSVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I2</accession>
    <name>A0A2M9P5I2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rrf2 family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003394">
        <property type="protein sequence ID" value="PJN92814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5581" checksum="27C127E2FC9DDE2E" modified="2018-04-25" version="1" fragment="single">MRLDKHTDYALRVLMFLAANTDRLSTIAEIAGRFEISEAHLMKVVYRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J4</accession>
    <name>A0A2M9P5J4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tr-type G domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003392">
        <property type="protein sequence ID" value="PJN92816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006297">
        <property type="entry name" value="EF-4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43512">
        <property type="entry name" value="PTHR43512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="5"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6583" checksum="79005FCDE4EFA341" modified="2018-04-25" version="1" fragment="single">MTEISRIRNFSIVAHIDHGKSTLADRLIQSTGTVAARDMQAQLLDSMDIERERGITIKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J6</accession>
    <name>A0A2M9P5J6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TRASH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_26325</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003401">
        <property type="protein sequence ID" value="PJN92812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.620.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009078">
        <property type="entry name" value="Ferritin-like_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012348">
        <property type="entry name" value="RNR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011017">
        <property type="entry name" value="TRASH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007029">
        <property type="entry name" value="YHS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04945">
        <property type="entry name" value="YHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00746">
        <property type="entry name" value="TRASH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47240">
        <property type="entry name" value="SSF47240"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRASH" evidence="2">
        <location>
            <begin position="21"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8263" checksum="9DFC60B6A01D9157" modified="2018-04-25" version="1" fragment="single">MDHDHHHTSPHIPAGTETAKDPVCGMTVAVKPDGRHAEFDGATFHFCSEKCQTKFKADPWFYASGRAAGQRKAAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S9</accession>
    <name>A0A2M9P5S9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ribonuclease PH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04050</name>
        <name evidence="4" type="ORF">CNY89_25450</name>
        <name evidence="3" type="ORF">CNY89_25500</name>
        <name evidence="2" type="ORF">CNY89_27465</name>
    </gene>
    <organism evidence="4 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003745">
        <property type="protein sequence ID" value="PJN92692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003128">
        <property type="protein sequence ID" value="PJN92904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003119">
        <property type="protein sequence ID" value="PJN92911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000173">
        <property type="protein sequence ID" value="PJN96180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001247">
        <property type="entry name" value="ExoRNase_PH_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027408">
        <property type="entry name" value="PNPase/RNase_PH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01138">
        <property type="entry name" value="RNase_PH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNase_PH" evidence="1">
        <location>
            <begin position="11"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9010" checksum="D74BDC9FD40F3236" modified="2018-04-25" version="1" fragment="single">MRPSGRTPDALRTIEIETGVSRHAEGSCLIRMGGTHVLCTASLEESVPPFLRKTGLGWVTAEYGMLPRATTTRNRREAAAGKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P642</accession>
    <name>A0A2M9P642_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GreA_GreB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002938">
        <property type="protein sequence ID" value="PJN92980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GreA_GreB" evidence="2">
        <location>
            <begin position="31"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="108"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13455" checksum="1DA8C88500B60734" modified="2018-04-25" version="1" fragment="single">MLPEPKGELAPATDPAVQAEIDKRKAELNVSDADIRIRRVSVLTPVGTALIGRAEGAVIDCEFPAGTLRRLAILRISKNGPKPESAGIFRRESVRRMGDATSEANRPPHVASERRDLERMSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P655</accession>
    <name>A0A2M9P655_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_24145</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002740">
        <property type="protein sequence ID" value="PJN93054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="36"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="88"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN93054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="13966" checksum="D81E6185D5481294" modified="2018-04-25" version="1" fragment="single">SRHDAGHGDHCVSRNRGLLGRVGDRRYAAARVGNRLFLRAAVAMGPAGILAILAGWFTTEIGRQPWVVYNVMRTADAVSGHSALTMSVTLGAFVVMYFAVFGVGVSYMLKLVARGPDVEGDEPAAEDYTPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E1</accession>
    <name>A0A2M9P6E1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002619">
        <property type="protein sequence ID" value="PJN93102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="9525" checksum="C85B8B4F1851B26C" modified="2018-04-25" version="1" fragment="single">FKVFGLIESAEIVRETRDGRMLDVEITLSDWVFDAIENNHILTLNRQYFLLRKPLERRLYELARKHCGAQMEWRIAFEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E4</accession>
    <name>A0A2M9P6E4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23715</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002615">
        <property type="protein sequence ID" value="PJN93103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04277">
        <property type="entry name" value="ZnMc_serralysin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034033">
        <property type="entry name" value="Serralysin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Peptidase_M10" evidence="2">
        <location>
            <begin position="39"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14953" checksum="125C1A656B3A85DF" modified="2018-04-25" version="1" fragment="single">LSPDGDDEIRLANTTSASLGTARVADFPGNYLTSQTQDNGDVWFGTNYSYTNPIAGNYAWHTTLHEIGHALGLKHSQETGFFGAMPDNINSMEYSVMTYRSYINGPNGPYSNEANGFAQTYMMYDIAALQHMYGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K8</accession>
    <name>A0A2M9P6K8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002429">
        <property type="protein sequence ID" value="PJN93173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10968" checksum="5C1F9227E1CE929B" modified="2018-04-25" version="1" fragment="single">MSQDAQTSLAVLLLDIKDEIDAAKAERRHVLDALQRTRISELDRAFASLSKAEDFERDSRLHYRQRSRNSGDGAGGPCGLPARERPWARSWGPSCSSGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U1</accession>
    <name>A0A2M9P6U1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002179">
        <property type="protein sequence ID" value="PJN93284.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="8"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93284.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="18041" checksum="8D21BC8DFFAA8B3D" modified="2018-04-25" version="1" fragment="single">DGSCVRLRPERPNHVWSYDFVEDRTNDGRKLRMLNVIDEFTRECLAIRVDRKLKSTDVIDVLSDLFSPPGLFSVRNDPPDHSLVCDDPCKSLRGVPGHIRSDNGPEFIAKAVREWISAVGARTAFIEPGSPWENGYCESFNSKLRDELLNGELFYSLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V6</accession>
    <name>A0A2M9P6V6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002214">
        <property type="protein sequence ID" value="PJN93272.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93272.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="18220" checksum="6B0BC10FC55EF514" modified="2018-04-25" version="1" fragment="single">LRRLQGTQIETNLRQGGKEYFKVFGLIESAEIVRETRDGRMLDVEITLSDWVFDAIENNHILTLNRQYFLLRKPLERRLYESRESIVVRRWNGRIGVRNLAEKCGSASSEKEFRRMLGIIIDDDAQHNHMPDYKFIVDGENILVKRKDVVVEISGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P720</accession>
    <name>A0A2M9P720_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002057">
        <property type="protein sequence ID" value="PJN93351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="4"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18238" checksum="51C607DD83A933F6" modified="2018-04-25" version="1" fragment="single">FIFNELYRDGNTSDAVRHKNILVEDNYIRNANTHGVTVTHADGVTVRGNTVTLNGDQGLTQIPLVNVSALSRNVEIIGNTVSSVQDSLGDSWIVYGNDVSARSRFHWDGVFVNGVLQSPVRPTAQDPSLSDRYFIDRSAFNGTTPLVIDDLDFAKGDRIVLTGFKAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P747</accession>
    <name>A0A2M9P747_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">CopG family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002038">
        <property type="protein sequence ID" value="PJN93357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9200" checksum="95DC9D7D9D6AFC00" modified="2018-04-25" version="1">MPTSATMTIRIATDTKRKLERLAADTRRSKSFLAAEAVSAYVERELAIIDGVQRGLADVEAGRVVLHDAAMDEVQAVIDAAKSGKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A8</accession>
    <name>A0A2M9P7A8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001931">
        <property type="protein sequence ID" value="PJN93422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12773" checksum="44D881BBBD640D0E" modified="2018-04-25" version="1" fragment="single">ATRTRPSSWSPTRPSCRPRSENVRGGDTILLKAGTYADLNLTHSSNRNYKFTEEVTIKSADPTHQAVVNELFIRGATNVTISDLKFDYTGVQAPTRSPADRRSVLHRERGRHHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D7</accession>
    <name>A0A2M9P7D7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Mobilization protein C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001889">
        <property type="protein sequence ID" value="PJN93443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10847" checksum="20104078416DC125" modified="2018-04-25" version="1">MAYKRKSPDEKIAELEKKAAQIKARLQSEQAKIKGQERKNDTRRKIIVGALALEHEDAAFKETLARLIRQYVTKPQDRALFDLPPLPEPETPPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G8</accession>
    <name>A0A2M9P7G8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage major capsid protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001869">
        <property type="protein sequence ID" value="PJN93458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024455">
        <property type="entry name" value="Phage_capsid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05065">
        <property type="entry name" value="Phage_capsid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01554">
        <property type="entry name" value="major_cap_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16181" checksum="65F05D6579E6D342" modified="2018-04-25" version="1" fragment="single">MAQRTDLESQRSKPPARSPAPGSKSQPAEIAAFLAQASATAQVAGAGRLIFALDATMSRQPTWDLACQLQAEMFRAAGRVGGLSVQLVYYRGNGEAKASAWAADATALARSMAAISCHGGLTQIAAGEPARLMGYPVLIAEDMPDIAAGAFAIAFGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H0</accession>
    <name>A0A2M9P7H0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP-dependent DNA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001868">
        <property type="protein sequence ID" value="PJN93459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8754" checksum="801AC92331E911F5" modified="2018-04-25" version="1" fragment="single">MLDGEAVVLDDRGMPDMARLRSSLAGGRGERFVCFAFDILHLDGFDMRPAPLVERKRLLDALLAGSSEALRLSEHLGLEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U8</accession>
    <name>A0A2M9P7U8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed DNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_19675</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01001670">
        <property type="protein sequence ID" value="PJN93598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011708">
        <property type="entry name" value="DNA_pol3_alpha_NTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041931">
        <property type="entry name" value="DNA_pol3_alpha_thumb_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040982">
        <property type="entry name" value="DNA_pol3_finger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004805">
        <property type="entry name" value="PolC_alpha"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32294">
        <property type="entry name" value="PTHR32294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07733">
        <property type="entry name" value="DNA_pol3_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17657">
        <property type="entry name" value="DNA_pol3_finger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0235">DNA replication</keyword>
    <keyword evidence="5" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="3" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="DNA_pol3_alpha" evidence="7">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="DNA_pol3_finger" evidence="8">
        <location>
            <begin position="123"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF07733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF17657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="207" mass="22761" checksum="C72DA73603A7B431" modified="2018-04-25" version="1" fragment="single">AVRDVGRVLQMPYGQVDRLSKMIPLDGVKPVSINKALADEPRLVEESRREPQVKRLLDIAAQVEGLLRNASTHAAGVVIGDRPLVELVPLYRDPRSDMPATQYNMKWVEQAGLVKFDFLGLKTLTVIQNALDLLAERGIVVDIGAIPLDDPATYSLYASAQTAAVFQVESAGMRDALRQLKPTCVEDIIALVALYRPGPMENIPKFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F0</accession>
    <name>A0A2M9P8F0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001431">
        <property type="protein sequence ID" value="PJN93811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="260" mass="28469" checksum="7388F912F564542D" modified="2018-04-25" version="1" fragment="single">PATPRTGRLRFRWRTSQLHPWSDAGAPLAVPAPEGIVDRSLFAMTRAEADDVLPIALVTFKVASTFSGSGEGAPCNNIRAQHGPVLLALEAFSEQTRTFTSKNWTGAQAGSQRLLAQLRHWANDVQTAPAGRSGYAAQYEMQFVSTVAVARLIPSVWQVLTETERARLDLVMKGCLVSNCFILSDNSPYPGDWNSRRTLRGYSCGRNNAPNFSSPVRLTPYVIAEYMKRNGEDAQTFLNSFDQTAFAARAAALGGVDDLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F6</accession>
    <name>A0A2M9P8F6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA topoisomerase I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18250</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001428">
        <property type="protein sequence ID" value="PJN93814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003917">
        <property type="term" value="F:DNA topoisomerase type I (single strand cut, ATP-independent) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000380">
        <property type="entry name" value="Topo_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013498">
        <property type="entry name" value="Topo_IA_Znf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025589">
        <property type="entry name" value="Toprim_C_rpt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42785">
        <property type="entry name" value="PTHR42785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13368">
        <property type="entry name" value="Toprim_C_rpt"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01396">
        <property type="entry name" value="zf-C4_Topoisom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="zf-C4_Topoisom" evidence="2">
        <location>
            <begin position="70"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="226"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="246" mass="26709" checksum="1F5FA5D0ECBB1AEB" modified="2018-04-25" version="1" fragment="single">DFTADLETDLDRVTTGEEDWKVLLGRFWKDFSAALGETEGLRITEVLDKINEVLEPHLFPVTAEDPEPRRCKVCGTGRLSLRTARSGGAFIGCSNYPECRYTRPLAGDADGELAALDGKALGEDPAGVPVTLRKGPYGFYVQLGEAVEKEKPKRASIPKGMEPGGVDLGRALELLSLPRVIGPHPEDGEPIEAAIGRFGPYVKHGKTYANLKDAEEVLTIGMNRAVEAAPARTPRPDLRTDSSWNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K4</accession>
    <name>A0A2M9P8K4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptide chain release factor N(5)-glutamine methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001391">
        <property type="protein sequence ID" value="PJN93863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="6870" checksum="E6B771A7B2E7FE38" modified="2018-04-25" version="1" fragment="single">DGLEAYRAIAAGLDGLLAPLGRAFFEIGATQGEAVAEIFAAAGFSVAIHPDLGGSDRVAAVTRPDRAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L7</accession>
    <name>A0A2M9P8L7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001376">
        <property type="protein sequence ID" value="PJN93885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005094">
        <property type="entry name" value="Endonuclease_MobA/VirD2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03432">
        <property type="entry name" value="Relaxase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="114"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="31385" checksum="B0A27CB6F6AD03F1" modified="2018-04-25" version="1" fragment="single">PIWSAIWRSCEAIAPLFPHSLPTMIIPLETRKIPKAIGLDAYQALAVAHRDTDHAHVHVMVNLIHPETGLSAASKQDGRPAVLSYTQRKLSAWAAAFEREHGLIVTEGRLANANKRAEGQQVDARRKPRNVYERDKEETQDSRRAYKKRDFTEQARGLAAESRDMNDRHGTEWTALRSAYHARKDAAYAANGDEIRDTLAELKDGQKRAWSAIHMRQRSEVEDFRRGEKSALGRIWHGAAAFRELALEGNALGGFLAAFSQEERLAIVQRKHDRERAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L9</accession>
    <name>A0A2M9P8L9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001388">
        <property type="protein sequence ID" value="PJN93869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="9844" checksum="8A20B6AD7AFA10AE" modified="2018-04-25" version="1">MQGVDNLTDFIAASCALTLEGRVADIRCPVLLTTAEGDPMSKGAEALAAELPGPATLLRFTSAEGAGDHCSMRNRTLLNRRVLAWLDETLGASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P4</accession>
    <name>A0A2M9P8P4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001350">
        <property type="protein sequence ID" value="PJN93912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="126"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="19764" checksum="3C411C1784405BD1" modified="2018-04-25" version="1" fragment="single">MDRRDEDAIRSRVLSALGDNRVRGYSFLGHLLRLGWPRIGTDSLVVTMDAGPHGRDPDGRVSLIALCGMLDIGLATAPRLSIGPAARQATVQLHLQFTGAPAKGPLALEAAFEASAPALPCGRRFRAASSGDGPAASPVHRRAGEGPPGAGGRVRGLQRRPCPAADVFARRRQATVQLHLQFTGAPAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S4</accession>
    <name>A0A2M9P8S4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Restriction endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001340">
        <property type="protein sequence ID" value="PJN93919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009036">
        <property type="term" value="F:type II site-specific deoxyribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007636">
        <property type="entry name" value="Restrct_endonuc_II_XhoI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04555">
        <property type="entry name" value="XhoI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10281" checksum="756C0A7C2DA7A2AE" modified="2018-04-25" version="1" fragment="single">MALDLADYERKAREATMAFWGNRAKAIEAKQKAGTIDQGERGAVTAGTTMDGFAAMMIDLVRANGLEHAQIHRTKGVLMLPGYFRPTKLWDIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T1</accession>
    <name>A0A2M9P8T1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001310">
        <property type="protein sequence ID" value="PJN93955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019068">
        <property type="term" value="P:virion assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006429">
        <property type="entry name" value="Phage_lambda_portal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05136">
        <property type="entry name" value="Phage_portal_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="247"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31831" checksum="2B0A60B463A9BA66" modified="2018-04-25" version="1" fragment="single">IAHVYEKQRTQARGVPWGAPVIRSLRDLDDYEVAELVRKKTEACVTAIVFGDDEAQQGIAPSVVDADGNRVEQFEPGLIAYARGGKDIRFNQPSATGGYGEYKRASLHTISAGFRVPYELLTGDLSQVNYSSIRAGLVEFRRQIDAVQWQLFIPMFCAPVWRWFTEAAWAAGHIPSPIVPVEWSPPKFEAVDPQKDAMANLLSIRSGTMTLAEVIAKQGRNPDAVLAEIAATNAKLDALGLVLDSDPRRVTKTGSAQSKDGASDPAKDPAADEPDTDGPAADADNDPAQADQQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J0</accession>
    <name>A0A2M9P9J0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">LptD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001136">
        <property type="protein sequence ID" value="PJN94195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061024">
        <property type="term" value="P:membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010033">
        <property type="term" value="P:response to organic substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007543">
        <property type="entry name" value="LptD_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04453">
        <property type="entry name" value="LptD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LptD" evidence="1">
        <location>
            <begin position="229"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="364" mass="40065" checksum="469D594A7EB03AC9" modified="2018-04-25" version="1" fragment="single">MEALYQGRILRASRIVYDEKAGVIRAEGPILLVDPATGTMLADAAALTPDLTEGLIEGARLLIAGQLQIAAVEARRRQGRFVSMDRVIASSCSICESDPKPIWAIRARRVVQDEQEMRIYFDNARLEVLGLPVAWLPWMSIPDPRAKRSTGLLAPEFVNSQIYGFGVKTPYYRVLGPSADMTVTPFVTDQGGYLLEGEYRRKVERGGFTFGGVYAFDDGLDASLGGDHSRWFVNTTGDYALGHGFIADFDVSVVSDDVFLKQFDYSDADLLTSNAQITRTREKDNLRLEAIAFQSLLPEEDSSSVPAIVPDFAYTRVLSDPVAGGRVSWDVAALGVTRDTGDNMVRGTALGDWRRDMTLVHGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M5</accession>
    <name>A0A2M9P9M5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Methylmalonate-semialdehyde dehydrogenase (CoA acylating)</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_15805</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001118">
        <property type="protein sequence ID" value="PJN94221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004491">
        <property type="term" value="F:methylmalonate-semialdehyde dehydrogenase (acylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010061">
        <property type="entry name" value="MeMal-semiAld_DH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43866">
        <property type="entry name" value="PTHR43866"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="3">
        <location>
            <begin position="17"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="281"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="293" mass="30922" checksum="0A6E1857B474A25B" modified="2018-04-25" version="1" fragment="single">MPDLAHFIDGRRTAGSSGRFAEVFNPATGEVQARVPLATKAEMDAAIDSAAAAQPAWAATNPQRRSRVIMRFVELINRDMDKLAEALSREHGKTLADARGDVTRGLEVAEFCIGAPHLLKGEFTDSAGPGIDMYSMRQPLGVVAGITPFNFPAMIPLWKMCPALVAGNAFILKPSERDPSVPLMLAELMQEAGLPDGVLQVVNGDKEAVDAILDNETIQAIGFVGSTPIAEYIYGRGCSNGKRVQCFGGAKNHMIIMPDADLDQAADALVGAGFGAAGERCMAISVAVPVGEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P7</accession>
    <name>A0A2M9P9P7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase family 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001099">
        <property type="protein sequence ID" value="PJN94242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="30545" checksum="EB6DAEAA99280507" modified="2018-04-25" version="1" fragment="single">DRFAAFATAAARRFAEETDVVPFWCPINEISFFAWGGGDVAYLNPFARGRGFELKVQLSRAAIAAMRALRAVDPRARFVQCEPLIAIHHDPAADAPRREAEGWHDAQFQAADLTSGRIWPQIGGEPGFLDIVGVNYYSTNQWLHGGPQIDHDHPAHRPLSDLLVEVHARYGRPILVSETGIEGDARAAWLRRVADEVALARTRGVPVEGICLYPVANHLGWDDDRLCPNGLLGHEPRSNGRTVHLPLAEEVHATLLRFGTDAQAAGLPGKRPAAWGGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V9</accession>
    <name>A0A2M9P9V9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lytic transglycosylase domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001048">
        <property type="protein sequence ID" value="PJN94323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="2">
        <location>
            <begin position="27"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6701" checksum="5AF271A0FEB6452F" modified="2018-04-25" version="1" fragment="single">MAEGVAAVYAQDPAVADAGLSQAEFVRVFVALIDQESRFNPQALSPKGAQGLGQLMPQTAAQLGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X2</accession>
    <name>A0A2M9P9X2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Elongation factor 3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15115</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001040">
        <property type="protein sequence ID" value="PJN94337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="158"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="370"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="190"/>
            <end position="197"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="397"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="397" mass="43904" checksum="7FFAACECF9659AB2" modified="2018-04-25" version="1" fragment="single">RRAALARLLAEAPDLMLLDEPTNHLDVTAIAWLEEYLKETRAAVVVISHDRAFLRALTDRILWVDRGEVRRLDQGFGAFEEWRDKVFEDEDLARHKLDRLIKAEGRWAVEGISARRKRNQGRVRRLAEMRDERRGQIQRLGAAKMEFESATRSGKLVLEAEGVAKGFGGRTILRDFALKVQRGERIALVGPNGVGKTTLLKLLTGELAPDEGTVRLGVNLNRAVFDQNRAALDPTASLWNTLTGDADLGVSGRNDQVMVRGKPRHVVGYLKEFLFAEGQARSPVSALSGGEKARLLLARLMARDSNLLVLDEPTNDLDVETLDLLQELVDDYDGTVLLVSHDRDFVDRVATTTIAMEGDGTAQIYAGGWSDYQSQRPKDGVAAPAAARGRGPAPKAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y4</accession>
    <name>A0A2M9P9Y4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Carbon monoxide dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001036">
        <property type="protein sequence ID" value="PJN94345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd05018">
        <property type="entry name" value="CoxG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010419">
        <property type="entry name" value="CO_DH_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023393">
        <property type="entry name" value="START-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38588">
        <property type="entry name" value="PTHR38588"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06240">
        <property type="entry name" value="COXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="18344" checksum="0E97BDED92A60D70" modified="2018-04-25" version="1">MELTGTRQIAADRATVWAALNDAEVLKAAIPGCQELTGDPESGFEATVKQKVGPVSATFHGKVALSNVVEGVSYTIAGEGKGGAAGFAKGSADVRLEEAEGGTQLIYDVKANVGGKIAQLGSRLIDGFAKKMADQFFENFQRAIEGPEAAEAEVEAAAEEGEKKPGWFKRLVGKTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA15</accession>
    <name>A0A2M9PA15_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_14880</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001017">
        <property type="protein sequence ID" value="PJN94377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008780">
        <property type="term" value="F:acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03351">
        <property type="entry name" value="LbH_UDP-GlcNAc_AT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029098">
        <property type="entry name" value="Acetyltransf_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010137">
        <property type="entry name" value="Lipid_A_LpxA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43480">
        <property type="entry name" value="PTHR43480"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13720">
        <property type="entry name" value="Acetyltransf_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01852">
        <property type="entry name" value="lipid_A_lpxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 8" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="2" id="KW-0441">Lipid A biosynthesis</keyword>
    <keyword evidence="1" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="3 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Acetyltransf_11" evidence="7">
        <location>
            <begin position="178"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="206"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13720"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="21103" checksum="6B0F397F4DBB2D3D" modified="2018-04-25" version="1" fragment="single">MTDTIIHPTAVVEPGARIGAGCRIGPYCVIGPDVMLAEGVILHSHVAIAGVTSIGAGTEIWPFASVGSAPQDLKYAGERTELIIGAKNRIREYATLNTGTVQGGGVTRIGDGNLLMMSIHVGHDCVIGNGVILVNNATLGGHVTIEDNVIVGGLSAVHQFCRLGRGAMIGGLTGVVADVIPYGMVVGERGHLGGLNLVGLKRRGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA8</accession>
    <name>A0A2M9PAA8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase</fullName>
            <ecNumber evidence="6">5.3.1.17</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">5-keto-4-deoxyuronate isomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">DKI isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">kduI</name>
        <name evidence="7" type="ORF">CNY89_14380</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate</text>
            <dbReference type="Rhea" id="RHEA:23896"/>
            <dbReference type="ChEBI" id="CHEBI:17117"/>
            <dbReference type="ChEBI" id="CHEBI:29071"/>
            <dbReference type="EC" id="5.3.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 4/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the KduI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.17" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000963">
        <property type="protein sequence ID" value="PJN94459.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00545">
        <property type="reaction ID" value="UER00826"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008697">
        <property type="term" value="F:4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045490">
        <property type="term" value="P:pectin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00687">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007045">
        <property type="entry name" value="KduI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021120">
        <property type="entry name" value="KduI/IolB_isomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027449">
        <property type="entry name" value="KduI_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38461">
        <property type="entry name" value="PTHR38461"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04962">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006625">
        <property type="entry name" value="KduI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="192"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94459.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="30031" checksum="95548C52D059711B" modified="2018-04-25" version="1">MLTVETRHAVHQDHARTMDTAALRRNFLAADMFADGEIRLIYTHYDRFVMGGAVPAGGELTLDQVAETRTPSFLDRRELGVVNIGETGTVAAGGESFSLERGDVLYLGMGSGPVTFGGAGRFYLVSAPAHRALPARLVTLADSKEVKLGATETSNKRTINQFIHPLVMESCQLVLGYTRLEDGSVWNTIPSHVHDRRMEAYLYFGMAPEASVLHLMGEPQETRHLFIANEQGAISPPWSIHSGAGIGSYTFIWAMAGDNVDYTDMDFVQPADLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD8</accession>
    <name>A0A2M9PAD8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000950">
        <property type="protein sequence ID" value="PJN94481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15752" checksum="BD07D1E4719B685F" modified="2018-04-25" version="1">MHPADEIHEYAMLREKGVGEAAIAIAFGVTKAHVKRRLRLAGLPEPVQAALCADRIGLTEAAVFVLCDDPARIEEVLAQIGGHPGRYSEDSIKRLLKAGAVRDTDRRARFVLAVLSGVGRQASGRDFTHYNPPARTGTIEVLLSDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN3</accession>
    <name>A0A2M9PAN3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GLOBIN domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the globin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000885">
        <property type="protein sequence ID" value="PJN94595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005344">
        <property type="term" value="F:oxygen carrier activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000971">
        <property type="entry name" value="Globin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00042">
        <property type="entry name" value="Globin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0349">Heme</keyword>
    <keyword evidence="1" id="KW-0408">Iron</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0561">Oxygen transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="GLOBIN" evidence="2">
        <location>
            <begin position="8"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11977" checksum="45ADC5AB06FED478" modified="2018-04-25" version="1">MAITEDQLDLLRASMRLVNARRPLMSAIFYEKLFEIEPGFRQLFSGNLREQTDKVMFALGAVLGQIHDVEACRDMTRDLAIRHVGYGVKDGDYAKAGDAVLATLARC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT0</accession>
    <name>A0A2M9PAT0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000862">
        <property type="protein sequence ID" value="PJN94631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="240" mass="26811" checksum="7DEE74A679097E67" modified="2018-04-25" version="1">MARWLGRLWFAPSDLTRYARADRAMTGVYAPYWTYDAATETDYTGQRGIVRYETRHVPAMVNGRQTMQAQTVARVDWFPARGRVSRFFDDVLVLGSTSLPKRYTDAIAPFDLSALTPYDPRYLAGFRAEAYTVGVEDGYAEGKAIMNRVIEGDVRRDIGGDQQRITGLDTRVGKLTFKHVLLPVWLAAFRYHGQSYRFVVNGRTGAVEGERPYSTAKIALAAIAGLALAALVAWLMIQNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU7</accession>
    <name>A0A2M9PAU7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000846">
        <property type="protein sequence ID" value="PJN94655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="10517" checksum="5B415B785CFDFB03" modified="2018-04-25" version="1" fragment="single">MPWTEAARREYRRARPRYASDMTDREWALVAPSVPPPRRLGRPRTTDLREVMNAILYIATTGCQWVQLPKDLPPYSTVQRYFYDWRDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW4</accession>
    <name>A0A2M9PAW4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000838">
        <property type="protein sequence ID" value="PJN94671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="43" mass="4478" checksum="F0411EF037B830E4" modified="2018-04-25" version="1" fragment="single">MPTPTCRLFRPGETYAGKQGFDYAAGVSAESAGATGICMHLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB57</accession>
    <name>A0A2M9PB57_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Hydantoin racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000786">
        <property type="protein sequence ID" value="PJN94762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="5815" checksum="8E9E95F9FF64D2B9" modified="2018-04-25" version="1" fragment="single">MRILCLNPNRTAFVTATVAAEVRALLGPGVTVVEATADFGPDVIRTHLDAAVATHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA2</accession>
    <name>A0A2M9PBA2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000760">
        <property type="protein sequence ID" value="PJN94808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="23"/>
            <end position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11342" checksum="91AB2A49485F322F" modified="2018-04-25" version="1">MAFDRKSLAEITKTAAGPQSRKDRPQEPQQAVTVTRVGAVGQSDVRPSRNGKAFVGGYFPLEVRRQIKVLAAEQDKTVQQLAGEALNLLFATYGKGEIAPTERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP7</accession>
    <name>A0A2M9PBP7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acetyl-CoA--acetoacetyl-CoA transferase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000673">
        <property type="protein sequence ID" value="PJN94961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012792">
        <property type="entry name" value="3-oxoacid_CoA-transf_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004163">
        <property type="entry name" value="CoA_transf_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02429">
        <property type="entry name" value="pcaI_scoA_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01273">
        <property type="entry name" value="COA_TRANSF_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="22324" checksum="8C62CC5385E900DB" modified="2018-04-25" version="1">MKTAIKAAEAAELVTDGSTVLIGGFMGVGSPHRLIDALVTRGVKNLTLVCNDTAMPGVGVGKLVTAGALRRVIASHIGLNPETQKKMIAGELEVELVPQGTLVERIRAGGVGLGGVLTPTGIGTLVEDGKPVIEVDGRPYLLDKPIKGDFALIGCFSADYAGNLAYQLTAHNFNPIMAMAAATVIAEPEHILPVGAIPPDAVKTPGVLIDHLVARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP8</accession>
    <name>A0A2M9PBP8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Type II secretion system core protein G</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">gspG</name>
        <name evidence="13" type="ORF">CNY89_11345</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GSP G family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000676">
        <property type="protein sequence ID" value="PJN94954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015627">
        <property type="term" value="C:type II protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015628">
        <property type="term" value="P:protein secretion by the type II secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000983">
        <property type="entry name" value="Bac_GSPG_pilin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012902">
        <property type="entry name" value="N_methyl_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045584">
        <property type="entry name" value="Pilin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013545">
        <property type="entry name" value="T2SS_protein-GspG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010054">
        <property type="entry name" value="Type2_sec_GspG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07963">
        <property type="entry name" value="N_methyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08334">
        <property type="entry name" value="T2SSG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00813">
        <property type="entry name" value="BCTERIALGSPG"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54523">
        <property type="entry name" value="SSF54523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02532">
        <property type="entry name" value="IV_pilin_GFxxxE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01710">
        <property type="entry name" value="typeII_sec_gspG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00409">
        <property type="entry name" value="PROKAR_NTER_METHYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 11" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSG" evidence="12">
        <location>
            <begin position="43"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16393" checksum="3DC2C402BEB6F9C1" modified="2018-04-25" version="1">MSHTKSDHSPRPRKRDSQSGVTLIEMMVVLVIIAIVAALIVPNVIGRPDEARVTVARTDIRTIASSLEMYRLDNRRYPTTAQGLEALAARPVSPPAPPNWASGGYLAQVPVDPWGNPYVYRSPGDGAPYELISLGADGQPGGEGVDADLSHGAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ7</accession>
    <name>A0A2M9PBQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA--3-ketoacid-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000673">
        <property type="protein sequence ID" value="PJN94962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012791">
        <property type="entry name" value="3-oxoacid_CoA-transf_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02428">
        <property type="entry name" value="pcaJ_scoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="19344" checksum="9E8BB0D039EB8913" modified="2018-04-25" version="1" fragment="single">MDPKIVIARRVAALIQPGWLVNLGIGLPSMVANYVPAERQVYFQAENGVIGLGSRPPEGMEDPSLTDAGGGFVTAVPGAASIDSAMSFGLIRGGHLDMTVLGGLQVDEKGHLANWMVPGRMVPGMGGAMDLVAGARQVVVAMVHAAKGEPKIVPECTLPLTAARRVTLIVTEMALIEPTDAGLVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS3</accession>
    <name>A0A2M9PBS3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome segregation protein SMC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000664">
        <property type="protein sequence ID" value="PJN94981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003395">
        <property type="entry name" value="RecF/RecN/SMC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02463">
        <property type="entry name" value="SMC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SMC_N" evidence="1">
        <location>
            <begin position="106"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="22381" checksum="E9B39148E973284D" modified="2018-04-25" version="1" fragment="single">AMGAVNLRAEEDTAEVRAEFESLAGERADLEAAISKLRQGVANLNREGRGRLLEAFAQVNANFSALFARLFGGGEANLVLVESDDPLEAGLEIMCQPPGKKLSTLSLLSGGEQTLTALSLIFAVFLANPSPICVLDEVDAPLDDANVGRFCDLMDEMTERTATRFLVITHHAVTMSRMDRLFGVTMAEPGVSQLVSVDLAGAERLAEAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC00</accession>
    <name>A0A2M9PC00_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Coenzyme PQQ synthesis protein A</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Pyrroloquinoline quinone biosynthesis protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">pqqA</name>
        <name evidence="6" type="ORF">CNY89_10650</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis. PQQ is probably formed by cross-linking a specific glutamate to a specific tyrosine residue and excising these residues from the peptide.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Cofactor biosynthesis; pyrroloquinoline quinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the PqqA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000619">
        <property type="protein sequence ID" value="PJN95075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00539"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018189">
        <property type="term" value="P:pyrroloquinoline quinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00656">
        <property type="entry name" value="PQQ_syn_PqqA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011725">
        <property type="entry name" value="PQQ_synth_PqqA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08042">
        <property type="entry name" value="PqqA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02107">
        <property type="entry name" value="PQQ_syn_pqqA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0884">PQQ biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="cross-link" description="Pyrroloquinoline quinone (Glu-Tyr)" evidence="5">
        <location>
            <begin position="16"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="30" mass="3429" checksum="4764C3C9093E442B" modified="2018-04-25" version="1">MAWKKPVLREIACGMEINMYGPAEDEGELF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC03</accession>
    <name>A0A2M9PC03_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Amidophosphoribosyltransferase</fullName>
            <shortName evidence="5">ATase</shortName>
            <ecNumber evidence="5">2.4.2.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Glutamine phosphoribosylpyrophosphate amidotransferase</fullName>
            <shortName evidence="5">GPATase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">purF</name>
        <name evidence="11" type="ORF">CNY89_10715</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = 5-phospho-alpha-D-ribose 1-diphosphate + H2O + L-glutamine</text>
            <dbReference type="Rhea" id="RHEA:14905"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58681"/>
            <dbReference type="EC" id="2.4.2.14"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="5 8">Binds 1 Mg(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5 9">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5 6">Purine metabolism; IMP biosynthesis via de novo pathway; N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 5 6">In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.14" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000624">
        <property type="protein sequence ID" value="PJN95063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00124"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004044">
        <property type="term" value="F:amidophosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009113">
        <property type="term" value="P:purine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00715">
        <property type="entry name" value="GPATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01931">
        <property type="entry name" value="PurF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005854">
        <property type="entry name" value="PurF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035584">
        <property type="entry name" value="PurF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13537">
        <property type="entry name" value="GATase_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000485">
        <property type="entry name" value="Amd_phspho_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01134">
        <property type="entry name" value="purF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="5 6 11" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="5 9" id="KW-0408">Iron</keyword>
    <keyword evidence="5 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5 6" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="10">
        <location>
            <begin position="25"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="5 7">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="264"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="311"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="373"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 8">
        <location>
            <position position="374"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="410"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="466"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="469"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010138"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR000485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000485-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="491" mass="53985" checksum="4FD47C52D202D7EA" modified="2018-04-25" version="1">MTGVPRRLDPLLSHPFDDDKLREECGIFGVTGLKDAANFVALGLHALQHRGQEAGGIVSWHPENGFSSARRFGYVRDNFTSQSLMETLPGPLAIGHVRYSTAGSKGATQLRDVQPLFAEFAMGGCSIAHNGNLTNALALREELIRAGSIFQSGSDTECIIHLMARSIQKTIPERLKDALRRVEGAFSIVAMTRTKLIGVRDALGVRPLMLGKLGEGWVLSSETCALDIIGAEFVREIEPGEMVIIENGRIESFYPFRKVKPRFCVFEHVYFSRPDSVIGGRSVYETRRNIGVELAREAPVEADLVCPVPDSGTPAAIGFSQESGIPYAMGIIRNQYMGRTFIEPTEQIRNMGVRLKLNVNRAVIAGKRVVLVDDSVVRGTTSLKIRDMVMDAGAAEVHFRIASPPTMWPCFYGVDTPDRGKLLAANMSAEEMRTYLRVDSLRFVSLDGLYRACGVPFRDAADPQFCDACFSGDYPVRPSDMIERGFEPATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC15</accession>
    <name>A0A2M9PC15_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_10850</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Could be part of an ABC transporter complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the MlaE permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000635">
        <property type="protein sequence ID" value="PJN95042.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003453">
        <property type="entry name" value="ABC_MlaE_Proteobac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030802">
        <property type="entry name" value="Permease_MalE"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30188">
        <property type="entry name" value="PTHR30188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02405">
        <property type="entry name" value="MlaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00056">
        <property type="entry name" value="TIGR00056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="153"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="207"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="238"/>
            <end position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95042.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="27024" checksum="7D76814E46F5DEE3" modified="2018-04-25" version="1">MTVLSLLHGLLASLGASVLGLLAAIGRVTLFAGETLTHLARPPFYPAELGRQLLRIGWFSLPVVGLTMLFTGGALALQIYAGGARFNAETVVPSIVAIGILRELGPVLGGLMVAGRVASSIAAELATMRVTEQIDALTTLSTNAMKYLVLPRVLAATLALPLLVGVGDVIGILGGQLVGVSRLGFNPANYVRNTVDFITTGDVVSGLVKAAVFGFILALMGCYHGYNSGRGAQGVGRATTDAVVSASVLILAANYILTEAFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC46</accession>
    <name>A0A2M9PC46_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein translocase subunit SecE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">secE</name>
        <name evidence="8" type="ORF">CNY89_10340</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the SecE/SEC61-gamma family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000593">
        <property type="protein sequence ID" value="PJN95125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.1030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00422">
        <property type="entry name" value="SecE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005807">
        <property type="entry name" value="SecE_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038379">
        <property type="entry name" value="SecE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001901">
        <property type="entry name" value="Translocase_SecE/Sec61-g"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33910">
        <property type="entry name" value="PTHR33910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00584">
        <property type="entry name" value="SecE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00964">
        <property type="entry name" value="secE_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7" id="KW-0653">Protein transport</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0811">Translocation</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="28"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00422"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7482" checksum="747C2F40518D8BE9" modified="2018-04-25" version="1">MARTNPLQFVQQVRAETAKVVWPTRREVMLTTVMVMIMATVFATFFFSVDLVIRFALEAILRMAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD3</accession>
    <name>A0A2M9PCD3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Methionyl-tRNA formyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000557">
        <property type="protein sequence ID" value="PJN95205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016742">
        <property type="term" value="F:hydroxymethyl-, formyl- and related transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3797" checksum="442279154C85C2E3" modified="2018-04-25" version="1" fragment="single">MRLIFMGTPDFAVPALLALHAAGHDIACVYTRAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD8</accession>
    <name>A0A2M9PCD8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">RNA polymerase-binding transcription factor DksA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 8" type="primary">dksA</name>
        <name evidence="8" type="ORF">CNY89_09985</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Interacts directly with the RNA polymerase.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the DksA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000566">
        <property type="protein sequence ID" value="PJN95184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00926">
        <property type="entry name" value="DksA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012784">
        <property type="entry name" value="DksA_RNA_pol-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037187">
        <property type="entry name" value="DnaK_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000962">
        <property type="entry name" value="Znf_DskA_TraR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020458">
        <property type="entry name" value="Znf_DskA_TraR_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01258">
        <property type="entry name" value="zf-dskA_traR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109635">
        <property type="entry name" value="SSF109635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02420">
        <property type="entry name" value="dksA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01102">
        <property type="entry name" value="ZF_DKSA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51128">
        <property type="entry name" value="ZF_DKSA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 5" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="DksA C4-type" evidence="7">
        <location>
            <begin position="59"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="dksA C4-type" evidence="6">
        <location>
            <begin position="102"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="16379" checksum="B071A406C8E7F0BD" modified="2018-04-25" version="1">MKPETKFDVEYQPSDDEPFMNPRQLDYFKRKLLAWKGSILAESKGTIETMQADTRNIPDIADRASEETDRALELRTRDRQRKVVSKIDAALRRIEDGSYGYCEETGEPISLRRLDARPIATLSLEAQERHERKERVHRDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ5</accession>
    <name>A0A2M9PCJ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Host specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000525">
        <property type="protein sequence ID" value="PJN95260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025195">
        <property type="entry name" value="GTA_TIM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13547">
        <property type="entry name" value="GTA_TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GTA_TIM" evidence="1">
        <location>
            <begin position="447"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="514"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="514" mass="53488" checksum="37E232E5EA7E0A3C" modified="2018-04-25" version="1" fragment="single">MATLVLGAAGAAIGGSIGGAILGVSAATIGGFIGSTIGSVVDSWIISSLAPTQRIEGARLDTLRITSATEGAVIPRLYGRMRMGGNIIWATDFREETKTTTQGGGKGGGGGKVKTTEYLYYASFAVALCEGPITGIGRIWADGKPMDLSGVTWRWYPGDEAQTADPFIAAKMGAANTPAYRGTAYVVFEELALSTYGNRLPQLSFEVFRPLADPDTAEGLTRAVTMIPASGEFTYATQAIRKTDGGATVPENLNALADSTDMVEALDRLQAMAPAVESVSLVVAWFGDDLRAGSCKVRPGVEVLAKSTTPASWSANGVSRANAFLVSRDDQDRPVYGGTPSDFAVVQAIEEMKARGLRVTFYPFILMDVPPGNTLPNPYSDNAAETGQPVFPWRGRITCSPAAGFAGAVDKTATAASQVAALFGAATPASFSVSGQSVSWTGPSGDWGLRRMVLHYAHLCAAAGGVDAFLIGTEMPGLTTIRSGASSYPAVQAFRDLLGDVRSILGSGTKIGYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU1</accession>
    <name>A0A2M9PCU1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sulfotransferase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000482">
        <property type="protein sequence ID" value="PJN95367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="21259" checksum="A6C891765A188352" modified="2018-04-25" version="1" fragment="single">MWSGPRNLSTALMRSFEARPDVAEVWDEPFYAAYLAASGEDHPMRAEVLSAQAQDWRVIASACAEAEGPPGTTIYQKQMTHHMLPGFGRDWMDAVTNVFLIRAPERVAASYRAKREAVSLEDIGFVQQAELFDRVADRLGKAPPVIDAEDVRADPQGVLTRLCDAIGLGFEPAMLTWEAGPRDSDGGLGLALVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW7</accession>
    <name>A0A2M9PCW7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">30S ribosomal protein S14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpsN</name>
        <name evidence="7" type="ORF">CNY89_08805</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts proteins S3 and S10.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the universal ribosomal protein uS14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000475">
        <property type="protein sequence ID" value="PJN95381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00537">
        <property type="entry name" value="Ribosomal_S14_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001209">
        <property type="entry name" value="Ribosomal_S14"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023036">
        <property type="entry name" value="Ribosomal_S14_bac/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018271">
        <property type="entry name" value="Ribosomal_S14_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR19836">
        <property type="entry name" value="PTHR19836"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00253">
        <property type="entry name" value="Ribosomal_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00527">
        <property type="entry name" value="RIBOSOMAL_S14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003686"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11503" checksum="28EDB6E0E47C1E9D" modified="2018-04-25" version="1">MAKVSMINRQKKREKLVAKYAAKREALKAVTKDDALSREERFKASLALAKLPRNSSATRLHNRCEVTGRPRAYYRKLRMSRIALRDLASAGQIPGMVKSSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD38</accession>
    <name>A0A2M9PD38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000442">
        <property type="protein sequence ID" value="PJN95461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="44"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="423" mass="47696" checksum="53C772B81EACD5AD" modified="2018-04-25" version="1" fragment="single">AKQRHTAKRVFERLRDEHAFTGGYTIVKDYIREHRRRGREMFVPLHHPPGHAQADFGEAAVVIGGVEQTAHFFAFDLPHSDASFVRAYPAATAEAWVDGHVHAFAFFGRVPQSVLYDNDRCLVARILPDGTRKRATLFSGFLSHYLIRDRYGRPGKGNDKGAVEGLVGWARRTFMVPLPRFACWEDFNAWLEAQCRKRQAEILRGHTETIGQRLARDLEAMAELPAAPFDACDQATGRVSSQALVRYKTNDYSVPVAYGYRDVWVRGYVDEVVIGCGGDVIARHPRCYDREDMVFDPVHYLPLIEKKISALDQAAPLAEWDLPAEFATLRRLMEARMIKAGRREYVQVLRLLETFDLADLHAAVKSALRLGAVGFDAVKHLVLCRVEKRPPKLDLDVYPYLPRANVARTSAASYMCLVSGNAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD88</accession>
    <name>A0A2M9PD88_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TNase-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000431">
        <property type="protein sequence ID" value="PJN95488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035437">
        <property type="entry name" value="SNase_OB-fold_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016071">
        <property type="entry name" value="Staphylococal_nuclease_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00565">
        <property type="entry name" value="SNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50199">
        <property type="entry name" value="SSF50199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TNase-like" evidence="1">
        <location>
            <begin position="2"/>
            <end position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5993" checksum="42C4D9405746B82D" modified="2018-04-25" version="1">MNLNERMVAAGQAVAYRKYSKRYIAAEGKAEAAGLGIWSTRFEMPWDYRRAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD89</accession>
    <name>A0A2M9PD89_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF4159 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000433">
        <property type="protein sequence ID" value="PJN95482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025297">
        <property type="entry name" value="DUF4159"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13709">
        <property type="entry name" value="DUF4159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4159" evidence="1">
        <location>
            <begin position="19"/>
            <end position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13709"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="209" mass="22908" checksum="27206A28AD9C7246" modified="2018-04-25" version="1">MSRRGRERPAGRPGPGPAAFPFLYWPVVEGQRMPSDAAYARLNDFMRHGGMILFDTQDAQLGGDAGASTPNGRVLQRIALRLDVSPLEMAPADHVLTRTFYLLQDFPGRWTGAPVWVEAAAQVEEVEGMPFRNLNDGVTPVVIGGNDWAGAWAITETGEPAYPVGRGLSGERQREMALRFGVNLIMYVMTGNYKSDQVHVPALLDRLGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD96</accession>
    <name>A0A2M9PD96_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome c family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_08080</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000422">
        <property type="protein sequence ID" value="PJN95510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11961">
        <property type="entry name" value="PTHR11961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="67"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="16820" checksum="27981A4B4A90FA70" modified="2018-04-25" version="1">MNTMEITKFVGAFCGALLVFLLIGTVSAAIFDTHSDQVAFSIEAPAGEGEAAAPEEAVDAVALVAAADAAKGATVFKKCAACHKIDGSNAVGPHLDGVVGRATGTVPDFKYSSAMASHGGNWDENALYAFLQSPKTAVPGTAMAFAGLPKSEDRANVIAYLKGLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF1</accession>
    <name>A0A2M9PDF1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000398">
        <property type="protein sequence ID" value="PJN95559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6377" checksum="339DAB8326115BC2" modified="2018-04-25" version="1" fragment="single">LAGAAIAPPVFSWPSAGGNPPQRALWGLGWTYGYQKQGPLGYPALQVDLTERLVDLRVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG2</accession>
    <name>A0A2M9PDG2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Muconate cycloisomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_07700</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Aromatic compound metabolism.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the mandelate racemase/muconate lactonizing enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000395">
        <property type="protein sequence ID" value="PJN95569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00356"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018850">
        <property type="term" value="F:chloromuconate cycloisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030145">
        <property type="term" value="F:manganese ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018849">
        <property type="term" value="F:muconate cycloisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019439">
        <property type="term" value="P:aromatic compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009063">
        <property type="term" value="P:cellular amino acid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03318">
        <property type="entry name" value="MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013370">
        <property type="entry name" value="Chloromuconate_cycloisomerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029065">
        <property type="entry name" value="Enolase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018110">
        <property type="entry name" value="Mandel_Rmase/mucon_lact_enz_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013342">
        <property type="entry name" value="Mandelate_racemase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013341">
        <property type="entry name" value="Mandelate_racemase_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13378">
        <property type="entry name" value="MR_MLE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02746">
        <property type="entry name" value="MR_MLE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01258">
        <property type="entry name" value="(chloro)muconate_cycloisomeras"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00922">
        <property type="entry name" value="MR_MLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02534">
        <property type="entry name" value="mucon_cyclo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00908">
        <property type="entry name" value="MR_MLE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00909">
        <property type="entry name" value="MR_MLE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0058">Aromatic hydrocarbons catabolism</keyword>
    <keyword evidence="7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-0464">Manganese</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MR_MLE" evidence="6">
        <location>
            <begin position="160"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="SMART" id="SM00922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="396" mass="41988" checksum="8788953D28BBEC98" modified="2018-04-25" version="1">MNKPYPPLATASTVAPTVSQIETMIIDLPTIRPHKLSVATMNGQVLMLVRVHCSDGIVGIGEGTTIGGLAYGGESPESMKINIDTWFAPVMIGQDATRVQALMARIGRMVRENRFAKSAVETALLDAQGKRLGLPVSELLGGRRRDRLPVAWTLASGDTSRDIAEAERMLDLRRHRVFKLKIGARAIKDDIAHVAAIKAALGDRGAVRVDLNMAWSEGEAAYGMAALAEAGCELVEQPVASTAALIRLARRFPVALMADESLTGPESAFEIARVQGADVFAVKLEQSGGAFNALRVAAIADAAGIGLYGGTMLEGAVGTVISAHAFSTFANLQWGTELFGPLLLTEEILAEPLEYSDFELTVPGGPGLGVTLDEDRVAFFARDGIRKTISIPGGKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ0</accession>
    <name>A0A2M9PDJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TIGR02300 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000376">
        <property type="protein sequence ID" value="PJN95615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012644">
        <property type="entry name" value="CHP02300_FYDLN_acid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09538">
        <property type="entry name" value="FYDLN_acid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02300">
        <property type="entry name" value="FYDLN_acid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Acidic residues" evidence="1">
        <location>
            <begin position="63"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11892" checksum="458D9397B58AFE89" modified="2018-04-25" version="1">MPKDEWGAKRVCPQCATRFYDLRHDPMACPACGAIFTLDSLTAVKPKALRPEKVKPEPVDLEDLPDIDNEDVIADDDDDMASDILEDEEDNVDLDEIADVAADEEES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ6</accession>
    <name>A0A2M9PDJ6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RIBORED_LARGE domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000370">
        <property type="protein sequence ID" value="PJN95627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RIBORED_LARGE" evidence="1">
        <location>
            <begin position="12"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="557" mass="60466" checksum="85979DA64B084004" modified="2018-04-25" version="1">MMDTYCSPSCSRVLRDAAYRASVALAREKGAFPKFDKALLESGMAKRLPEEIRAEIAAHGLRNSHLLSIAPTGTISLAFADNASNGVEPAFSWTYVRRKREPDGSMREYKVEDHAWRMWRARGGDVAALPPAFVNALEISARDHMAMQAAIQPFIDAAISKTVNVAEDYPFEEFEGLYLEAWKAGLKGITTYRPNSVLGAVLSVEPAAAAPQDLDQSEPDRRIRISDAPQVALAALRWPHRPKLTAGSPSWTYMIEAPGNRFAVFVGHVENGTNKPFEVWVNGEKTPRGLGALAKNLSMDLRANDQAWLKLKLDSLVKTPGAPFTVAMPPDGRAVPVAGNVSAFAEVVRWRCDQLGVFDAAEGPTPLVDAMFSRKEPKSGTDGTLSWTVDILNPSTGDDFAMFVKECVLPDGTKRPYSVWLSGAYPLELNGLTKSLSLDMRVIDPAWIGKKLRGLKDLPEAKGDFFARLPGAEKQAVQPSTIAYVARLLIHRYAMLGVLDADGYPARGAPVLWSDAPARGAAVAESGRACPECAHLTLVRRDGCDFCTSCGYTGACG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK3</accession>
    <name>A0A2M9PDK3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Zinc-binding dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07415</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000375">
        <property type="protein sequence ID" value="PJN95619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_N" evidence="2">
        <location>
            <begin position="25"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="171" mass="18188" checksum="3F3C42B689A02395" modified="2018-04-25" version="1" fragment="single">MKALRFHAAKDLRVEEIAKPGEPGPGQVLVRNRFVGICGTDLHEYSYGPIFIPKEPHPFTGAYGTQVLGHEFGGVVEAVGAGVTSVKPGDRVSIQPLLMPRSGDYFADRGLFHLSPELALVGLSWHSGGMADYALVNEYNVAPVPDTLSDEEAALVEPAAVAVYACDRGGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ1</accession>
    <name>A0A2M9PDQ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000363">
        <property type="protein sequence ID" value="PJN95644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008146">
        <property type="term" value="F:sulfotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005331">
        <property type="entry name" value="Sulfotransferase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03567">
        <property type="entry name" value="Sulfotransfer_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="368" mass="41850" checksum="395587C3C50A702C" modified="2018-04-25" version="1">MALLHLLTVPACLADAVRRLNPHAQYYCVYFGLIATVKLARSPYLRTEPSARPQARHNGALRGLTRFPEERSYCTCRHSRNPCDGGCVMRPDADPVPLVDPARKFVLFTNGKCGGTTIKTWFFCNLDLEGLERQPLKFTRAFGARFALRHALRGRRNAPRGAALHDVETVRRFTNHYRTSYCIPALATEKSRAFFNFAVVRHPEDRAVSGYVDKICGADRDTPWVRAVVARGGRDGAISFNGFLDYLESVEEEDCDPHWRRQSYIFGERRMDAFVRLEALSEDFARIAPRVGGAHLAVFDAKRQSNRYDRDAWAAAMDFDMPDRSSQEVIAWVARHGAFPPKEAFLTEAVRARIRRIYARDFEALPYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR0</accession>
    <name>A0A2M9PDR0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Chitooligosaccharide deacetylase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Nodulation protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_07205</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Is involved in generating a small heat-stable compound (Nod), an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in various plant protoplasts.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the polysaccharide deacetylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000359">
        <property type="protein sequence ID" value="PJN95654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0536">Nodulation</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NodB homology" evidence="6">
        <location>
            <begin position="17"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18491" checksum="FD653BE1DB8B8B4F" modified="2018-04-25" version="1" fragment="single">MRDLWLSIDFEDIAHDFKREHGIDPDGPVREAALWSSYEAIEAFLQRDLGGVRLTFFITGVVAAKCPGVVARIAADGHEVGCHYHFHDPCRLDAPEVFEANLCRAIEALETASGRKVLGFRAPRFSLRVEDEGHFRALDRHLAYDSSLTAGTAAELDGDAARLGLER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE09</accession>
    <name>A0A2M9PE09_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Type IV secretion system protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06470</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000306">
        <property type="protein sequence ID" value="PJN95787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007430">
        <property type="entry name" value="VirB8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04335">
        <property type="entry name" value="VirB8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="25"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="VirB8" evidence="6">
        <location>
            <begin position="8"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="24937" checksum="A2CBBCA1AC2560B9" modified="2018-04-25" version="1">MSQRSDVAQRFEDEVFFGLQRRAALFGWLAGLSLATALCAVGAMVFMLPLKEIRPYVVMVDRQTGESELVVSTRPADLAETDAVRQAELVRYVSERETYDTADNRERIPAVLATSQGQAATSLRALWTKEADQYPPAIYGEDSLIKVKVRSVAILNDATAQVRFTRTLEQPGMQPVVRAFVATVGFVFQPRVERTLEAVWQNPLGFTVTSYRIDAETLDASTGKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE59</accession>
    <name>A0A2M9PE59_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transketolase</fullName>
            <ecNumber evidence="2">2.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000288">
        <property type="protein sequence ID" value="PJN95837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02012">
        <property type="entry name" value="TPP_TK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033247">
        <property type="entry name" value="Transketolase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522">
        <property type="entry name" value="PTHR43522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00456">
        <property type="entry name" value="Transketolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="1">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="25321" checksum="768696B38E3413B2" modified="2018-04-25" version="1" fragment="single">MNKQTPLAGERLMANAVRALAMDAVEAAKSGHPGMPMGMADVAAVLFNRFVTLDPADPEWPDRDRFVLSAGHGSMLIYALNHLLGYADMPMEELRAFRQLGARTAGHPEYGHVRGVEVTTGPLGQGIATAVGMALAERLQAARFPDLTDHYTYVIAGDGCLMEGISQEAIDLAGHLRLARLIVLWDDNRITIDGDADLSTSIDQGMRFRASGWKTLAADGHDPEAVAAAIEAARES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE65</accession>
    <name>A0A2M9PE65_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000296">
        <property type="protein sequence ID" value="PJN95813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019791">
        <property type="entry name" value="Haem_peroxidase_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037120">
        <property type="entry name" value="Haem_peroxidase_sf_animal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03098">
        <property type="entry name" value="An_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00457">
        <property type="entry name" value="ANPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="SSF48113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50292">
        <property type="entry name" value="PEROXIDASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="18"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="458"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="458" mass="50798" checksum="39DF95C97230FCA1" modified="2018-04-25" version="1" fragment="single">MFRNPDLIGSRESWLGALEARNPDGSGNNRGHSDWGVTRSTYQRVTENSYPDRFGTSWDVPVQERLGRNGPALVGDDVQPREITSRIMAQPTTSGGADVDLPSRAGINEYFQYFGQFLAHDVAQAGSDGTEAPLFLDGLPFPFSRTPFEIGSDDENGRVRQQINNKTSFLDLSQVYGISQAAENLLRARDTGAPNGRSAELLTGDGGMLPTFQEVADDKGVVVSSVIATLNRGASADLYATGDNRANQQTPLLSHHVTWARNHNWHVEQLREQFPSWNEERLFEAARALNEADWQNVVYNEYVAKLVGPRALSAYSGYDSRVDPSIINEWTTVAFRFGHDQSSNDLGLIAENGRVVDRMTLAEAFDFKAEGLRDDEGLGDWVRGQLARFSQEIDGKIVQGNRNLLFGNAVTTDLTVLDIQRGRDHGVGHFNKLRDGLGLDRYHSFDDFGRQNGIDDRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE70</accession>
    <name>A0A2M9PE70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Two-component sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000297">
        <property type="protein sequence ID" value="PJN95812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6268" checksum="856B2ECB80B0DBA1" modified="2018-04-25" version="1" fragment="single">MRLPGSLQVRLALSLGILLTLLWISAASVTAIIVRYEMDEVFDSALQETAQRLLPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE92</accession>
    <name>A0A2M9PE92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Acyl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_06210</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 7 8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the acyl-CoA dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000291">
        <property type="protein sequence ID" value="PJN95828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003995">
        <property type="term" value="F:acyl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901565">
        <property type="term" value="P:organonitrogen compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd01156">
        <property type="entry name" value="IVD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.540.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006089">
        <property type="entry name" value="Acyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006091">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046373">
        <property type="entry name" value="Acyl-CoA_Oxase/DH_mid-dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036250">
        <property type="entry name" value="AcylCo_DH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009075">
        <property type="entry name" value="AcylCo_DH/oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013786">
        <property type="entry name" value="AcylCoA_DH/ox_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037069">
        <property type="entry name" value="AcylCoA_DH/ox_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009100">
        <property type="entry name" value="AcylCoA_DH/oxidase_NM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034183">
        <property type="entry name" value="IVD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00441">
        <property type="entry name" value="Acyl-CoA_dh_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02770">
        <property type="entry name" value="Acyl-CoA_dh_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02771">
        <property type="entry name" value="Acyl-CoA_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47203">
        <property type="entry name" value="SSF47203"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56645">
        <property type="entry name" value="SSF56645"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00072">
        <property type="entry name" value="ACYL_COA_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00073">
        <property type="entry name" value="ACYL_COA_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0274">FAD</keyword>
    <keyword evidence="3 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Acyl-CoA_dh_N" evidence="11">
        <location>
            <begin position="12"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_M" evidence="10">
        <location>
            <begin position="127"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl-CoA_dh_1" evidence="9">
        <location>
            <begin position="234"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="245"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="368"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="247"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="128"/>
            <end position="137"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="161"/>
            <end position="163"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="284"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="341"/>
            <end position="345"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="370"/>
            <end position="372"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR634183-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR634183-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR634183-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU362125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="387" mass="41809" checksum="B31435D111240582" modified="2018-04-25" version="1">MFTASLDFALGEDLDALRDLVRSWAQERVAPLAAGIDRDNVFPAPLWREMGDLGLLGITVPEEYGGAGMGYLAHVIAVEEIARASASVSLSYGAHSNLCVNQIKLNGTAEQKARYLPKLVSGEHVGALAMSEAGSGSDVVSMRLRAEKRNDRYVLNGTKYWITNGPDADTLVVYASTDPEAGAKGITAFLIEKAMTGFSTSPHFDKLGMRGSNTAELIFQDVEVPFENVLGQEDKGVNVLMSGLDYERVVLSGIGTGLMHAILDHVTPYMHERRQFGRPIGEFQLMQGKLADFYTALNTARAYVYAVAAACDRGRVTRQDAAACVLYASEKAMEMAVQGVQAMGGAGYLNDSPLARILRDAKLMEIGAGTSEIRRMLIGRELMKVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH9</accession>
    <name>A0A2M9PEH9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nucleotide sugar dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05640</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000257">
        <property type="protein sequence ID" value="PJN95922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016628">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017476">
        <property type="entry name" value="UDP-Glc/GDP-Man"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014027">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036220">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014026">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001732">
        <property type="entry name" value="UDP-Glc/GDP-Man_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028359">
        <property type="entry name" value="UDP_ManNAc/GlcNAc_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00984">
        <property type="entry name" value="UDPG_MGDP_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03720">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03721">
        <property type="entry name" value="UDPG_MGDP_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500136">
        <property type="entry name" value="UDP_ManNAc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000124">
        <property type="entry name" value="UDPglc_GDPman_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00984">
        <property type="entry name" value="UDPG_MGDP_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52413">
        <property type="entry name" value="SSF52413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03026">
        <property type="entry name" value="NDP-sugDHase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDPG_MGDP_dh_C" evidence="4">
        <location>
            <begin position="329"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR000124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="450" mass="47183" checksum="4E36AEA16BBDA65E" modified="2018-04-25" version="1">MTAAAPESAVPDVAVVGFGYIGSVIAAVLAARGLSVVGIDTNAEMIAALNQGKCPIPEPGLEDLVAAGVKAGKLSGSTDPAAAKGVKAILITVGTPLSDEFEADLSHIRAACGAVAPYVSDGQLIMIKSTVPPGTTRLMHDEIFAPRAHVHMAFSPERLAEGQAIRDLQSIPILVGGMDAEASEACADFWRGAIPTIDVMALTSPEAAEMVKLADNLWIDLNVALANELAKLADALPYPIDVMEVIGGANSLKKGQHHVNILHPSNGVGGYCLTKDPWFVDALGRRAGIELKIPRASREVNDSMPVHVFGRVDAFLKAKGIAAEDAKVALLGFAFKSNSGDCRFTPVGPLVAALREAGYGDKLTICDPMVTTREATHHGIVLEPDWRKTVEGAHAVLILAGHDAFTAITADDLGDLAAPGALVYDGRIYYPRARINELEARGLSYIGVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL1</accession>
    <name>A0A2M9PEL1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">TIGR02217 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000244">
        <property type="protein sequence ID" value="PJN95963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011740">
        <property type="entry name" value="DUF2460"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09343">
        <property type="entry name" value="DUF2460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02217">
        <property type="entry name" value="chp_TIGR02217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="207" mass="22573" checksum="13AA230F2466136D" modified="2018-04-25" version="1">MSFHEVRFPAPLSVGSSGGPERRTEIVTLKNGFEERNSPWAHSRRRYDAGLGVRSLDDLAEVIAFFEARRGQLYGFRWKDWTDFKSCRPSQAPSPLDQRLGVGDGARREFALVKVYASGTAEYARPIAKPVQGTVVVALDGVATEAVSVDHTTGMLRFQEAPAEGVAVTAGFEFDVPARFDMDRIATSLAGFAAGEVPSIPVVEVRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ5</accession>
    <name>A0A2M9PEZ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000194">
        <property type="protein sequence ID" value="PJN96109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="376" mass="40027" checksum="DE0C0268D6DC0114" modified="2018-04-25" version="1" fragment="single">PADAIRLAHDGRLVDLRLVSIADAEARGIEAVRQDRATYDLPPGDPRAASLTRAVVFGAPDVALMDLPQLTEDQPAHRPLVAAHAVPWPGEMAVFRSPSTDGFELLTTFGSRARIGALVLDFYAGPTSRFDLGNALVVDLLTGTLESVTDLTLFGGANALAIESAPGTWEMVQAGAAELLAPGRYRLTRLLRGQRGSEGAIRNPAPAGARVVMLDTALASLPIAEADLGIPWNWRIGPASRPVSDETYVAQTFAPAGVGLRPFSVAHVEQPWRRPRTPGDLTIQWTRRSRALAADNWGGLEVPLAEELEAYEVEVLDGATVKRVLSTATTSAVYTSAQQTADWGAPLGPGDTLDIRIFQLSALVGRSAPKTVTLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF19</accession>
    <name>A0A2M9PF19_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000182">
        <property type="protein sequence ID" value="PJN96150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008115">
        <property type="term" value="F:sarcosine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046653">
        <property type="term" value="P:tetrahydrofolate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2270.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006279">
        <property type="entry name" value="SoxD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038561">
        <property type="entry name" value="SoxD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04267">
        <property type="entry name" value="SoxD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9688" checksum="3195F303A96ABB88" modified="2018-04-25" version="1">MASLIDCPHCGPRPREEFGIKGAVLPRPAPDAGPEAWMDYVYLRENPRGAHLEYWHHAGGCRRWLVVTRDTATHAVEDVADAAEARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF28</accession>
    <name>A0A2M9PF28_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sigma70_r4_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000180">
        <property type="protein sequence ID" value="PJN96160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r4_2" evidence="1">
        <location>
            <begin position="185"/>
            <end position="232"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="240" mass="26278" checksum="DADAB2E38010E5F2" modified="2018-04-25" version="1">MSIAWHEIRDHLMHSSSNLHFQRSFDAVRRAQAALTPFRDPAALLDGLHGTNGDPARKNLILSALVRAAQGDGPASDCALTLLLLALWPGLDAIRRRSIWRRLGTADEVASDVLARTTEAVRSLDLGRVNWIAATVLRNVERDMIRVRQRDMAREHLASGADPDEVADSGESGIGATGYARLNGAVRKLLGDDALLVIRVAIEGFSQAEVAVELGLTEAAARKRYQRAMRRLHDALEEIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ0</accession>
    <name>A0A2M9PFJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000131">
        <property type="protein sequence ID" value="PJN96320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010905">
        <property type="entry name" value="Glyco_hydro_88"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07470">
        <property type="entry name" value="Glyco_hydro_88"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="24004" checksum="50C3D792669C6E0A" modified="2018-04-25" version="1">MLTAYLDAFATRYQPYKGGAWCYEDGCIYRGLALLHETTGDRRWLDHLKRLADAQVSPEGALKGYEITEFNIDNILSGRALIALHARTGDPRYLEAAGLLGRQLDAHPRTRSGVYWHKSVYPAQVWLDGLYMGLPFQVELGQALREPERVTDALRQFETALRLTWREKTGLYVHGVDEGRLQAWADTETVQRRVQGEGCAGGDPRRGDGRRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK5</accession>
    <name>A0A2M9PFK5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Carboxypeptidase M32</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000130">
        <property type="protein sequence ID" value="PJN96321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004181">
        <property type="term" value="F:metallocarboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001333">
        <property type="entry name" value="Peptidase_M32_Taq"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34217">
        <property type="entry name" value="PTHR34217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02074">
        <property type="entry name" value="Peptidase_M32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00998">
        <property type="entry name" value="CRBOXYPTASET"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="301" mass="32823" checksum="93F89BDFE30C8274" modified="2018-04-25" version="1" fragment="single">LKGTFDHAPQLALSRRIGEALGYDWSAGRLDLAVHPFCSGRLGDVRITTRVDAEDPLGNIYSTIHELGHALYEQGLDPEIALTPAGSASSMGVHESQSRLYENQIGRSRAFAQWLYPQLREAFGDVGLAGAEELHRANNAVATGFIRTEADEVHYNLHVMMRFELERALISGALEVGGLEAAWNARFLEDFGAAVPDAAQGVLQDVHWSVGLFGYFPTYTLGNVYAATLDAAIRAEIPDLDDQVAAGEFGALLDWLRPRVHRRGKLAAPETIIAEAAGRKPEPAFLIAALERKFGELYDLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL8</accession>
    <name>A0A2M9PFL8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S19</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpsS</name>
        <name evidence="7" type="ORF">CNY89_03300</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00531">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020934">
        <property type="entry name" value="Ribosomal_S15/S19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002222">
        <property type="entry name" value="Ribosomal_S19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005732">
        <property type="entry name" value="Ribosomal_S19_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023575">
        <property type="entry name" value="Ribosomal_S19_S15_SF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11880">
        <property type="entry name" value="PTHR11880"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00203">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002144">
        <property type="entry name" value="Ribosomal_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00975">
        <property type="entry name" value="RIBOSOMALS19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54570">
        <property type="entry name" value="SSF54570"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01050">
        <property type="entry name" value="rpsS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00323">
        <property type="entry name" value="RIBOSOMAL_S19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10543" checksum="925A66F7430AAADC" modified="2018-04-25" version="1">MSRSVWKGPFVDSYVLKKAEKSRESGRNEVIKIWSRRSTILPQFVGLTFGVYNGKKHVPVSVSEDMIGQKFGEYSPTRTYYGHSADKKAKRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT4</accession>
    <name>A0A2M9PFT4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(2Fe-2S)-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000106">
        <property type="protein sequence ID" value="PJN96406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fer2_BFD" evidence="1">
        <location>
            <begin position="2"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9234" checksum="27FF33C08F6135F7" modified="2018-04-25" version="1">MIICSCSRVTDGDIRDAIAWMRAADPYVLITPGKIFRALGKAAECGGCIRLFVETMRQDENLAVPAELRGLRPKRRKLTAVEGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW6</accession>
    <name>A0A2M9PFW6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Formate dehydrogenase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_02720</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000105">
        <property type="protein sequence ID" value="PJN96412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019574">
        <property type="entry name" value="NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13187">
        <property type="entry name" value="Fer4_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00929">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 7" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="8">
        <location>
            <begin position="18"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="9">
        <location>
            <begin position="168"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="9">
        <location>
            <begin position="211"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="10">
        <location>
            <begin position="247"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="254"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="257"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="261"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="289"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="566"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="566" mass="61114" checksum="45D804D20BD721B8" modified="2018-04-25" version="1" fragment="single">MTLIREIDFGTPASKAEDMVSLTIDGETVSVPAGTSIMRAAMEMGTEIPKLCASDMLESFGSCRVCLVEIEGRAGTPASCTTPVAPGMVVRTQTDNLTRLRRGVMELYASDHPNDGLTNPVNGLSELHRVAAAVGLSEQRYAPGANHVAAECFEAENPLHMAMDGTNPYFAYDPAKCIVCYRCVRACEEVQGTFALTVEGRGFESRIVAGMNEDFLASECVSCGACVQACPTGSLIEKAVQEIGVPEHSKITTCAYCGVGCTFKAEMRGEQVVRMVPWKDGKANRGHSCVKGRFAYGYATHVERVTKPMVRDKITDPWRETTWEEAIGRVASEFRRIQETHGKGAVGGITSSRCTNEDVFLVQKLIRQGFGVNNVDTCARVCHSPTGYGLKATFGESAGTQDFDSVEASDVILVIGANPTDGHPVFASRMKKRLREGARLIVADPRRIDLVRTPHVEADYHLPLQPGTNVALLTSMAHVIVTEGLVDEGFVRARCDWDEFQAWAAFVAEAHHAPEETARYTGVDPETVRAAARLYATGGNAAIYYGLGVTEHSQGSTTVMAIANLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG19</accession>
    <name>A0A2M9PG19_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Alpha-E domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02265</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000084">
        <property type="protein sequence ID" value="PJN96486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007296">
        <property type="entry name" value="DUF403"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04168">
        <property type="entry name" value="Alpha-E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alpha-E" evidence="1">
        <location>
            <begin position="1"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="35632" checksum="EB23BDBCA8B0E4A7" modified="2018-04-25" version="1">MLSRTAENLYWLARYMERAETMARLLEVGYRMAMMPSTAEGYRNEWASLLQAAGSAEGFAAKFGEEARQRDVETWLFFDRENPSSVVSCIEVARNNGRAVRTALTTEMWDALNGAYLELAAIEREARVDALLPKICDWTKRQGSQLRGATESTHLQNDGYDFINLGYYLERGDNTARLLDVKYYVLLPTTDMVGGSVDTYQWTTLLRALSAYRAFHWAYGGEYTPRKIAHFLILNGACPRSLLHCANKVDTHLVRLSRAYGSDSPAHGQTQEILGELSNAEVEDVIGEGLHEFLTRFINRNGSLGQSVADAYLFGPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG52</accession>
    <name>A0A2M9PG52_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">AI-2E family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_02050</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000075">
        <property type="protein sequence ID" value="PJN96518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="138"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="206"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="229"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="262"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="304"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="352" mass="37274" checksum="3543B53CCCFA31DB" modified="2018-04-25" version="1">MREDSFRNLVLGLALAIMVGWLLWIGRPIILPVVASLIIAYIVLGLADLFARIPVAGPRLPSALRHGLAILTILGAFGALTLVLVGAVSQIIATAPQYQDQLLSLIQKAAVAIGVETEPSWQALRGELFGQISLQRTLLASAASASGILGTFFVVIVYTGFLLAERGVFARKIARLSPDPARVARIRQVIGDINARIGAYLVMKTLINLLLGGLSYGILRLLGIEFAGLWAILIGLFNYIPYLGSALGVLPPVLMAALQFGALAPTMVAAAALIAAQTVVGSFVDPWLMGRSVNLSPFVILVTLVFWSAIWGVSGAILSVPVTAILVIVLSEFQGTRPIAVLLSLDGRVDAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG75</accession>
    <name>A0A2M9PG75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Putrescine ABC transporter permease PotH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01835</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000067">
        <property type="protein sequence ID" value="PJN96555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="95"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="182"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="226"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="96"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="35191" checksum="49C3FFB197AC0295" modified="2018-04-25" version="1">MSALIERVPLLRWTADLLRRIGLDGPGLVIAVPVVWLLVFFLIPFLVVAKISVSEAAIARPPYLPIWEWDGLRLIVNLNFENFAYLWQDPLYVRAYFFSIRVAFVSAVLALLIGYPMAYYIARSPEPRRTFLLMMVVLPFWTSFLLRVYAWQGFLRSNGVINNFLIWIGAIDTPIVMLQTNFAVYLGIVYTYLPFMILPLYATLVKLEESLLEASADLGARPMATFFHVTLPLSMPGIIAGFMLVFIPAIGEFVIPELLGGPDTLMIGRVLWNEFFSNRDWPVASAVAIAMLVAVVVPIMILKGVQARVEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG92</accession>
    <name>A0A2M9PG92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Hly-III family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_01735</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000063">
        <property type="protein sequence ID" value="PJN96573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004254">
        <property type="entry name" value="AdipoR/HlyIII-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20855">
        <property type="entry name" value="PTHR20855"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03006">
        <property type="entry name" value="HlyIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="88"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="163"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="194"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="23323" checksum="D0F8EC6F9B749999" modified="2018-04-25" version="1">MSRRNGVYTQAERRSDAIVHWTGLVLGLTAAPVIVWLALRAPDGTTLVAAAAIYAASLVAMLGASAAYHMSRAPAWRDRLRRLDQSAIYVKIAGAYTPFAVMTGPEAMPFLGGLWAAALVGVGLKVLTARQLFGVTLALYLGMGWAALAVGGPIFERMTPESFRLVLAAGSLYTAGVVFLVWERLPHHYTIWHVFVLAASLFVYAAVLMEVAGFVASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD3</accession>
    <name>A0A2M9PGD3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01650</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000060">
        <property type="protein sequence ID" value="PJN96586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014825465" evidence="2">
        <location>
            <begin position="23"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="56"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7301" checksum="70FE9A9DAE9F29D4" modified="2018-04-25" version="1">MSTLGTTLAFLTAFGAAGAAWAQEQPKTQHPRHLGPCPASARSFATLSEGAEGGPDYDAGLRDRAGRTLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF9</accession>
    <name>A0A2M9PGF9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Microcin ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000052">
        <property type="protein sequence ID" value="PJN96621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="9"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="127"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="167"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="216"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="274"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="321"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="125"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="358" mass="39500" checksum="CCF31FB9C7BB0A8B" modified="2018-04-25" version="1">MAAYILRRLLLIVPTLVGILLVNFILVQFMPGGPVEQVIARLESDTSATGRITGGGSETGGGAQGDYRGAQGLPPEFIADLERQFGFDKPPAERFLLMLKNYLTFDFGESYFRSIRVIDLVLEKMPVSITLGLWSTLLAYLISIPLGIRKAMRDGSPFDTCTSGLIIVAYAIPSFLFAIMLLVLFAGGSFWQIFPLRGLTSDDWAELSLWGKVVDYLWHIVLPVTASTIGAFATLTLLTKNSFLDEIKKQYVVTARAKGLTETRVLYGHVFRNAMLIIIAGFPAVFISVFFGGSLIIETIFSLDGLGRLAFESALQRDYPVVFGTLYVFGLMGLVVGLISDLTYVWVDPRIDFESRET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG7</accession>
    <name>A0A2M9PGG7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Carbamoyl phosphate synthase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01385</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 ATP + H2O + hydrogencarbonate + L-glutamine = 2 ADP + carbamoyl phosphate + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18633"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.5"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000047">
        <property type="protein sequence ID" value="PJN96638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005483">
        <property type="entry name" value="CbamoylP_synth_lsu_CPSase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00098">
        <property type="entry name" value="CPSASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="133"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="27156" checksum="70C37A7A804A6D7E" modified="2018-04-25" version="1" fragment="single">MPKRTDIHSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVVLVNSNPATIMTDPQLADATYIEPITPEVVAKIIEKERPDALLPTMGGQTALNTALALADMGVLEKYGVELIGAKRAAIEMAEDRKLFREAMDRIGLENPRATIANSMAEAMAAIEYVGLPSIIRPAFTMGGTGGGIAYNREDYERICKTGLDASPVSQILIDESLLGWKEFEMEVVRDKADNCIIVCSIENIDPMGVHTGDSITVAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM5</accession>
    <name>A0A2M9PGM5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">4Fe-4S Mo/W bis-MGD-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00980</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000033">
        <property type="protein sequence ID" value="PJN96705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1 3" id="KW-0408">Iron</keyword>
    <keyword evidence="2 3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="4">
        <location>
            <begin position="3"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="10"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="13"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="32055" checksum="40F5B597E179791C" modified="2018-04-25" version="1">MAGVPIRTTCPYCGVGCGVLATPDGRGGVAVAGDPEHPANFGRLCSKGSALGQTVGLEGRLLAPRIHGREASWEEALDLIAGRIGTAIATKGPESVAIYGSGQLLTEDYYVANKLMKGFIGTANIDTNSRLCMASSVAGHKRAFGTDTVPGVYEDLEEADLVVLVGSNLAWCHPVIFQRIAAAKAARPGMKVVTVDPRRTATTDLADLHLGLRADTDVALFNALLAEIDRRGAIDREYVTNHVNGLNAALDTAREGDPETTGLDPADLAAFFDLWIGTEKVVTVFSQGPRTRSWRSWAPTARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV8</accession>
    <name>A0A2M9PGV8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">4-oxalomesaconate tautomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000016">
        <property type="protein sequence ID" value="PJN96779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7717" checksum="FC38CD016B28822B" modified="2018-04-25" version="1" fragment="single">VSVAMAATLRDSLVGAALPGFRLPAHMTLEHPTGRMDVRVSVPEGAVDPAVYVMRTCRRLFEGAVLARRRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH24</accession>
    <name>A0A2M9PH24_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000005">
        <property type="protein sequence ID" value="PJN96845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="68"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14134" checksum="CD6832B91E516BDD" modified="2018-04-25" version="1">MARRSVAEITVQDLQRAPGPIRRPLNGIPRQGTRDRAHGDQAGKPGPFLGEEQNLFDTQVFARAERRLAEENGDAQEQAKVGGGEQGDRQAQIDARKVAAADLGLRRRMRPKLENKLNLYSLIVIRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH54</accession>
    <name>A0A2M9PH54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9622" checksum="A14068AD139E9CA6" modified="2018-04-25" version="1">MSDKINWGGAAFPCEGGEGSGLYPDPGMSMRDWFAGNAPVTAENVTYAMGSTIWDLSSESGRAAFFAVMALLRYEYADAMLAERQKGVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G4</accession>
    <name>A0A2M9P4G4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EAL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004558">
        <property type="protein sequence ID" value="PJN92432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="25" mass="2973" checksum="BE63BA06C90221DB" modified="2018-04-25" version="1" fragment="single">MGYLSRFDFDVIKIDRAFIQGLDRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q9</accession>
    <name>A0A2M9P4Q9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphoglycolate phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004229">
        <property type="protein sequence ID" value="PJN92527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5180" checksum="CC2582E839B67C34" modified="2018-04-25" version="1" fragment="single">MIGDSETDALTAKAAGAPFLLHLGGYNHLPPESLTSAGVFAHWDELPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T5</accession>
    <name>A0A2M9P4T5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_28555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004103">
        <property type="protein sequence ID" value="PJN92571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="2"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9713" checksum="7457290FB6435A8B" modified="2018-04-25" version="1" fragment="single">RHLIALCVEHDVRILFTSTSEVYGRNPAVPWSEDGDRVLGATSVDRWSYAASKGVCEQMLYGVHRKTGLPFSIVRFFNVYGPRQTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V5</accession>
    <name>A0A2M9P4V5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004151">
        <property type="protein sequence ID" value="PJN92555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8548" checksum="C2C5CB2EF92A62EC" modified="2018-04-25" version="1" fragment="single">SFNDPASGILRVGNSGSAFSNLGDPVKYYPPIGGQWGYTGAAGTALTLAAGNQPYASADTDELPVLVERMGRRGVQFSAAGDGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y2</accession>
    <name>A0A2M9P4Y2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Calcium-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19200</name>
        <name evidence="3" type="ORF">CNY89_19220</name>
        <name evidence="2" type="ORF">CNY89_22685</name>
        <name evidence="1" type="ORF">CNY89_28195</name>
    </gene>
    <organism evidence="1 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003984">
        <property type="protein sequence ID" value="PJN92611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002347">
        <property type="protein sequence ID" value="PJN93210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001581">
        <property type="protein sequence ID" value="PJN93666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001577">
        <property type="protein sequence ID" value="PJN93670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7736" checksum="7778EE3DB605FA69" modified="2018-04-25" version="1" fragment="single">MATIRVSSETEFTKALLTANGGDTILLKAGTYSDLDIKDNRQNDLDFSSTVTIRSEDPNNRAVINELFVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y7</accession>
    <name>A0A2M9P4Y7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Disulfide bond formation protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_28225</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003996">
        <property type="protein sequence ID" value="PJN92606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003752">
        <property type="entry name" value="DiS_bond_form_DsbB/BdbC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023380">
        <property type="entry name" value="DsbB-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02600">
        <property type="entry name" value="DsbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158442">
        <property type="entry name" value="SSF158442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="37"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7916" checksum="619EA97D51E3D7D8" modified="2018-04-25" version="1" fragment="single">AWWPGPDTCTGPALGAMTADQLLRQIEAAPVVRCDEIAWSFLGLSMAAWNGLASAALCVLWLRAYASSSASQYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z8</accession>
    <name>A0A2M9P4Z8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003982">
        <property type="protein sequence ID" value="PJN92612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7968" checksum="8C4380188A2B8343" modified="2018-04-25" version="1" fragment="single">MSTGGGKMLANRRADRRVLHFRDADAWMAYNDRFGAADPFRSTAWSAAAGTNASHPCRPAAARCWPTGARIAAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P528</accession>
    <name>A0A2M9P528_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_28060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003931">
        <property type="protein sequence ID" value="PJN92625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="10130" checksum="B20AB127728672BD" modified="2018-04-25" version="1" fragment="single">RGPQLQAAVERTSFDLGAVVRGDPLTIYLVLPPHMLSSHGRFLRLWISTLLALIIRRRRRPERATLFVLDEAAQLGTLEELRTSLTLLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P565</accession>
    <name>A0A2M9P565_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003839">
        <property type="protein sequence ID" value="PJN92660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7222" checksum="252A0E2332844CFA" modified="2018-04-25" version="1">MLASIEVLHELKKKDDDVYGWAKDRKESLFVEIDDGVQAEIVRIMQTYPKLVDTGKGKSGAIRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C1</accession>
    <name>A0A2M9P5C1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003682">
        <property type="protein sequence ID" value="PJN92720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7395" checksum="4BA29D2D2423582E" modified="2018-04-25" version="1" fragment="single">METHLRTGVVAAALFLPSALPVSGDEIAVGETMLTYEEVGTGPVVLFLHGAVSDHRVWGGIRDRVAERH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D5</accession>
    <name>A0A2M9P5D5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003607">
        <property type="protein sequence ID" value="PJN92747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10477" checksum="464875F2FF725F91" modified="2018-04-25" version="1" fragment="single">MTTAPPTARQRFNPRERAAALPSSYTTTWDTTGGERTELIVGMLRASKALVLLKRNVAAIRQYVPPPDLETLDCDYAASGILSIWSRRNWAGER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D6</accession>
    <name>A0A2M9P5D6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF302 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003591">
        <property type="protein sequence ID" value="PJN92752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.310.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005180">
        <property type="entry name" value="DUF302"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035923">
        <property type="entry name" value="TT1751-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016796">
        <property type="entry name" value="UCP021774"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03625">
        <property type="entry name" value="DUF302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021774">
        <property type="entry name" value="UCP021774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103247">
        <property type="entry name" value="SSF103247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF302" evidence="1">
        <location>
            <begin position="36"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9362" checksum="A28A653A66AADC45" modified="2018-04-25" version="1" fragment="single">MDYTINRLIADAEFDAVEARTRAALTDNGFGILTEIDVKATMKKKLDVEMPAYRILGACNPKMAHQAIGIEPRVGAMLPCNVILR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D9</accession>
    <name>A0A2M9P5D9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003628">
        <property type="protein sequence ID" value="PJN92740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="6244" checksum="92C01C1BEAC0C649" modified="2018-04-25" version="1" fragment="single">MIIIDEAHHSAAASWQRVIERFNQAKVILLTATPFRSDRQELDGELVFRYPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F3</accession>
    <name>A0A2M9P5F3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Cobalamin biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_26885</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; adenosylcobalamin biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the CobD/CbiB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003564">
        <property type="protein sequence ID" value="PJN92759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00148"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048472">
        <property type="term" value="F:threonine-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004485">
        <property type="entry name" value="Cobalamin_biosynth_CobD/CbiB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34308">
        <property type="entry name" value="PTHR34308"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03186">
        <property type="entry name" value="CobD_Cbib"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0169">Cobalamin biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022573"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN92759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10460" checksum="EEB6009FAF5E056A" modified="2018-04-25" version="1" fragment="single">VPGVSRAAIESLAENFSDGVVAPVFWLAVAGLPGVAAYKAINTADSMIGHRTDRHRAFGWAAARTDDLVPGVSRAAIESLAENFSDGVVAPVFWLAVAGLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G4</accession>
    <name>A0A2M9P5G4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transposon DNA-invertase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_26765</name>
        <name evidence="7" type="ORF">CNY89_29940</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004621">
        <property type="protein sequence ID" value="PJN92412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003532">
        <property type="protein sequence ID" value="PJN92769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006118">
        <property type="entry name" value="Recombinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00397">
        <property type="entry name" value="RECOMBINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="6">
        <location>
            <begin position="2"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-serine intermediate" evidence="4 5">
        <location>
            <position position="10"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR606118-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN92769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4359" checksum="F85970C1B87D8281" modified="2018-04-25" version="1" fragment="single">MHALGYARVSTDDQHLDRQRHLLEAQHCDRIVEEVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H7</accession>
    <name>A0A2M9P5H7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003459">
        <property type="protein sequence ID" value="PJN92792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002559">
        <property type="entry name" value="Transposase_11"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01609">
        <property type="entry name" value="DDE_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_1" evidence="1">
        <location>
            <begin position="2"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11766" checksum="D39D408F194842A7" modified="2018-04-25" version="1" fragment="single">GLVVHAADIQDRDGAPAVLKSIRHACPWLRHVFADGGYAGPKLRGALDRMGEWTLQIVKRSDTAKGFEVLPRRWVVERTFAWLGRCRRLAKDWEKSIASAEAWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P605</accession>
    <name>A0A2M9P605_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AbrB family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_20735</name>
        <name evidence="4" type="ORF">CNY89_21580</name>
        <name evidence="3" type="ORF">CNY89_24950</name>
    </gene>
    <organism evidence="3 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002978">
        <property type="protein sequence ID" value="PJN92963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002069">
        <property type="protein sequence ID" value="PJN93340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001887">
        <property type="protein sequence ID" value="PJN93445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007159">
        <property type="entry name" value="SpoVT-AbrB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037914">
        <property type="entry name" value="SpoVT-AbrB_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04014">
        <property type="entry name" value="MazE_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00966">
        <property type="entry name" value="SpoVT_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89447">
        <property type="entry name" value="SSF89447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01439">
        <property type="entry name" value="lp_hng_hel_AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51740">
        <property type="entry name" value="SPOVT_ABRB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SpoVT-AbrB" evidence="2">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51740"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5043" checksum="9B4F34810ECECA63" modified="2018-04-25" version="1" fragment="single">MATATVTSKGQITIPLKVRSDMGLTPGDRVDFVRMDDGHYAVVPASH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P652</accession>
    <name>A0A2M9P652_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002814">
        <property type="protein sequence ID" value="PJN93031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="19"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11244" checksum="E31F98CAA8080C7F" modified="2018-04-25" version="1" fragment="single">GLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQLSFETFLVYGAFCVMGFSNVFLYLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A3</accession>
    <name>A0A2M9P6A3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002756">
        <property type="protein sequence ID" value="PJN93049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6649" checksum="13810D7CE06C5998" modified="2018-04-25" version="1">MERRSTDVMLGRAKLMGADLRGAVLSGVDLTNADFRNTTWAGAKSGAPPPQSFLRHPRRPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B9</accession>
    <name>A0A2M9P6B9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002736">
        <property type="protein sequence ID" value="PJN93058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006448">
        <property type="entry name" value="Phage_term_ssu_P27"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05119">
        <property type="entry name" value="Terminase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9473" checksum="02C565FD515E8E46" modified="2018-04-25" version="1" fragment="single">LLYKTPSGHVQQSPLLGIINKQLELMGRYLIELGMTPAARSRVKVSEDAAPLQGPLTIEFVSGRKLTDYSDEELEELLRHKPADV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R0</accession>
    <name>A0A2M9P6R0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002261">
        <property type="protein sequence ID" value="PJN93254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5596" checksum="C04A2A5E54739A2D" modified="2018-04-25" version="1" fragment="single">PSERQLPSGDGLPPPSQPFLDRMEPDLPSAKRPEPDQMDLETYLACRDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P719</accession>
    <name>A0A2M9P719_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002097">
        <property type="protein sequence ID" value="PJN93327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10712" checksum="3D608F20C55732F7" modified="2018-04-25" version="1">MGQGSQGVAVRRNRRGVQAEIVRIMQTYPKLVDTGKGKSGGDPFVIAQALAHNPRLVIVTQEAGGSADKPKIPYVCDQERLRHIDLLALIEEEDWTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P731</accession>
    <name>A0A2M9P731_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21760</name>
        <name evidence="2" type="ORF">CNY89_23765</name>
        <name evidence="1" type="ORF">CNY89_29020</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004262">
        <property type="protein sequence ID" value="PJN92516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002627">
        <property type="protein sequence ID" value="PJN93097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002115">
        <property type="protein sequence ID" value="PJN93315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="5027" checksum="95455D7EE1A7406C" modified="2018-04-25" version="1" fragment="single">MTDEMMTLRGLVEKTPDADLLREMIGFAAERLMELEVGGLTGAAWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P746</accession>
    <name>A0A2M9P746_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DDE_Tnp_IS66 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002032">
        <property type="protein sequence ID" value="PJN93362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="2">
        <location>
            <begin position="1"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="68"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="108"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="133"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18927" checksum="C678091F37309910" modified="2018-04-25" version="1" fragment="single">IAGLYAVEKAVRGHSPDARLAARRQLSAPIVAAMKPWLEKQLSQLSSGSKLAEHICYTLGAWGRPDPLPRRRASRAGHQLHRESHPSGGSDAQEQPLRRPRDRHRALGAARLPRRHLQAQRRRARRLSDGNSRRHHQRPPDEAHRRPHALALPASVNRRHVGPRPSAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M2</accession>
    <name>A0A2M9P7M2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001787">
        <property type="protein sequence ID" value="PJN93519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10054" checksum="99B6F820DA80FB31" modified="2018-04-25" version="1" fragment="single">MFAPHLIVIGNDLESNDPSAEPIDKAINDEFRNLMDGREKRGQGIFSYEELADASSFISRAQSAPWRDTPTSGLQGRSDYAMRRQTPHTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A9</accession>
    <name>A0A2M9P8A9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Heme exporter protein C</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Cytochrome c-type biogenesis protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ccmC</name>
        <name evidence="10" type="ORF">CNY89_18475</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the CcmC/CycZ/HelC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001465">
        <property type="protein sequence ID" value="PJN93776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015232">
        <property type="term" value="F:heme transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002541">
        <property type="entry name" value="Cyt_c_assembly"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003557">
        <property type="entry name" value="Cyt_c_biogenesis_CcmC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045062">
        <property type="entry name" value="Cyt_c_biogenesis_CcsA/CcmC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30071">
        <property type="entry name" value="PTHR30071"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01578">
        <property type="entry name" value="Cytochrom_C_asm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01386">
        <property type="entry name" value="CCMCBIOGNSIS"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01191">
        <property type="entry name" value="ccmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="37"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrom_C_asm" evidence="9">
        <location>
            <begin position="14"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN93776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="24935" checksum="DC9827065B38A1F0" modified="2018-04-25" version="1" fragment="single">AVLPALWGLTALALGAGLVWGFFLTPDDYEQGATVKILFIHVPAALMAINAWLMMLVASLIWFIRRHHVSALAARAAAPVGAVMTVLAIVTGALWGQPMWGAWWVWDPRLTSFFVLLVFYFGYIALWAAVEEPDKAADLTSIVCFVGSVFALLSRYAVFFWSQGLHQGPSLSLDRQENVHDVFYYPLLLCIAGFVLLFLSLVLLRTRTEIRARRLRALLALEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C1</accession>
    <name>A0A2M9P8C1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001450">
        <property type="protein sequence ID" value="PJN93792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13496" checksum="DC3BD8B637665628" modified="2018-04-25" version="1">MDGTTALQENAQFLLTDRGRLVERLEVLCGPTGRRSWPDALKARIVAESFETGARVVEVARRHSVSPQQVTAWRRQARQGRLALPAEEETAFAGLLVEDARPAPSVLAQRPIEIEADGVIVPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H1</accession>
    <name>A0A2M9P8H1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Translation initiation factor IF-3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_18040</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the IF-3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001405">
        <property type="protein sequence ID" value="PJN93847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036788">
        <property type="entry name" value="T_IF-3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036787">
        <property type="entry name" value="T_IF-3_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019813">
        <property type="entry name" value="Translation_initiation_fac3_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001288">
        <property type="entry name" value="Translation_initiation_fac_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019815">
        <property type="entry name" value="Translation_initiation_fac_3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019814">
        <property type="entry name" value="Translation_initiation_fac_3_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10938">
        <property type="entry name" value="PTHR10938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00707">
        <property type="entry name" value="IF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05198">
        <property type="entry name" value="IF3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54364">
        <property type="entry name" value="SSF54364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55200">
        <property type="entry name" value="SSF55200"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00168">
        <property type="entry name" value="infC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00938">
        <property type="entry name" value="IF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4 8" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3 4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IF3_N" evidence="7">
        <location>
            <begin position="18"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="IF3_C" evidence="6">
        <location>
            <begin position="94"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000646"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF05198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14268" checksum="57BE1EE4840ACF18" modified="2018-04-25" version="1" fragment="single">MARRPHNAPPTRDTGPRVNERVRAPEIRLIGAEGENIGLITPEKALALAEQAGLDLVEISPNATPPVCKIMDFGKYKYETQKKESEARKKQKIIEIKEIKFRPNTDTHDYEVKMRSVIKFLEGGDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H9</accession>
    <name>A0A2M9P8H9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001417">
        <property type="protein sequence ID" value="PJN93830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="12276" checksum="4896EFCCCB531B2C" modified="2018-04-25" version="1" fragment="single">MKDLIEGRANGNGFESVRTIRDAYRRQLVGMIHELLAEHGTNIAGEVRNKAQLKQVVQELHGQASGSAVATRIARAVQAAQTRARTLFNAHGGDIGELADFGLPHSHEIGKIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I0</accession>
    <name>A0A2M9P8I0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001410">
        <property type="protein sequence ID" value="PJN93841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6784" checksum="A5B521854ACE3685" modified="2018-04-25" version="1">MIAAEFLLELLMRLLMIGHIARVAGSAAFGHEGQLSVRESAAVNHTGAARGSFLLTRALSPVGVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K2</accession>
    <name>A0A2M9P8K2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17945</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001392">
        <property type="protein sequence ID" value="PJN93862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3889" checksum="71008F697E424430" modified="2018-04-25" version="1" fragment="single">MVQTCVVHLVRHSLNFCSWKDRKAVAAKLREVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M3</accession>
    <name>A0A2M9P8M3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sarcosine oxidase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001378">
        <property type="protein sequence ID" value="PJN93881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.440">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042204">
        <property type="entry name" value="2Fe-2S-bd_N"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="20230" checksum="367796C230280D19" modified="2018-04-25" version="1" fragment="single">MTSRTASWRLANRGRVDHGRPVRFTFDGKGYTGLAGDTLASALLANGVHLMGRSFKYHRPRGVVSAGSDEPNALVGTRRGPGRFEPNTRATIQELREGLEATSQNRWPSLAFDLGAINDNLGSLFSAGFYYKTFMWPRAFWDRVYEPVIRNAAGLGVSPTETDADRYASRFAHTDVLIVAPAPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U8</accession>
    <name>A0A2M9P8U8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage terminase small subunit P27 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001304">
        <property type="protein sequence ID" value="PJN93963.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006448">
        <property type="entry name" value="Phage_term_ssu_P27"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05119">
        <property type="entry name" value="Terminase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01558">
        <property type="entry name" value="sm_term_P27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93963.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10307" checksum="C6D36CF142108D13" modified="2018-04-25" version="1" fragment="single">MTGAPRRSVPRSKAALPRCPDHLTPPAAREWRRVASELHGMGVLTTIDRAALAAYCQAYGRWVEAEERMRDGQLLYKTPSGHVQQSPLLGIIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W8</accession>
    <name>A0A2M9P8W8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LLM class flavin-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001295">
        <property type="protein sequence ID" value="PJN93978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="20433" checksum="A50A6D42BBA5540B" modified="2018-04-25" version="1" fragment="single">MEIGLYTFGDVGKDAHTGRLVGPAERLTQLVEEITLADQVGLDVFGLGEHHRPDYAVSAPAVVLAAAATQTKRIRLTSAVTVLSSDDPIRVFQQFATLDGLSGGRAEIMAGRGSFIESFPLFGYDLDDYDALFSERLALLMQLNEAERLTWPGTDHTPKVQGRGVYPRPANGRLPIWLAVGGTPNSVAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y5</accession>
    <name>A0A2M9P8Y5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gfo/Idh/MocA family oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001293">
        <property type="protein sequence ID" value="PJN93979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="301"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="301" mass="34083" checksum="9C447D9651D1BA29" modified="2018-04-25" version="1" fragment="single">MNIGIIGCGYVCDTYMSTWPQHPNLVIRGVTDIDPARAEIISKLYGLRRYASNEELLADPEIDIVVNLTSIESHTEVTRQILQAGKHVYSEKPLTMDFEQGKALVDLAREKGVLLSCAPCNTLSDTTQTMWRAVRDGLVGDVRMIYAEMDDNPIYLMSPEEWRSRSGAPWPYQHEYEAGCTIEHVGYHLTWLCAMFGPVETVTAFSKWTLPDKTDAPLNPKDTPDFSVACLDFKSGVTARVTCSIGAPWDHRMRIIGNQGMLSADTYRHYQCPVYLERFTKLSMNARKSYTVRNSNLLQWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P934</accession>
    <name>A0A2M9P934_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YkuD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001234">
        <property type="protein sequence ID" value="PJN94057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YkuD" evidence="1">
        <location>
            <begin position="11"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7483" checksum="A8CCE42A07B723E1" modified="2018-04-25" version="1" fragment="single">DRLYDLVAVLDWNRAPVRAGRGSAIFLHAWRRPRWPTAGCVAFDPRDLAWILARWTPRSRVVVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P975</accession>
    <name>A0A2M9P975_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001218">
        <property type="protein sequence ID" value="PJN94081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021322">
        <property type="entry name" value="DUF2924"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11149">
        <property type="entry name" value="DUF2924"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="17155" checksum="4A619A9F4C9EF336" modified="2018-04-25" version="1">MMKSDPIPARLAALKSMSVPQLKSEWQTIFATSAPNNSRAFLETRLAYRIQELTYGGPDRETRRMLDLLADEVSGTLTRKSQIADPRNPVVGTRLIREWNGVEHTITVLRDGFDWQGRPYKSLSAIARAITGTRWNGYRFFGLRERKRGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P984</accession>
    <name>A0A2M9P984_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Branched-chain amino acid transporter AzlC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001209">
        <property type="protein sequence ID" value="PJN94091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3605" checksum="E6FBE39E8A0973B1" modified="2018-04-25" version="1" fragment="single">GLDMAEILGMSVLVIAGASQITAVQLMSDQAPTSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C8</accession>
    <name>A0A2M9P9C8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the FrmR/RcnR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001180">
        <property type="protein sequence ID" value="PJN94130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003735">
        <property type="entry name" value="Metal_Tscrpt_repr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038390">
        <property type="entry name" value="Metal_Tscrpt_repr_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33677">
        <property type="entry name" value="PTHR33677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02583">
        <property type="entry name" value="Trns_repr_metal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005260"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10608" checksum="E6ADD83B993CB5AD" modified="2018-04-25" version="1">MTKPMTHQTHPDIVKRLKRAEGHLRSVIAMIEEGRPCLELATQMQAVERAIAQAKRTLIEDHLDHCLAQVAQPLGDEQRREIDEFRQIAKFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H0</accession>
    <name>A0A2M9P9H0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001145">
        <property type="protein sequence ID" value="PJN94180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8331" checksum="152AB54D5555D902" modified="2018-04-25" version="1">MHKQNEDAVREDWAVQIMQDAALALDLSDQDMSEPYVPEDCTRSGAFDVEYAVIGGKRRTPPVPVRMRRRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S1</accession>
    <name>A0A2M9P9S1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">pgsA</name>
        <name evidence="13" type="ORF">CNY89_15540</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="10">Phospholipid metabolism.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="11">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001085">
        <property type="protein sequence ID" value="PJN94261.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008444">
        <property type="term" value="F:CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000462">
        <property type="entry name" value="CDP-OH_P_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004570">
        <property type="entry name" value="Phosphatidylglycerol_P_synth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01066">
        <property type="entry name" value="CDP-OH_P_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000847">
        <property type="entry name" value="Phos_ph_gly_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00560">
        <property type="entry name" value="pgsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00379">
        <property type="entry name" value="CDP_ALCOHOL_P_TRANSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="9" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 11 13" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 12" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="74"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="123"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="167"/>
            <end position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00025707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU003750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94261.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22874" checksum="6DDE9522A3383C31" modified="2018-04-25" version="1">MRWTIPNILTVFRLAAAPGVALAFVIFHRPTADWVALSLFILAALTDFIDGKLARAWGQESNFGRMLDPIADKAMVIIALSMIVGLSGIHPLILLPIAFIMLREVFVSGLREFLGSNAGRLKVTYLAKWKTTAQMVAIPVLLLAGLFDYDRRTGQIWVSSWFHDWATWLLGNAGLVLIWVAGLLTVMTGADYLMKAMPYLRDRNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U2</accession>
    <name>A0A2M9P9U2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Pterin-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15290</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001057">
        <property type="protein sequence ID" value="PJN94306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042558">
        <property type="term" value="P:pteridine-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000489">
        <property type="entry name" value="Pterin-binding_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50972">
        <property type="entry name" value="PTERIN_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pterin-binding" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50972"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7949" checksum="70FE7FF7C92F995A" modified="2018-04-25" version="1" fragment="single">HGLRDPVRGLAQAVHRQPGRRARSLRRTPGSIAVGLEALRQGAQVIRVHDVAETRQALALWAAVNDAAGTGLPQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W9</accession>
    <name>A0A2M9P9W9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA polymerase sigma factor RpoD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_15110</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001039">
        <property type="protein sequence ID" value="PJN94338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00963">
        <property type="entry name" value="Sigma70_RpoD_SigA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007624">
        <property type="entry name" value="RNA_pol_sigma70_r3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007631">
        <property type="entry name" value="RNA_pol_sigma_70_non-ess"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028630">
        <property type="entry name" value="Sigma70_RpoD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04546">
        <property type="entry name" value="Sigma70_ner"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04539">
        <property type="entry name" value="Sigma70_r3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00715">
        <property type="entry name" value="SIGMA70_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="3">
        <location>
            <begin position="245"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="200"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="398" mass="46009" checksum="4A459A9B004B3C4F" modified="2018-04-25" version="1" fragment="single">RRARPTDEDEDEITPSSPPAREEEPDEEDEAGALSLAAMEAALKPQVLETLDRIATDYARLAEMQDNRMSATLNQDTSFTSHQEREYQRLRSEIVELVNSLHLHANRIDQLVEQLYRINRQIMTLDGAMVKLADQARINRQEFLEEYRGAELEPGWLDRVSKRKSRGWEQLTSRYRDKAEEIRGEMAEVGQYVGVDISEYRRIVNQVQKGEKESRQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEELAEKLQMPLEKVRKVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAILPLDSAIQGNLKETTTRVLASLTPREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X9</accession>
    <name>A0A2M9P9X9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA polymerase factor sigma-32</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001035">
        <property type="protein sequence ID" value="PJN94346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r4" evidence="1">
        <location>
            <begin position="11"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04545"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8797" checksum="AE83FE9139C025F2" modified="2018-04-25" version="1" fragment="single">IARVRGWLADAMATLNARERMIIVERKLRDDPRTLESLGAELGLSKERIRQLEAQALQKLRRRLENVTGSAAETLVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y7</accession>
    <name>A0A2M9P9Y7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001029">
        <property type="protein sequence ID" value="PJN94356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6888" checksum="B54522DE9B045BB2" modified="2018-04-25" version="1">MDRNDQQAIEGLFQRLAEASQQVSRWSTAPTRRCLIFANATTMTISTNDLRSTATRLDRAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z2</accession>
    <name>A0A2M9P9Z2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type III effector HopL1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001031">
        <property type="protein sequence ID" value="PJN94354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017030">
        <property type="entry name" value="Vir_effector_SfrC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10139">
        <property type="entry name" value="Virul_Fac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11571" checksum="DAD551A5B3C7195A" modified="2018-04-25" version="1" fragment="single">MPHPALVPGAVAVVTPLEAVYELRDYVERNLRDHLLAGEIGEIYWNFLEETLPFLDAAGRARALGPLWAELEEFGDLYQTLKRALDQLGHPAEVFTSLGALADR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA59</accession>
    <name>A0A2M9PA59_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage major capsid protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000993">
        <property type="protein sequence ID" value="PJN94417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024455">
        <property type="entry name" value="Phage_capsid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05065">
        <property type="entry name" value="Phage_capsid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01554">
        <property type="entry name" value="major_cap_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="27736" checksum="04E01DD5176DCA3D" modified="2018-04-25" version="1" fragment="single">PPLADRRRPALKVESLGATVLRGLVGNLELPKLSESGTAAWIVEHADAPRSDPQFSKVAMGPKTVAAEYAISRRMLLQSYVALEPILRADLGYLLMQRLDAAAIRGGGANEPDGILETAGVAQLADAALSSDLTADLIAALEQDDVTGTTGFLTHPAVMNRARKVKDADGHVIPLGELFHGKPVEATTQAPITTAAAGGDPAKHPLVYGEWASLVIGYWSAVDILTNPYHSAVASKGGAMIHAFLDADVVVRHPEGFVWAEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA0</accession>
    <name>A0A2M9PAA0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000975">
        <property type="protein sequence ID" value="PJN94441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="289" mass="30348" checksum="96A8FADA84F32559" modified="2018-04-25" version="1" fragment="single">MLIANTFSAAGRGTAALELPPSLEGSGLLVGWSMEHERGKAPMGFSFGDPEATPAMGFVDPILMDGEGHLLTIAPTGAGKGVGCIVPALLRYMGSAIVLDPKGENASITARWRRSNGQQVVVLDPMGLTGQESGTLNPLDLIDPAAATGVDDAAALVTALLPNSLDDGKNTFWVSRARQLLLALILHAVTDLPPNERTLTKVRQLASRLAADPDGVSRSFAASRHPEVRMIQGNLQISARETLGGIVAFAQEGVDFLRGPQLQAAVERTSFDLGAVVRGDPLTIYLVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF7</accession>
    <name>A0A2M9PAF7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L28</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpmB</name>
        <name evidence="6" type="ORF">CNY89_13960</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL28 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000924">
        <property type="protein sequence ID" value="PJN94530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00373">
        <property type="entry name" value="Ribosomal_L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034704">
        <property type="entry name" value="L28p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026569">
        <property type="entry name" value="Ribo_L28/L24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037147">
        <property type="entry name" value="Ribo_L28/L24_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001383">
        <property type="entry name" value="Ribosomal_L28"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13528">
        <property type="entry name" value="PTHR13528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00830">
        <property type="entry name" value="Ribosomal_L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="SSF143800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00009">
        <property type="entry name" value="L28"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10439" checksum="4F744DC276496A7D" modified="2018-04-25" version="1">MSRRCELTGKGVMVGNNVSHANNKTRRRFLPNLNEVTLTSESLGQTHRFRISAAALRSVDHRGGLDAFLAKAADDELSPKALKLKRDIAKAAQPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM8</accession>
    <name>A0A2M9PAM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000895">
        <property type="protein sequence ID" value="PJN94579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="269" mass="29842" checksum="554076FAB68755F6" modified="2018-04-25" version="1" fragment="single">MATIDVIIPCYGYGRFLEQCVDSVLTQDGPDLRVLILDDASPDETPEVSDLLIRKDRRVSCIRHPSNRGHIATYNEGLDWANADFTLLLSADDWILPGAFVRAITVMESDASVGFVHGGAIEHYEGEDLVDRASPGPPWVVQDSETFLGECRHCNPVATCTAVVRTSLQKRIGGYRAELPHSGDLEMWMRFAAHGSVGRVNVNQGVYRRHARNMSIEYGRSPLLDLRQREAAIDFFLQADGHRFADPGALRKMLRRGLAESAMYRAAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ0</accession>
    <name>A0A2M9PAZ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyrroloquinoline quinone biosynthesis protein PqqE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12900</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000818">
        <property type="protein sequence ID" value="PJN94706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="43" mass="4634" checksum="5322B2DA1AEF4A0F" modified="2018-04-25" version="1" fragment="single">AATDPVCVKSPLHGRLEELAAGFSEGAPTELIWRRMREAEPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB0</accession>
    <name>A0A2M9PBB0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000755">
        <property type="protein sequence ID" value="PJN94819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="91"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="91"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13580" checksum="B5C15203A1013F65" modified="2018-04-25" version="1">MPVNACDLAEDVTIRYPDLVNLYGCAVGEGSQIGPFVEIQKGSRIGARCKISSHSFVCEGVTIEDEVFVGHGVMFTNGLLPRATNLDGSLQRRSAGATPLSVSKRSSAEASCEKPAVPASIESRRLRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG0</accession>
    <name>A0A2M9PBG0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Type II secretion system protein GspF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_11875</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the GSP F family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000721">
        <property type="protein sequence ID" value="PJN94874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.81.30">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003004">
        <property type="entry name" value="GspF/PilC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018076">
        <property type="entry name" value="T2SS_GspF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042094">
        <property type="entry name" value="T2SS_GspF_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30012">
        <property type="entry name" value="PTHR30012"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00482">
        <property type="entry name" value="T2SSF"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="87"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="138"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="294"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSF" evidence="8">
        <location>
            <begin position="1"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="domain" description="T2SSF" evidence="8">
        <location>
            <begin position="191"/>
            <end position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="34408" checksum="A09D961AF015A88D" modified="2018-04-25" version="1">MRIEDALRTVSQQSAPRVAALLLNIRAAVLDGRSLGQALNDYPHVFSEYYRASVAAGEQSSQLGQVMLHLAAFVENRGRNAQSVQLALLYPALLATVSLGIVTLLMTYVMPDIIRVFTSRGADLPLLTRGLIVLSEGLRAYGLAALLAMALGLLGFRRWLAAPRNRLAFHRFLAENPVTAHFVIRVNSAQFSGTLATLVRSHVPLVEALAAAGAATPNLHIRQSLEEATSRVREGASLRDAIGAAGCFPPMLVAMIGSGEAVGNLGEALASAADDQQRDLDAWVRTMVALVEPAILLVMGGLVMMMVLAILLPIISMNDLAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG4</accession>
    <name>A0A2M9PBG4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000723">
        <property type="protein sequence ID" value="PJN94869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="8708" checksum="34541BBFA96BD53B" modified="2018-04-25" version="1" fragment="single">MVIPRMKKVAVSPACHGIQSADAPALILAQTSSRRAALTFTPGSAMRSASSFGPACHGIQSADAPALILAQTSSRRAALTFTPGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW1</accession>
    <name>A0A2M9PBW1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000638">
        <property type="protein sequence ID" value="PJN95036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="361" mass="39240" checksum="7FDD23F0649CA8FF" modified="2018-04-25" version="1" fragment="single">GSLMNNSQEPPSWSHHEYSRHRQRARVLHEGSMLPETLILCPAPGSEAMRLALEAARRVYDESGLSEEEREQDMRLQRQFLAFVRGEMPDFAHAPAAGGATPNVVLQNRLIGHFADKAQLREEIHIHLLKVRFSGKMVVEAGSDTGRQSQMPEPEPPRVKPTSALLGHLAPPERPAGLCVVAPLIAGFPSAGIAEAVAAANPWGAPEVDQIYDAKNERIAARDPAQQVLQVLRDIGASQYGVQGDDVEQLCQAIARAVSGYEEPDMLRIVNLDRGPAATFLAEVWPKLEKKLGDERRRSGNAGAGVLLILASDQAPSRFKALCQEPGPVASFDKPFLLAAETLELPRSPGKGAANTESFRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW5</accession>
    <name>A0A2M9PBW5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_10855</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000635">
        <property type="protein sequence ID" value="PJN95043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="26948" checksum="B755EB88C1FB97F9" modified="2018-04-25" version="1">MEPPRIELRGLVKAFGDKRVLDGVDLTVRRGESLVIIGGSGTGKSVTLKCILGILTPDAGAVLIDGTPFAQVDRRAFLRNFGMLFQGGALFDSLPVWRNVAFRLLEARKPMRPRDAHALAVAKLARVGLGPEVADLYPAELSGGMQKRVGLARAIATDPDLIFFDEPTAGLDPIMAGVINDLIRELTTEMGATAVTITHDMTTVRTVADEVAMLHGGVVRWSGPVGEIETCGDPYVDQFIHGRAVGPIAAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY0</accession>
    <name>A0A2M9PBY0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000631">
        <property type="protein sequence ID" value="PJN95050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015430">
        <property type="term" value="F:ABC-type glycerol-3-phosphate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0001407">
        <property type="term" value="P:glycerophosphodiester transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017922">
        <property type="entry name" value="UgpC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43875:SF12">
        <property type="entry name" value="PTHR43875:SF12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="21"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9921" checksum="4EF125F1D9D283D7" modified="2018-04-25" version="1" fragment="single">MAHLSIRNLEKTYGGGFKAVHGINLEVQDGEFMVLVGPSGCAKSTTLRMIAGLETVSGGQISIGEKVVNNLAPGERGIAMVFQNYALYPHMKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC84</accession>
    <name>A0A2M9PC84_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Type III pantothenate kinase</fullName>
            <ecNumber evidence="6">2.7.1.33</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">PanK-III</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pantothenic acid kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">coaX</name>
        <name evidence="7" type="ORF">CNY89_10085</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>(R)-pantothenate + ATP = (R)-4'-phosphopantothenate + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:16373"/>
            <dbReference type="ChEBI" id="CHEBI:10986"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29032"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>NH4(+)</name>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
        </cofactor>
        <cofactor evidence="6">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="6">A monovalent cation. Ammonium or potassium.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 6">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 1/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the type III pantothenate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.33" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000574">
        <property type="protein sequence ID" value="PJN95167.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00352"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004594">
        <property type="term" value="F:pantothenate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01274">
        <property type="entry name" value="Pantothen_kinase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004619">
        <property type="entry name" value="Type_III_PanK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34265">
        <property type="entry name" value="PTHR34265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03309">
        <property type="entry name" value="Pan_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00671">
        <property type="entry name" value="baf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="4 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0630">Potassium</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="6">
        <location>
            <begin position="107"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="6"/>
            <end position="13"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>a monovalent cation</name>
            <dbReference type="ChEBI" id="CHEBI:60242"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005225"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95167.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="255" mass="27561" checksum="D0E63AF79F203BFA" modified="2018-04-25" version="1">MLLAIDVGNTNTVFALHDGTRTVAEWRCSTDRQRTADEYFVWLQQLMRNAGLDPLVRSVVVSSVVPQVVFNLRVLADRYFNTRPKVVGKPEVRIGVPIRVDPTAHVGADRLVNTVGAFDRYGGNLIVVDFGTATTFDVVDHDGAYVGGVIAPGVNLSLKALHDSAAALPFIDVTKPERVVGTNTVACMQSGVYWGYVGLVEGLCARIRAEREIPMKVIGTGGLSTLFAQGTDVLEVIDTDLTIHGLVLIDALNKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC86</accession>
    <name>A0A2M9PC86_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">PA-phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000582">
        <property type="protein sequence ID" value="PJN95149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036938">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxi_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000326">
        <property type="entry name" value="P_Acid_Pase_2/haloperoxidase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01569">
        <property type="entry name" value="PAP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00014">
        <property type="entry name" value="acidPPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48317">
        <property type="entry name" value="SSF48317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="180"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="domain" description="acidPPc" evidence="2">
        <location>
            <begin position="110"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="237" mass="25891" checksum="6F72FFD07FB780CE" modified="2018-04-25" version="1" fragment="single">MTERRGWRARLDRARPYLEQRSLLALLLIAGCAWIFVALADEVMEQESHAFDTAILLALRNPADTADPLGPGWLEEFGRDVTALGGVGVLAFITFAAVGLLWMQGKRGRAWLMLVAVLGGQALSSLFKYGFDRPRPDLVPHGALVYTASFPSGHSMMAAVTYLTLGALIAQSQRETALRIYIMALAVLVTIAVGISRLYLGVHWPTDVLAGWAAGAAWATFCLIAAQAIDRRRRARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA3</accession>
    <name>A0A2M9PCA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Nitric-oxide reductase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_10070</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000573">
        <property type="protein sequence ID" value="PJN95169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009060">
        <property type="term" value="P:aerobic respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="151"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="218"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="247"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="286"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="327"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="359"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="405"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="7">
        <location>
            <begin position="1"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="447" mass="49997" checksum="351E26A55A9E3400" modified="2018-04-25" version="1">MKYQSQKVALAYFAVAMALFAIQVLGGLLAGWIYVSPNTLSETLPFNVIRMIHTNALIVWLLLGFFGGTYYLLPEEAERELFSVKLAYAQLAILVLGTLAAVIGYLFGIHGGREFLEQPLWVKWGIFVAAVIFLVNVTLTSLGGRKTAITNILLLGLWLLSLLWVFAIINPDNLGLDKLYWWFVVHLWVEATWELVMAAILGYLMLKLTGVDREVIEKWLYVIVSCALFSGILGTGHHYLWIGTPGYWQWVGSIFSTFEVAPFFAMMSFAFIMVWKGRKNHPNKAALLWSLGCSVVAFFGAGVWGFLHTLHGVNYYTHGTQVTAAHGHLAFFGAYVMLNLAMITYAMPVLRGREPYNQVLNMVSFWLMTSGMAFMTFTLTFAGVVQTHLQRVMGMSYMEVQDQLGLFYLMRFGAGLTVVIGALLFIYSQVVVRREVVTPGPVAVPGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN7</accession>
    <name>A0A2M9PCN7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09210</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000505">
        <property type="protein sequence ID" value="PJN95316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="359" mass="38867" checksum="853BE8CA4DC9E844" modified="2018-04-25" version="1" fragment="single">QYDILTIGNYEVPIWGKQGWLVELDGLGDDYDVDDLLPAIRGGLTVDGKLYAAPFYGESAFLMYRTDLMEKAGLTMPENPTWEFIGEAARKMTDREAGINGICLRGKAGWGENMAFVGSLANSFGARWFDENWQPQFDSPEWKAALQYYVDIMKDAGPTGASSNGFNENLTLFQQGKCAIWADATSAGSFVSDPDQSTVADKVAYTIFPDAAGTGNHGNWLWSWNLAIPTSSKNPEAAETFIAWATDKAYTETVAAKDGWANVPPGTRTSLYENPKYLEAAAFADEAKAAMDAADITKPTVKPVPYTGGQFVAIPEFQSIGGTVGQIFAAVIAGQSSVDDALAQAQSATEREMRRAGYK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR0</accession>
    <name>A0A2M9PCR0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Acetate CoA-transferase YdiF</fullName>
            <ecNumber evidence="2">2.8.3.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09140</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>acetate + an acyl-CoA = a carboxylate + acetyl-CoA</text>
            <dbReference type="Rhea" id="RHEA:13381"/>
            <dbReference type="ChEBI" id="CHEBI:29067"/>
            <dbReference type="ChEBI" id="CHEBI:30089"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58342"/>
            <dbReference type="EC" id="2.8.3.8"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the 3-oxoacid CoA-transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.3.8" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000499">
        <property type="protein sequence ID" value="PJN95329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008775">
        <property type="term" value="F:acetate CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046952">
        <property type="term" value="P:ketone body catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014388">
        <property type="entry name" value="3-oxoacid_CoA-transferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000858">
        <property type="entry name" value="SCOT-t"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="5-glutamyl coenzyme A thioester intermediate" evidence="3">
        <location>
            <position position="340"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR000858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000858-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="535" mass="57236" checksum="8611954F3E4E1DD2" modified="2018-04-25" version="1">MTQPPSKPSGKPSGKIVTADEAAGRIPDGAVVTVSSSSALGCPDKVLAAIGARFDREGHPRDLTTIHPIAAGDMYGVKGVDHIAKDGLLSTIIGGSYPSGPSSLPMPAIWRMIVEEKLAAYNVPSGILFDMHRDVAARRPGVLTRVGFDTFADPVREGCAMNETAAARPIVRRVEFGGETWLHFPNITPQVCILRATTADERGNLTYEHEGAYLGGLDQAIAVRNHGGLVIAQVKRVTAAGSLRPHDVRVPGHLVDLVVIDPDQKQTTETPYDPAISGEIMRPWASFDIAEHNVEKIVARRAAMEVKAGQTANLGFGICSMVPRILLEEGQAQSVTWAIEQGAVGGMPLMGFAFGCASNADAFMPSPNQFTYFQGGGFDVSFLSFLEIDVEGNVNVSKLGKKPYLTAGCGGFVDITAHARKLVFAGFFEAGAEFELTEDALRVTKPGKFGKLVQQVEHVTFSGRRAREQGQEILYVTERCVIRLMPDGLTAVEVMPGIDPQRDIVDATGGRVRLANDLKVTPRSILSHGPMGMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX4</accession>
    <name>A0A2M9PCX4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000470">
        <property type="protein sequence ID" value="PJN95396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6142" checksum="BEAD69DCC352AA65" modified="2018-04-25" version="1" fragment="single">MPHVPDRPPVSDLTAHLGFWLRPASNPVSSALAGKLAGQGVTVADWTRSPASSRRPPAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD08</accession>
    <name>A0A2M9PD08_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glyoxylate/hydroxypyruvate reductase A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000456">
        <property type="protein sequence ID" value="PJN95427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3245" checksum="1C75679C6F074209" modified="2018-04-25" version="1" fragment="single">RAEDAAAHVIAGIRADLAGQAPPGLVDRGRGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD40</accession>
    <name>A0A2M9PD40_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 16">Phosphatidylcholine synthase</fullName>
            <shortName evidence="16">PC synthase</shortName>
            <shortName evidence="16">PCS</shortName>
            <ecNumber evidence="6 16">2.7.8.24</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15 16">CDP-diglyceride-choline O-phosphatidyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">CNY89_08500</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="16">Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 16">
            <text>a CDP-1,2-diacyl-sn-glycerol + choline = a 1,2-diacyl-sn-glycero-3-phosphocholine + CMP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:14597"/>
            <dbReference type="ChEBI" id="CHEBI:15354"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57643"/>
            <dbReference type="ChEBI" id="CHEBI:58332"/>
            <dbReference type="ChEBI" id="CHEBI:60377"/>
            <dbReference type="EC" id="2.7.8.24"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 16">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 16">Cell inner membrane</location>
            <topology evidence="4 16">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 16">Belongs to the CDP-alcohol phosphatidyltransferase class-I family.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.8.24" evidence="6 16"/>
    <dbReference type="EMBL" id="PHNO01000453">
        <property type="protein sequence ID" value="PJN95432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050520">
        <property type="term" value="F:phosphatidylcholine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043130">
        <property type="entry name" value="CDP-OH_PTrfase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026027">
        <property type="entry name" value="PcS"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000851">
        <property type="entry name" value="PcS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 16" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="16" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 16" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="13 16" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="16" id="KW-0464">Manganese</keyword>
    <keyword evidence="14 16 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="16" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0808">Transferase</keyword>
    <keyword evidence="11 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 17" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="70"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="179"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="208"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00015623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00033321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRNR" id="PIRNR000851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="PJN95432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="25681" checksum="91AF4D50B66C6F89" modified="2018-04-25" version="1">MKTKSLAFSVHLLTGSGAALALMALIAATRGDWRQMFGWLGVALIVDGIDGPLARKVDTKTHAPNWDGSTLDLVVDYLTYVFIPAYALIYSDLLPAPWGLIAALLITLTAVVYFSDVRMKATDNSFVGFPAVWQMPLLVFLVFSPPAWATFGIIVILAGVQFTPAKFIHPVRTVRLRGLNLAVTLLWVVLAGWAVWENFAPPEPVRIGLLAASLWLLLIGVVLQGFGALRRLAQAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD46</accession>
    <name>A0A2M9PD46_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000448">
        <property type="protein sequence ID" value="PJN95444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6982" checksum="8A94A631510352AB" modified="2018-04-25" version="1">MARDLAARTLGGKPAETGAEFTQFYAQPTGTPTRAALRTGRHPFRHGLQTAVIPSRGLYGLPTDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD47</accession>
    <name>A0A2M9PD47_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Fumarate hydratase class II</fullName>
            <shortName evidence="2">Fumarase C</shortName>
            <ecNumber evidence="2">4.2.1.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Aerobic fumarase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Iron-independent fumarase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">fumC</name>
        <name evidence="5" type="ORF">CNY89_08280</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>(S)-malate = fumarate + H2O</text>
            <dbReference type="Rhea" id="RHEA:12460"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15589"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="EC" id="4.2.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Carbohydrate metabolism; tricarboxylic acid cycle; (S)-malate from fumarate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="2">There are 2 substrate-binding sites: the catalytic A site, and the non-catalytic B site that may play a role in the transfer of substrate or product between the active site and the solvent. Alternatively, the B site may bind allosteric effectors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.2" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000436">
        <property type="protein sequence ID" value="PJN95475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01007"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045239">
        <property type="term" value="C:tricarboxylic acid cycle enzyme complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004333">
        <property type="term" value="F:fumarate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006106">
        <property type="term" value="P:fumarate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01362">
        <property type="entry name" value="Fumarase_classII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00743">
        <property type="entry name" value="FumaraseC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005677">
        <property type="entry name" value="Fum_hydII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018951">
        <property type="entry name" value="Fumarase_C_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11444">
        <property type="entry name" value="PTHR11444"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10415">
        <property type="entry name" value="FumaraseC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00979">
        <property type="entry name" value="fumC_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Lyase_1" evidence="3">
        <location>
            <begin position="13"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="domain" description="FumaraseC_C" evidence="4">
        <location>
            <begin position="408"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="98"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding (B site)" evidence="2">
        <location>
            <begin position="129"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="139"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="2">
        <location>
            <begin position="324"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="2">
        <location>
            <position position="188"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="318"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="187"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="319"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for catalytic activity" evidence="2">
        <location>
            <position position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF10415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="464" mass="49505" checksum="25B131B79E48E8DE" modified="2018-04-25" version="1">MTATRTETDSFGPLEVDASRYWGAQTQRSILNFPIGWERQPVAMRRALGIIKQAAAQVNMEFGDLDPTLGKAIVEAAAEVASGKWDDEFPLVVWQTGSGTQSNMNANEVISNRAIELLGGVKGSKKPVHPNDHVNMGQSSNDTYPTAMHIATAMIARDVTLPGLRKLHGALADKAEAFKDIIKIGRTHTQDATPLTLGQEFGGYAFQVEQGIKRVTAALHNIYPLAQGGTAVGTGLNTRKGFAEKIAAEIASITGLPFVTAPNKFEALAANDAMVEMSGALKTVATSLFKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPTQAEAMTMVCTQVLGNDATVGFAGSQGHFELNVFKPVIAQNVLQSLQLIGDASSAFTDNCVVGIEADEERISKLMWESLMLVTALAPTIGYDNATKVAKTAHKNRTTLKEEAINLGFVDEATFDRIVQPSDMVGPKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD48</accession>
    <name>A0A2M9PD48_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000438">
        <property type="protein sequence ID" value="PJN95469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9528" checksum="49FBE3B164F18551" modified="2018-04-25" version="1" fragment="single">MDNFEIGALVVLTAGSMRMAVESVEGDRVACVWCHEGKIGRDSFDARLLKKWEHREEERHSRPEGGARPFRGDREGGGKPYAPGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD68</accession>
    <name>A0A2M9PD68_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08325</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000439">
        <property type="protein sequence ID" value="PJN95468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="54"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="99"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="140"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="180"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="207"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="240"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="270"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="303"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="331"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="360"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="9"/>
            <end position="383"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="421" mass="44986" checksum="E2E0EFFBB61B7E0F" modified="2018-04-25" version="1" fragment="single">GNLTFQLNSVLTNDLLLAIPLFTFMGTILERSGLAEDLLEGFGQLFGGMRGGLSISVILVGAVLGAITGTVAASVISIGLISLPIMLRYGYNVRHATGVVAASGTIAQLIPPSLVLIVLADQLGVSVGEMYKGAIGASMVQVGLFIAWVLILTLVRPSYVPPLPPEARTLRGWALANRCIRGMVPSLALIFVVLGTILLGIATPTKAGALGVVGAMALAWANGRLTWAHTWHGMQTTMRLTAMVVFILMGARVFSLVFQGVGGKEWIEGWLVSLPGGVVGFLVFVNIFVFLIAFFLDFFEIAFIIVPLLVPAAEALGINIIWFGVLLGANIQTSFMHPPFGFALFYLRGIAPRSVRTKDIYWGAIPFLCLQLVLVGVLIAFPEVVTYFLDVEQAPISRRSSGRIAPRISPIPRIWAALTSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB6</accession>
    <name>A0A2M9PDB6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000420">
        <property type="protein sequence ID" value="PJN95514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7756" checksum="F95ABBF44D6BEF40" modified="2018-04-25" version="1" fragment="single">FNDFIVVEGSHNYKVHVFDKHNVKTPKLRQSYYDCEAIRHLPYLAAIPHLPNWEGRLLDAIRPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB7</accession>
    <name>A0A2M9PDB7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Isochorismatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000408">
        <property type="protein sequence ID" value="PJN95541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="17432" checksum="4BF286D5735C8D5C" modified="2018-04-25" version="1" fragment="single">RAAGMLVIHTREGHRPDLSDAPPAKIARGAPSKRIGDPGPMGRILIRGEAGHDIVTDLYPAPGEPVIDKPGKGAFHQTDLDQVLKNGGVDTLMVCGVTTEVCVHTTIREGNDRGYRCVAIGDACASYFPEFHRIGLEMIKAQGGIFGWVSDSAAFASALSGARAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE2</accession>
    <name>A0A2M9PDE2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucuronosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000411">
        <property type="protein sequence ID" value="PJN95534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016758">
        <property type="term" value="F:hexosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007235">
        <property type="entry name" value="Glyco_trans_28_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04101">
        <property type="entry name" value="Glyco_tran_28_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_tran_28_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04101"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17400" checksum="914410558B7CB618" modified="2018-04-25" version="1">MIFVTIGSMFPFDRLIRAMDAFAQAHPGTEILAQIGTGDYVPAHMPHVRKLDQADFAKTVAGADLVVAHAGMGSVITASQYGKPIVMIPRLREWGEHTTDHQLATANWLRDKPGVYIADADADLAPRIEEALGAGAPSAPIFPPDAPPEFIARLRACIFGQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF5</accession>
    <name>A0A2M9PDF5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">30S ribosomal protein S11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rpsK</name>
        <name evidence="4" type="ORF">CNY89_07785</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uS11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000401">
        <property type="protein sequence ID" value="PJN95553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001971">
        <property type="entry name" value="Ribosomal_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036967">
        <property type="entry name" value="Ribosomal_S11_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00411">
        <property type="entry name" value="Ribosomal_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="29" mass="3187" checksum="3D6B2BCA11C62752" modified="2018-04-25" version="1" fragment="single">GAVGFQITAIRDVTPIAHNGCRPPKRRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM2</accession>
    <name>A0A2M9PDM2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polyhydroxyalkanoate depolymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000376">
        <property type="protein sequence ID" value="PJN95614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009656">
        <property type="entry name" value="PHB_depo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010915">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06850">
        <property type="entry name" value="PHB_depo_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF020818">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01849">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB_depo_C" evidence="1">
        <location>
            <begin position="210"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="423" mass="47585" checksum="8638C18C2C263C15" modified="2018-04-25" version="1">MLYHAYEMTHAAISPMRAAAQFGQQVMRHPMNLMPGAYGSRAVSAALEMFINATRRYGKPLFELDHALVDGVQTPIVEEVVWTKPFCELLHFRRDSPAAAARKDPKVLIVAPMSGHYATLLRGTVQAMLPEHDVYITDWRDARDVPLSEGAFDLDDYTDYLMEMIRHLSLDGERISVLAVCQPGIPVLAAATLMAMDDDPRRPASMVLMGSPIDTARNPKQPNELANKQPLSWFENNVVTVVPWPNKGAMRRVYPGFLQLSSFLAMNVNRHVDAHVSQFRNLVRGDGDGTEAHRKFYDEYLAVMDLTGEFYLQTIERVFQKRLMAEGEYRYRGRLLEPAAITDIGLMTVEGEKDDITGLGQTEAAHDLAVNLPAEDRKHYVAIGVGHYGVFNGSRWRKLIQPEVRDFVRAQRREVTMAAIAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM6</accession>
    <name>A0A2M9PDM6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sulfate transporter subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_07285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the GMC oxidoreductase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the prokaryotic sulfate-binding protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000365">
        <property type="protein sequence ID" value="PJN95639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901681">
        <property type="term" value="F:sulfur compound binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902358">
        <property type="term" value="P:sulfate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01005">
        <property type="entry name" value="PBP2_CysP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034408">
        <property type="entry name" value="Sulphate/thiosulphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005669">
        <property type="entry name" value="Thiosulph/SO4-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30368">
        <property type="entry name" value="PTHR30368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00971">
        <property type="entry name" value="3a0106s03"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00623">
        <property type="entry name" value="GMC_OXRED_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00757">
        <property type="entry name" value="PROK_SULFATE_BIND_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0274">FAD</keyword>
    <keyword evidence="6" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="8">
        <location>
            <begin position="81"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS00623"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="47015" checksum="E1B37AC02C769D39" modified="2018-04-25" version="1">MTTGYDVHHRRRRLRRIGPRGPPLRGPSARVLLLEAGGTDRHPFYHLPAGFAKMTKGIGSWGWSTVPQRHMNGMTIRFTQARVIGGGSAINAQIYTRGNALDYDEWRQMGLAAAPAAEAQTLLNVSYDPTRELYREFNAAFNAHWTAQGHEALDLKTSHGGSGAQARAVIDGLDAQVVTLALGSDIDAIAARTDKIPEDWQGKLPHNSAPYTSTIVFLVREGNPKDLKDWDDLLRDDVAVITPNPKTSGGARWNYLAAWAYADKKFGSDEARIRAFVGQLFANVPVLDTGARGSTTTFAQRGIGDVLLAWENEAFLALDELGEDKFDIVLPSVSILAEPTVALVEGNLHDEEQTEAAKAYLDYLYSPEGQAIALKHFFRAWDTSAADPEDVARFPKLELATIADFGGWAKVQPEHFGEGGVFDQIYVGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS8</accession>
    <name>A0A2M9PDS8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Protein translocase subunit SecD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">secD</name>
        <name evidence="11" type="ORF">CNY89_07085</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000351">
        <property type="protein sequence ID" value="PJN95673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01463_B">
        <property type="entry name" value="SecD_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005791">
        <property type="entry name" value="SecD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022813">
        <property type="entry name" value="SecD/SecF_arch_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022645">
        <property type="entry name" value="SecD/SecF_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30081">
        <property type="entry name" value="PTHR30081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02355">
        <property type="entry name" value="SecD_SecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00916">
        <property type="entry name" value="2A0604s01"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01129">
        <property type="entry name" value="secD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="283"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="379"/>
            <end position="400"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="412"/>
            <end position="435"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="445" mass="46813" checksum="7782904006EDD141" modified="2018-04-25" version="1" fragment="single">GPSSSSTPTSSPSATRAPTTGSRPLRGSGGRIQEVSQPVFSLSGLATRDFTARAEGADTVVVTLSEAEITAMNERTMQRSLEIIRRRVDETGTREPTIQRQGADRILIQVPGLGSAEELLAIIGQTARLSFHAVVSRTTDANVRPGLDQIVAPSMDEAGVFYVLDRHAVVTGEQLVDSQPGFDQNNRPAVNFRFNPQGGAAFGTYTAQNIGKPFAILLDNEVISAPVIQSHIAGGSGIITGSFTPEESARLAILLRAGALPAGITVLEQRTIGPELGQDSIDAGGKAGLIAVGAVILYMVASYGGYGAAACLAMLINLSLIFALMTMIGATLTMPGIAGIVLTIGMAVDSNVLIFERVREEIRAGRGPARSLQTGFEKAFSSIVDANITTLIIAVILYFLGSGPVRGFAVTLGLGVLCTVFTAVYVTQLIIAVWFDRRRPKTITV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU6</accession>
    <name>A0A2M9PDU6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glucan biosynthesis protein G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06805</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="2">Glycan metabolism; osmoregulated periplasmic glucan (OPG) biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the OpgD/OpgG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000330">
        <property type="protein sequence ID" value="PJN95725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00637"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030246">
        <property type="term" value="F:carbohydrate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016051">
        <property type="term" value="P:carbohydrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011013">
        <property type="entry name" value="Gal_mutarotase_sf_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014718">
        <property type="entry name" value="GH-type_carb-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014438">
        <property type="entry name" value="Glucan_biosyn_MdoG/MdoD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007444">
        <property type="entry name" value="Glucan_biosyn_MdoG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30504">
        <property type="entry name" value="PTHR30504"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04349">
        <property type="entry name" value="MdoG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006281">
        <property type="entry name" value="MdoG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74650">
        <property type="entry name" value="SSF74650"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014806048" evidence="5">
        <location>
            <begin position="21"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="domain" description="MdoG" evidence="6">
        <location>
            <begin position="32"/>
            <end position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005001"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="507" mass="55636" checksum="82DD144E7DBE7D3A" modified="2018-04-25" version="1">MQRRAFLQTALAGLLGGALASMTRAQDAATPFSFQTVVDRARALSAQPFQRPAMTLTEPFADLSYDAFRAIRPREDMRLLSQAQGFQVDPLPPGQFQDRVEIALVADGLATPVAFSTRFFDFHPNYFPYPDGRAPEGLAADLGFSGFRVRHELNRPGVWDETLVFQGASYFRAVARDTLYGLSARGLAIGTGGPAEEFPLFTAFWIEQPASGAATLTVYALLDSASVAGAYAFRVTPGAETVMEIEARLFPRADLNAVGIAPLTSMYYFGPESRVGVDDFRDAVHDSGALRMINGLGERLIRPLRNPRKLEVSAFVDETPRSFGLIQRFRDFAHYQDAEARYELRPSAWVEPQGDWGRGAVILIEIPTGDEFADNIVAFWRPEAPLTAGSEHALAYRLVWGQSPGEDLPLATIFATRSGRSIHDPGERSFAVDFDLGRMDAADLTPRLTTTAGEVHGLSLVSLPGERNLGRAAFSLAPGEAAQAEFRLGLYDGDRQVSELWLYRWSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC5</accession>
    <name>A0A2M9PEC5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dihydrolipoyllysine-residue acetyltransferase</fullName>
            <ecNumber evidence="4">2.3.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05725</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA</text>
            <dbReference type="Rhea" id="RHEA:17017"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:10478"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="2.3.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.12" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000262">
        <property type="protein sequence ID" value="PJN95907.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:acetyl-CoA biosynthetic process from pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045257">
        <property type="entry name" value="E2/Pdx1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23151">
        <property type="entry name" value="PTHR23151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="7">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="81"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95907.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="11744" checksum="47B5E0B5DE1CBEF5" modified="2018-04-25" version="1" fragment="single">MATQILMPALSPTMEEGTLAKWLVKEGDPVSSGQILAEIETDKATMEFEAVDEGVIGKLLIPEGAEGVKVNTPIATLIGEEEDATEASAEAPTEAPAEAKPAETAEEPGQAPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH1</accession>
    <name>A0A2M9PEH1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Taurine catabolism dioxygenase TauD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000256">
        <property type="protein sequence ID" value="PJN95923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042098">
        <property type="entry name" value="TauD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003819">
        <property type="entry name" value="TauD/TfdA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02668">
        <property type="entry name" value="TauD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TauD" evidence="2">
        <location>
            <begin position="2"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02668"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="6020" checksum="928DF8DF952CE62A" modified="2018-04-25" version="1" fragment="single">AEEIEAIRAIAEDCTHEINWQDGDVAVLDNTRVMHGRRAIVDAQRQLFIGMGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ8</accession>
    <name>A0A2M9PEJ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rrf2 family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000243">
        <property type="protein sequence ID" value="PJN95965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030489">
        <property type="entry name" value="TR_Rrf2-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01332">
        <property type="entry name" value="HTH_RRF2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16735" checksum="82DBDE914EB4A687" modified="2018-04-25" version="1">MLSLKTKYAIKALMTLAEESAAGGATLRIEEIAERGGAPKRFLEHILIELRNAGYIGSRRGRIGGYFIIKEPRAIPIGAVLRLVDGPMAPLPCLSRRSYHKCEDCQDEETCRIRKVFGDLFSAYLLMVESLTLADLMAADPPQIGLDVATAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU3</accession>
    <name>A0A2M9PEU3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04785</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000209">
        <property type="protein sequence ID" value="PJN96059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="88"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="257"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="90"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="284"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="284" mass="30186" checksum="BD7ECE5CB81EC957" modified="2018-04-25" version="1" fragment="single">MKSESAVLPVATVVLVLLGLWYLLAIALNAGWAYDQAGRDGVELGPVALVRDTWSQERPRLPAPHQIAAELWKTTVEVRPSSRRSLIYHAWVTLAATLTGFGLGAALGVALAIAIVHDRTMEASVMPWVIASQTIPILAIAPMIVVVLNSMGVGGLAPKALISMYLSFFPVVVGMVKGLRSPDRMLIDQMRTWNATGGQTLWRLRWPYATPYLFASLRVAVAASLVGAIIGELPTGASAGLGARMLSGSYYGQTVQIWSALVMASALAAALVGVIGLAERATDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW7</accession>
    <name>A0A2M9PEW7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000203">
        <property type="protein sequence ID" value="PJN96081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="10736" checksum="93B66CE0E72E512F" modified="2018-04-25" version="1">MGSRNKDGGGVLAGDDPLTIAAYTTQDVGWFLQAALAVTHASEAREPLCCVAAAGLLLTAAEMILRGPISRVIGEANESALRQQAAATADLLNHLNGSKKGVRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF01</accession>
    <name>A0A2M9PF01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04495</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000194">
        <property type="protein sequence ID" value="PJN96106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013230">
        <property type="entry name" value="Peptidase_M15A_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08291">
        <property type="entry name" value="Peptidase_M15_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M15_3" evidence="2">
        <location>
            <begin position="39"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="143"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="149"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="19988" checksum="E33CF547338FAF9D" modified="2018-04-25" version="1" fragment="single">MTTTFHRHWRDVPDSVWRWPNFSPAEIACRGTGKLLINEPALDRLQALRDRLGKPLIVRSAYRSPEHNRAVGGATRSKHLDGAAFDIAMANHDPVAFEAAAREVGFLGFGFYPRSGFIHVDLGPARQWGERFPVRATAFAAETPPAREALADQPHDEGWRGGWRGDAGRSRGRGRAERPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF09</accession>
    <name>A0A2M9PF09_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">N-acetyl-gamma-glutamyl-phosphate reductase</fullName>
            <shortName evidence="1">AGPR</shortName>
            <ecNumber evidence="1">1.2.1.38</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">N-acetyl-glutamate semialdehyde dehydrogenase</fullName>
            <shortName evidence="1">NAGSA dehydrogenase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">argC</name>
        <name evidence="3" type="ORF">CNY89_04365</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>N-acetyl-L-glutamate 5-semialdehyde + NADP(+) + phosphate = H(+) + N-acetyl-L-glutamyl 5-phosphate + NADPH</text>
            <dbReference type="Rhea" id="RHEA:21588"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29123"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57936"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.2.1.38"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Amino-acid biosynthesis; L-arginine biosynthesis; N(2)-acetyl-L-ornithine from L-glutamate: step 3/4.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.38" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000187">
        <property type="protein sequence ID" value="PJN96135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00108"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003942">
        <property type="term" value="F:N-acetyl-gamma-glutamyl-phosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00150">
        <property type="entry name" value="ArgC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000706">
        <property type="entry name" value="AGPR_type-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01850">
        <property type="entry name" value="argC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="2">
        <location>
            <begin position="5"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="342" mass="36730" checksum="ED93746659DDEFCA" modified="2018-04-25" version="1">MQSFKIAILGASGYTGAELVRLIATHPGMEIVALTADRKAGQSMGSVFPHLRHLDLPKLTTIADVDFTGVDLAFCALPHATSQEVIAALPRTLKIVDLSADFRLRDPAVYAKWYGHEHQALDLQAEAVYGLTEFYRDQIKGARLVAGTGCNAATGMYGLLPLLKAGVIDADDILIDLATGVSGAGRAPKEGTLHAEVSEGYHAYNVAQHRHLAEFDQEFTLAAGRKVEVTFVPHLLPQNRGILATIYVRGDGPAIHKTLLEAYAEEPFLVVLPYGEAPATRHVRGSNYVHLGVIPDRRPGRVMVFSTLDNLAKGSSGQALQNANLMLGLPETLGLTAAPLFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF30</accession>
    <name>A0A2M9PF30_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000180">
        <property type="protein sequence ID" value="PJN96157.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="262"/>
            <end position="291"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96157.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="32238" checksum="29E6E59510EF9897" modified="2018-04-25" version="1">MALPIIGADERLAQRKGIKGVIFGRSGIGKTSLLWTLNASTTLFLDLEAGDLAVEGLEIDTLRPRTWKECRDFAVFIGGPNPALREDQPYSQAHFDEVCGRYGDPTVIGKYETVFIDSITVAGRLCFQWCRGQPEAFSEKTGKPDIRGAYGLHGREMIGWLTHLQHTRGKHVWFVGILDERLDDFNRKVFQPQIDGSKTGLELPGIVDQVITMADIPDPGGQPQRAFVCHTLNPWGYPAKDRSGRLDRVEAPHLGRLMEKIQRPAAPASERLTWPPVTPADPAPVQEPGHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF31</accession>
    <name>A0A2M9PF31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acriflavin resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04330</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000185">
        <property type="protein sequence ID" value="PJN96138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="76"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="152"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="197"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="227"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="260"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="65"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="289" mass="31079" checksum="F847B3978E46089E" modified="2018-04-25" version="1">MTVALPSPRPRNLAWIGVLPFLGFAALFLILPTVQLVAGAFRTPEGGFTLRNVAGLFQPSILAAFWISIRISVASAALGCLIGFAIAAAITLGGLPRWIRGPVSTFSGVASNFAGVPLAFAFLATLGRLGLVTILLREWFGVNIYALGFNLLSFWGLTLTYLFFQIPLMILIVTPALDGLKREWREAAEILGATGAQYWRMVALPILWPTLLGTFALLFANAFGAVATAYALTGSSLGIVPILLFAQIRGDVLQDPHLGYALAFGMIVLTGLANGVYIWLRARAERWVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB8</accession>
    <name>A0A2M9PFB8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000155">
        <property type="protein sequence ID" value="PJN96245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10851" checksum="35367C50C4556519" modified="2018-04-25" version="1">MTSVAQDIDVNLVAETFKLLGDPTRLRILLACLDGPRSVGEIAAAVGASQSLVSHHLRLLRGARLVKGTRDARQVFYQAADQHVRHMIQDVIEHSAEEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD8</accession>
    <name>A0A2M9PFD8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">2-dehydro-3-deoxyphosphooctonate aldolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000147">
        <property type="protein sequence ID" value="PJN96270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3680.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029024">
        <property type="entry name" value="TerB-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158682">
        <property type="entry name" value="SSF158682"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="15923" checksum="E850C51FA6D1EE9B" modified="2018-04-25" version="1">MPLNAPVAAFSSQDALVAVMVGVSASDANPTARELMSIQRMIDTLPVFVGYDRDRLQIVGRTVFDLFTEEDGLDALFGLVRDALPPSLRETAYALACDVAAADGRRLPGRAALPAGAASARPSRSSGSHRGGSTGAKQGPAKLREKINVWSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ3</accession>
    <name>A0A2M9PFJ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03435</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000139">
        <property type="protein sequence ID" value="PJN96292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014825461" evidence="6">
        <location>
            <begin position="23"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="344" mass="36391" checksum="0F0C8F4E6833E0A5" modified="2018-04-25" version="1">MSLALRALVAASALVLAQPTLAADVRWLTQTQPQNAQFPAEAAAIEAATAAGFTVSRNEFQVLGLNLADALRMASTGTFQIVTAQVGSAAKDDPFLEGIDLIGVATDMAELKTAVDAYREAFNARLGERFGVKALAIWPFGPQVFFCNQPVEGLDSLQGLKVRSFTASMSEMLEDVGATPVTLSFPEVYPALQRGVASCGVTSPTSANTGKWPEVTTHVYPLAVSGSVQAHIVNLEWFDSLPAEEQAELTKVMADMEARLWDLAAATNDTALACTTGGDCPEGGLYTAYDLTLVPVGEADKDRVTAIAVETILPEWAGRCAATYPDCAKVWNETIGAARGLTIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ6</accession>
    <name>A0A2M9PFJ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cation transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03710</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000155">
        <property type="protein sequence ID" value="PJN96244.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="110"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="176"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="208"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="324"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="330"/>
            <end position="381"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="394"/>
            <end position="410"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96244.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="410" mass="43036" checksum="24A05CBA27924155" modified="2018-04-25" version="1">MSSAAAHAHGHSHSHHGHDHGHDHGGHGHNHAPEVTPQNERVVLIGFLLTFGFMFAEIVGGVLSGSLALIADAGHMMTDAAALALAWAGFRFGRRAADSKRTFGYMRFEVLAGFVNALALILLVAWIAYEAVLRLLDPSPVLAGPMMIVAVLGLAVNCGVFYMLNKGDKDHVNIKGAMLHVVGDMLGSVAAIVAAGVIWMTGWTPVDPILSVLLSALVLRSGWGLLKNSMHILMEGAPSGLDPEAMRKGLVDSVPGLADVSHIHVWSITSGRSTATMHIALTDAADPAETVRLLKGRLAEEFEIGHSTVEIDWAGTEAACSMGTPLVAKGHGHDHGHDHGDHDHGDHDHAGHDHSGHDHGAHDHAAHDHAGHDHGDHAAHDPAQDPAPAAKPKVTAKAHDHGSGGCGHAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ7</accession>
    <name>A0A2M9PFQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">TetR/AcrR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_02920</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000114">
        <property type="protein sequence ID" value="PJN96375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041490">
        <property type="entry name" value="KstR2_TetR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17932">
        <property type="entry name" value="TetR_C_24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="5">
        <location>
            <begin position="10"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="4">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="21220" checksum="479CC7E2DA52FBB2" modified="2018-04-25" version="1">MARRTGSNGEKTAQDLRRAALRLFAAHGYAAVSMRQIAAAVGVQAGALYLYTPDKQALLADIMIGHMEDLLAAWEAFPKPDPATEAGMFEAFVRFHIRHHLTRAAEVFISYMELRSLEPANFARVEDLRRSYEAALTGILERGRREGAFRFGDARLATFAVIAMEGFVSPDDFYVFDAAGDLVAAPAAAESAYG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB5</accession>
    <name>A0A2M9PGB5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NADH-quinone oxidoreductase subunit G</fullName>
            <ecNumber evidence="3">1.6.5.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01675</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.5.11" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000061">
        <property type="protein sequence ID" value="PJN96580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015405">
        <property type="entry name" value="NuoG_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09326">
        <property type="entry name" value="NADH_dhqG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molybdopterin" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="NADH_dhqG_C" evidence="2">
        <location>
            <begin position="103"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15785" checksum="EB7BFA56D5B0D7DB" modified="2018-04-25" version="1" fragment="single">VYQGSHGDRGAHRADVILPGAAWTEETGIFVNTEGRPQIANRAGFPPGDARENWAILRALSATLGQALPFDSIHELRAKMFAGAAHLGRIDAVPENPWTPVPSGDISGADFGGAMQDHYQTNPILRASQVMAELSRLAAGRVQMMAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="22" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG6</accession>
    <name>A0A2M9PGG6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">Lon protease</fullName>
            <ecNumber evidence="7 8">3.4.21.53</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">ATP-dependent protease La</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lon</name>
        <name evidence="16" type="ORF">CNY89_01800</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8 11">
            <text>Hydrolysis of proteins in presence of ATP.</text>
            <dbReference type="EC" id="3.4.21.53"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7 8">Homohexamer. Organized in a ring with a central cavity.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="induction">
        <text evidence="7">By heat shock.</text>
    </comment>
    <comment type="similarity">
        <text evidence="7 8 11 12">Belongs to the peptidase S16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.53" evidence="7 8"/>
    <dbReference type="EMBL" id="PHNO01000065">
        <property type="protein sequence ID" value="PJN96564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0034605">
        <property type="term" value="P:cellular response to heat"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006515">
        <property type="term" value="P:protein quality control for misfolded or incompletely synthesized proteins"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.130.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01973">
        <property type="entry name" value="lon_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027543">
        <property type="entry name" value="Lon_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004815">
        <property type="entry name" value="Lon_bac/euk-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008269">
        <property type="entry name" value="Lon_proteolytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027065">
        <property type="entry name" value="Lon_Prtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003111">
        <property type="entry name" value="Lon_prtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046336">
        <property type="entry name" value="Lon_prtase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008268">
        <property type="entry name" value="Peptidase_S16_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10046">
        <property type="entry name" value="PTHR10046"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05362">
        <property type="entry name" value="Lon_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02190">
        <property type="entry name" value="LON_substr_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001174">
        <property type="entry name" value="Lon_proteas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00464">
        <property type="entry name" value="LON"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00763">
        <property type="entry name" value="lon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51787">
        <property type="entry name" value="LON_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51786">
        <property type="entry name" value="LON_PROTEOLYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01046">
        <property type="entry name" value="LON_SER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="evidence at transcript level"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7 8 11" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 7 8" id="KW-0645">Protease</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 8" id="KW-0720">Serine protease</keyword>
    <keyword evidence="6 7" id="KW-0346">Stress response</keyword>
    <feature type="domain" description="Lon N-terminal" evidence="15">
        <location>
            <begin position="9"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="domain" description="Lon proteolytic" evidence="14">
        <location>
            <begin position="589"/>
            <end position="770"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="774"/>
            <end position="813"/>
        </location>
    </feature>
    <feature type="active site" evidence="7 9 11">
        <location>
            <position position="676"/>
        </location>
    </feature>
    <feature type="active site" evidence="7 9 11">
        <location>
            <position position="719"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7 10">
        <location>
            <begin position="354"/>
            <end position="361"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR001174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001174-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS51786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51787"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN96564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="813" mass="89436" checksum="EC4772762D2798C7" modified="2018-04-25" version="1">MTDASSQSFPVLPLRDIVVFPHMIVPLFVGREKSVRALEAVMKDDKQILLSSQMDASEDEPTPETIYRTGVLANVLQLLKLPDGTVKVLVEGKARVRIEAFVENDAYFEAEAVLVAETEGDPAAVKALSRAVAEEFERYAKLNRNIPEEAVASISDNLAADKLADTVAGHLGVKLEEKQKLLEEADVGERLEQIYGLMQGEMSVLKVEKKIKSRVKTQMERTQREYYLNEQMKAIQRELGGDGEGADDASEFEERIAKTKFSKEARDKAIAELKKLRTMSPMSAEATVVRNYLDWMLSIPWGKKSRVRKDLAHAQGVLDADHYGLEKVKERIIEFLAVQSRSDKLKGPILCLVGPPGVGKTSLGKSVAKATGREFIRISLGGVRDEAEIRGHRRTYIGSMPGKIIQSMKKAKTNNPLILLDEIDKMGQDFRGDPASAMLEVLDPEQNATFMDHYLEVEYDLSNVMFITTANSYNMPRPLLDRMEIISLSGYTEDEKAEIARQHLVAKQEKGHGLKPGEFELTPAAMTDVIRYYTREAGVRNLEREIAKLCRKAVTEIVKGRTDKVVVTPENLEEFLGVRRFKFGLAEEADQVGVSTGLAWTEVGGDLLQIEALKLPGKGRMKTTGKLGDVMKESIDAASSYVRSKAPDLGLKPTLFEAVDIHVHVPEGATPKDGPSAGIAMVTAIVSVLTGVPVRRDVAMTGEVTLRGNVLPIGGLKEKLLAALRGGVKTVLIPSENVKDLREIPDNVKNGLELIPVSNVTDVLKVALTRTPEPIEWDEAARRRSSPEPEAATCAHPPKQTPEAGYGDPPPAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH4</accession>
    <name>A0A2M9PGH4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lactoylglutathione lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000050">
        <property type="protein sequence ID" value="PJN96626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="3"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14785" checksum="5FCAE8FC28738968" modified="2018-04-25" version="1">MAKVVHSMIRVLDEARSVDFYREAFGLEVADRIDFDSFTLIYLSNAEAEVELELTVNKGRTEPYDLGDGYGHLAVVVDDLDAEHARLEAAGRAPRKLVDFQNDGVRVARFFFVADPDGYQIEVIEKGGRFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL7</accession>
    <name>A0A2M9PGL7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="12812" checksum="B8C0344566515FB7" modified="2018-04-25" version="1">MRDLYSNIEAVQALAPAVQASATTGPAIDLHGANRVAIVVNTGAIASSGDFGVKLQESDTTTSEDFADVAAAQVQSDAPATLAAASAYRLGYLGFKRYIRVALTKAGGTSIAAGATAIRSDLAERP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM4</accession>
    <name>A0A2M9PGM4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc-finger domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019401">
        <property type="entry name" value="Znf_CHCC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10276">
        <property type="entry name" value="zf-CHCC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <keyword evidence="2" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="zf-CHCC" evidence="1">
        <location>
            <begin position="14"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6599" checksum="F36DEE50ED789934" modified="2018-04-25" version="1">MPIPAPEEIEVTKTRVACDGGGGALGHPRVWLQIDPEAGFVECGYCDRKYVLKAGAEASSDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV4</accession>
    <name>A0A2M9PGV4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00680</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000020">
        <property type="protein sequence ID" value="PJN96761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014624658" evidence="2">
        <location>
            <begin position="20"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="26"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="286" mass="31602" checksum="045AACAF25FCBCC9" modified="2018-04-25" version="1" fragment="single">MRRLALAMAASILPFAALAQEQEAPPNIIVIMGDDIGWSNIGVYNQGIMAGRTPNLDRMANEGMRFTDYYAEASCTAGRANFITGELPIRTGMTTVGQAGAAIGLPAEAVTIAQALNGMGYATGQFGKNHLGDLNEFLPTVHGFDEFFGYLYHLDAMEDPAHPNYPQDLLDVVGPRNMIHSWATETDDQTVQPRWGKVGKQRIEDAGTLYPERMETVDEEIRDKTLAFIDKARAEDKPFFVWLNPTRMHVITHLSDKYEGMRNSQNGWSIQEAGMAQLDDIVGSVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH21</accession>
    <name>A0A2M9PH21_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Translation initiation factor IF-2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013575">
        <property type="entry name" value="IF2_assoc_dom_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08364">
        <property type="entry name" value="IF2_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IF2_assoc" evidence="2">
        <location>
            <begin position="13"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="25"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08364"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11113" checksum="97F2A97AC24C764D" modified="2018-04-25" version="1" fragment="single">MTDTKDSDPGKGKPLGLRGAGTGTETHHVKQSFSHGRTKSVTVETKRKRVVVPKPGAAQATAAHPRGAIAQNLSEAEFERRLKAVEAAKSQEAERARKEREVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH25</accession>
    <name>A0A2M9PH25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7902" checksum="56C5E8C0CE608D7C" modified="2018-04-25" version="1">MRSDIEEVDVIFQTMTDRAVCVRGDEDGEDIWLPLSQVEIEDMEGRELRRGRPAILSGPEWLLTDKGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P444</accession>
    <name>A0A2M9P444_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004905">
        <property type="protein sequence ID" value="PJN92316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7212" checksum="CC7378DFE3A90BCC" modified="2018-04-25" version="1" fragment="single">PMKSRKSFTTWLKIGLSARKEVVRPWIAAASAAPRALGVHVPVKDASRRHVVDQLHGAEFDDPVPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P472</accession>
    <name>A0A2M9P472_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004903">
        <property type="protein sequence ID" value="PJN92318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6858" checksum="7DB1339C6F18A1B9" modified="2018-04-25" version="1" fragment="single">ARLLGGDETVFRNLPSGSLIPIRVARVLASGTMAARLLGGDETVFRNLPSGSLIPIRVARVLASGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P494</accession>
    <name>A0A2M9P494_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004809">
        <property type="protein sequence ID" value="PJN92345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7235" checksum="CB7A4F2FBE158D5D" modified="2018-04-25" version="1" fragment="single">MLRSAAMIVHARRSLNPRIVLRCATAPRLAAGVTISCNAFLQPGIVEHRIGIILFSFAFPSSSALSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H6</accession>
    <name>A0A2M9P4H6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DSBA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004577">
        <property type="protein sequence ID" value="PJN92425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA" evidence="1">
        <location>
            <begin position="30"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8228" checksum="BD17CD201956A53D" modified="2018-04-25" version="1" fragment="single">AEGVQTPVAMALFRRYWQEGADISDPAVLTEVAHRLLRWAEAEGVQTPVAMALFRRYWQEGADISDPAVLTEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J9</accession>
    <name>A0A2M9P4J9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004489">
        <property type="protein sequence ID" value="PJN92449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7821" checksum="1F505C3C0FE27F87" modified="2018-04-25" version="1" fragment="single">ALAALLVDGMIHPDVADDLRGVIAEALPRVSRDNPDMTALSIAALAALLVDGMIHPDVADDLRGVIAEALPRVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M1</accession>
    <name>A0A2M9P4M1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004429">
        <property type="protein sequence ID" value="PJN92469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8409" checksum="61E757E9DB5A7859" modified="2018-04-25" version="1" fragment="single">QSRTVVEVAQANPGLLTCQDLDLMWRLAAAFAQTGRADRASDAYRQSRTVVEVAQANPGLLTCQDLDLMWRLAAAFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M4</accession>
    <name>A0A2M9P4M4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_29330</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="5">Belongs to the Vsr family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004389">
        <property type="protein sequence ID" value="PJN92480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006298">
        <property type="term" value="P:mismatch repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004603">
        <property type="entry name" value="DNA_mismatch_endonuc_vsr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011335">
        <property type="entry name" value="Restrct_endonuc-II-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03852">
        <property type="entry name" value="Vsr"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52980">
        <property type="entry name" value="SSF52980"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="4" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="9204" checksum="ACCE6AC248FD8BF4" modified="2018-04-25" version="1" fragment="single">MVFPARRKAIFVHGCFWHGHDCRRGARTPRRYRFRLHRKGLPGTPDLVFPARRKAIFVHGCFWHGHDCRRGARTPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P6</accession>
    <name>A0A2M9P4P6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_29240</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004351">
        <property type="protein sequence ID" value="PJN92493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6540" checksum="C438510786F3B2A2" modified="2018-04-25" version="1" fragment="single">ADVVGIFPNEDSIVRLIGAVLLEQNDEWQLQHRYMQIEGMVELDASAEASPSLIAEADAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z1</accession>
    <name>A0A2M9P4Z1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004066">
        <property type="protein sequence ID" value="PJN92583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9831" checksum="FA9BCF523930E884" modified="2018-04-25" version="1" fragment="single">QIARLIAGQINRRQYFFVVDAAETMVGYCGWAQTSHAAAEDWLTIPNFARLPFGQIARLIAGQINRRQYFFVVDAAETMVGYCGWAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P534</accession>
    <name>A0A2M9P534_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003844">
        <property type="protein sequence ID" value="PJN92656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010707">
        <property type="entry name" value="DUF1285"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06938">
        <property type="entry name" value="DUF1285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7662" checksum="471DA39B1A739A22" modified="2018-04-25" version="1" fragment="single">LKREGDSYFLVTPVEKVGIRVDDAPFVAVDFTAEGAGSGQRLTFARRSGGRPWRGSSPRSSSARGTRTFW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P559</accession>
    <name>A0A2M9P559_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sterol carrier family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003766">
        <property type="protein sequence ID" value="PJN92686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3618" checksum="A6BCE57A6AA6FEA6" modified="2018-04-25" version="1" fragment="single">MSDIVNGAVKALAAKLGDERIDGSVKFVIEDEGAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T7</accession>
    <name>A0A2M9P5T7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003136">
        <property type="protein sequence ID" value="PJN92902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="13121" checksum="A909D60C2E081EDC" modified="2018-04-25" version="1" fragment="single">PPLAIRRLKDEVAGDLPAKTRRLHPRLMPTEQADAYEVARLKLANGGPGAALKMLHHLRTVSVHPTISAGEGNQQFIEASGRLSATFEILREIASRQERALVFIEHRQMQHRFIELA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y1</accession>
    <name>A0A2M9P5Y1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002976">
        <property type="protein sequence ID" value="PJN92964.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92964.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="12951" checksum="C9FA2B14822AC80D" modified="2018-04-25" version="1" fragment="single">AGRTYYIEVVGSGGNPLPDSVVSLYRNGNFITYDDQGGGGNDSRIVYTATQTGNFQVEVGGYADFYTGDYHLLVNEDDYKGTVDLETNGYNFNIYGNGTLGAVNTLGSQTATINYDGDADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F4</accession>
    <name>A0A2M9P6F4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002578">
        <property type="protein sequence ID" value="PJN93113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15177" checksum="E10DF09EB1453E03" modified="2018-04-25" version="1" fragment="single">GRGELRGISIASYGPFASLKRSNAKGEFGLIRHQEPHSFDGLNLREIFYQGLVENDSNRDARMTIHTDAEACAIGEALIRGTPERHTLIFVLLTEGVGMGICQGQRPLASALHAELGMLHVTYDKSDRLLTEEEIGDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K1</accession>
    <name>A0A2M9P6K1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002446">
        <property type="protein sequence ID" value="PJN93163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5566" checksum="F3C8D7F078C5BC30" modified="2018-04-25" version="1">MVSEEAALHIVEQGWTAVEAGRRYGVSARLVKMRVQVTGAKTRLARRRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M5</accession>
    <name>A0A2M9P6M5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002369">
        <property type="protein sequence ID" value="PJN93196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="31" mass="3295" checksum="CB90BAAA9EE1E490" modified="2018-04-25" version="1" fragment="single">MGRGVSWLILVAVLVSAANAVMRKAFDMSSN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U0</accession>
    <name>A0A2M9P6U0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002326">
        <property type="protein sequence ID" value="PJN93225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="11963" checksum="3F250F5A7CB0F231" modified="2018-04-25" version="1">MLRARGTAGVGIVFAASEEMPSHLGPNVVMPLLSHLASADEEMLFARDGIELAYRDGLSLARGGVSPRVVRTGKQSGTLFIPGREPLHLAGNDQLTIFERLVVAAAKGSPDVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V8</accession>
    <name>A0A2M9P6V8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21835</name>
        <name evidence="2" type="ORF">CNY89_21840</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002135">
        <property type="protein sequence ID" value="PJN93303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002134">
        <property type="protein sequence ID" value="PJN93304.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93304.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11955" checksum="75C745D5CD183C63" modified="2018-04-25" version="1">MFLGIAWRSLAVLVNNGADGAVFSIALMIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQLSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W0</accession>
    <name>A0A2M9P6W0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">L-rhamnose mutarotase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002154">
        <property type="protein sequence ID" value="PJN93296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016857">
        <property type="term" value="F:racemase and epimerase activity, acting on carbohydrates and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008000">
        <property type="entry name" value="Rham/fucose_mutarotase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05336">
        <property type="entry name" value="rhaM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="14031" checksum="CD84308DB7EB97A2" modified="2018-04-25" version="1">MRRMGMVIGIRPEHIAEYRRLHAAVWPEVLRRIAQSHIRNYTIFLREPENLLFGYWEYHGTDFEADAAEIAADPVTQDWWRLCGPCQDPLESRADNEWWAMMEEVFHTDLPGEETDGQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X2</accession>
    <name>A0A2M9P6X2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_22250</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002245">
        <property type="protein sequence ID" value="PJN93260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="54"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8551" checksum="34551B5DCC16ACB4" modified="2018-04-25" version="1">MWTMAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTNRRNGSAARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y1</accession>
    <name>A0A2M9P6Y1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_22145</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002218">
        <property type="protein sequence ID" value="PJN93270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015103">
        <property type="term" value="F:inorganic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004706">
        <property type="entry name" value="Arsenical-R_Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43057">
        <property type="entry name" value="PTHR43057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="69"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12851" checksum="52160C3E26A9966D" modified="2018-04-25" version="1" fragment="single">MRNRISAFINLPIASIDRLALKAKLQAIGAVEYANVNIPMAALIWLMIIPMLVRIDFASLGKVGAYWRGIGVTLFVNWAVKPFSMALLGWLFIGYLFRPWLPADQIDSYIAGLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P753</accession>
    <name>A0A2M9P753_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">CsbD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_21590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0337 (CsbD) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002072">
        <property type="protein sequence ID" value="PJN93338.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008462">
        <property type="entry name" value="CsbD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026042">
        <property type="entry name" value="YjbJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036629">
        <property type="entry name" value="YjbJ_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05532">
        <property type="entry name" value="CsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039008">
        <property type="entry name" value="YjbJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69047">
        <property type="entry name" value="SSF69047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CsbD" evidence="3">
        <location>
            <begin position="3"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="51"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009129"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93338.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7613" checksum="3EC20438718D058B" modified="2018-04-25" version="1" fragment="single">NWDQIEGKWKEFTGKAQQQWGKLTDDDLQQAKGDRRELSGKIQSAYGVTKEEADRQIDDWMGRQN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L1</accession>
    <name>A0A2M9P7L1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA-directed RNA polymerase</fullName>
            <ecNumber evidence="1">2.7.7.6</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_20450</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.6" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01001829">
        <property type="protein sequence ID" value="PJN93490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000428">
        <property type="term" value="C:DNA-directed RNA polymerase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032549">
        <property type="term" value="F:ribonucleoside binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015712">
        <property type="entry name" value="DNA-dir_RNA_pol_su2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007644">
        <property type="entry name" value="RNA_pol_bsu_protrusion"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037034">
        <property type="entry name" value="RNA_pol_Rpb2_2_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20856">
        <property type="entry name" value="PTHR20856"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04563">
        <property type="entry name" value="RNA_pol_Rpb2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 7" id="KW-0240">DNA-directed RNA polymerase</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="RNA_pol_Rpb2_1" evidence="6">
        <location>
            <begin position="8"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="189"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="189" mass="21675" checksum="295C8F5954894686" modified="2018-04-25" version="1" fragment="single">EVAQMPNLIEVQKSSYDLFLNSGDGPAPRDGEGLKGTFQSVFPIRDFNDTAVLEFVKYELEHPKYDVEECMQRDMTYAAPLKVTLRLIVFEVDEETGARSVKDIKEQDVYMGDMPLMTPHGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFTSRIIPYRGSWLDFEFDAKDIVYARIDRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R5</accession>
    <name>A0A2M9P7R5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19770</name>
        <name evidence="1" type="ORF">CNY89_26055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003310">
        <property type="protein sequence ID" value="PJN92838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001690">
        <property type="protein sequence ID" value="PJN93582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8796" checksum="60227A8E9BC4AAD9" modified="2018-04-25" version="1" fragment="single">MPEDPTAARPLSQEIRCGILSNAAGKVMFLHEGPISTPLWAELDTQAGEIAFVYDDGTSRALGLHLDRDMIGNLRCGEELL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S8</accession>
    <name>A0A2M9P7S8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19475</name>
        <name evidence="1" type="ORF">CNY89_19825</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001701">
        <property type="protein sequence ID" value="PJN93575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001627">
        <property type="protein sequence ID" value="PJN93627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7457" checksum="753B9C1BD2F57212" modified="2018-04-25" version="1" fragment="single">MNTKRRLVSNYVRTFIEKEGGSIRFRAVRDERGRLYWEVLGVYPDGTEEAVTSSNTGQYKVLRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P828</accession>
    <name>A0A2M9P828_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron-sulfur cluster assembly scaffold protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001566">
        <property type="protein sequence ID" value="PJN93678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06664">
        <property type="entry name" value="IscU_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002871">
        <property type="entry name" value="NIF_FeS_clus_asmbl_NifU_N"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15793" checksum="BBD58443D75F8A3D" modified="2018-04-25" version="1">MSGKDDLIKLYSQRILALAADIPHAERLPHPQVSAKKRSPLCGSTVTVDLVLRDGRVAEFGQEVRACALGQAAASVVGANVVGRTREEVARAREQLAAMLKTEGPVPEAPFDGLEVLLPAREYKNRHASILLALDATLAAFDEALEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P887</accession>
    <name>A0A2M9P887_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphatidylethanolamine--Kdo2-lipid A phosphoethanolamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_18715</name>
        <name evidence="3" type="ORF">CNY89_25025</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002999">
        <property type="protein sequence ID" value="PJN92955.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001497">
        <property type="protein sequence ID" value="PJN93739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012549">
        <property type="entry name" value="EptA-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08019">
        <property type="entry name" value="EptA_B_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="61"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="EptA_B_N" evidence="2">
        <location>
            <begin position="69"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92955.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12354" checksum="7A37D4D75F74DB21" modified="2018-04-25" version="1" fragment="single">MRQSRATPPSVPKPTAFARPWRPSVSPATLNIAVALFIMAADNRTFWRRAIVIFDESALSLMMFGGAVWALTLFLLTLFGFRWLQKPVAIFVLLLSGATSYFMDALGVMID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B9</accession>
    <name>A0A2M9P8B9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18590</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001482">
        <property type="protein sequence ID" value="PJN93760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011257">
        <property type="entry name" value="DNA_glycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48150">
        <property type="entry name" value="SSF48150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="7"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="243" mass="26282" checksum="394BB71931D6644E" modified="2018-04-25" version="1" fragment="single">YVKPFVKRQKNDRADAEAIAEAASRPTMRFVAVKSVETQGRAVAFRTHQCLIRQRTQLINALRGHLAEFGLVAPKGPANLKVLENALADEISELPSPVREMGAIYLEQIARLTEVVERLAAELEAASKTDAALRRLRTIPGIGPVTAGAVAAFAPDLDTFDSGRNFAAWLGLVPRQRSTGGKVKLGSVSKMGQTDIRRLLIVGAMSVIRWVVRKGGSPNRWLAALVARKPKMVAAVALANKMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C6</accession>
    <name>A0A2M9P8C6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001440">
        <property type="protein sequence ID" value="PJN93802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="256" mass="27431" checksum="AE54FA1780411745" modified="2018-04-25" version="1" fragment="single">LHHRADETLVLALTTKDTREVWAPLGAALPPTIRTITLDLGDGGRLSNALGIIDGLGMIEAMGQAVAVDPAKPGYGEFGRAVYDDRALEAAVACLPPSVRHKRAAMARSDELSSSPDPLRAHANVRLKRLASATIGGLVFDYDGTLVATAERYSSPRAEIIEQLVRLDAAGVRLGVATGRGNSAGKDLRTVLPPSMHPRVLMGYYNGGHLVPLDVDIAREPPADDPAILKTVEWLRFRDDLFVSTGYKVGPLQIMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E5</accession>
    <name>A0A2M9P8E5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001421">
        <property type="protein sequence ID" value="PJN93822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="10"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="181" mass="20168" checksum="A4CA64B0B8B6ADB6" modified="2018-04-25" version="1">MENASYGQFCPVSMAAEVIGGRWTVLILREMLCGSTRFNDLRRGVPRMSPSLLSKRLKELEQSGVVQTAPTPSGVLEYRLTAAGEALRPVVMAIGGWGQAWIESQVSLRNLDPSLLMWDMRRHLRPEPLPPRRCMIQFLYPELPQARQAWWLVVDGGAVDLCSQARRDSSLCAICVMGGPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F5</accession>
    <name>A0A2M9P8F5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001434">
        <property type="protein sequence ID" value="PJN93808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10076" checksum="CE80B65396ECB4FF" modified="2018-04-25" version="1">MTTRLNPITTPRHELRAEKARRNKEAALNAFIGKKAEIDEMLARLQALSDDHFNCAPDEAGWAMVGTLEHYASLLKRITDSAFGEGEHAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F7</accession>
    <name>A0A2M9P8F7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L34</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpmH</name>
        <name evidence="6" type="ORF">CNY89_18180</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL34 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001419">
        <property type="protein sequence ID" value="PJN93825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00391">
        <property type="entry name" value="Ribosomal_L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000271">
        <property type="entry name" value="Ribosomal_L34"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020939">
        <property type="entry name" value="Ribosomal_L34_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14503">
        <property type="entry name" value="PTHR14503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00468">
        <property type="entry name" value="Ribosomal_L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01030">
        <property type="entry name" value="rpmH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00784">
        <property type="entry name" value="RIBOSOMAL_L34"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="5239" checksum="8E27FD5E4C56306F" modified="2018-04-25" version="1">MSKRTFQPSNLVRARRHGFRARMATKAGRVILNRRRAMGRKKLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I5</accession>
    <name>A0A2M9P8I5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001399">
        <property type="protein sequence ID" value="PJN93852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="270" mass="30284" checksum="6E604A660930A63D" modified="2018-04-25" version="1" fragment="single">HALHPEQRDGLFAALARREIRFGRWLMMRLDALSPGAVLGQPGAQERHNLATGRDFVEIRMQGTAARGTERRQFRTMALDMANRYLPSVQVLKNRGATDFRALLPSAAGTLTPGRVKELAGMLDKDQRRLEVTDARRRELKLLVDEHLAGSATYDGSDEVRLAMTRILMHRYANRTQHLMPSLFETFDPDPKTPIKVNAGILDAARLHLHHAYKRPLHFGVDDLCDASNENAEIFLQFSGALVARMETRAIRNQSPALTASMQEGALVEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K0</accession>
    <name>A0A2M9P8K0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Potassium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17955</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001393">
        <property type="protein sequence ID" value="PJN93861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006812">
        <property type="term" value="P:cation transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="44"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="182"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="251"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="5">
        <location>
            <begin position="1"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="28565" checksum="8713655FA8E5C49C" modified="2018-04-25" version="1" fragment="single">PFGLGLFSDPAAILHAAELGVVMFLFIIGLEMEPSRLWSMRRAIFGLGLAQLLACMALLSCVGLALGFPPAQSFVAGTGFVLTSTAIVMQMLEERGEISRPPGQRIISILLLEDLAIVPILALVAFLAPGAAETTLAERLTGVAIGLGSILGLVLAGRYLLNPFFRLLAAARAREVMTAAALLVVLGSALAMQLGGLSTAMGAFLAGVLLSESSFRHQLEAEVEPFRGILLGLFFLAVGMSLDLATIRENLGLIAVSVLAFMTLKALGIYGIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P6</accession>
    <name>A0A2M9P8P6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17675</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001359">
        <property type="protein sequence ID" value="PJN93903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="6">
        <location>
            <begin position="11"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13386" checksum="00B3534A147410EE" modified="2018-04-25" version="1" fragment="single">GYRPAAGIVGVLAAFLMLFVLGFGMGWIFMVLGLMIRTPTAVMTLGFGILFPLVFASNTMVDPATMPGWLRAFVEVNPVSLMTTALRGLMDGTATWGAIGRALIAPVLLTLVLAPVTLAIYRRRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q3</accession>
    <name>A0A2M9P8Q3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Benzoate 1,2-dioxygenase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17630</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001351">
        <property type="protein sequence ID" value="PJN93911.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015879">
        <property type="entry name" value="Ring_hydroxy_dOase_asu_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001663">
        <property type="entry name" value="Rng_hydr_dOase-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756">
        <property type="entry name" value="PTHR43756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00848">
        <property type="entry name" value="Ring_hydroxyl_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00090">
        <property type="entry name" value="RNGDIOXGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="7" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="6">
        <location>
            <begin position="54"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93911.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="259" mass="29205" checksum="6E2683203B0D2FCF" modified="2018-04-25" version="1" fragment="single">MSAIIEKARDLDHMLATVVQDDAEAGLFRCRRDIFTNEDLFTLEMKHIFEGNWVYLAHESQIPDVNDYYTTWIGRQPVVITRDKTGTLNAVINACAHKGAMLCRRKQGNKGSFTCPFHGWTFSNNGKLLKVKDAKTTQYPDQFAKDGSHDLTRVARFESYRGFLFGSLNPDVAPLEEYLGETTIIIDQIVDQAPEGLEVLRGNSSYVYDGNWKLQMENGCDGYHVSSVHWNYATTMDRRSETGTKAVDANSWSKSVAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T2</accession>
    <name>A0A2M9P8T2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001328">
        <property type="protein sequence ID" value="PJN93934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007413">
        <property type="entry name" value="DUF463_YcjX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38605">
        <property type="entry name" value="PTHR38605"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04317">
        <property type="entry name" value="DUF463"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16949" checksum="FD8FB003F907A695" modified="2018-04-25" version="1">MESTIQGVNEALFDPVIRLGVTGLARAGKTVFITSLVANLLDRGRMPQLRAAAEGRIEAAYLQPSPDHSIPRFAFEDHLAALTAPEPHWPESTRSISTLRLSLRVAPSGMFAGFKGPTTVHLDITDYPGEWLLDLPLMSQSHRKRAPPSASCQAPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U9</accession>
    <name>A0A2M9P8U9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Ureidoglycolate lyase</fullName>
            <ecNumber evidence="5">4.3.2.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Ureidoglycolatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">allA</name>
        <name evidence="6" type="ORF">CNY89_17275</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>(S)-ureidoglycolate = glyoxylate + urea</text>
            <dbReference type="Rhea" id="RHEA:11304"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
            <dbReference type="ChEBI" id="CHEBI:57296"/>
            <dbReference type="EC" id="4.3.2.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Nitrogen metabolism; (S)-allantoin degradation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the ureidoglycolate lyase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.3" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01001302">
        <property type="protein sequence ID" value="PJN93966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00395"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004848">
        <property type="term" value="F:ureidoglycolate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050385">
        <property type="term" value="F:ureidoglycolate lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000256">
        <property type="term" value="P:allantoin catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006145">
        <property type="term" value="P:purine nucleobase catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00616">
        <property type="entry name" value="Ureidogly_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007247">
        <property type="entry name" value="Ureidogly_lyase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023525">
        <property type="entry name" value="Ureidogly_lyase_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024060">
        <property type="entry name" value="Ureidoglycolate_lyase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21221">
        <property type="entry name" value="PTHR21221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04115">
        <property type="entry name" value="Ureidogly_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017306">
        <property type="entry name" value="Ureidogly_hydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0456">Lyase</keyword>
    <keyword evidence="3 5" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00616"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17633" checksum="6E966B8A66F98D54" modified="2018-04-25" version="1">MTRYVPLETLTAAAIAPFGDLIEATGEPSFAFNRGMAGRFHDLARTEALEGGRIGVSIGRAQPYSLPLKLEMVERHPLGSQAFVPLGPDPFVVIVAPDDDGKPGQPRAFLTEPGQGVNYLRNVWHGVLTPIDRAAEFLIVDRIGTGNNLQEHFFDEPWTVGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V0</accession>
    <name>A0A2M9P8V0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage terminase small subunit P27 family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001304">
        <property type="protein sequence ID" value="PJN93962.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006448">
        <property type="entry name" value="Phage_term_ssu_P27"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05119">
        <property type="entry name" value="Terminase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01558">
        <property type="entry name" value="sm_term_P27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93962.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="174" mass="19186" checksum="7BE465F3C6A7E198" modified="2018-04-25" version="1">MSPRPKPTAIRRLEGNRGKRAWNHNEPVPPDAQPRCPGHLSAVAQKEWRRLASALHKMGVLTIVDRAALAAYCAAYGRWVEAEEKLKETPTLFKTPAGYVQQSPWLGIANKQLELMGRYMVELGITPASRSRVVAGPTAQPTITFTTTYEDDPREQLRAKIDAIAVRMAAGGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P922</accession>
    <name>A0A2M9P922_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17035</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001271">
        <property type="protein sequence ID" value="PJN94009.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="69"/>
            <end position="269"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94009.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="299" mass="33216" checksum="FD9477963ECFDEB5" modified="2018-04-25" version="1" fragment="single">DAVIIATPSQLHGPMVRKALERGIHVFCEKPFCLDWREAEELAALAESKGLVNQVGYHYRYVGAFQEMKRLVEAGAIGEVTHVLAEAYGPVVLKPKGSTWRTDRAAGGGCLYDYAAHPINLVNWCFGLPAQVTGTILNSIYSADTDDEVYSTFAYAGGLSVQLSVNWSDESYRKMSAKVSLTGTMGRITADRQEIQVYMRETVDALPEYHEGWNVKYTTELTEPVRFYLRGEEYSAQIDDFVAAVQGGPRKSLNDFASAAQTDRTISLMIDDAEREKTLAPETVRQAPARKRGWFGLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P941</accession>
    <name>A0A2M9P941_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L29</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpmC</name>
        <name evidence="6" type="ORF">CNY89_16905</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL29 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001254">
        <property type="protein sequence ID" value="PJN94032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.310">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00374">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001854">
        <property type="entry name" value="Ribosomal_L29/L35"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036049">
        <property type="entry name" value="Ribosomal_L29/L35_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00831">
        <property type="entry name" value="Ribosomal_L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46561">
        <property type="entry name" value="SSF46561"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00012">
        <property type="entry name" value="L29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7556" checksum="11046CA3ADBD1262" modified="2018-04-25" version="1">MKAADLRDKTPDQLRDQLSQLKKEAFNLRFQQATGQLESTARMQAVRRDAARVKTILNQKAAAAAAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P997</accession>
    <name>A0A2M9P997_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cyclohexadienyl dehydrogenase</fullName>
            <ecNumber evidence="3">1.3.1.12</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16515</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.12" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001203">
        <property type="protein sequence ID" value="PJN94103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008977">
        <property type="term" value="F:prephenate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004665">
        <property type="term" value="F:prephenate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006571">
        <property type="term" value="P:tyrosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003099">
        <property type="entry name" value="Prephen_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02153">
        <property type="entry name" value="PDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51176">
        <property type="entry name" value="PDH_ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014780172" evidence="1">
        <location>
            <begin position="22"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="domain" description="Prephenate/arogenate dehydrogenase" evidence="2">
        <location>
            <begin position="4"/>
            <end position="292"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="307" mass="32999" checksum="83945A1CB5B89725" modified="2018-04-25" version="1">MAYKHVALIGLGLIASSISHAMRRAGMETRITGYARSAPTRREASDLGIAEVFPTIAEAVKDADLVILCTPVGAMGAVAAEMAMHLARGATITDVGSVKGSVIEAVQPHLPHDVHFIPAHPIAGTEHSGPSAGFASLFDNRWCLLTPLPDAEPAEVERLSEFWRALGARVDVMEPDHHDLVLAVTSHVPHLIAFTVVGVADDLSRVTASEVINYSAAGFRDFTRIAASDPTMWRDVFLSNKEATLDILGRFTEELFALQRAIRLGDGSHLRDYFARTREIRRSIVEAGQDTSAADFGRGAPASAEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N6</accession>
    <name>A0A2M9P9N6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">UDP-galactopyranose mutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001089">
        <property type="protein sequence ID" value="PJN94256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="35711" checksum="1E2537E1BE1CAA74" modified="2018-04-25" version="1" fragment="single">MQRFAHTSRVFFVEEIIPTDHHLPYLEFHAFEGTSVTAVRPRVPHHADPARRETLLAGLLDQMTVLLGVRDPLLWFYTPMMWPAAAHLPASAIVYDCMDELSAFRFAAPDLVRNEALLMEAADVVFTGGHALYEAKRGLHDNVHAFPSSVDQRHFNRARDVRPEPQDHAGLPAPRLGFAGVIDERIDLALLAEAARARPDWSFVMIGPVVKIAETDLPQAPNIHWLGQKDYADLPDYMGGWDVALMPFALNEATRFISPTKTPEYLAAGCPVVSTPVRDVVREYGDLPGVRIARDAVGFVAACAETIAAGKGESGWRTTVDSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V0</accession>
    <name>A0A2M9P9V0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001050">
        <property type="protein sequence ID" value="PJN94317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7652" checksum="A515970988B47F95" modified="2018-04-25" version="1">MPVLCTDPSRLENLPDRRMLLRMGRAMVGLYCAAFAQVPRRITLDIDDWAGARFLETAPSATFPRNGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA09</accession>
    <name>A0A2M9PA09_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001020">
        <property type="protein sequence ID" value="PJN94373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="28302" checksum="9B2A3AE694D506AA" modified="2018-04-25" version="1" fragment="single">MLQAKMPPDSVPCPQSGPILVTGSHRSGSTWVGNVLSLAAGSGYVHEPFNVKTRRGICAARFPDDFTYVTRETEGPYVGPLGDTLRWRYAYAAEIPDLRTPRDVARMVRDGAYFKTRQLQGARLVMKDPIALFSAEWLSERFDMPVVTIIRHPAAFVASLIAAGWTRFHFSKLLVQERLMEERLAPYRAEIAAAAAELPDPVEVGILLWRLMHHHIRQLRRDHPEWIFVRHEDLTADPVASFRDVYGRLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA42</accession>
    <name>A0A2M9PA42_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000994">
        <property type="protein sequence ID" value="PJN94415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014806047" evidence="1">
        <location>
            <begin position="19"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8388" checksum="4994D7A11D678404" modified="2018-04-25" version="1">MRALVFAALLLSPGLALAQSPGMNSAPGQGMTFAQARAQMPGLSRVTFDKFDPDGDGVIPANKVLALQSTYNTMYLDRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA91</accession>
    <name>A0A2M9PA91_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Di-trans,poly-cis-decaprenylcistransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000963">
        <property type="protein sequence ID" value="PJN94458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7513" checksum="D2E407081D7C127B" modified="2018-04-25" version="1" fragment="single">ALARTALRPVPGGGLEFGGIVHVAGLGGFGSVYRDGTPAYYLTEPVVADDAKGVGPLMMASAENHRCSQLKAAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ0</accession>
    <name>A0A2M9PAJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ornithine decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000924">
        <property type="protein sequence ID" value="PJN94531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8671" checksum="2DBEA230F2721C7B" modified="2018-04-25" version="1" fragment="single">MEMTLLNATARLGAPTIYGDPHPEQSAVSARQDAYIRATEFDRPTMVFDLALLRGKYRALAAGLGRDVAVHYAVKANPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR0</accession>
    <name>A0A2M9PAR0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">50S ribosomal protein L16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_13480</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the universal ribosomal protein uL16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000875">
        <property type="protein sequence ID" value="PJN94611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01433">
        <property type="entry name" value="Ribosomal_L16_L10e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016180">
        <property type="entry name" value="Ribosomal_L10e/L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036920">
        <property type="entry name" value="Ribosomal_L10e/L16_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000114">
        <property type="entry name" value="Ribosomal_L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020798">
        <property type="entry name" value="Ribosomal_L16_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12220">
        <property type="entry name" value="PTHR12220"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00252">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00060">
        <property type="entry name" value="RIBOSOMALL16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54686">
        <property type="entry name" value="SSF54686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01164">
        <property type="entry name" value="rplP_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00586">
        <property type="entry name" value="RIBOSOMAL_L16_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00701">
        <property type="entry name" value="RIBOSOMAL_L16_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2 8" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L16" evidence="9">
        <location>
            <begin position="2"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13474" checksum="E8A5AE8A65206847" modified="2018-04-25" version="1" fragment="single">GEAKGGSDLNFGHFGLKATEPERITARQIEAARRALTRHMKRQGRVWIRIFPDVPVSKKPTEVRMGKGKGAVEFWAAKVKPGRIMFEIDGVDEDIAKEALRLAAMKLPIKCRFVTREDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW0</accession>
    <name>A0A2M9PAW0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RluA family pseudouridine synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000838">
        <property type="protein sequence ID" value="PJN94674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S4" evidence="1">
        <location>
            <begin position="16"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7837" checksum="5BA5164251F6F0B1" modified="2018-04-25" version="1" fragment="single">MSKVRQIVLGEDAADQRLDRWLRRLHPQVAQGRIEKMCRKGEIRLDGGRVQASTRLAPGQVLRLPPIPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY0</accession>
    <name>A0A2M9PAY0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Mannose-6-phosphate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000827">
        <property type="protein sequence ID" value="PJN94691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="362" mass="39829" checksum="2405BAEE81CD9F46" modified="2018-04-25" version="1" fragment="single">RPGDNPVRPIHATARMAHCFSIGALLGRPGAPEMVDHAMDFLWTRHRDARQGGYFWSVDDAGAVDDTKQGYGHAFVLLAAASAMTIGHPLAAPMLADVSEVLDARFWEADHGAIAEEFAADWTPVPGYRGQNSNMHLTEALMAAHEATGERLYLERAESIADLVIRRSAGAAGWRLPEHFTESWEVDRGYSGDEMFRPAGTTPGHSLEWARLLLQLWSLGGRKLDWAPDAARGLFAQAMALGWDPVQGGLFYTLGWDDRPRNRLKLWWPLCEGAGAAHFLNEHAPDPAHEAAYRRIWGTIDRAFLDRRHGGWQEECAEDLTPGFTLFPGKGDIYHALQACLIPLYPATGSLTRVIAEGAACA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB13</accession>
    <name>A0A2M9PB13_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">LptD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000810">
        <property type="protein sequence ID" value="PJN94721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061024">
        <property type="term" value="P:membrane organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010033">
        <property type="term" value="P:response to organic substance"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007543">
        <property type="entry name" value="LptD_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04453">
        <property type="entry name" value="LptD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LptD" evidence="1">
        <location>
            <begin position="9"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04453"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="30884" checksum="4D753656F965F575" modified="2018-04-25" version="1" fragment="single">RFTPLALAELRWPLVRRGARADQILEPVVQVIWSDSYGDQDLPNEDSELPEFSYANLFSTNRFPGRDRLEEGLRANIGVEYARYDPAGWNMGLTLGRVLRANELDQFPEGTGLDGRWSDYVGAVSLDFDWGLGLVNRMLVSDDFDFTRNELQVRYAGDGGSLAASYVYLAQDDTNPYLGPQDETSELGLNARYRVHPSVEIRGNWRYNVADGENLRAGGGITYGNDCVELDLSVSRRYTSSDNLPAATTIGFGLRLAGLGASGSDRRWPARSCAVAGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB43</accession>
    <name>A0A2M9PB43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">3-mercaptopyruvate sulfurtransferase</fullName>
            <ecNumber evidence="3">2.8.1.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">sseA</name>
        <name evidence="3" type="ORF">CNY89_12630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.2" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000793">
        <property type="protein sequence ID" value="PJN94749.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016784">
        <property type="term" value="F:3-mercaptopyruvate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004792">
        <property type="term" value="F:thiosulfate sulfurtransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.250.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001763">
        <property type="entry name" value="Rhodanese-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036873">
        <property type="entry name" value="Rhodanese-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001307">
        <property type="entry name" value="Thiosulphate_STrfase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045078">
        <property type="entry name" value="TST/MPST-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11364">
        <property type="entry name" value="PTHR11364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00581">
        <property type="entry name" value="Rhodanese"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00450">
        <property type="entry name" value="RHOD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52821">
        <property type="entry name" value="SSF52821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00380">
        <property type="entry name" value="RHODANESE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50206">
        <property type="entry name" value="RHODANESE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rhodanese" evidence="2">
        <location>
            <begin position="18"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94749.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="16882" checksum="702F89895F923AC1" modified="2018-04-25" version="1" fragment="single">MSDAQLLVSTDWLAAHLGAPDLRILDASWHMPDSGRDPRAEYLAGHIPGARFFDIDDISDSQSDLPHMAPPVEKFISRMRAMGVGDGHRVVVYDSTGVFSAPRVWWMFRLFGKTDVAVLDGGLRKWKAEGRPLEEGAPVLRDRHFTARRDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB56</accession>
    <name>A0A2M9PB56_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000782">
        <property type="protein sequence ID" value="PJN94770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008321">
        <property type="entry name" value="UCP032146"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06793">
        <property type="entry name" value="UPF0262"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12807" checksum="05299CFF9293DDB2" modified="2018-04-25" version="1" fragment="single">RPAPAGPYRLALGIRDRLLAFEVTTEAGEPAGAFLLSLTPFRQIFKDYFQICEAYFDAVRRLPPAQIEAIDMGRRGLHDEGSRILLERLDGKVETDMATARRLFTLLCALQIRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB58</accession>
    <name>A0A2M9PB58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cysteine synthase A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12465</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000779">
        <property type="protein sequence ID" value="PJN94776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001216">
        <property type="entry name" value="P-phosphate_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00901">
        <property type="entry name" value="CYS_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="9"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="345" mass="36340" checksum="9E89629C9F949246" modified="2018-04-25" version="1">MNIAADLAAAVGNTPLIRLRKASEITGCEILGKAEFMNPGQSVKDRAALWILRDALDRGLIGPGGVIVEGTAGNTGIGLTLIGQSLGLRSVIVIPETQAQEKKDALRLMGAELVEVPAVPYRDPNNYVRYSGRLAEALAASEPGGAFWANQFDNVANRQAHVDATAPEIWAQTGGRVDGFICAVGSGGTLAGVAEGLRAKKREIRIGLADPDGAALYNWYAHGEMKSEGSSITEGIGQGRITANLEGLDVDMPYNIPDAEALPIVFDLLAEEGLCMGASSGVNVAGAIRMARDLGPGHTIVTILCDYGTRYQSKLFNPAFLRDKGLPVPAWLEGPARSLPDVLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB79</accession>
    <name>A0A2M9PB79_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000775">
        <property type="protein sequence ID" value="PJN94782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="9"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="12093" checksum="84F5C08FBB5E4E98" modified="2018-04-25" version="1" fragment="single">MTTKISMLAIDLAKGSFQVCAVGPDGAVLYNRVLSRTRMAALLAEQPACMVAMEACATSHHWGRVAQGHGHEVRLVPAAYVKPFVKRQKNDRADAEAIAEAASRPTMRFVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH0</accession>
    <name>A0A2M9PBH0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Mannose-1-phosphate guanylyltransferase</fullName>
            <ecNumber evidence="3">2.7.7.13</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_11780</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>alpha-D-mannose 1-phosphate + GTP + H(+) = diphosphate + GDP-alpha-D-mannose</text>
            <dbReference type="Rhea" id="RHEA:15229"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
            <dbReference type="ChEBI" id="CHEBI:57527"/>
            <dbReference type="ChEBI" id="CHEBI:58409"/>
            <dbReference type="EC" id="2.7.7.13"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the mannose-6-phosphate isomerase type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.13" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000712">
        <property type="protein sequence ID" value="PJN94884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004475">
        <property type="term" value="F:mannose-1-phosphate guanylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000271">
        <property type="term" value="P:polysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006375">
        <property type="entry name" value="Man1P_GuaTrfase/Man6P_Isoase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001538">
        <property type="entry name" value="Man6P_isomerase-2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01050">
        <property type="entry name" value="MannoseP_isomer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01479">
        <property type="entry name" value="GMP_PMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="4 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="6">
        <location>
            <begin position="3"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="MannoseP_isomer" evidence="7">
        <location>
            <begin position="189"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006115"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="344" mass="37220" checksum="2D147648C05F3B86" modified="2018-04-25" version="1" fragment="single">EAAAAGKLVTFGVRPSRAETGYGYLELSTPLDGDATPEALPLVRFVEKPDAPTAEAMVAGGKHLWNSGVFLFSAAAIIEAFETHQPEMTAAVRAAVTGAAVDLAFLRLDPVAWDRVENLSIDYAVMEKADNLAVVPFLGEWSDLGSWDAIGREMGTDATGTALSGPAYAIDCEDSVLRAESPEQVLVGIGLKNIVAVAMRDAVLVADMSDGQRVKEAVALLKTKGGRQATDFPRFHRPWGWYETLSLGPRFQVKRIMVHPGGILSLQSHVHRAEHWVVVEGAARVTVGEDVRLLGENQSVYIPLGAIHRLENPGKVDLHLIEVQSGPYLGEDDIVRYEDIYART</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL1</accession>
    <name>A0A2M9PBL1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Guanine permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000691">
        <property type="protein sequence ID" value="PJN94927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904823">
        <property type="term" value="P:purine nucleobase transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045018">
        <property type="entry name" value="Azg-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43337">
        <property type="entry name" value="PTHR43337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="113"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="258"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="293"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="311" mass="31611" checksum="29BD64D15816F761" modified="2018-04-25" version="1" fragment="single">LVAGIPHSMRSAVAAGIGMFLGIIALKNAEIVVASPATFITLGDLTQAGPLLAVLGFFIIATLDALKVKGSILIGIVAVTIIAIALGITPFGGVISSPPSIAPTFLALDIPGAFAAGIVHVVLVFVLVEVFDATGTLIGVAKRAGLLTEGPGHSNPQLGKALLADSTAIVAGSFLGTSSTTAYVESASGVQAGGRTGLTALTVAALFLLALFFAPLAGSVPAFATAPALLFVATLMMRELIDIDWDDVTEAAPAALTAVMMPFTYSIANGLAFGFISYAVLKLLTGKAREVHAATWIVAGLFLIRFAFFSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL3</accession>
    <name>A0A2M9PBL3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF952 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000696">
        <property type="protein sequence ID" value="PJN94920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009297">
        <property type="entry name" value="DUF952"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34129">
        <property type="entry name" value="PTHR34129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06108">
        <property type="entry name" value="DUF952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7934" checksum="9162720CB053429F" modified="2018-04-25" version="1" fragment="single">MIYKLFRAPELAHLVAVGETPGSLADRADGFVHFSTAAQLPGTAARHFSGEDGLWLLACDEAALGPALVWEPSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN4</accession>
    <name>A0A2M9PBN4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hybrid-cluster NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000678">
        <property type="protein sequence ID" value="PJN94950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5411" checksum="C9DD2AC35447C271" modified="2018-04-25" version="1" fragment="single">GCTFGVCGTCKTKKLSGEVHMVHNGGISEDDIAAGYILACCSHPMGRVEIDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP0</accession>
    <name>A0A2M9PBP0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF4170 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000677">
        <property type="protein sequence ID" value="PJN94953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025226">
        <property type="entry name" value="DUF4170"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13773">
        <property type="entry name" value="DUF4170"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9238" checksum="EB27C190C7B0003C" modified="2018-04-25" version="1">MAQRLHFVFGGELVDPQHNEFRDCKDIEMVGVFPDYASAFKAWKGKAQATVDNAHMRYFIAHIHRLRDEEDRASSTEELG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP9</accession>
    <name>A0A2M9PBP9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Aminotransferase</fullName>
            <ecNumber evidence="4">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11215</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000666">
        <property type="protein sequence ID" value="PJN94976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000796">
        <property type="entry name" value="Asp_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11879">
        <property type="entry name" value="PTHR11879"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00799">
        <property type="entry name" value="TRANSAMINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="6">
        <location>
            <begin position="26"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="376"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="5">
        <location>
            <begin position="383"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="399"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="399" mass="43428" checksum="EB51333E29461880" modified="2018-04-25" version="1" fragment="single">MFETLQDQPADKIMELMGIYAADPRTDKLDLGVGVYKDASGKTPVMRAVKAAEKRLLETQASKSYVGLLGDLSFVEAMAELILGPDRPRDRLCGSQAPGGTGAIRQIFELIRRANPDATVWMSDPTWPNHPAIQKYVGLKGRSYRYFDPVTCEVDFEGMKADLAGMVPGDVLLLHGCCHNPTGANLTLDQWREITALVLDKGALPMIDIAYQGFGDGLEEDAAGLRLMLAAVPEMLVAASCSKNFGLYRDRVGAVFALSRTPAEAARTKANIANLNRLSFSFPPDHGAKVVEIILTDPELRADWMAELSAMRENMLTLRTGLTDALRRATNSDRFDFIRNHRGMFSLIGATPAQVAALRAEHGVYMIGDSRINVAGLPANASTSSPPPSPRRWPDTGPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC22</accession>
    <name>A0A2M9PC22_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000628">
        <property type="protein sequence ID" value="PJN95054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002823">
        <property type="entry name" value="DUF112_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01970">
        <property type="entry name" value="TctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="109"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="169"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="200"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="315"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="353"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="386"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="413"/>
            <end position="443"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="464"/>
            <end position="486"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="501"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="501" mass="52402" checksum="C0BE02F782606458" modified="2018-04-25" version="1" fragment="single">MDLIANLALGFETALTPINVFYCFLGALLGTLIGVLPGIGPTATIAMLLPITFTLQPVTALIMLAGIYYGAQYGGSTTAILINLPGESSSAVTAIDGYQMARKGKAGQALATAALGSFFAGSVATLILAVAAPPLAKAALSFGAPEYFSLIVLGLLASIALAHGSVLKAVAMILLGLLLGMVGQDIYTGTPRFTFGFFELYSGINFVSVAVGVFGVAEILRNLESSEAREVLVKRVTNLWLSREDFRRIAGPVLRGTGLGSLLGVLPGGGHVLASFASYSMEKRLSKTPGEFGKGAIEGVAGPESANNAAAQTSFIPLLTLGIPAHPVMALMIGAFIVQGITPGPNVINDEPALFWGIIASMWVGNLILVLLNLPLIGLWVKLLTVPYRALFPAIITFACLGCFAIQGNAFDVYSIAVFGLIGYVLIKLGCEPAPLLLGFVLGPLLEEHLRRAMIISRGDPTIFFTRPISATLLALAAAAVVVAVLPSVRLKREEVFVEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC93</accession>
    <name>A0A2M9PC93_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cold-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_10125</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000577">
        <property type="protein sequence ID" value="PJN95161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7242" checksum="47BA87A15E3CE6A8" modified="2018-04-25" version="1">MATGTVKWFNATKGFGFIQPDAGGKDVFLHISALERAGLREIADGTKVSFDLESGRDGRTSASRLAVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD5</accession>
    <name>A0A2M9PCD5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase_M10_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10065</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000572">
        <property type="protein sequence ID" value="PJN95172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd04277">
        <property type="entry name" value="ZnMc_serralysin_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034033">
        <property type="entry name" value="Serralysin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Peptidase_M10_C" evidence="2">
        <location>
            <begin position="224"/>
            <end position="337"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="370" mass="39192" checksum="D75782623801D6B7" modified="2018-04-25" version="1" fragment="single">MATTTGVTRSGNQLIDGQLSGVRWVGPLTYSDPGQASAYGAYFSDADADGVSAQDEGFSRLTAQQLSAVHSVLSADAGTPAARAGFSVEGLTNLDVRYLGGGSGAADLRLANSADPGTAYAYYPSSSPYGGDVWFGPAGDDPVVGTYDHHAVMHEIGHALGLKHGHETDVYGPLPRANDSHEYSIMTYRSYPGSPGSFYTNALYDGPQSFMMADIAALQYMYGADFRTNSGDTTYRWTPGAGTTFVDGQAAITPGGDRIFLTVWDGGGRDTYDLSAYSSDLAIDLAPGGYSTFSSGQRADLGGGYLARGNVYNALQYRGDARSLIENAVGGSGADLLHRRRDQLARRQAQPVDRDVAEIADVLDHRREQV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD9</accession>
    <name>A0A2M9PCD9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000555">
        <property type="protein sequence ID" value="PJN95210.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005094">
        <property type="entry name" value="Endonuclease_MobA/VirD2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03432">
        <property type="entry name" value="Relaxase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="183"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="342"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="374"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95210.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="374" mass="42177" checksum="9DC1578692605E5D" modified="2018-04-25" version="1" fragment="single">MNPVEIGTGKSFKGLAAYLLHDRGQAQTANRVAWAQSYNLDDADPERAWRLMAATAMSADRLKDAAGIKRGKKAVNTAWHFSLNFNPADRPTEAVQRAAVESALKALGLDGHQGLAVAHDDTDHRHVHVMVNLIDPETGLSAASKQPGGKPALLSNSQKKLSTWAKGFEREHGLTVTEGRLANEEKRQRGEKVDARREPRNVYERRRAEEQSPRLALVKQSFAVKAAQLAQEGRDLAAEHRQQWERARIDHIARQNTAWREQRHAQQQLVDRMKEAYKPRWRALFVRQRSEAEDFARGERTVIGRLWHGMAVYKERALHQDRLGGFLAAFSREERQAIVNRHGIGTPDRLPKGTPIGRGARPGPAQRCGWRRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL3</accession>
    <name>A0A2M9PCL3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000527">
        <property type="protein sequence ID" value="PJN95258.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95258.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="12495" checksum="3AF3F6102E84B0BC" modified="2018-04-25" version="1">MCFLLGYDARRAVEVTVVASLLTPLLGPLAVAWLSPHGAALDPLHLARDLGLILGGGLGFALGLRAGIGAGRINRAARSFDGVAVLALISVVLPLFDGLRAQMLADPCARRRCWRSPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL4</accession>
    <name>A0A2M9PCL4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Head protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000518">
        <property type="protein sequence ID" value="PJN95281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018774">
        <property type="entry name" value="Phage_Mu_GpT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10124">
        <property type="entry name" value="Mu-like_gpT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mu-like_gpT" evidence="1">
        <location>
            <begin position="9"/>
            <end position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="307" mass="33194" checksum="0B5CA996D8D531C6" modified="2018-04-25" version="1">MAIITPALLTALNTALRKEYSDAYAAARAESVFQRVATVVPSTSASNTYEWLGDFPELREWVGDRVARDMKAQGYQIANRLFEATVSVQRVAIEDDSHGVYGPLSARMGQSAAQHPDKLIATLMAAGAATLCYDGQNFFDVDHPVYPNVDGTGVAETVSNYNSGGGAPGPAWYLLDTRSPLRPFIFQERTKPEFEMKTNPGTSDRVFIADAYQYGVRYRCNAGLGFWQMAYCSRAALTAANFAAARLAMRKFAADGGRPLGINPNLIVVSADNEAAAKSLFEAQLVGGGDSNPNFKAVEVVVSPWLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS2</accession>
    <name>A0A2M9PCS2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000506">
        <property type="protein sequence ID" value="PJN95314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="17"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10053" checksum="050522060EC8234A" modified="2018-04-25" version="1">MECIERVQLASITAGQLRAARAMIRMDQCDLAERAGISGSTLKRYENCYGPLFGDPQKISALVAALEREGVVFLPDDGSGAGIRLLARTRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD18</accession>
    <name>A0A2M9PD18_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000451">
        <property type="protein sequence ID" value="PJN95439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014683377" evidence="1">
        <location>
            <begin position="20"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6695" checksum="8596B03FA62BED1E" modified="2018-04-25" version="1" fragment="single">MKLGRCLVLTLACATPVLADPTVGVASLDAGDRSRPVSLTLWYPAEGGIPEDVGGNAVFLGTPAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD31</accession>
    <name>A0A2M9PD31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Formate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000446">
        <property type="protein sequence ID" value="PJN95449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molybdopterin" evidence="1">
        <location>
            <begin position="2"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="356"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="356" mass="40496" checksum="345920E287741811" modified="2018-04-25" version="1" fragment="single">MTNSWTDIKNADLVVVMGGNAAEAHPCGFKWVTEAKAHRGARLIVVDPRFTRTAAVADYYAPIRPGTDIAWLMGMIRWCIENDKVQWEYVKNFTNASLLVKDAYGWNDGLFTGYDPEKRDYDRSSWDYQIGADGFALTDPTLTHPRCVWSLLKEHVSIYTPEMVERITGTPKDKFLHVAEMIGECSSPTKTMTSMYALGWTQHAKGAQNIRGMAMLQLILGNIGVRGGGMNALRGHSNIQGLTDVGLMSNLLPGYLNMPTEKEVDFATYMSTRNFKPLLPNQTSYWQNYRKFMVSYMKAMWGDHATAENDWAYHYLPKLDVPNYDILRMFELMNEGRVNLYFCQGFNPLLSFPNRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB1</accession>
    <name>A0A2M9PDB1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000422">
        <property type="protein sequence ID" value="PJN95508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10070" checksum="5CB000D7250C1509" modified="2018-04-25" version="1">MTKADAERPKDPSPEPGDANYAPPPRSQKQPGQDLDPAKPRAEPAPGEPEPGQDPGKDIRPAGPREMDIKPKGSSRTDEELDESFPASDPPGNY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI2</accession>
    <name>A0A2M9PDI2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosome hibernation promoting factor</fullName>
            <shortName evidence="2">HPF</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">raiA</name>
        <name evidence="2" type="synonym">hpf</name>
        <name evidence="5" type="ORF">CNY89_07525</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with 100S ribosomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPF/YfiA ribosome-associated protein family. Long HPF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000382">
        <property type="protein sequence ID" value="PJN95596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00552">
        <property type="entry name" value="RaiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.505.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00839">
        <property type="entry name" value="HPF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034694">
        <property type="entry name" value="HPF_long/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036567">
        <property type="entry name" value="RHF-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003489">
        <property type="entry name" value="RHF/RaiA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032528">
        <property type="entry name" value="Ribosom_S30AE_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038416">
        <property type="entry name" value="Ribosom_S30AE_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16321">
        <property type="entry name" value="Ribosom_S30AE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02482">
        <property type="entry name" value="Ribosomal_S30AE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69754">
        <property type="entry name" value="SSF69754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00741">
        <property type="entry name" value="yfiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0810">Translation regulation</keyword>
    <feature type="domain" description="Ribosom_S30AE_C" evidence="4">
        <location>
            <begin position="130"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="3">
        <location>
            <begin position="71"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="21157" checksum="3F0608C81F70131A" modified="2018-04-25" version="1">MQVSGKQIDIGEALRGHVETKIGDLVAKYADRPVEAVVIFSRDRHEFVAEGSLHLSTGLTAQAKGRADEIYACFEGAIERLEKQLRRYKRRLKDHHRNREFPIEAADASSYILASGEEHEEDSEPASLVPVIVAEMETRVAYLSVGEAVMQMELAGAGVQVFRNVSHGGVNVVYRREDGNIGWIDPRNVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL6</accession>
    <name>A0A2M9PDL6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">(R)-hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000363">
        <property type="protein sequence ID" value="PJN95645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="22"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15926" checksum="A4FACEC36FB27722" modified="2018-04-25" version="1">MEHHLPVGTICIEDLEIGMTRSLSKTVSDRMIELFAEISSDRNPVHLDDAYAQDTIFEGRIAHGMLTAGLISAVIGEQLPGHGTVYLSQTLKFMAPVRPGDRVTASVSVAAIDHSRRRVTLDCACRVGDRVVLKGEALVLAPSAKFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU3</accession>
    <name>A0A2M9PDU3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">ATP synthase subunit alpha</fullName>
            <ecNumber evidence="13">7.1.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">ATP synthase F1 sector subunit alpha</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">F-ATPase subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">atpA</name>
        <name evidence="17" type="ORF">CNY89_06945</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 13">Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="13">
            <text>ATP + 4 H(+)(in) + H2O = ADP + 5 H(+)(out) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:57720"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="7.1.2.2"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has four main subunits: a(1), b(1), b'(1) and c(9-12).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
            <topology evidence="13">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.2.2" evidence="13"/>
    <dbReference type="EMBL" id="PHNO01000341">
        <property type="protein sequence ID" value="PJN95699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046961">
        <property type="term" value="F:proton-transporting ATPase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd18113">
        <property type="entry name" value="ATP-synt_F1_alpha_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01132">
        <property type="entry name" value="F1_ATPase_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01346">
        <property type="entry name" value="ATP_synth_alpha_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023366">
        <property type="entry name" value="ATP_synth_asu-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000793">
        <property type="entry name" value="ATP_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038376">
        <property type="entry name" value="ATP_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033732">
        <property type="entry name" value="ATP_synth_F1_a"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005294">
        <property type="entry name" value="ATP_synth_F1_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036121">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00306">
        <property type="entry name" value="ATP-synt_ab_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039088">
        <property type="entry name" value="F_ATPase_subunit_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50615">
        <property type="entry name" value="SSF50615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00962">
        <property type="entry name" value="atpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11 13" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="6 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 13" id="KW-0139">CF(1)</keyword>
    <keyword evidence="5 13" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="8 13" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 13" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 13" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_ab_N" evidence="16">
        <location>
            <begin position="25"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab" evidence="14">
        <location>
            <begin position="149"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-synt_ab_C" evidence="15">
        <location>
            <begin position="381"/>
            <end position="505"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="169"/>
            <end position="176"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Required for activity" evidence="13">
        <location>
            <position position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00026013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02874"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN95699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="512" mass="55248" checksum="90E4A2DAC14DB6EC" modified="2018-04-25" version="1">MSIQAAEISAILKEQIRNFGQEAEVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIRGMALNLESDNVGVVIFGSDREIGEGDVVKRTQSIVDVPVGRALLGRVVDALGNPIDGKGPIDTSERRVADVKAPGIIPRRSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGKTAVALDAILNQKSYNDAAGSDESQKLYCVYVAVGQKRSTVAQLVRTLEQQGALEYSIVVAATASEPAPMQYLAPYAATAMAEYFRDNGAHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNPDFGSGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGVRPAVNVGLSVSRVGSSAQTKAMKSVAGSIKLELAQYREMAAFAQFGSDLDASTQRLLNRGARLTELLKQPQYAPLTNAEQVIVIYAGTQGYLDRLPVSEVGKFERQLLAHLRNQQSALLDEIRTNDQKIAGEIEKKIRAVLDGFAKTFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY8</accession>
    <name>A0A2M9PDY8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Dihydroxy-acid dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IlvD/Edd family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000317">
        <property type="protein sequence ID" value="PJN95759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016836">
        <property type="term" value="F:hydro-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020558">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037237">
        <property type="entry name" value="IlvD/EDD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143975">
        <property type="entry name" value="SSF143975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00886">
        <property type="entry name" value="ILVD_EDD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00887">
        <property type="entry name" value="ILVD_EDD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="495"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="495" mass="52166" checksum="F83208EB970A8952" modified="2018-04-25" version="1" fragment="single">MDAPKFDKRNLPSRHVTEGPERAPHRSYLYAMGLSEAEIHQPLVGVATCWNEAAPCNISLNRQAQAVKLGVKQALGTPREFCTITVTDGIAMGHEGMRSSLASRECIADSVELTMRGHCYDAIVGLAGCDKSLPGMMMAMVRLNVPSVFIYGGSILPGRLNGRDVVVQDVFEAVGKHQAGTMSDAELDIIERIACPSAGACGGQYTANTMACVSEAIGLALLNSSGAPAPYESRDQYSVASGLAVMNLLKKKIRARDVVTRKALENAARVVACTGGSTNAGLHLPAIAHEAGIDFTLQDVCDIFRDTPYFVNLKPGGQYVAKDLFEAGGVPVVLKELQKAGLIHEDCMTASGRTLGEELDQIRGEPDGKVIHPISAPLSRTGGVVGLIGNLAPEGAIVKVAGMSEAEQVFTGPARVFDCEEDAFEAVQNRGYKEGDVIVIRNEGPRGGPGMREMLATTAALSGQGMGKKVALITDGRFSGATRGFCVGHVGPEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE25</accession>
    <name>A0A2M9PE25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06465</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TrbG/VirB9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000306">
        <property type="protein sequence ID" value="PJN95786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06911">
        <property type="entry name" value="VirB9_CagX_TrbG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010258">
        <property type="entry name" value="Conjugal_tfr_TrbG/VirB9/CagX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033645">
        <property type="entry name" value="VirB9/CagX/TrbG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038161">
        <property type="entry name" value="VirB9/CagX/TrbG_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03524">
        <property type="entry name" value="CagX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014793120" evidence="3">
        <location>
            <begin position="25"/>
            <end position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="29808" checksum="933075F9B5871A7D" modified="2018-04-25" version="1">MRTPLLAAASLTALAILGAVPASAETAPRSVGADPRIKQYTYVKDTVYRLDVAMKIITSIEFAPGEAIDSVLMGDSESWQVIRLQSGNVLAVKPLIEGARTNMTVYTSQNTYTFELRAVPIPAGSSTLSYRIGFRYPERERAKVASRQVEQARPRDPNYYVAGGTTKFRPVAVYDDGRRTTFEFSRDAPRPAIFRVDEQGRESIINVRETEAGAVVMGTSDRWTLRIGDEELCVAHERVIKTVPGGRRAKALRSGYLVATSQPASAIPGLPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE55</accession>
    <name>A0A2M9PE55_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Peptide chain release factor 3</fullName>
            <shortName evidence="6">RF-3</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">prfC</name>
        <name evidence="8" type="ORF">CNY89_06395</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000302">
        <property type="protein sequence ID" value="PJN95798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016149">
        <property type="term" value="F:translation release factor activity, codon specific"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006449">
        <property type="term" value="P:regulation of translational termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04169">
        <property type="entry name" value="RF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.3280">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00072">
        <property type="entry name" value="Rel_fac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035647">
        <property type="entry name" value="EFG_III/V"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031157">
        <property type="entry name" value="G_TR_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004548">
        <property type="entry name" value="PrfC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032090">
        <property type="entry name" value="RF3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038467">
        <property type="entry name" value="RF3_dom_3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041732">
        <property type="entry name" value="RF3_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43556">
        <property type="entry name" value="PTHR43556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16658">
        <property type="entry name" value="RF3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54980">
        <property type="entry name" value="SSF54980"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00503">
        <property type="entry name" value="prfC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00301">
        <property type="entry name" value="G_TR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="7">
        <location>
            <begin position="16"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="25"/>
            <end position="32"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="93"/>
            <end position="97"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="147"/>
            <end position="150"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="535" mass="59717" checksum="8F0E5B5AFA90487B" modified="2018-04-25" version="1">MLDRIPNAPDLPPEIARRRTFAIISHPDAGKTTLTEKFLLYGGAIQMAGQVRAKGEARRTRSDFMKMEQDRGISVSASAMSFPFRDWWFNLVDTPGHSDFSEDTYRTLTAVDAAVMVIDGAKGVESQTRKLFEVCRLRDLPILTFCNKMDREARDTFEIIDEIQQELQLDVCPASWPIGQGREFLGCYDMLGDRLELMDRADRNKRAESLRMEGLDDPRMADHIPPDLLAKLREEVEMARELLPAFDAQAMAAGNLSPIWFGSAINSFGVQELMAGIGRFGPPPQVRAAESRGVGPWEEAVTGFVFKVQANMDPKHRDRVAFVRLCSGHFQRGMKMHHVRTGKPMAVSNPVLFLAQDRELAEDAFAGDIIGVPNHGQLRIGDALTEGEALRFTGIPSFAPELLQTVRSGDPMKSKHLEKALTQFAEEGASKLFKPTFGSGWIVGVVGPLQFDVLASRIELEYGLPVRFEPTQFTSARWVSGPKDKVEAFAKANKGHMAEDHDGDPVYMTRLQWDIDRVARDYPDIALTATKTMMV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE95</accession>
    <name>A0A2M9PE95_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05970</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000278">
        <property type="protein sequence ID" value="PJN95870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005890">
        <property type="entry name" value="NO3_transporter_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01184">
        <property type="entry name" value="ntrCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="4"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="287"/>
            <end position="520"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="323"/>
            <end position="330"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="548" mass="60036" checksum="642D7A46F5808B01" modified="2018-04-25" version="1">MAILELANVTKGYGAEPVLKGLTLSVEAGQFVAILGFSGTGKTTLMNLIAGLNTPDGGTVTFKGEPIAEPSPERALVFQSYALMPWLSVADNIGLAVDAVHGSKSRAERAAIVTRYIGMVGLAHARDRKPSELSGGMRQRVSVARALAMEPEMLLMDEPLSALDALTRANLADEIERIWEADRRTVVMITNDVDEALILADRVLVLNPDGTLGPDVKVTLPRPRDRMALNENPVFKAMRSQITQYLMDVGIAAKAPSVRQLPAVTPRHALPSAYARAAVAVTDERYLQFSQLYKTYATPKGPLTVVKDFNLTMKRGEFISVIGHSGCGKSTVLTMAAGLNDISAGAIVLDGRHVTGADPERAVVFQSPNLMPWLTARENVAIGADRVYPKATRAERQEVVEYYLEKVGLGDSMDRMAADMSNGMRQRVGIARAFALSPKLLLLDEPFGMLDSLTRWELQEVLMEVWSQTRVTAICVTHDVDEAILMSDRVVMMTNGPEATIGRIVEVDLPRPRTRKALVEHPDYYRYRAAVLEFLEEYEHGAHKKEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF0</accession>
    <name>A0A2M9PEF0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AlbA_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000264">
        <property type="protein sequence ID" value="PJN95903.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007421">
        <property type="entry name" value="Schlafen_AlbA_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038461">
        <property type="entry name" value="Schlafen_AlbA_2_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04326">
        <property type="entry name" value="AlbA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AlbA_2" evidence="1">
        <location>
            <begin position="86"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95903.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25344" checksum="6C6486B405967D2C" modified="2018-04-25" version="1" fragment="single">KIGKKPPADYVPPLDHAMSADERDRLYGWHALPPLWWELPYHEFLVQRRVRMADVIRQAWELLTVGSAPVPAAAPVAIADLIAGGETGAVEFKSTLRRNLHTGQIDDKIQVSALKTIAGFLNAKGGTLLIGVADDGEVLGLDADGFQNEDKLGLHLVNLVRDRIGEVFLPYIHPHFQDENGARVLAIRCEKGPKAAFLKDGNLQRFFVRGGNATTELSGASVTEYSKQRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH2</accession>
    <name>A0A2M9PEH2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable multidrug resistance protein NorM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_05645</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Multidrug efflux pump.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000258">
        <property type="protein sequence ID" value="PJN95918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="26"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="62"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="106"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="142"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="174"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="20825" checksum="1983EC18E10A906C" modified="2018-04-25" version="1" fragment="single">MMTIIGAAAERRGLTLRRMASLWRGLFALAWPVMLSRAGTLVMSLTAVVVVGRYDTLALGQLALGTGIFLPMAVAGIGMMTGLLSVVSRGAGAGETDLPDHGLRGLWWAGLIGAIGALPVFAGETILTLIGQTSDLAIGGGAVARWLAPGVFLHMLFVGASVYLEGTGRTKPGLVAMAVGTGVNLALCLMLVGGRLGAPEMGAPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL0</accession>
    <name>A0A2M9PEL0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA (cytosine-5-)-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_05305</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:13681"/>
            <dbReference type="Rhea" id="RHEA-COMP:11369"/>
            <dbReference type="Rhea" id="RHEA-COMP:11370"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:85452"/>
            <dbReference type="ChEBI" id="CHEBI:85454"/>
            <dbReference type="EC" id="2.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000240">
        <property type="protein sequence ID" value="PJN95976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018117">
        <property type="entry name" value="C5_DNA_meth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001525">
        <property type="entry name" value="C5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00145">
        <property type="entry name" value="DNA_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00105">
        <property type="entry name" value="C5METTRFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00094">
        <property type="entry name" value="C5_MTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51679">
        <property type="entry name" value="SAM_MT_C5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0680">Restriction system</keyword>
    <keyword evidence="5 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 7 9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="207"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="218"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="393" mass="42022" checksum="4179642E73AE2C43" modified="2018-04-25" version="1">MHDLALPSSGDASGAGDACLFGLSLCSGAGGLDLGLTIAIPGYRAVGHVERETYAAATLVARMEDASLDQAVVWDDVATFDGRPWRGAVDIVTAGYPCQPFSVAGKRRGADDPRHLWPHVARIIGEVAPPFVFLENVAHHLRLGFPEVASGLVGMGYRLAAGLFTAAEVGAPHKRERLFILAIREGDDLADPTRLLWHPVEWREPDGTAAAVADAPRQRQREPADEADAVADSGPARHEPRDDGRDVADATDRQLSQPRWREARREGPGPHGAGLADADGQRRLQAERGQPEDSGSDPCQPHVDDAHRAGSQGWGDDIGEHPGERSAWPPGPCDADGWERYLRAAPYLEPAVRRGADGLAHRVDRLRLCGNSVVPLVAAHALRTLAAELLADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL9</accession>
    <name>A0A2M9PEL9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000231">
        <property type="protein sequence ID" value="PJN95997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="151"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="486" mass="51944" checksum="BE7B884D87D2CC58" modified="2018-04-25" version="1">MAGDKISEAVRILAALVGVAEDPTLLSALKAGPGLRDSLKKIAASPPASFARLAEDLGRSGSAVFAALPEKPRDAEVLYLQMVEAGLPDPARIMADRMDAAAVTEGMLAGLTEREHRDPAMQALFRALTRPALERLLADKAFAADLTPAFMRAVLESLAETQRLLEEMRRNYGTLSAALEDRRHLSRTRLEAMALRFGEPEPEELSDADLETFLTGKAKDLRAAQARLGALCDQGGRIANLKAAAEAAMADLRLDEARDMIRAALSVQRSERTLRVLREDAGLVGVEAQIALLGNDADEAARLLECVARSFAPFDWQEAFDLRHNAVATLYKHGLRYGGSGLARAVELGRSNIVIAEESQSLICFGVAQTCLGLVLAAHGERFGGAEGAALLGEAVAAYRAALRVWTEAAHPVNWAQTTENLGLVNESLADNSTSADSKTALEAAAKCFIDALRVYDPETMPYDHGTATASLARVRAKLAALPDPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER8</accession>
    <name>A0A2M9PER8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04890</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000214">
        <property type="protein sequence ID" value="PJN96045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="239"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="29720" checksum="F6A5EE49379A8C49" modified="2018-04-25" version="1" fragment="single">MVEVRGLVTRFGTNVIHDGLDLDVYRGEVLGVVGGSGTGKSVLLREIVGLMRPAAGSITVFGTDMLNADDKARKAVENRWGVMFQDGALFSSLTVAENVEAPMRNLTSLTPELRRGLAEMKIALVGLPPNACDKYPADLSGGMKKRAGLARALALDPEIVFLDEPTAGLDPIGASDFDALIRSLQQALGITVFLVTHDLDTLHATTDRVAVLAEKKVLATGTMADMLKVEHPWVHEYFHGPRARASAARRERRHQRDFRLRRFAAVLHGHARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET9</accession>
    <name>A0A2M9PET9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000204">
        <property type="protein sequence ID" value="PJN96077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006944">
        <property type="entry name" value="Phage/GTA_portal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006427">
        <property type="entry name" value="Portal_HK97"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04860">
        <property type="entry name" value="Phage_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01537">
        <property type="entry name" value="portal_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="399" mass="43451" checksum="CF097AB904A7A52E" modified="2018-04-25" version="1">MSFLSRILGREQRASVRASDPYLAQFFGAGGGILGQVDTGRASGLAVAHRCIALIAESLASVPLCVYRNGERGERDRAQDHPLYAALHDAPNNNLTAFEFREALVASLLTHGNAYAKVTRNGRGQTVALHLVNPGAVSVERLVSNRMRYTITGSPPEVLVGEEMLHLRYRLRPDGFMGLSPIQMARETFAIALAQGDTAGKQAAKGFRPEGALVFPMALGLAAKEQSLDALRRKVEANDSASNILVLDAGAEWKPLAFSSKDAEFLESRKLTALDVCRVFGVPPSAAGITDNATYSNIGEESRALVQRCIAPMARRIEQAMNRTLLTPEARKTFFIEHDLAGLLRGDLGARYAAYRVGRDGGWLSPNEIRRFENMPEIEGGDEYLSPLNMQRIGEKVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW0</accession>
    <name>A0A2M9PEW0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Deacetylase sirtuin-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04740</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000206">
        <property type="protein sequence ID" value="PJN96073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1600.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003000">
        <property type="entry name" value="Sirtuin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026591">
        <property type="entry name" value="Sirtuin_cat_small_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026590">
        <property type="entry name" value="Ssirtuin_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02146">
        <property type="entry name" value="SIR2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50305">
        <property type="entry name" value="SIRTUIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0520">NAD</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Deacetylase sirtuin-type" evidence="3">
        <location>
            <begin position="1"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50305"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16526" checksum="AC940FDF51BDA293" modified="2018-04-25" version="1" fragment="single">MGGVFVLTGAGVSAESGLGTFRDAGGIWAKFDPMKLATPEAFARDPATVHAFYDARRRNLVAAVPNAAHFALAELARGAEVFLCTQNIDDLHEQAGSPQVHHMHGELLKALCGRCGATHPWRGDRPARAGGFAPGPPHARRTAQGALRALRGDPSLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW4</accession>
    <name>A0A2M9PEW4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">D-alanyl-D-alanine carboxypeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_04560</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the peptidase S11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000197">
        <property type="protein sequence ID" value="PJN96100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018044">
        <property type="entry name" value="Peptidase_S11"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001967">
        <property type="entry name" value="Peptidase_S11_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00768">
        <property type="entry name" value="Peptidase_S11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00725">
        <property type="entry name" value="DADACBPTASE1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0121">Carboxypeptidase</keyword>
    <keyword evidence="3" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="10" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="10" id="KW-0645">Protease</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Peptidase_S11" evidence="9">
        <location>
            <begin position="8"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="active site" description="Acyl-ester intermediate" evidence="6">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="6">
        <location>
            <position position="42"/>
        </location>
    </feature>
    <feature type="active site" evidence="6">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="202"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR618044-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="268" mass="28991" checksum="B6FB071F14C60F0D" modified="2018-04-25" version="1" fragment="single">MTFVAVAAQAQQYAAYVMDARNGKTIHAVNADTRLPPASLTKMMTLYIVFDQLKSGRMSLDQKVTISENAAAEPPSRLGLRPGQKIELRYLIRAAAIKSANDAATALGEAVAGSEPAFADRMNQYARAMGLRNTQFQNANGLTAPGHYSSARDMAEIGRRLFYDFPQYYNIFGRNSTSAGLATVQNTNRRLLDAYPGADGIKTGYTKAAGFNLVSSAERGQERVIVAVFGGKSSAARNAEVMRLMDKGFAEMPSRVRVAIARPAALRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY1</accession>
    <name>A0A2M9PEY1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000192">
        <property type="protein sequence ID" value="PJN96117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="20663" checksum="C084F45A82CF0F1F" modified="2018-04-25" version="1">MPQNLQTQAEGFALSADVYRVDAAGDRIDETGASGLDGVQARISYDLANANVRGAVEGLILLGTANLQARGNALDNTIAGNGGDNLIAGRAGNDLLIGGLGEDDFLFDTVGSAAGVDTITDFGRGDDRILLDDAVFTRLAAGALQSGALRTGQPLDGDDRIIYDAASGALTYDSDGNGKVQAIHFATLDAGLALTAADFFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF71</accession>
    <name>A0A2M9PF71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000179">
        <property type="protein sequence ID" value="PJN96162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8520" checksum="1E719158800B10C2" modified="2018-04-25" version="1">MDYQNGYKVCEFALSICDQVTVVSKAISHIDPRVRRVLDSVAEEKNSEERRMDYRRDMLLPNSAAEPDWNPPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC4</accession>
    <name>A0A2M9PFC4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000154">
        <property type="protein sequence ID" value="PJN96250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038725">
        <property type="entry name" value="YdaG_split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16242">
        <property type="entry name" value="Pyrid_ox_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyrid_ox_like" evidence="1">
        <location>
            <begin position="8"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="18002" checksum="330833868AFD5F3D" modified="2018-04-25" version="1">MPTNEEITAKFWKALKSDMTVMLGLVGKDQGHTRPMTAQMEGDEGGPIWFFTSTDAELSRAIQGAERAVLTFADKGHDIFACVHGDLRVGNDPEVIDRLWNRHVAAWYEGGKTDPKLVLLRFDPQEAEIWENASSLMAGLRVLVGSDPKEDYKDNVAKVVLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE6</accession>
    <name>A0A2M9PFE6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03550</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000146">
        <property type="protein sequence ID" value="PJN96273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="214"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="246"/>
            <end position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="30128" checksum="B91C1EDB83FE371C" modified="2018-04-25" version="1">MAVALGMGELQIPHMHVVLEIDEGLALGLRHRPDRRAAARGGLRLDRGEAGQLVDLKEAAKDLTAQNFPAIVESQTVDGRLVALPLFTDAPALYYRKDLLEKHGAAVPATWAELTETAARIQEAERAAGAADLWGFVWQGNAYEGLTCNALEWIKSFGGGQIVEADGTISINNEKAAAALDLAASWVIADEHVVAHGRDDDVLAFVVVGPQPDMLPPESVPGEQDPPGHPLRQSFERHEFAHLRPFPYAVRRGPGGGSPPQVRKSEIRGQAIASARVSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP1</accession>
    <name>A0A2M9PFP1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Peptide ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03005</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000118">
        <property type="protein sequence ID" value="PJN96361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014948675" evidence="2">
        <location>
            <begin position="23"/>
            <end position="501"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="3">
        <location>
            <begin position="72"/>
            <end position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="501" mass="54913" checksum="477A88DC3C4132E1" modified="2018-04-25" version="1">MARNKLLLTTALAALLAGPALAQGANDVTIVLGEELDLVEPCMATRSNIGRVILQNVNETLTQFDVKDGQGVMPRLAESWEQTADGAWRFHLRKGVKFSDGTDFDAADVKHSFERATSPQLTCETPRYFGDTRLEFTVVDDHTLDVKADPAQPILPLLMSLVTIVPSETPVEFTRTPVGTGPYALTAWNPGQNIVLERRADYWGEAPQVEKATYVFRTDPAVAAAMVTQGEADLAPSISAVDATNPETDIPYLNSETLYLRLDSAIAPISDIRVRQALNMAIDRDAFIGTLLPEGVVSAVAMVPPTTLGWNPDVKQYPFDPEKAKELLAAAKADGVPVDTTLYLIGRSNLFPGVVEVIEAMQQMLQEVGFTVEVQMVEVAQQEELYSKPFKDGRPPQMLAVQHDNSRGDPVFSMFFKYDSEGRQSGISDPKVDDLIARASAATGEERAALWSELFAYLHDEVVPDVLLFHMVSFARVGDRIEFQPTIATNSLLELSDITLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS3</accession>
    <name>A0A2M9PFS3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000110">
        <property type="protein sequence ID" value="PJN96391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="25903" checksum="E50098E9CDF4BE7D" modified="2018-04-25" version="1">MIFDHCDFSPISGRFTFPDVSSVVGWTVDPRCASDARRSDGWQREQNSTILDLSGTARTITAAVKATRHCDAIQSVRTLVDVQILDSRFTFPDQYCHMSILQTNASHFSAVPYSTGFEMRRCSILGAHSMMPGLIDFIDPIVHTCLYRRVSPLNWSSGNTTYPAPFTRQLDRSGLNPSSRVLMTNCVLPAGTSTTNDFLATKVTQTDVVFSNSAVPDGWAATDVALGKVGAYGYEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG38</accession>
    <name>A0A2M9PG38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Zn-dependent hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02080</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="3">Binds 2 Zn(2+) ions per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase M20 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000076">
        <property type="protein sequence ID" value="PJN96515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016813">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010158">
        <property type="entry name" value="Amidase_Cbmase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32494">
        <property type="entry name" value="PTHR32494"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001235">
        <property type="entry name" value="Amidase_carbamoylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01879">
        <property type="entry name" value="hydantase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="M20_dimer" evidence="4">
        <location>
            <begin position="215"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="87"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="133"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="194"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <position position="386"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
            <label>2</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR001235-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="416" mass="44563" checksum="06E6332FB74D25C6" modified="2018-04-25" version="1">MTLPGENQRIDGGRLWDSLMEMAKIGPGIAGGNNRQTLTDADAEGRALFQRWCEAAGMTMGVDAMGTMFATRPGEDPDALPVYMGSHLDTQPTGGKYDGVLGVLGALEAVRSMNDLRIRTKHPIVVVNWTNEEGARFAPAMLASGVFAGVHSLDYAYGRTDLDGKTFGAELERIGWKGPEEVGGRKMHAYFELHIEQGPILEAEGKEIGVVTHCQGLWWLEFTLTGKEAHTGSTPMELRVNAGLAMARIFEVVQAVAMSEQPNAVGGVGQVTFAPNSRNVLPGKVVFTVDIRTPEQAKLDRMRARIEAEAAAICESLGVGCAVEAVGHFDPVTFAPELVARVRGAAERLGYSHRDLVSGAGHDACWAARVAPATMVMCPCVDGLSHNEAEEITPDWAEKGANVLFHAVLETAGIVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG54</accession>
    <name>A0A2M9PG54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_02010</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the OmpP1/FadL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000073">
        <property type="protein sequence ID" value="PJN96530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005017">
        <property type="entry name" value="OMPP1/FadL/TodX"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35093">
        <property type="entry name" value="PTHR35093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03349">
        <property type="entry name" value="Toluene_X"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0998">Cell outer membrane</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0812">Transmembrane</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014657379" evidence="8">
        <location>
            <begin position="28"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="386" mass="41458" checksum="E50E5A12DC1E9AE9" modified="2018-04-25" version="1">MNRSFYCRCAALFSGVAALALPGAASAAALEHTVPSFVRIFFEDGTYGEIGLSYAAPDLDGKGANVPAALGGGRVDGNTGDLLKNYWAFSAALKGDFAFNDRLSWLLTFDQPYTAQTQYRQGSFPAGFSYAGTEADLDTYQLTAGLAYDATPNVKLYGGLRAQRMDATAALPILAGYRISADDDWGYGGYLGAAYHRPEIGLRVALTYASRISHALPTTESSTLFGSVNDTTDVDTPQSVTLEAQTGVAADTLVFGSIRWADWSEFAIAPEMYADITELVLGERRPLVDYPEDWWTYNLGVARQFTPDFAASFSVTYEPQVNEVLTTLGPVDGRTTLNLGASYEIGRTTVSAGLVYGWLGDATNLLDTKYRDGTVVGGGLRIGYAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG95</accession>
    <name>A0A2M9PG95_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000066">
        <property type="protein sequence ID" value="PJN96560.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="2">
        <location>
            <begin position="204"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96560.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="546" mass="59000" checksum="218C17F6A9053C84" modified="2018-04-25" version="1" fragment="single">ALASRGNTLGVAPTGAGKTIMLSAVTGEMIGDGAKACVLAHRDELTAQNRAKFQRVVPGVATSVIDATEKCWGGQVAFAMVPTLARASNLADMPRLDLLVVDEAHHAVADSYRRIIDRVREANPDARIFGVTATPNRGDRKGLREVFDNVADQVRLGELISSGHLVPPRTFVIDVGVQDELRSVRKTMSDFDMAEVAGIMDRAPVTDEVIRHWKEKAGDRQTVVFCSTVAHAEHVTDAFRAAGVSAALIHGDLAAETRKAILADYAAGDIRVIVNVAVLTEGWDHPPTSCVVLLRPSSYKSTMIQMVGRGLRTVDPEEHPGIVKTDCVVLDFGTSSLLHGTLEQDVDLDGKTETGEAPTKTCPACEAEIPLATTECPLCGEAFPREDLDAGEGGAAAPLSGFMMTEIDLLKRSSFAWVDLYGTDDALMATGFAAWGGIFWLDGVWYAIGGAKGERPHLLGVGERTVCLAQADDWLNAHETDESAFKTRSWLRQPPTEKQLQYLPPECRHDFGLTRYRASALMTFGFNKRAIRQLIDTAAGPERRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG99</accession>
    <name>A0A2M9PG99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000066">
        <property type="protein sequence ID" value="PJN96559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="528"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="528" mass="57224" checksum="C6564CB387A6D57D" modified="2018-04-25" version="1" fragment="single">MPLLPVVRALLEASRMSDDGILHFNPWMDFNDGPPSENPFGCDPDPEQIAVFLDTVFSWCEGLIPLRGFVDKGQGRDGKPHNIWIPADDTAPGKLATFAAWANREGAAVYVIPGTVEEQGQARAADVLQMQAIVVDLDAGDIPEKLDHVTRHLGTPTLIIESGGRTPEGAAKLHVWWKLTEPAEGDDLATLCRLRGEIAVKVGGDTHFRSAHQPIRVPGTVYHKHGHQRLVQIREHRDVEVDLADFAEKVAEMPPLPGVGFASDVAAPTTKPGIDAVLTTPVREGAVDDWSRFQGASAAIGHYVRLVHEGRLDPFAGWEAICGYNAAMLRPSWPLDRLQAESERLWALHVKRNGPPLLRAAHANAPASPLPTFSLGALLDDTTPMPEDIIGPRVLTPGGLLVLGGAPKVGKSDFLISWLVHMAAGVPFLGFTPPRPLRVFYLQAEIQYHYLRERMQQIALPATVIAAARDTFIATPKLKLLLDAEGVTRVAEAIRAAFADAPPDIIVIDPIRNLFDGGPEGGGENDNT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI4</accession>
    <name>A0A2M9PGI4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">NADH-quinone oxidoreductase subunit K</fullName>
            <ecNumber evidence="7">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">NADH dehydrogenase I subunit K</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">NDH-1 subunit K</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nuoK</name>
        <name evidence="8" type="ORF">CNY89_01695</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the complex I subunit 4L family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000061">
        <property type="protein sequence ID" value="PJN96584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01456">
        <property type="entry name" value="NDH1_NuoK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001133">
        <property type="entry name" value="NADH_UbQ_OxRdtase_chain4L/K"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039428">
        <property type="entry name" value="NUOK/Mnh_C1-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11434">
        <property type="entry name" value="PTHR11434"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00420">
        <property type="entry name" value="Oxidored_q2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0520">NAD</keyword>
    <keyword evidence="4 7" id="KW-0874">Quinone</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <keyword evidence="7" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="31"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10785" checksum="39F19350E2378FF7" modified="2018-04-25" version="1">MIGLGHYLTVAAILFVTGIFGIFINRKNVIVILMSIELMLLAVNINFVAFSAHLGDLVGQVFTLFVLTVAAAEAAIGLAILVCFFRNTGTIAVEDINVMKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY0</accession>
    <name>A0A2M9PGY0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Urea ABC transporter ATP-binding protein UrtD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">urtD</name>
        <name evidence="5" type="ORF">CNY89_00480</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000014">
        <property type="protein sequence ID" value="PJN96793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017781">
        <property type="entry name" value="ABC_transptr_urea_ATP-bd_UrtD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03411">
        <property type="entry name" value="urea_trans_UrtD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="38"/>
            <end position="45"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="246" mass="26807" checksum="4A02C6B30A6977CB" modified="2018-04-25" version="1">MQETQLYLQDVHRAFDGYKAINGLSIALAKGEMRAVVGPNGAGKTTMLDIITGKTRPDVGRVVWGEDTDLTKLDEASSARLGIGRKFQKPTVFETQTVETNVMLSLAGNRGVIATLMHKLSGAEAKRIDELLELVRLTEARSRLAGSLSHGQKQWLEIGMLLAQDPKLLLVDEPAAGMTDAETMRTAELLRSLAGKHTILVIEHDMDFVRALDCKVTVLHRGAVLAEGSLDHVSANPEVIEVYLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH41</accession>
    <name>A0A2M9PH41_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">PBSX family phage terminase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00045</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006437">
        <property type="entry name" value="Phage_terminase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035413">
        <property type="entry name" value="Terminase_L_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035412">
        <property type="entry name" value="Terminase_L_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04466">
        <property type="entry name" value="Terminase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17288">
        <property type="entry name" value="Terminase_3C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01547">
        <property type="entry name" value="phage_term_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Terminase_3" evidence="2">
        <location>
            <begin position="71"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="Terminase_3C" evidence="3">
        <location>
            <begin position="291"/>
            <end position="431"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="19"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="470" mass="53210" checksum="D1108BF634319F70" modified="2018-04-25" version="1">MRRPRDRDRRGDVRHRRRQPDRDRRRRLVSRQRRVHRPDPAARAPAGGHRSFVIEWFVPPVFRPLLKPARYKGAKGGRGSGKSHFFAGHGVIRMMEGKNLLCVREVQNTIADSVKRLLEGKISEFGWDHAFDVTEREIRCKETGAVCIFRGMQNHTAASVKSLEGFDIAWWEEAQTASQRSLDLLTPTIRTPGSELWFSWNPENESDPIEKLLVAEPPEGAIVVAANWSDNPRFPDELRADMERDLRRDPDKHAHVWEGAYRSASETRIFRNFRTGDVDVPDNAVWFYGVDFGYSVDPLAGVRFCFPDAGTIYISHEVYEVGVPQERVPVVLVEGLPGVTKWPVAADSARPDTIDFCRRHGVPRMGPAIKGPGSVEDGTTFLQGFDIIISPRCPSTLREFQRYAYKTDRKTGEILPVAEDAWNHAIDALRYGAERAHRKGKLVPGVVKAKREPADYGLGADEDTDSWRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P491</accession>
    <name>A0A2M9P491_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004747">
        <property type="protein sequence ID" value="PJN92371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7428" checksum="823B46AA5C226196" modified="2018-04-25" version="1" fragment="single">RTHAFVSLPVADAEGRLAGVVFQIHLIRGAIKVAEIFRTHAFVSLPVADAEGRLAGVVFQIHLIRGAIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D2</accession>
    <name>A0A2M9P4D2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004727">
        <property type="protein sequence ID" value="PJN92378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7512" checksum="2CED0139BECBCB7C" modified="2018-04-25" version="1" fragment="single">TGACWTATRICSPTSDSPGRTCSGRWRPCARAAVLAQYRRLLDGDPHLLADVGLARADVLRAMETLRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D8</accession>
    <name>A0A2M9P4D8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NAD_Gly3P_dh_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_30205</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004711">
        <property type="protein sequence ID" value="PJN92383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009331">
        <property type="term" value="C:glycerol-3-phosphate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004367">
        <property type="term" value="F:glycerol-3-phosphate dehydrogenase [NAD+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006072">
        <property type="term" value="P:glycerol-3-phosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008654">
        <property type="term" value="P:phospholipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006168">
        <property type="entry name" value="G3P_DH_NAD-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006109">
        <property type="entry name" value="G3P_DH_NAD-dep_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07479">
        <property type="entry name" value="NAD_Gly3P_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00077">
        <property type="entry name" value="GPDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="3" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0594">Phospholipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-1208">Phospholipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_Gly3P_dh_C" evidence="6">
        <location>
            <begin position="13"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF07479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="4964" checksum="F00253B88F406606" modified="2018-04-25" version="1" fragment="single">LATPRVRLYLTEDMIGAQLGGALKNVVAIACGMAEGTGWRRRVCGST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F1</accession>
    <name>A0A2M9P4F1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EAL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004558">
        <property type="protein sequence ID" value="PJN92431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6948" checksum="EBBCDB8E3D27BD1B" modified="2018-04-25" version="1" fragment="single">DFGTGYSALGYLSRFDFDVIKIDRAFIQGLDRPVQRRRRLRAISARAIRRWAICRASTST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G1</accession>
    <name>A0A2M9P4G1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004510">
        <property type="protein sequence ID" value="PJN92441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6574" checksum="7699318E26B29F90" modified="2018-04-25" version="1" fragment="single">GTALDPFGRTEERRMERGLIAEYEADIDRLQAALTPETRAVALARRSTRSGGPRSGGWSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J6</accession>
    <name>A0A2M9P4J6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004503">
        <property type="protein sequence ID" value="PJN92443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7678" checksum="76CB7F880F3A6AD0" modified="2018-04-25" version="1" fragment="single">GVLVRSTSNAFSESASTLSMVDQSAEVFSIDADSFGSGKPQIIEDLDFGAGDRLVLSGFGPDTFSGSGVTLAEDGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K0</accession>
    <name>A0A2M9P4K0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004388">
        <property type="protein sequence ID" value="PJN92481.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92481.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8354" checksum="BB3D9763122E3714" modified="2018-04-25" version="1" fragment="single">RGDAGIAGEFDRFLAAVETRFGAEGVRAFERGSINAAGRARAWAAMRGDAGIAGEFDRFLAAVETRFGAEGVRAFERGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L9</accession>
    <name>A0A2M9P4L9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004370">
        <property type="protein sequence ID" value="PJN92487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8511" checksum="556682BC7D671713" modified="2018-04-25" version="1" fragment="single">SDAHVYLTVPFVLSWSMLEAMSAGAPMVLSDTEPVREFADASEAWLVRRACLPDGALRAVLVDAGGDERRRADGALGHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M3</accession>
    <name>A0A2M9P4M3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004352">
        <property type="protein sequence ID" value="PJN92492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7671" checksum="186ADA5273EB9025" modified="2018-04-25" version="1" fragment="single">MSQDAQTSLAVLLLDIKDEIDAAKAERRHVLDALQRTRISELDRAFASLSKAEDFERDSRLHYRQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N7</accession>
    <name>A0A2M9P4N7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004383">
        <property type="protein sequence ID" value="PJN92485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8366" checksum="481D890FCA1217BF" modified="2018-04-25" version="1" fragment="single">ADFAAKGAESADRSSVADHLQRCSVERRRRGLHAALAANSVSLSTEADFAAKGAESADRSSVADHLQRCSVERRRRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S8</accession>
    <name>A0A2M9P4S8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004177">
        <property type="protein sequence ID" value="PJN92546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="18"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9167" checksum="51A7D0B05F644652" modified="2018-04-25" version="1" fragment="single">MGISHFSIVSSHPDTQVHVCDSSGIVLDVVGRYTSSPTWRDYDEMLEKAGLDAVIIATPSQLHGPMVRKALERGIHVFCEKPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T3</accession>
    <name>A0A2M9P4T3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004123">
        <property type="protein sequence ID" value="PJN92564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9573" checksum="B4066FBED3E77617" modified="2018-04-25" version="1" fragment="single">RMRSRLVNGRTRLINQLRAILLERGITVAKGRRALGLALATLVDDEGSGLSARMRALLEETRREWAELDARIAALDREFVETARS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V1</accession>
    <name>A0A2M9P4V1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RNA polymerase-binding protein DksA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004185">
        <property type="protein sequence ID" value="PJN92543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037187">
        <property type="entry name" value="DnaK_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109635">
        <property type="entry name" value="SSF109635"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="26" mass="3051" checksum="BAB5C88778359C63" modified="2018-04-25" version="1" fragment="single">MNPRQLDYFKRKLLAWKGSILAESKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4W1</accession>
    <name>A0A2M9P4W1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004157">
        <property type="protein sequence ID" value="PJN92553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3572" checksum="3B63AF271BA52791" modified="2018-04-25" version="1" fragment="single">MLDVDSDAPAAFDETDATALEAILMSVFAAAADRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P500</accession>
    <name>A0A2M9P500_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003921">
        <property type="protein sequence ID" value="PJN92631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9771" checksum="7647E09F3B3A7C6B" modified="2018-04-25" version="1" fragment="single">EAEIERVLKTFVAEDRGMIDEIAAVWDPDLPPDEGVREVFYSGVTAAGYALGALGHDEAEIERVLKTFVAEDRGMIDEIAAVWDPDLPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P541</accession>
    <name>A0A2M9P541_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_28035</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003927">
        <property type="protein sequence ID" value="PJN92628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10016" checksum="5F4CDC6D16FFEE62" modified="2018-04-25" version="1" fragment="single">RVKIRDKDSRIVKNKAVYLALGITGDGEREVLGLWIAESWRGHKTVRGTVLPDNGAKFWLSVMTELRNRGVQDILIAVVDGLKGFPEAIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P556</accession>
    <name>A0A2M9P556_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycine cleavage system protein T</fullName>
            <ecNumber evidence="2">2.1.2.10</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gcvT</name>
        <name evidence="2" type="ORF">CNY89_27645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.2.10" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003807">
        <property type="protein sequence ID" value="PJN92672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004047">
        <property type="term" value="F:aminomethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GCV_T_C" evidence="1">
        <location>
            <begin position="7"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7151" checksum="D0D9A1E9184A2215" modified="2018-04-25" version="1" fragment="single">VTLHAAPDGPAVGAITSGGFGPSLNAPVAMGYVEIAHAAPGTRLFGLLRGKMQPVMVARTPLIQPGYRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P592</accession>
    <name>A0A2M9P592_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">EamA/RhaT family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003706">
        <property type="protein sequence ID" value="PJN92707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="5712" checksum="413BD929330D0869" modified="2018-04-25" version="1" fragment="single">MLRPDPADFSPVVLLPLAAGALYGLSNLVTRELCAEEPVGVLVAGFFAALGLVSVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P595</accession>
    <name>A0A2M9P595_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003687">
        <property type="protein sequence ID" value="PJN92716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10732" checksum="F4D432D51BC3D5FD" modified="2018-04-25" version="1" fragment="single">VIGSNNSAHDICAALWEAGADVTMLQRSSTHIVKSDSLMEIGLGGLYSEQAVANGVTTRKADLIFASLPYKIMHEWQIPLYEQMKERDAAFYQALED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F9</accession>
    <name>A0A2M9P5F9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003560">
        <property type="protein sequence ID" value="PJN92760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9401" checksum="23D19138A98C488B" modified="2018-04-25" version="1" fragment="single">LAVALLLVIYFMIDGLARVVFALTIRPMDDWEWLLASGVAGVVLAMVVAAQLGTVAHWLLGTLVGAYLIVAGAALAWPAWKLWRNAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G9</accession>
    <name>A0A2M9P5G9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003528">
        <property type="protein sequence ID" value="PJN92770.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92770.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11113" checksum="AB227253F99615D6" modified="2018-04-25" version="1" fragment="single">ENVVIRGNTFESGDVRHGVFIFNELYRDGNSAAYHRNILVEDNYIRNANTHGITVTHGDGRDRAQQHGDLNPDQGVTQIPLVNVSGLSRNVEIIGNTVSSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K5</accession>
    <name>A0A2M9P5K5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">BstEII</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003386">
        <property type="protein sequence ID" value="PJN92817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="5131" checksum="DBB20672BE63F791" modified="2018-04-25" version="1" fragment="single">MARYDSDRGGAQEMIAPARYRDCANEVLSYAAKHDLPTKVIFLNDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L7</accession>
    <name>A0A2M9P5L7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003331">
        <property type="protein sequence ID" value="PJN92832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11465" checksum="9976E3FAF5EC72AB" modified="2018-04-25" version="1" fragment="single">MKRSRFTEEQIIGVLREHEAGAVVAELCRKHGLSSATFYAWKAKYGGMDVSEARRLKALEEENTKLKRLYADAMLDNAGLKELLAKKMVTPAARREAVATLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N8</accession>
    <name>A0A2M9P5N8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003247">
        <property type="protein sequence ID" value="PJN92856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01125">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6467" checksum="85999E0D2061B1C9" modified="2018-04-25" version="1" fragment="single">VDGAGAGAQVVFGVILGSGVGGGIVVRGQLIEGVNAIAGEWGHIPLPDPKDDERPGPMCSCWAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S6</accession>
    <name>A0A2M9P5S6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003148">
        <property type="protein sequence ID" value="PJN92896.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92896.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6172" checksum="DE3B22749092C6AF" modified="2018-04-25" version="1" fragment="single">MRHDPASAAIVIMLRSLKMYGMAQAVEDLVEQGSPAFGTATPILSQLLKAEVTEREV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z7</accession>
    <name>A0A2M9P5Z7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003018">
        <property type="protein sequence ID" value="PJN92949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="12590" checksum="BD96B17D368EC7BB" modified="2018-04-25" version="1" fragment="single">GGPAQAEALGQDDRRQLGEGHAGAFTIPSGVQKRPSRLVARMRALLAALWAGSAYPALLAQMHGVVDQRQRVETGVVVGGSGPRAASGEVRRRPRLSGRTIGDSSARVMRGPSRSRPGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N5</accession>
    <name>A0A2M9P6N5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF6471 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002352">
        <property type="protein sequence ID" value="PJN93206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045526">
        <property type="entry name" value="DUF6471"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20075">
        <property type="entry name" value="DUF6471"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6471" evidence="1">
        <location>
            <begin position="35"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF20075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8513" checksum="CF06254573AFAFB9" modified="2018-04-25" version="1" fragment="single">RRGELRRAIRAELRKGGVETSRHYLCAACRKAGRQLEIFENERNLNNKISRGGFSAAFFLQCLRSIGVNDLRFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T9</accession>
    <name>A0A2M9P6T9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002299">
        <property type="protein sequence ID" value="PJN93239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14154" checksum="96F3635FDA488857" modified="2018-04-25" version="1" fragment="single">HPEWIFVRHEDLTADPVASFRDVYGRLGLAFAPDTPERIANLSEQSGGLAAFSLFGSRRRVNRNSKDVAKLFRKRLSEEDIRRISDRAATSGRISTPKPSGSAAPRQKTGFLKICIFRRVESCLPPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P787</accession>
    <name>A0A2M9P787_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21090</name>
        <name evidence="1" type="ORF">CNY89_26345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003406">
        <property type="protein sequence ID" value="PJN92811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001967">
        <property type="protein sequence ID" value="PJN93397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8121" checksum="0D931BBE0A896B6E" modified="2018-04-25" version="1" fragment="single">MAAELEVLAEKDDPAIALEAERFLGLLRTAPQQWAGVLSKAALATKRYAPGSPLGVHTARNGFVASDLKAKRVTVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J1</accession>
    <name>A0A2M9P7J1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Site-specific DNA-methyltransferase (adenine-specific)</fullName>
            <ecNumber evidence="2">2.1.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20165</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.72" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001774">
        <property type="protein sequence ID" value="PJN93526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003356">
        <property type="entry name" value="DNA_methylase_A-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02384">
        <property type="entry name" value="N6_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_Mtase" evidence="3">
        <location>
            <begin position="25"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="21571" checksum="13EE62959FB1F149" modified="2018-04-25" version="1" fragment="single">LRFTPILRQPSLPAFCPITAAVDAMAEAGIEERGAIFTRREVVDFILDLAGYTADQDLTRQRLLEPSFGHGDFLLPAIDRLLASWTVQGRPEPVPALARAIQGVELHRASWSHALELVVARLRQEGITAADAETLARAWLLQGDFLLAELDGPFDVVIGNPPYVRQELIADALMAEYRARYATIYDRADIYVPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K9</accession>
    <name>A0A2M9P7K9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001811">
        <property type="protein sequence ID" value="PJN93498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="20049" checksum="AE8408FBA2B337AF" modified="2018-04-25" version="1" fragment="single">MLSGTEIDPAITDIVLDMSALSIGIGFPVAKMLLGDCEIAGDRSFHILIVSNPELDDRISSEPAERAMPVKGFSGLGGLPQMLDPARIWIPQLARGRKAALTTISLSVGECYKICPVLPFPARDPRRADALVGEYENEIVNEWQVDPRDLVYVSERNPLDSYNTISTLKERYNLTVEGTYEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M3</accession>
    <name>A0A2M9P7M3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001777">
        <property type="protein sequence ID" value="PJN93525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024501">
        <property type="entry name" value="DUF3141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11339">
        <property type="entry name" value="DUF3141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="21780" checksum="CF3833CE402C53D8" modified="2018-04-25" version="1" fragment="single">YALWSRIDTEPERYLGFEKWWGGHVTLNAEEMQWIVDELFVGNRLASGDIRTSDGTVVDLRNIRSPIVVFCSRGDNITPPQQALDWILDLYDSVDDIRAHGQTIVYAIHDHIGHLGIFVSAGVARKEHEEFASNIDLIDVLPPGLYQATFTPKAEAEVGADLVAGDWVMRCEARTLDDIRALGGNDLADERRFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M9</accession>
    <name>A0A2M9P7M9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-hydroxyacyl-CoA dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001744">
        <property type="protein sequence ID" value="PJN93547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="6022" checksum="2D49900EE4953884" modified="2018-04-25" version="1" fragment="single">PRRRRRPSAGPRPFRPRLGRPEEFARLAAFVIENPMLNGEIIRLDGALRMGPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N3</accession>
    <name>A0A2M9P7N3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hybrid sensor histidine kinase/response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001717">
        <property type="protein sequence ID" value="PJN93561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="1"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12423" checksum="C0B71162B144F2DB" modified="2018-04-25" version="1" fragment="single">GFTFDVAQHGAEALIAWERRAYDLILMDVEMPVLDGFEATRELRRREQAQGRAPIPIIALSADAMLENREMARLVGMDDFITKPIELDRLERLIDAHVGARPRGRIGAPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q3</accession>
    <name>A0A2M9P7Q3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3'-kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001770">
        <property type="protein sequence ID" value="PJN93530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11145" checksum="DB4C6642B23CD2C4" modified="2018-04-25" version="1" fragment="single">LFHKADEDNQADPSSIFIRGAAVARRLLAEDTPSYVLHGDLHHENIRHHPERGWLAIDPKGLYGDRAYDAANALCNPGTLPEIVLNPDRLLRQATIMLTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U3</accession>
    <name>A0A2M9P7U3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001664">
        <property type="protein sequence ID" value="PJN93603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7064" checksum="FC6325961F1B9D27" modified="2018-04-25" version="1" fragment="single">LTEFGRWRRRTLWLAGTGAALGALLGAFLLVWGLMVLGASSPRLCGALGGQHGANQQGTAFCAYWEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U6</accession>
    <name>A0A2M9P7U6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">P-type DNA transfer ATPase VirB11</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19690</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001673">
        <property type="protein sequence ID" value="PJN93595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="3797" checksum="6429FF19D814E1B4" modified="2018-04-25" version="1" fragment="single">GGTSSGKTTVARALLSLANRSERLVTIEDARELPIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W6</accession>
    <name>A0A2M9P7W6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lauroyl acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001637">
        <property type="protein sequence ID" value="PJN93618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="19"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7325" checksum="B61810409F011C9F" modified="2018-04-25" version="1" fragment="single">MSGILVEHVWKEYGPQVVLENISIEIADRAFVALVGPSGCGKTTFLRMLLGQEAPTRGRILPDARDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P878</accession>
    <name>A0A2M9P878_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001509">
        <property type="protein sequence ID" value="PJN93729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014708991" evidence="2">
        <location>
            <begin position="31"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17232" checksum="DFFF89D899812CA0" modified="2018-04-25" version="1" fragment="single">MTRFHPTRRRFLAAAAATGALLAAPSILRAQSYATRPITIVVPNAAGGGNDLFARLIQPALQAELGQPVMVENRPGAAGNIGLAYARDAGPDGHTLFCSSSGMMATAHTHKNAPGNPVDLFEHVTMLAIGNFTFTIPASLGPKDYAAFRELVRANPGLYKHGTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G0</accession>
    <name>A0A2M9P8G0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Elongation factor Tu</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tuf</name>
        <name evidence="5" type="ORF">CNY89_18205</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001422">
        <property type="protein sequence ID" value="PJN93821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01884">
        <property type="entry name" value="EF_Tu"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03697">
        <property type="entry name" value="EFTU_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041709">
        <property type="entry name" value="EF-Tu_GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004161">
        <property type="entry name" value="EFTu-like_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033720">
        <property type="entry name" value="EFTU_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03144">
        <property type="entry name" value="GTP_EFTU_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00315">
        <property type="entry name" value="ELONGATNFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 5" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1 5" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="4">
        <location>
            <begin position="1"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029554"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="28738" checksum="7ED64BBA5E544271" modified="2018-04-25" version="1" fragment="single">ERARGITISTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLAKQVGVPAMVVFLNKVDQVDDPELLELVEMEVRELLTSYDFPGDDIPIITGSALAALEGRDPEIGEQAVRKLLAAVDEYIPTPERPVDQPFLMPVEDVFSISGRGTVATGRIERGVVKVGEEIEIVGIRPNKKTTCTGVEMFRKLLDQGQAGDNVGLLLRGVDREGVERGQVLCKPGSVKPHTKFEAEAYILTKEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H8</accession>
    <name>A0A2M9P8H8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001413">
        <property type="protein sequence ID" value="PJN93834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6495" checksum="1561ACEEDC4D9496" modified="2018-04-25" version="1">MAQFAAGGPNPVLIYFLESTARAMAEITGGSPFVTSATASARPRAARGCRWRSSPPEGPIRC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T4</accession>
    <name>A0A2M9P8T4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001322">
        <property type="protein sequence ID" value="PJN93941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10664" checksum="BB7EE2F49802F354" modified="2018-04-25" version="1" fragment="single">MPEAEALPEALIDTHRHLVLRDSLGYAWTDTLPPLAGAFTPGDYDRLTEGAGIAGVLHMETGVDERDWRVTHHLLMSDVAQKRDLTDPRTVRDFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P917</accession>
    <name>A0A2M9P917_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Methyltransferase</fullName>
            <ecNumber evidence="3">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_16965</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the N(4)/N(6)-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001261">
        <property type="protein sequence ID" value="PJN94021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="4">
        <location>
            <begin position="20"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="20269" checksum="2BCC4B8BD0A53B2B" modified="2018-04-25" version="1" fragment="single">PATLDELDAKGDIFWSKNGNPRRKVYLDESAGVSVQDIWMDYRDAHNQMVHVTGYPTEKNINLLRRIVEASSNPGDIVLDCFCGSGTALVAADMLERKWIGVDNSPEALRTMLGRFEHGTKPMGDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLLSVEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C6</accession>
    <name>A0A2M9P9C6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YCII domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16240</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001171">
        <property type="protein sequence ID" value="PJN94147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005545">
        <property type="entry name" value="YCII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03795">
        <property type="entry name" value="YCII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YCII" evidence="2">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9896" checksum="F71B78AC14F8B90C" modified="2018-04-25" version="1">MLFAVICDDRPDGLDIRLANRPAHVGYLKESGVVVQAGPFLDDEGKMRGSLVIIDVPNREAAEAWAECDPYGLAGLFQRVEIRAWNKVIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F7</accession>
    <name>A0A2M9P9F7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001171">
        <property type="protein sequence ID" value="PJN94149.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94149.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8008" checksum="315EAB472500ED12" modified="2018-04-25" version="1">MFGGQGRDTLWLTLADETQAAVEADWIPGAARQTLAALGLETLGIERLVFLDPEDGPGAIVTPARLDEALLWGFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L3</accession>
    <name>A0A2M9P9L3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon monoxide dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001123">
        <property type="protein sequence ID" value="PJN94212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008274">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037165">
        <property type="entry name" value="AldOxase/xan_DH_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02738">
        <property type="entry name" value="Ald_Xan_dh_C2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56003">
        <property type="entry name" value="SSF56003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ald_Xan_dh_C2" evidence="1">
        <location>
            <begin position="1"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="334" mass="34971" checksum="2A884690C9F6A3BB" modified="2018-04-25" version="1" fragment="single">GFGVASYIEACGIAPSNLVGQLGARAGLYESASVRVNATGSVSVFTGSHSHGQGHETTFPQVVASMLGIDESQIDIVHGDTGRIPFGMGTYGSRSLAVGGSAIFKATEKIIAKAKKIAAHMLEASDADIEMKDGKFNVVGTDRSVAWTDVTLAAYVPHNYPLDQIEPGLEETAFYDPSNFTYPAGAYGCEVEVDPETGKVEVLAFSAADDFGNVVNPMIVEGQVHGGLAQGIGQALMERCVYDETGQLQTGSYMDYAMPRAEDLPSFHVDHSCVTPCTHNPLGVKGCGEAGAIGSPPALVNAVIDALQSGGHDVRHIDMPLSPARVWAAIQSVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L8</accession>
    <name>A0A2M9P9L8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">NYN domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15780</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001114">
        <property type="protein sequence ID" value="PJN94225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021139">
        <property type="entry name" value="NYN_MARF1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01936">
        <property type="entry name" value="NYN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NYN" evidence="2">
        <location>
            <begin position="7"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="172"/>
            <end position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="22088" checksum="D197F96D1F6EF6D2" modified="2018-04-25" version="1">MFYRDERLALFIDGANLYAAARALGFDIDYKLLRSEFVRRGKLVRAFYYTSMLETDEYSPIRPLVDWLNYNGFAMVTKPAKEFTDSMGRRKIKGNMDIELAVDAMEMAPHIDHMVLFSGDGDFKPLIESIQRQGVRVSVVSTIRSSPPMIADELRRQCDNFIELEELREVIGRPPRGEQTTQRVHAETDDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T4</accession>
    <name>A0A2M9P9T4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001065">
        <property type="protein sequence ID" value="PJN94290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="265"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="370" mass="39042" checksum="C5C0C48FE802710A" modified="2018-04-25" version="1" fragment="single">VPADEASAAFLAGTRQILTGAQLGSAILSSPTDLWTMRMAARSIGMNGRSVWARHSKLLTSAATRETAAQMGYVADTLADAGSASARYLGDVWSPEITSRITNGVLRASGLSFWTDCARQAWQMEFSGFLASQAGQAFADLPRALRALFSARGITAADWDKLRDPSSLFTAPNGSKFLSPLIFAQTSRLPKSEAEGLSVRLGAVIEQEMEFAVPSVSIEGRTGWLGDAKPGTFSGELLRSGLMYKSFALSVTLNLIRRAMAQRNLTSRAVFVASMIAGLTVLGSVSVQLKEMAKGRDPRPMNDPAFWGAAFLQGGGLGIFGDFLTSEVNRMGGGWAETLTGPVVGLGADVARAVTSTSARSIWSASPSSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH6</accession>
    <name>A0A2M9PAH6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000919">
        <property type="protein sequence ID" value="PJN94538.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="241"/>
            <end position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94538.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="335" mass="37088" checksum="B8FDA613126044AA" modified="2018-04-25" version="1">MVADRVQAFEARYGRTSLYLAAHAAVAHRLRPEIVALTRTNFLPSPHRFQAAHDADVLFGPLCTFQGDGFFEMQPEIKDFLVDVLDRIFSPGPSGRFRSQDVARMLRHHLRKAAAEPHADGPRYERFRQENLWRAIAIDDPLTARDHMRAHARARDGMAREALPGAPRGAGIVSVAGPVLGLFQEDMAYLEVQDMIADGRDEEAVAVLELMVETWAEVPAALLLSEERMFLTRRRNMAGEAGTATGAKAPARPSAAPSAFANDSKVDRARLDLRDTALTRAPWPATRRHSKRRWPRPILSWISSTATGSQRCTTRCAAVIPSSRFGCSTRAPTST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL8</accession>
    <name>A0A2M9PAL8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Molybdenum cofactor biosynthesis protein B</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">moaB</name>
        <name evidence="4" type="ORF">CNY89_13635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">May be involved in the biosynthesis of molybdopterin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MoaB/Mog family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000889">
        <property type="protein sequence ID" value="PJN94586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00886">
        <property type="entry name" value="MogA_MoaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012245">
        <property type="entry name" value="MoaB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013484">
        <property type="entry name" value="MoaB_proteobac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43232">
        <property type="entry name" value="PTHR43232"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006443">
        <property type="entry name" value="MoaB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02667">
        <property type="entry name" value="moaB_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00177">
        <property type="entry name" value="molyb_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="3">
        <location>
            <begin position="11"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00015262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR006443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="18976" checksum="285CBDB7CCCACD85" modified="2018-04-25" version="1">MEREFLPVRIAVLTVSDTRGLAEDRSGDVLAGRLEAAGHVLADRKILRDEQAEIAAQLRAWIADPGVDVVISTGGTGLTGRDVTVEAHESVYEKAIPAFGTLFTMISFQKIGTSAIQSRACAGVAGGTYLFALPGSPGACKDAWDGILAAQLDYRHMPCNFVEILPRLEEHRRRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB12</accession>
    <name>A0A2M9PB12_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MgtE_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000811">
        <property type="protein sequence ID" value="PJN94718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.60.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006668">
        <property type="entry name" value="Mg_transptr_MgtE_intracell_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038076">
        <property type="entry name" value="MgtE_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03448">
        <property type="entry name" value="MgtE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MgtE_N" evidence="1">
        <location>
            <begin position="11"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8641" checksum="35AAA4DA5D7FCC5C" modified="2018-04-25" version="1" fragment="single">EGTLAMADKAAERDIEHMTAVYAAMKPADAARIFGRMDVTFASGLLVRLDPKTAAAILTGMEPEAAYALTVTASSRNAGAPTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB59</accession>
    <name>A0A2M9PB59_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Tnp_DDE_dom domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000780">
        <property type="protein sequence ID" value="PJN94774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13701">
        <property type="entry name" value="DDE_Tnp_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="1"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="243" mass="27436" checksum="9F1380B7992E41DD" modified="2018-04-25" version="1">MDDTFDPVHGGQQLRLFNAHYDNYGFQPIVVFDGAGRFVAAVLRPARRPKGREIAAHLRRLIRTIREHWLRVEILLRGDGHYCAPEVLDLCRTHGVDFVFSLPTTRVLRRHVAPIEASTAARAQAADGARGRRFKEFHDAAASWSRVERIIARVEAGPFGCDSRFIVTRLTGGSGKAIYEKLYCARGQAENHIKVWKAHLAADRTSCSSAAANQLRLFLHAGAYWLMWTLRAALPKRSPWRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF6</accession>
    <name>A0A2M9PBF6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">F0F1 ATP synthase subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11915</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000724">
        <property type="protein sequence ID" value="PJN94867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.520.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026015">
        <property type="entry name" value="ATP_synth_OSCP/delta_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000711">
        <property type="entry name" value="ATPase_OSCP/dsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11910">
        <property type="entry name" value="PTHR11910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00213">
        <property type="entry name" value="OSCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00125">
        <property type="entry name" value="ATPASEDELTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47928">
        <property type="entry name" value="SSF47928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5" id="KW-0139">CF(1)</keyword>
    <keyword evidence="2" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9280" checksum="7845E2F76C60DB78" modified="2018-04-25" version="1" fragment="single">MTSGVAARYATAVFELAREGGSIEKVEADLAAIEAALAESPELREMISSPVFSRQDTVNAVRAIADRMGLGLEVKNTLALMASNRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ4</accession>
    <name>A0A2M9PBQ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000669">
        <property type="protein sequence ID" value="PJN94970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8614" checksum="3961E184D0F1794C" modified="2018-04-25" version="1">MNRPETPEGWQVWDLVGRLGGQLRVLPGAVIGWDMSAALALGDALGVPRLAMAELLPVIEAVMVRKLNEELSTNGGPGVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT1</accession>
    <name>A0A2M9PBT1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Alcohol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the zinc-containing alcohol dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000655">
        <property type="protein sequence ID" value="PJN94998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020843">
        <property type="entry name" value="PKS_ER"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00829">
        <property type="entry name" value="PKS_ER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="PKS_ER" evidence="3">
        <location>
            <begin position="13"/>
            <end position="332"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="357" mass="37751" checksum="D7758197A086ADCC" modified="2018-04-25" version="1" fragment="single">MTTVKAYAAPAAGAPLEPFEYTLPEIGPKDIDIEVVSSGVCHSDLSMIDNEWGFSAYPLVCGHEVIGRVAAMGSAVTSVAQGDLVGLGWHAGYCMTCPQCMSGHHNTCPTGEVTIVGRHGGFADRVRAREGAVIKLPSGLDPMEAGPLLCGGVTVFNPIATHVKPTDRVGVIGIGGLGHLALKFLKAWGCEVTAFTSSEGKRNEAMALGATDTIDSRDAEAVAAAAGRFDMILSTVNAKLDWNAYVGALAPRGRLHSVGAVLEPFDFQAFAFLTGERSFGSSPVGSPTMIAEMLAFAARHDILPQTEHFAMSDVNDALDHLRAGKARYRIVLDAAVRRSLGPGRRWRTQDGRPALRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ6</accession>
    <name>A0A2M9PBZ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_10690</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000622">
        <property type="protein sequence ID" value="PJN95067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025857">
        <property type="entry name" value="MacB_PCD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12704">
        <property type="entry name" value="MacB_PCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="332"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="367"/>
            <end position="386"/>
        </location>
    </feature>
    <feature type="domain" description="MacB_PCD" evidence="9">
        <location>
            <begin position="20"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="8">
        <location>
            <begin position="309"/>
            <end position="396"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF12704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="403" mass="42691" checksum="24F03C9EC97B52A5" modified="2018-04-25" version="1">MLRETVRLAFQAIFRNAMRSFLTVLGVVIGVAAVIAMVTVGQGSTDQVTQDVAKLGTNLLMVRPGQAQQGPQTSAGTAAAFDARDVEAIQAQVAGVRAAAPANTRTMTAILGAQNHSTSVIGTDSRYLEARDMPVALGRAFYESELRTGAAVCLLGETVRRELFGAGDPIGQSFRLKAISCRVIGVMEEQGVSSFGTDQDDFVLIPIRTFQRRIAGNADVSMIYVAVEDGVSTEDAKAEIERLMRERRRIGPGDEDDFNVFDMKQIASVLTGITGVLTGLLAAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAVGAQEGQVLRQFLVEAIVLSLLGGLIGILLGLGLGAIGARLLRVPFAPDPGLILLAFGFSAAIGVVFGYFPARRAARLNPIEALRHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC19</accession>
    <name>A0A2M9PC19_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Thiol-disulfide oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_10560</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">May be required for disulfide bond formation in some proteins.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the thioredoxin family. DsbA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000611">
        <property type="protein sequence ID" value="PJN95091.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012336">
        <property type="entry name" value="Thioredoxin-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13462">
        <property type="entry name" value="Thioredoxin_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014935622" evidence="3">
        <location>
            <begin position="25"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="4">
        <location>
            <begin position="4"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95091.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21656" checksum="168E957BB0C0059D" modified="2018-04-25" version="1">MTRRDLIAGAAALAALSLAGPLAAQGVRPVVEMSLGSPDAPVTLIEYASFTCPHCAAFNKEVMPQLKAEYIDTGKVRLVYREVYFDGPSLWASVVARCAGEDRFFGVVDVLFARQAEWAHAQSGQDVVAGLTSIGKTAGLTEGEVMACLNDETFRKSLVEEFQKNAAADDVRATPSFVLNGRKLANMPWPEFKAEIDAALGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA4</accession>
    <name>A0A2M9PCA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000579">
        <property type="protein sequence ID" value="PJN95153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6725" checksum="4D3E1802389167FF" modified="2018-04-25" version="1" fragment="single">EAVLRLRRANAGRIWLAGTAMALPLSLPVVNLLVPILGVAVFTHQFHRMAGDSVIAVPRSPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK3</accession>
    <name>A0A2M9PCK3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000520">
        <property type="protein sequence ID" value="PJN95275.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95275.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="259" mass="27149" checksum="9468FD356400C299" modified="2018-04-25" version="1" fragment="single">MAAPIVNPPLIAGTPSVSTRESWIAQIQSAITQAWTQMHALLSKNLIDTVSPGGTGNAITVLIPSDYAEVPVGIGSMWLIEPPSANTGPATLSVGGEAPLPLLTSEGNPLPAQYTTAGRRFVAQRRGVGEGLHYRILFSLNDVWPDLVRVGVFKTVSEAGTGNAITAATPAGVQGKFTKALGQLFLIRPPRTNAGGPVTLSIDGETPVRVYDQDNQDPVAGEIVGRRWTLVRYSTSGPQYNLVGGTVTMRQLTALLGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL7</accession>
    <name>A0A2M9PCL7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Glutamine--fructose-6-phosphate aminotransferase [isomerizing]</fullName>
            <ecNumber evidence="2">2.6.1.16</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">glmS</name>
        <name evidence="10" type="ORF">CNY89_09365</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:13237"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58725"/>
            <dbReference type="ChEBI" id="CHEBI:61527"/>
            <dbReference type="EC" id="2.6.1.16"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.16" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000515">
        <property type="protein sequence ID" value="PJN95289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004360">
        <property type="term" value="F:glutamine-fructose-6-phosphate transaminase (isomerizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901137">
        <property type="term" value="P:carbohydrate derivative biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05008">
        <property type="entry name" value="SIS_GlmS_GlmD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035466">
        <property type="entry name" value="GlmS/AgaS_SIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005855">
        <property type="entry name" value="GlmS_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10937:SF0">
        <property type="entry name" value="PTHR10937:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01380">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01135">
        <property type="entry name" value="glmS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="7" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="8">
        <location>
            <begin position="2"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="domain" description="SIS" evidence="9">
        <location>
            <begin position="282"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="425"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="425" mass="45645" checksum="4588FAFC603A1EE4" modified="2018-04-25" version="1" fragment="single">MCGIVGILGTHEVAPLILESLKRLEYRGYDSAGIATLHQGRLGRRVALGKLIALSDLLVEDPIRGRIGIGHTRWATHGAPSLRNAHPHLAGRVAVVHNGIIENFRALRAELQAEGRDFASDTDTEIVAHLCDRALETGLTPLEAVRDTLPRLEGAFALVFLFEGHPDLMIVARRGSPLAIGHGEDEMYVGSDALALATLTHRISYLEEGDHAVLTRAGASVYDAEGRPVRREIQSTPLEALHAEKGPYKHFMAKEIHEQPTAIASALGHYLNAERDAVTLPGGIDLAGASRLTLVACGTAHYACHVAKYWIEGVARLPVDIEVASEFRYREPPLDRDTIGVFVSQSGETADTLAALRHMRAQGCRTLAVVNVATSTIARESDLALPILAGPEIGVASTKAFTCQLVTLACLAVAAARARPARSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR8</accession>
    <name>A0A2M9PCR8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000494">
        <property type="protein sequence ID" value="PJN95339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="30" mass="3318" checksum="ED77D1B28CB0C07F" modified="2018-04-25" version="1" fragment="single">VTLVDLDPEAVAEARARVPSLQHDRDFAEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT2</accession>
    <name>A0A2M9PCT2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000502">
        <property type="protein sequence ID" value="PJN95324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10169" checksum="7D71AFEB9A840478" modified="2018-04-25" version="1" fragment="single">TFDAERLHYDLAYARAQGCPGLAAQDRLLAILLLEAARRRREGAWPAAVALQRVRPFYATGPLGLIASPEDHGRQALAATDAAGVCLAAEIAWEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT5</accession>
    <name>A0A2M9PCT5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Enoyl-CoA hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000499">
        <property type="protein sequence ID" value="PJN95328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045004">
        <property type="entry name" value="ECH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16113">
        <property type="entry name" value="ECH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ECH_2" evidence="1">
        <location>
            <begin position="15"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11412" checksum="FAAFBD11B0CE9D3F" modified="2018-04-25" version="1" fragment="single">MSGLHLLIDGAIAELRLDNAGKLNALTTHMLEELDSHCGALERDPEIRAVILTAEGDRAFCAGADIVAWGALSAADFSRHWVREGHRIFGPLARLSKPDRRRDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX7</accession>
    <name>A0A2M9PCX7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fe3+/spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000472">
        <property type="protein sequence ID" value="PJN95390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="28"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="5533" checksum="8706BE8E51A7AE2B" modified="2018-04-25" version="1" fragment="single">MNRHPSDAGGVRLSMSAVRKAYDGAAALDDVSLELAAGEVTCLLGPSGCGKSTLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX9</accession>
    <name>A0A2M9PCX9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">30S ribosomal protein S20</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rpsT</name>
        <name evidence="10" type="ORF">CNY89_08830</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 8">Binds directly to 16S ribosomal RNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the bacterial ribosomal protein bS20 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000476">
        <property type="protein sequence ID" value="PJN95378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00500">
        <property type="entry name" value="Ribosomal_S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002583">
        <property type="entry name" value="Ribosomal_S20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036510">
        <property type="entry name" value="Ribosomal_S20_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33398">
        <property type="entry name" value="PTHR33398"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01649">
        <property type="entry name" value="Ribosomal_S20p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46992">
        <property type="entry name" value="SSF46992"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00029">
        <property type="entry name" value="S20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="9">
        <location>
            <begin position="9"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015666"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00500"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9896" checksum="C2F0302784985DB6" modified="2018-04-25" version="1">MANSPSSKKRARQTERRTEVNKARRSRIRTFIRKVEEAIAGGDKAVAAEALRVAQPEIMRGVTKGVTHKNTAARKISRLASRVSAIQAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ0</accession>
    <name>A0A2M9PCZ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter substrate binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000464">
        <property type="protein sequence ID" value="PJN95407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017082">
        <property type="entry name" value="YflP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="34888" checksum="20CB2C612B0D9085" modified="2018-04-25" version="1">MIQSVSRRDLLRGAALGAAWLAAPNVLRAQDWPSKPVNIVLGFPPGGGLDTYARLLAPFLSERLGQPVLVENRAGASGNIGTQYVVNARPDGYTILFGTASAMAAASYSFPDLAFDPITDLDQISLLTDSSYVMLASQELPASTWEEFVALAKAEPGKIVHACPGVGSANHLLGELVSLRAGIEINTVQYKGGGPAMTDLLANQANVTFISVGQAEPYVASGRLKGLLNCAPERAALLPDVPASVEFGLTDVDRLMFWISASAPKGTPVEALDGFQRAIVDCYQNPDLTARMAAAGLRPVGSTRTEFEARLNADHALVGQVIRDSNLKLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD90</accession>
    <name>A0A2M9PD90_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyltransferase family 8 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000423">
        <property type="protein sequence ID" value="PJN95506.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002495">
        <property type="entry name" value="Glyco_trans_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01501">
        <property type="entry name" value="Glyco_transf_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95506.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="266" mass="29751" checksum="A4824AB5EFEE7A3F" modified="2018-04-25" version="1" fragment="single">MVVICDPNYVIPTLATALSVERHVKAENVRICLFVVGADPETIGRVQAAAGTRIRVRSADLPRFADYARNHRDRYLPAIALARFWLGDLLDPEIDRFLYLDGDVMVDGALDGLLAAPPPEGRLMAAPDALSIYIDETLSRGRHHDLAYLAGLRCPSGDYFNSGVIYVSRRTWAEIVPVAKAFLLKHPERCRSSDQSALNFAARGRLGLLPLRYNYQSEHMMAFDPRDRGMRPTIWHFSSAPKPWDAAGWPWEGAFARDYAEAAARL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH3</accession>
    <name>A0A2M9PDH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000398">
        <property type="protein sequence ID" value="PJN95562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014812589" evidence="1">
        <location>
            <begin position="20"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10189" checksum="AF3634DB50E55598" modified="2018-04-25" version="1">MSRILAAALLLATALPAGAQIKWGDQFDEITCGQWEPLDMTGRIEKLKAIEPFGSDLEQADRGAAEQWEAEVAAACKGHPDRLLRDAATQALGPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM1</accession>
    <name>A0A2M9PDM1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acetyl-CoA C-acyltransferase</fullName>
            <ecNumber evidence="5">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07385</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the thiolase-like superfamily. Thiolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000373">
        <property type="protein sequence ID" value="PJN95623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020610">
        <property type="entry name" value="Thiolase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020617">
        <property type="entry name" value="Thiolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020613">
        <property type="entry name" value="Thiolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02803">
        <property type="entry name" value="Thiolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00737">
        <property type="entry name" value="THIOLASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00099">
        <property type="entry name" value="THIOLASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="3">
        <location>
            <begin position="2"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="Thiolase_C" evidence="4">
        <location>
            <begin position="104"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02803"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="23534" checksum="C19CDB5BBC1F5EDE" modified="2018-04-25" version="1" fragment="single">AAAWAEGRFARSVIPVRDVNGLTLLERDEHPRPATDMQSLGALKPAFKEMGEVMPGFDAVALLKYPHLERIEHVHHAGNSSGIVDGAAAVLIGSKAFGEKHGLRPRAKLRATARVGTDPTIMLTGPVPATERALAAAGMRIGDVDLFEVNEAFSAVVLRFLQAFGVSEARVNVNGGAIAMGHPLGATGAMILGTALDELERSGKGVALATLCVASGMGAATIIERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN3</accession>
    <name>A0A2M9PDN3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GIDA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07130</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000354">
        <property type="protein sequence ID" value="PJN95667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIDA" evidence="1">
        <location>
            <begin position="10"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="3879" checksum="1F7D5CCD3E7A39F3" modified="2018-04-25" version="1" fragment="single">MFHVKHRNADVIVVGGGHAGCEAAHAAWRLGAQVTLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN6</accession>
    <name>A0A2M9PDN6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Shikimate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000375">
        <property type="protein sequence ID" value="PJN95618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="22470" checksum="BB752144A827FD31" modified="2018-04-25" version="1" fragment="single">IQAAGGEAIAVQADVTSRDAVKAMIAAAVGAYGRLDVIFNNAGIAQTRPFLSITEEDWRRVMDVNGLGVLIGMQEAIRQFQAQGKDETGFGGRIVNTASIAGKQGYEPLAHYCASKFGVVALTQAAARAFGKDGISANAICPGVVATDMWKVIDKGFKDEGLTSRDGEAFDGFAAGILLGRASVAEDLAGVAVFLASPASDYMTGQSLVVDGGMVFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ4</accession>
    <name>A0A2M9PDQ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Carbam_trans_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000359">
        <property type="protein sequence ID" value="PJN95653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.870.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031730">
        <property type="entry name" value="Carbam_trans_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038152">
        <property type="entry name" value="Carbam_trans_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16861">
        <property type="entry name" value="Carbam_trans_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carbam_trans_C" evidence="1">
        <location>
            <begin position="18"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20311" checksum="54465B68852A5A7D" modified="2018-04-25" version="1">MTPPDPVTEDDLIAAVVEELAGGGVVAWHQGRTEYGPRALGSRSILADPRHDSIREAINAKIKKRELFRPFAPSTTIEACGAFFEIDQPSPYMNILAAVRAEKRDVIPAVTHVDGTARVHTVSAEANPLYHRLITAFGARTGVPVLLNTSFNIQEPIVNTPAEALATYRASGMDLLAIGRRLYRRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR7</accession>
    <name>A0A2M9PDR7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000344">
        <property type="protein sequence ID" value="PJN95691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014650801" evidence="1">
        <location>
            <begin position="21"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8609" checksum="35507AD90A46F721" modified="2018-04-25" version="1">MNFILTGLALLIAPAAFAQATPEQLAQIDTLLAAEQCEVDHANVEVEDGGGFDLDDVMCADGQYDIKLGPDMTIAERRKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY1</accession>
    <name>A0A2M9PDY1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000327">
        <property type="protein sequence ID" value="PJN95732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7934" checksum="997C71BDCD47970C" modified="2018-04-25" version="1">MPTMTTAQAVHGRSLASDLATYLREALTQRLTYRRTLAELRALPDRMLRDLGFTRAELKTIARRETYGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB7</accession>
    <name>A0A2M9PEB7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Acyl-CoA esterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05770</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the acyl coenzyme A hydrolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000265">
        <property type="protein sequence ID" value="PJN95897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016790">
        <property type="term" value="F:thiolester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040170">
        <property type="entry name" value="Cytosol_ACT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033120">
        <property type="entry name" value="HOTDOG_ACOT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11049">
        <property type="entry name" value="PTHR11049"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51770">
        <property type="entry name" value="HOTDOG_ACOT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HotDog ACOT-type" evidence="4">
        <location>
            <begin position="7"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51770"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13844" checksum="2CDED85627514552" modified="2018-04-25" version="1">MTEDPAPQGALCLQTIAMPADTNANGDIFGGWIMAQMDLGASVLARGRARGRVATVAVDKMAFHRPVWVGDVVSIHCEMLSEGRTSMTLEVEVWALRQPSGARFKVTEAKFVFVAVDEQGTKRALPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED8</accession>
    <name>A0A2M9PED8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">S-adenosylmethionine synthase</fullName>
            <shortName evidence="11">AdoMet synthase</shortName>
            <ecNumber evidence="11">2.5.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">MAT</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Methionine adenosyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">metK</name>
        <name evidence="18" type="ORF">CNY89_05895</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11">Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + H2O + L-methionine = diphosphate + phosphate + S-adenosyl-L-methionine</text>
            <dbReference type="Rhea" id="RHEA:21080"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.5.1.6"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="11">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="11">Binds 2 divalent ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 11">Amino-acid biosynthesis; S-adenosyl-L-methionine biosynthesis; S-adenosyl-L-methionine from L-methionine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="11">Homotetramer; dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11 12">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11 13">Belongs to the AdoMet synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.6" evidence="11"/>
    <dbReference type="EMBL" id="PHNO01000273">
        <property type="protein sequence ID" value="PJN95882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00315">
        <property type="reaction ID" value="UER00080"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004478">
        <property type="term" value="F:methionine adenosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006556">
        <property type="term" value="P:S-adenosylmethionine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00086">
        <property type="entry name" value="S_AdoMet_synth1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022631">
        <property type="entry name" value="ADOMET_SYNTHASE_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022630">
        <property type="entry name" value="S-AdoMet_synt_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022629">
        <property type="entry name" value="S-AdoMet_synt_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022628">
        <property type="entry name" value="S-AdoMet_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002133">
        <property type="entry name" value="S-AdoMet_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022636">
        <property type="entry name" value="S-AdoMet_synthetase_sfam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11964">
        <property type="entry name" value="PTHR11964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02773">
        <property type="entry name" value="S-AdoMet_synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02772">
        <property type="entry name" value="S-AdoMet_synt_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00438">
        <property type="entry name" value="S-AdoMet_synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000497">
        <property type="entry name" value="MAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55973">
        <property type="entry name" value="SSF55973"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01034">
        <property type="entry name" value="metK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00376">
        <property type="entry name" value="ADOMET_SYNTHASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00377">
        <property type="entry name" value="ADOMET_SYNTHASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9 11 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 11 12" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 11" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="10 11 12" id="KW-0630">Potassium</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11 18" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="S-AdoMet_synt_N" evidence="15">
        <location>
            <begin position="7"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_M" evidence="16">
        <location>
            <begin position="117"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="S-AdoMet_synt_C" evidence="17">
        <location>
            <begin position="236"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Flexible loop" evidence="11">
        <location>
            <begin position="102"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="14">
        <location>
            <begin position="386"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="14">
        <location>
            <begin position="391"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="46"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="167"/>
            <end position="169"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="233"/>
            <end position="234"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="248"/>
            <end position="249"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="265"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <note>ligand shared between two neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="269"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <note>ligand shared between two neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="273"/>
        </location>
        <ligand>
            <name>L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009685"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF00438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF02772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="PJN95882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="406" mass="43718" checksum="F4626E5572586D31" modified="2018-04-25" version="1">MQTRQDYIFASESVSEGHPDKVCDRISDAVLDAFLTADPEARVGCETFATTDRVVVGGEVRGPADVLKDVENIVRACVRDIGYEQKGFHWATLHVHNYIHGQSPHIAQGVDGGADKEEGAGDQGIMFGYAVDETPELMPAPIHYAHAMLRRLAEARKTGQEPRLGPDAKSQLSLRYADGQPVEVSSLVLSTQHLDEEMSSAAVREMIEPYLREVLPEGWLTKNTAWHVNPTGRFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYLAKNVVAAGLAKRCVIQLSYAIGVARPLSIYVNTLGTGEVSTEAIEKAVAGVMDLTPKGIRTHLGLNRPIYQRTSAYGHFGRAPDADGGFSWERTDLVDAATGHPLRQEPPPGPRRPFGRSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE1</accession>
    <name>A0A2M9PEE1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-serine ammonia-lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05800</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000267">
        <property type="protein sequence ID" value="PJN95893.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005130">
        <property type="entry name" value="Ser_deHydtase-like_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03313">
        <property type="entry name" value="SDH_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SDH_alpha" evidence="1">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95893.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10244" checksum="C3A742F44DC8281B" modified="2018-04-25" version="1" fragment="single">CAALGGTNAQVENAAEIALEHHLGMTCDPVAGLVQVPCIERNGLGAIKAVAAASLALRGDGTHVVPLDACIETMRQTGRDMSVKYKETSTGGLAVNIPEC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN8</accession>
    <name>A0A2M9PEN8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000225">
        <property type="protein sequence ID" value="PJN96017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="19458" checksum="4A3D6B9CAD3F1163" modified="2018-04-25" version="1" fragment="single">IPTLAYVTGAGANGATASPSGLSAGDLLVGVVLKATTTAPTHDPTGGALIGSWSSGASSGIAFWKYAESSTPAFGTHTGGSRCEWFAARFSEPPVNPIGASDRISGGVFTAFSWCGLTLQKSRSMVFTVGYRAANEAILDRTGALAAGAATGVSSRYKPMRSNGEVASWPQEDLTQTVAGVFQSIAIEVGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES4</accession>
    <name>A0A2M9PES4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Acetolactate synthase small subunit</fullName>
            <shortName evidence="8">AHAS</shortName>
            <shortName evidence="8">ALS</shortName>
            <ecNumber evidence="8">2.2.1.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Acetohydroxy-acid synthase small subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_04810</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>H(+) + 2 pyruvate = (2S)-2-acetolactate + CO2</text>
            <dbReference type="Rhea" id="RHEA:25249"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="2.2.1.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 1/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 1/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5 8">Dimer of large and small chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the acetolactate synthase small subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.6" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000210">
        <property type="protein sequence ID" value="PJN96057.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00055"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00059"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003984">
        <property type="term" value="F:acetolactate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990610">
        <property type="term" value="F:acetolactate synthase regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04878">
        <property type="entry name" value="ACT_AHAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004789">
        <property type="entry name" value="Acetalactate_synth_ssu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027271">
        <property type="entry name" value="Acetolactate_synth/TF_NikR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019455">
        <property type="entry name" value="Acetolactate_synth_ssu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039557">
        <property type="entry name" value="AHAS_ACT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30239">
        <property type="entry name" value="PTHR30239"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10369">
        <property type="entry name" value="ALS_ss_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00119">
        <property type="entry name" value="acolac_sm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ACT" evidence="9">
        <location>
            <begin position="30"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00006341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011744"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU368092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96057.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20426" checksum="A026275CA00A32E4" modified="2018-04-25" version="1">MNALHLKRGASKHSAYDLRNPLSDRQETHTLAVLVDNEAGVLARVIGLFSGRGYNIDSLTVAETDHEGRRSRITIVTTGTPAVIEQIKAQLGRIVPVYEVHDLTVEGPSVQRELALIQVQGSGEKRVEAMRMAEVFRARIVDTTLDSFVFELTGAPEKIDTFVALMRPLGLVDIARTGVAALARGKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW9</accession>
    <name>A0A2M9PEW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000199">
        <property type="protein sequence ID" value="PJN96095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021556">
        <property type="entry name" value="DUF2950"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11453">
        <property type="entry name" value="DUF2950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11327" checksum="BE04A437AAC7A418" modified="2018-04-25" version="1">MARAAADGYNLDGGDVEAEPYLGYYFRVLQKQGPAAPGGALDYMVGGRMLAGHALLAFPADYGETGIMTFLIGEAGTVYEADLGEETLDLAGAIDSFDLGEGWTPVEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF06</accession>
    <name>A0A2M9PF06_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">50S ribosomal protein L17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rplQ</name>
        <name evidence="6" type="ORF">CNY89_04620</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit. Contacts protein L32.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 4">Belongs to the bacterial ribosomal protein bL17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000200">
        <property type="protein sequence ID" value="PJN96092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01368">
        <property type="entry name" value="Ribosomal_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000456">
        <property type="entry name" value="Ribosomal_L17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036373">
        <property type="entry name" value="Ribosomal_L17_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14413">
        <property type="entry name" value="PTHR14413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01196">
        <property type="entry name" value="Ribosomal_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64263">
        <property type="entry name" value="SSF64263"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00059">
        <property type="entry name" value="L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01167">
        <property type="entry name" value="RIBOSOMAL_L17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15611" checksum="CE8CBA4E936DB182" modified="2018-04-25" version="1">MRHGNGYRKLNRTHEHRKAMFANMVSSLIEHEQIKTTLPKAKELKRIADKIITLGKRGDLHARRLAQSEIKQEAAVAKLFVTLGPRYKDRQGGYTRVLKAGFRYGDMAPMAIIELVDRDTAAKGAGDKARVAAEAEAVEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF53</accession>
    <name>A0A2M9PF53_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000176">
        <property type="protein sequence ID" value="PJN96173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="19"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="5712" checksum="C9DB318DBD8831EB" modified="2018-04-25" version="1" fragment="single">MAEVRVEGLSKAYGPVKALDDVTLTFPDGGFFGLLGPSGSGKTTLLRAIAGFVAPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB5</accession>
    <name>A0A2M9PFB5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03795</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000160">
        <property type="protein sequence ID" value="PJN96233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03255">
        <property type="entry name" value="ABC_MJ0796_LolCDE_FtsE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017911">
        <property type="entry name" value="MacB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="6"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="24434" checksum="E7CC84593861D800" modified="2018-04-25" version="1">MSPPVIELRDVELTLQGNAGPVKILRGVTMAALKGETLGLVGPSGSGKSSLLMLMGGLETATGGSVRVLGQDFTAMGEDALARFRRDHMGVVFQSFHLIPTMTALENVATPLELAGAEDAFARAEEELRAVGLGARMDHYPAQLSGGEQQRVAIVRALLKRPDWLFLDEATAALDEPMEAQVYALLRTRLPDTTLVSIGHRTTLLDFHDRRIEMRQGADGSFVPAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE1</accession>
    <name>A0A2M9PFE1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Competence/damage-inducible protein A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000151">
        <property type="protein sequence ID" value="PJN96256.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00885">
        <property type="entry name" value="cinA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036425">
        <property type="entry name" value="MoaB/Mog-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001453">
        <property type="entry name" value="MoaB/Mog_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00994">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00852">
        <property type="entry name" value="MoCF_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53218">
        <property type="entry name" value="SSF53218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoCF_biosynth" evidence="1">
        <location>
            <begin position="7"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96256.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="25489" checksum="2AB82EE241D589A8" modified="2018-04-25" version="1">MPNPTAAMLTIGDEILSGRTRDSNMPHLAARLTELGIDLCEARTVPDVAEEIVAAINALRARYTHVFTSGGIGPTHDDITADCVAAAFRVGIDVRADARAILATNYADPERDLNAARLRMARIPDGATLIDNPVSKAPGFTLGNVHVMAGVPAVFEAMVAGLLPTLTGGQPLLSASLRIERPEGLIAEPLGALARAHPAVSIGCYPFNRDGVFGANVVLRSQDPDALAAAEVGLRAMATALEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH7</accession>
    <name>A0A2M9PFH7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03510</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000144">
        <property type="protein sequence ID" value="PJN96278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="310"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="201"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="367" mass="39842" checksum="3F2CBAFD23D644DF" modified="2018-04-25" version="1" fragment="single">RSRSSSASVTIPAADMQAAPVAPPAARIRLRHWMTLASFVLLVLVPFGLTAAYLYGRAADQYHSELAYSIRSEESASAAAGLLGAITNLGTGSASDTDILFEYIRSQGIVEIIDRELDLRAIYNRAEGDPVFTLGPDASIEALVAFWRRMVRISFETGAGIIHVEAKAFTPEDARAISTAILRHSSELVNKLSEQARSDALRFAQEEQTDAEAALQAMRAKLSDFRRENRIVDPSGDVAGQAGLLNALQSELAQALVERDMLSTYADEGDQRMLQANRRIDAIGARIEAERASLGVPGQARPCRRWSGATRSCWSTCSSPTPPIPRRWPTSPRRGRNRAASRATSPPMSSRPGPRARSIRAAPCSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR9</accession>
    <name>A0A2M9PFR9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 13">5-aminolevulinate synthase</fullName>
            <ecNumber evidence="6 13">2.3.1.37</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 13">5-aminolevulinic acid synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10 13">Delta-ALA synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 13">Delta-aminolevulinate synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="primary">hemA</name>
        <name evidence="15" type="ORF">CNY89_02740</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>glycine + H(+) + succinyl-CoA = 5-aminolevulinate + CO2 + CoA</text>
            <dbReference type="Rhea" id="RHEA:12921"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:356416"/>
            <dbReference type="EC" id="2.3.1.37"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 12">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from glycine: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.37" evidence="6 13"/>
    <dbReference type="EMBL" id="PHNO01000106">
        <property type="protein sequence ID" value="PJN96407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00375"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003870">
        <property type="term" value="F:5-aminolevulinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010961">
        <property type="entry name" value="4pyrrol_synth_NH2levulA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001917">
        <property type="entry name" value="Aminotrans_II_pyridoxalP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01821">
        <property type="entry name" value="5aminolev_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00599">
        <property type="entry name" value="AA_TRANSFER_CLASS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 13" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7 13" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="12" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="13" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="14">
        <location>
            <begin position="46"/>
            <end position="390"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001588"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00008392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00013257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU910713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="404" mass="44086" checksum="CD4F2E692D0BE5BE" modified="2018-04-25" version="1">MTYDALFRAQLEALKQEGNYRVFAELERRQGAFPRAVRHAGGETGEVTVWCSNDYLGMGQHPKVLEAMHEALDRCGAGAGGTRNISGTNHDHVLLEAELADLHGKDAALLFTSGYVSNWASLGTLGARLPDCVILSDALNHASMIEGMRHARCEKRIWRHNDPEDLDRHLSEIAPDRPKIVAFESVYSMDGDVAPIAEIVEVAEKHGAMTYLDEVHAVGLYGPRGGGVAEAEGLMDRIDLIEGTLGKAYGVVGGYIAGSHALVDFIRSFASGFIFTTSLPPHVAAGARASIRHLKESSFERMRQRRQVAKLRARLDALGIPHLPNPSHIVPVMVKDPVKCKMISDVLLDSYGIYVQPINYPTVPKGTERLRFTPGPMHSDADLDRLVEALSALWAQCALARAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY1</accession>
    <name>A0A2M9PFY1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6951" checksum="064AD2E83FB9F1E5" modified="2018-04-25" version="1">MTIPYALRTLSRDPATAKLELDGIEAGERWDPQMTADEKAEVRAARLRVERELARKQGRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG55</accession>
    <name>A0A2M9PG55_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein meaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000079">
        <property type="protein sequence ID" value="PJN96502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004494">
        <property type="term" value="F:methylmalonyl-CoA mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016176">
        <property type="entry name" value="Cbl-dep_enz_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006099">
        <property type="entry name" value="MeMalonylCoA_mutase_a/b_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006098">
        <property type="entry name" value="MMCoA_mutase_a_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01642">
        <property type="entry name" value="MM_CoA_mutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51703">
        <property type="entry name" value="SSF51703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00641">
        <property type="entry name" value="acid_CoA_mut_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="METMALONYL_COA_MUTASE" evidence="1">
        <location>
            <begin position="11"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="469"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="469" mass="51270" checksum="C1656895102DB1A9" modified="2018-04-25" version="1" fragment="single">MIQMIRGVGGMTETRRDKPWLFRTYAGHSTAEKSNALYRANLAKGQTGLSVAFDLPTQTGYDSDHILARGEVGKVGVPVSHLGDMRMLFDKIPLEEMNTSMTINATAAWLLALYVAAAEEQGADVSKLQGTVQNDIIKEYLSRGTYVFPPAPSLKLIADVAEYTYRAVPKWNPMNVCSYHLQEAGATPQQELAFALATAVAVLDQVKGQVPAEDFPELVSRISFFVNAGIRFVTEMCKMRAFVDLWEEITETRYGVADPKLRRFRYGVQVNSLGLTEQQPENNVYRILIEMLAVVLSKKARARAVQLPAWNEALGLPRSWDQQWSLRMQQIMAYETDLLEFDDLFDGNPAVDAKVEALKAGARAELARIDEMGGAVAAIDYMKAELVAANTARLGRIEAGETVVVGVNRFKEGEASPLVGSDGGIMVVDPGVEADQIGRIEAGETVVVGVNRFKEGEASPLVGSDGGIM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ2</accession>
    <name>A0A2M9PGJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000043">
        <property type="protein sequence ID" value="PJN96651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="104"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="122"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16320" checksum="7C81DEE367F56BA5" modified="2018-04-25" version="1" fragment="single">FQLSDDFPTEDLAGGPYQELPDPRGRKKHRITEEIRKNVSDLRASGMSQKEVAEAIGISEYILTNYYFQELNGGVAQARARALLNLRNSAEGGNVSAQKAWLKQLESGRGVPPVPKAPADPDAGLGKKERALQAGRRKPEGSWGDLIKH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ6</accession>
    <name>A0A2M9PGJ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Site-specific integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000040">
        <property type="protein sequence ID" value="PJN96669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="148"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="351" mass="38944" checksum="AAEADE378956488C" modified="2018-04-25" version="1">MSLKIVKRGRIWYIRGSVAGQHVYESTGLGEKRAAEAKRARREAELVQRSAHGATATLTFAEAAAVYMESGGETRYLTPIIEHFGPRRRLADIDNRAVNACAAALYPTAATSTINRQVITPISAVVHRAALDDPSLARRFQRRREPQGRLRWLTPEEAERLIAAAPLRVRRIILFLLGTGCRVSEALALDRPQLHLESSEAWIAKAKNADPRMVILPARTRRALAASELPKAGAVFRTPKGERYKVRGSNSGGQIQAAFNSARDEAGLGADVTPHVLRHTWATWYYAATRDFGGLMDFGGWRKADMANRYRKLAPSDLPRRLLKHGWDFGANFVQPETDESGNRSENRSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV7</accession>
    <name>A0A2M9PGV7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="21172" checksum="695F429527A8C445" modified="2018-04-25" version="1">MGLTRGIHPDALAAITAGGAGLYPVSFLWLDWPGEALRLHSEHGVIGWDGHDWLGVGKAASANVPAETFGMAAAPVKLAMAGLPPAIWEALEDPIRNRDAEMWMAIAREVDDEFEIIGAPWDLYAGYMDASRYVQREGAAGPLHQMQLDLKSGPGARSAASAFHSYDSQLLEYPGDTGGRLFINALVRVETMTWPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW0</accession>
    <name>A0A2M9PGW0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Glycogen synthase</fullName>
            <ecNumber evidence="8">2.4.1.21</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">Starch [bacterial glycogen] synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">glgA</name>
        <name evidence="11" type="ORF">CNY89_00570</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 8">Synthesizes alpha-1,4-glucan chains using ADP-glucose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>[(1-&gt;4)-alpha-D-glucosyl](n) + ADP-alpha-D-glucose = [(1-&gt;4)-alpha-D-glucosyl](n+1) + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18189"/>
            <dbReference type="Rhea" id="RHEA-COMP:9584"/>
            <dbReference type="Rhea" id="RHEA-COMP:9587"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15444"/>
            <dbReference type="ChEBI" id="CHEBI:57498"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.4.1.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 8">Glycan biosynthesis; glycogen biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 8">Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.21" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000017">
        <property type="protein sequence ID" value="PJN96776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00164"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033201">
        <property type="term" value="F:alpha-1,4-glucan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004373">
        <property type="term" value="F:glycogen (starch) synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009011">
        <property type="term" value="F:starch synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00484">
        <property type="entry name" value="Glycogen_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011835">
        <property type="entry name" value="GS/SS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013534">
        <property type="entry name" value="Starch_synth_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08323">
        <property type="entry name" value="Glyco_transf_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02095">
        <property type="entry name" value="glgA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0320">Glycogen biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_transf_5" evidence="10">
        <location>
            <begin position="2"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="9">
        <location>
            <begin position="285"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>ADP-alpha-D-glucose</name>
            <dbReference type="ChEBI" id="CHEBI:57498"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023056"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="479" mass="50803" checksum="90B53EBCC4CB78EB" modified="2018-04-25" version="1">MRVLSVASEIYPLIKTGGLADVAGALPPAMARIGIEMRTLVPGYPAVMARLGETRIVHDLPPLVGVQARLIEASVEGLDLYVLDAPELFEREGGIYLDPTGKDWGDNWRRFAAFSRAAAEIARGVLPDFKPDLVHAHDWQAALAPVYLRYYGIPTPTVLTIHNLAFQGWYPAEIFWAIELPWAAFSLDGVEYFGGVGYLKGGLVAASAITTVSPTYAAEIRTPAEGMALDGLLRGRTAALHGIVNGIDADVWDPASDPTLAGHFSAQDPAGRAVNRAAVEEAFGLEPGEGPIFCVISRLTGQKGMDLVVETAHDLVTAGGRLAVLGSGEGWIEGAVLGLSGTHPGRIGVRIGYDEPLAHRMQAGCDAILIPSRFEPCGLTQLYGLRYGCVPIVARVGGLADTVIDANVAALNAGVATGLQFSPVDADALRAAVLKAIDLFGTPHWAAMQRAGMMSDVSWDRSATLYADLYRSLAPDVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW9</accession>
    <name>A0A2M9PGW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000013">
        <property type="protein sequence ID" value="PJN96798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014825463" evidence="2">
        <location>
            <begin position="23"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="33"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="338" mass="35762" checksum="F7FCB1E43E93F179" modified="2018-04-25" version="1">MKRLSLIAGAALLGLGATGASAATLDDVKARGTLKCGTNTGLAGFASPDAAGKWEGFDVAVCYAVAAAVLGDATKVEFTPTTGETRFTALASGEIDLLVRNSTWTFSRDNDLKLDFVGVNYYDGQGFIVSKDLGVASALELDGATVCIQTGTTTELNLADFFKQNNISYQPVPIQTEAEARQQFLGGACDAYTTDASGLASVRATYPDPANYIILPEIISKEPLGPVVRHGDNQWADIVRWTLFALFAGEEYGVTQANVEEMKTSSDNPDVRRLLGVEGDLGAQFGLDADWAARAIAANGNYGEIFAKNLGEGTASNIARGLNAQWYDGGLIYAPPFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX1</accession>
    <name>A0A2M9PGX1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Methionine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Methionyl-tRNA synthetase</fullName>
            <shortName evidence="9">MetRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">metG</name>
        <name evidence="13" type="ORF">CNY89_00870</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9">Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met)</text>
            <dbReference type="Rhea" id="RHEA:13481"/>
            <dbReference type="Rhea" id="RHEA-COMP:9667"/>
            <dbReference type="Rhea" id="RHEA-COMP:9698"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78530"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="9">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.10" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000028">
        <property type="protein sequence ID" value="PJN96724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004825">
        <property type="term" value="F:methionine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006431">
        <property type="term" value="P:methionyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07957">
        <property type="entry name" value="Anticodon_Ia_Met"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00814">
        <property type="entry name" value="MetRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00098">
        <property type="entry name" value="Met_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041872">
        <property type="entry name" value="Anticodon_Met"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023458">
        <property type="entry name" value="Met-tRNA_ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014758">
        <property type="entry name" value="Met-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015413">
        <property type="entry name" value="Methionyl/Leucyl_tRNA_Synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033911">
        <property type="entry name" value="MetRS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029038">
        <property type="entry name" value="MetRS_Zn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45765">
        <property type="entry name" value="PTHR45765"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19303">
        <property type="entry name" value="Anticodon_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09334">
        <property type="entry name" value="tRNA-synt_1g"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01041">
        <property type="entry name" value="TRNASYNTHMET"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57770">
        <property type="entry name" value="SSF57770"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00398">
        <property type="entry name" value="metG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA-synt_1g" evidence="11">
        <location>
            <begin position="4"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_3" evidence="12">
        <location>
            <begin position="414"/>
            <end position="563"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="11"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="9">
        <location>
            <begin position="339"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="156"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="159"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="342"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001234"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF09334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF19303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="563" mass="62507" checksum="06E806B20058C3D3" modified="2018-04-25" version="1">MARILITSALPYINGIKHLGNLVGSQLPSDVYARYLRARGHEVLFICATDEHGTPAELAAAKTGEPVAEYCARMWGVQKALADGFRLSFDHFGRSSSVENRELTQHFAAKLAEAGLIAEVAEKQVYSPADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDLEVRETRHLYLRQSALKGELKAWIQTKTDWPVLSTSIALKWLDDGEGLQDRGITRDLDWGVPVPGLPGKVFYVWFDAPIEYIAASAEWAHANGLGEEAWRRWWRSDEGAEDVRYVQFMGKDNVPFHTLSFPATIIGSGEPWKLVDYIKSFNYLNYEGGKFSTSQGRGVFMDQALEILPSDYWRWWLMANVPEGSDSNFTWEGFQAGVNKDLANVLGNFVSRVTKFARARFGETLPAGGGLGPAELAVITELTDRLRVYEGHLDAIELRKAAQELRAIWVAGNEYLQAAAPWTAIKTDPERAAVITRFAFNLIRFYAVLSRPFIPDASAAMLGALGLEETPWPEDVTSALEALGAGHGFEVPEVLFAKIDDARREELDARFAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ4</accession>
    <name>A0A2M9PGZ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000008">
        <property type="protein sequence ID" value="PJN96828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="23473" checksum="D404BAE0E2C4C22E" modified="2018-04-25" version="1" fragment="single">MDNARFFNAARRTIFKGGLRQSQVTTCEAVLTEAAAAGAGLREAAYMLATARWEPGEDMVPKEESLFYSSAARIRVVWPSRFPTDASAAPFVRNPRALANKVYNGRLGNRIDSDDGWTFRGRGLAHPTGRDNYGRAGAKLGLPLLEKPELALDLKIAARILVTGMMEGWFTGVTSAEAARTPGYEDDRRIINGTDKAAVIAAIAVQFEAALAAGGWGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH00</accession>
    <name>A0A2M9PH00_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000010">
        <property type="protein sequence ID" value="PJN96816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14525" checksum="EAA32DB908482602" modified="2018-04-25" version="1">MDGDARRRAGPHPWARVQSLGIAWPRRFLDAAISADDTLEQKRDDRRTRRVLSGIEAQTAVLEGGGAFWRKALDWGRRQRALTETEAGILVVASQIPAKLPSEAQSVKAMQALDKLRGRGFDLPLPGMKPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH07</accession>
    <name>A0A2M9PH07_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Cytochrome c domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00340</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000009">
        <property type="protein sequence ID" value="PJN96820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="322"/>
            <end position="500"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="500" mass="54799" checksum="636177FA8D53BAD9" modified="2018-04-25" version="1">MSLDLDRPTPVEAVMKRRRIWTWAIALILLALAIYWLVFANEYVVAHNDDGAHFLHGSIGSETTGLPSQVLLALPAMYPERTGGADLSRFGLLYAEGDDLPIGFSRRVIDGVERGWFNCALCHVGAYRMPGDDTRHLIVGAPSNNLKLQELIQFLVDVGRDPGFTADALIEAINSDEVPGHLNPFERLVYRMIAFPQIKAGLGLVGEQLAFIERQQPWGPGRVDTFNPYKAIQFGFPMTPEALDPVALDGASDYPSLWMQAPREGMNLHWDGNNPSVAERNLSAALGAGVTPVTVDRPAIARIEAWMRDLPAPAWPGPVDEALAQQGAEVFAEYCAACHGMGGPEGYDYSTDRHPALGQVVPLDEIGTDPGRWASYTPDFSAAQNTLYAGYPWRFSHFRKTDGYANHPLDGIWARSPYLHNGAVPTLADLLEPAEARPAVWWRGHEGLDLDRVGYQSRVPGPDLFRYDTSAPGNSNAGHDYGTALPAAEKAALVEYMKTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH12</accession>
    <name>A0A2M9PH12_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00225</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000006">
        <property type="protein sequence ID" value="PJN96837.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="11"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96837.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="30164" checksum="B591C33B4B4A779F" modified="2018-04-25" version="1">MLDAAPGETLLEVNNIEVIYNHVILVLKGVSLSVPKGGVTALLGGNGAGKTTTLKAISNLLRSERGEITKGSVLYRGQPVGALGPAELVRRGVIQVMEGRHCFEHLTVEENLLTGAYTRREGSAAVARDLEMVYAYFPRLRERRRSQAGYTSGGEQQMCAIGRALMSRPETVLLDEPSMGLAPQLVEEIFGIVKDLNEKEGVSFLLAEQNTNVALRYAHYGYILESGRIVMDGPAATLRENPDVKEFYLGMADHGRKSFRDVRSYRRRKRWLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH30</accession>
    <name>A0A2M9PH30_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014664021" evidence="1">
        <location>
            <begin position="19"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9572" checksum="4877B6E7948164A2" modified="2018-04-25" version="1">MTPALLLVALSVSTPYNAAVMSCQELADTAVSAYDAAVFGTDLATSDALLNAHGGPAMVDNLARQLREGSPMQRGNAGAALRFIEIFNERGC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P460</accession>
    <name>A0A2M9P460_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004897">
        <property type="protein sequence ID" value="PJN92322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7634" checksum="6484DEEEA4D1E1E8" modified="2018-04-25" version="1" fragment="single">EPPQGVLDGTTRLRAGDLVVVHDEIVDSLWEEDFTSHEDQQIVDDLRERFKLLGLDDSKVEEMVRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P471</accession>
    <name>A0A2M9P471_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23755</name>
        <name evidence="1" type="ORF">CNY89_30450</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004795">
        <property type="protein sequence ID" value="PJN92351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002625">
        <property type="protein sequence ID" value="PJN93099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4635" checksum="D947330347F8FF27" modified="2018-04-25" version="1" fragment="single">AVLAEKKVLATGTMADMLKVEHPWVHEYFHGPRARAAMAATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P486</accession>
    <name>A0A2M9P486_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase catalytic subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004849">
        <property type="protein sequence ID" value="PJN92339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3419" checksum="AD97F0F79AE4BA75" modified="2018-04-25" version="1" fragment="single">RPHASLGYKPPAPAAISWPAAPPPAMATKPTMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K3</accession>
    <name>A0A2M9P4K3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004419">
        <property type="protein sequence ID" value="PJN92472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6156" checksum="EDD6F247213B35A3" modified="2018-04-25" version="1" fragment="single">MLSTSSPYASGLDRNPANYVPLTPTTFLDRAAAVWPERTAVVHGAVRRNWAETAIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L2</accession>
    <name>A0A2M9P4L2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004385">
        <property type="protein sequence ID" value="PJN92484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="57"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8498" checksum="6327F8488B02850C" modified="2018-04-25" version="1" fragment="single">AARLAQRQGHFFPPRSSASQFAALEPLQPDEDAVTVDLTLTPEAQVAARLAQRQGHFFPPRSSASQFAALEPLQPDED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M2</accession>
    <name>A0A2M9P4M2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Adenosine deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004350">
        <property type="protein sequence ID" value="PJN92494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8827" checksum="74EDDB8C6FAFF624" modified="2018-04-25" version="1" fragment="single">EKGVDLTRLFDASGAYAWTDFADFLRVYEAACAVLVTPDDFIRSLAAEKGVDLTRLFDASGAYAWTDFADFLRVYEAACA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M7</accession>
    <name>A0A2M9P4M7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004347">
        <property type="protein sequence ID" value="PJN92496.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92496.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8035" checksum="50B8C4CF6F26D1AF" modified="2018-04-25" version="1" fragment="single">MGEEGPEVIEMGGSGFVTPAPQTRTYLDSLFDRTAGGGPVKRGGLYLVGEEGPEVIEMGGSGFVTPAPQTRTYLDSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M8</accession>
    <name>A0A2M9P4M8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sigma70_r2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004345">
        <property type="protein sequence ID" value="PJN92497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="1">
        <location>
            <begin position="5"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8783" checksum="8A8EE932C3D1420F" modified="2018-04-25" version="1" fragment="single">APPRLAEEAVQDTLVQIWRKAAQFRAGEGSALGWIFAILRNRCLNILAPPRLAEEAVQDTLVQIWRKAAQFRAGEGSALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y4</accession>
    <name>A0A2M9P4Y4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004057">
        <property type="protein sequence ID" value="PJN92589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9518" checksum="A0DC68119C2B146E" modified="2018-04-25" version="1" fragment="single">WNFVAVEERADWAEEGWSVPADPAHLRAALCGLGRARDPALAAVEETFLWGLFLWNFVAVEERADWAEEGWSVPADPAHLRAALCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P553</accession>
    <name>A0A2M9P553_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphopantetheine--protein transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003841">
        <property type="protein sequence ID" value="PJN92659.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92659.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8807" checksum="25CD1185ACCE64B7" modified="2018-04-25" version="1" fragment="single">MLDIRAMTQTVRLVQQMNKRPSVVLTFCPPSGAEVEQARKIVVQLGADLSPVDVHLRKAFSRAQQEGLTAQEYEPTGKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B3</accession>
    <name>A0A2M9P5B3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003626">
        <property type="protein sequence ID" value="PJN92741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="47"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="47"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10783" checksum="6F0B866A043F6AC2" modified="2018-04-25" version="1" fragment="single">DGVVIRDNTVAYDSNQIVNQIPLIDVSPSSRNVDIGENTVYGVDAATRTRPSSWSPTRPSCRPRSENVRGGDTILLKAGTYADLNLTHSSNRNYKFTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C0</accession>
    <name>A0A2M9P5C0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003692">
        <property type="protein sequence ID" value="PJN92715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="39" mass="4022" checksum="43212996FDBD2CE6" modified="2018-04-25" version="1" fragment="single">MTRTALEGFGKTLEATDEVVIEATGNSMAAARVLSPLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q4</accession>
    <name>A0A2M9P5Q4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003200">
        <property type="protein sequence ID" value="PJN92876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6480" checksum="BA2FBC3547AB7F02" modified="2018-04-25" version="1" fragment="single">QIHISALSADTLRPGQLIDVADAAEARRLLNMHPTALQPAGGAKALPAPANKADNRRKTKSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5U9</accession>
    <name>A0A2M9P5U9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">P-type conjugative transfer protein TrbG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_25620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TrbG/VirB9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003165">
        <property type="protein sequence ID" value="PJN92890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06911">
        <property type="entry name" value="VirB9_CagX_TrbG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2500">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010258">
        <property type="entry name" value="Conjugal_tfr_TrbG/VirB9/CagX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033645">
        <property type="entry name" value="VirB9/CagX/TrbG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038161">
        <property type="entry name" value="VirB9/CagX/TrbG_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03524">
        <property type="entry name" value="CagX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="87"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="91"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12595" checksum="BD0B774169596159" modified="2018-04-25" version="1" fragment="single">PIIPAEAARNYRYGLTGDSPPWRPISVFDDGRRVYVVFPRGIVQGEMPPIFVLGSDGEPQIVNSRIHQNILIVDRLFGAAELRRLSRPKPRATTATASPATARRGGRSPSSTMAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y5</accession>
    <name>A0A2M9P5Y5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20985</name>
        <name evidence="2" type="ORF">CNY89_25000</name>
        <name evidence="1" type="ORF">CNY89_25015</name>
    </gene>
    <organism evidence="1 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002996">
        <property type="protein sequence ID" value="PJN92956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002992">
        <property type="protein sequence ID" value="PJN92959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001943">
        <property type="protein sequence ID" value="PJN93414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7260" checksum="01AB228EC3A37FAB" modified="2018-04-25" version="1" fragment="single">EWVMERQVVKTDKDSGIVNDANRYAIETVGNPAYPLELFQRVITVSLETMKIVRGLPKLDLPDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y9</accession>
    <name>A0A2M9P5Y9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22595</name>
        <name evidence="1" type="ORF">CNY89_25305</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003085">
        <property type="protein sequence ID" value="PJN92928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002328">
        <property type="protein sequence ID" value="PJN93224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6436" checksum="39227A7EA80265A0" modified="2018-04-25" version="1">MTITCLDGQRDWTAIKASIPEEYFGLGNKQLAATHTAELQKGTGYEDALAYCRDVGAIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P674</accession>
    <name>A0A2M9P674_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24515</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002844">
        <property type="protein sequence ID" value="PJN93019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14174" checksum="DC42C33EA0B1A1E6" modified="2018-04-25" version="1" fragment="single">VIGSNNSAHDICAALWEAGADVTMLQRSSTHIVKSDSLMEIGLGGLYSEQAVANGVTTRKADLIFASLPYKIMHEWQIPLYEQMKERDAAFYQALEDRGFMLDWGADGSGLFMKYLRRGSGYYIDVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P691</accession>
    <name>A0A2M9P691_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002816">
        <property type="protein sequence ID" value="PJN93030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="30"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01381"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="30" mass="3168" checksum="65505C3BED018247" modified="2018-04-25" version="1" fragment="single">MAAARTLIGLQQAELAAAANISVPTLRRME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G4</accession>
    <name>A0A2M9P6G4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002545">
        <property type="protein sequence ID" value="PJN93123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9021" checksum="DC743ED247924C5E" modified="2018-04-25" version="1" fragment="single">LSDKYEGMRNSQNGWSIQEAGMAQLDDIVGSVMDYLKTPRPGASMPRASGLFAGSRTWRARSPGRGRGLRARLHKAFTPVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J5</accession>
    <name>A0A2M9P6J5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase_M78 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002446">
        <property type="protein sequence ID" value="PJN93162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="2">
        <location>
            <begin position="5"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="47"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8669" checksum="B7B34651748CBFEA" modified="2018-04-25" version="1" fragment="single">ATVCYDGYAAFVIYNNTHAPVRQASNIAHELAHIVLGHPPLPLIKADGRAPTSRSLKTRPAGSARRSWYRRRRRFTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P7</accession>
    <name>A0A2M9P6P7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_22605</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002333">
        <property type="protein sequence ID" value="PJN93222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="15565" checksum="E1521AAB731ADBEE" modified="2018-04-25" version="1" fragment="single">MELEVGGLTGAAWGEKSAERLVQRNGYRRPDVGDPGGLGGTAHPEVAAGSYFPGFLEPRRMAEKALTAVIQEAYIQGVSTRSVDDLVKALGMSGISKSQVSRLCAEIDERVTGECPIFCVRVCRSILRGKDSVDHGEEDRRRGSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P700</accession>
    <name>A0A2M9P700_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002116">
        <property type="protein sequence ID" value="PJN93313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8925" checksum="DAB409DB971A9DDA" modified="2018-04-25" version="1" fragment="single">LPASLKMVNGTDTAMLDLCERYYDDHLYQRLKKHCDEAGQSDMKRGYADCALPVVLEHNAPNNAIPLLWAETTGRHGPPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P735</accession>
    <name>A0A2M9P735_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002012">
        <property type="protein sequence ID" value="PJN93374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7704" checksum="C43A905408B6376D" modified="2018-04-25" version="1" fragment="single">DALLSPWKDMSPDHDLKSYLTAKINALYGHPRIGRYKAVWNETSAAAQAIFQAMADRRKYPLLSRRQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P755</accession>
    <name>A0A2M9P755_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF4411 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001993">
        <property type="protein sequence ID" value="PJN93381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8277" checksum="57C366AAE4B0F95A" modified="2018-04-25" version="1" fragment="single">FDHLIEGSRMLASIEVLHELKKKDDDVYGWAKDRKESLFVEIDDGVQAEIVRIMQTYPKLVDTGKGKSGAIRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N0</accession>
    <name>A0A2M9P7N0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleoside-diphosphate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19895</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001712">
        <property type="protein sequence ID" value="PJN93564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070063">
        <property type="term" value="F:RNA polymerase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029462">
        <property type="entry name" value="Rnk_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023459">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30437">
        <property type="entry name" value="PTHR30437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14760">
        <property type="entry name" value="Rnk_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Rnk_N" evidence="2">
        <location>
            <begin position="24"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="GreA_GreB" evidence="1">
        <location>
            <begin position="61"/>
            <end position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14760"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16691" checksum="FB5EDC49342F67D0" modified="2018-04-25" version="1">MPTITASAGASATVPGIVLETGQADRLEAVADAAMRRLPDLARRLIDEIARAQLVAMEDLPPDVVALGREITYRDEITHQEQSVVLVMPEEADIAQGRASVLTPIGVALIGLRLGASFTWETRNRESRWLTVTQVDQILKPKASPRRRRASVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P831</accession>
    <name>A0A2M9P831_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Septum formation initiator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18960</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001535">
        <property type="protein sequence ID" value="PJN93706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007060">
        <property type="entry name" value="FtsL/DivIC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04977">
        <property type="entry name" value="DivIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="15"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="45"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11592" checksum="E9179C43A6487804" modified="2018-04-25" version="1">MAGFPGDIDGRRGGWGGAVFGAVVLALMAYLTFAALQGEHGLFRLFQIEAQEKRLQLELDKLVAEREAIANKTHRLSSATLDLELLDEQARRTLGLGRPDEMLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B8</accession>
    <name>A0A2M9P8B8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001456">
        <property type="protein sequence ID" value="PJN93785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014158">
        <property type="entry name" value="T4SS_VirB5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023220">
        <property type="entry name" value="T4SS_VirB5-domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07996">
        <property type="entry name" value="T4SS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14081" checksum="DBCD640F2AC463AB" modified="2018-04-25" version="1">MSGSPILGNTARLAASIDRLKGNYQLDLLGPYASSDLAQNRALATLGGASLAAMATGEDSYLRANAAMARVNRLVPQIDANADVKAAIDFNTRVQIEQMQVMNELLRVMSVQANAAGAQALFTTASRWPRVSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C5</accession>
    <name>A0A2M9P8C5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Translation initiation factor IF-2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_18355</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001446">
        <property type="protein sequence ID" value="PJN93796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006847">
        <property type="entry name" value="IF2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="PTHR43381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04760">
        <property type="entry name" value="IF2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51722">
        <property type="entry name" value="G_TR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="6">
        <location>
            <begin position="142"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="5">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022540"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="255" mass="27671" checksum="163464EC4B926A9F" modified="2018-04-25" version="1" fragment="single">EEKKTTRAKGDDDRRRSGKLTITNAGDQEGRQRSMAAMKRRQERDKRRMSGTTERERVVREVQVPDAITVQELANRMAERVAAVVKTLMQNGIMATQNQTIDADTAALIVEDFGHKVVRRSDSDVEDVIVQASGEDAGNLQPRPPVVTIMGHVDHGKTSLLDAIRKTSVVSGEAGGITQHIGAYQVTTETGQVITFLDTPGHAAFTSMRARGAHVTDIVVLVVAADDSVMPQTIEAINHARAAGVPMIVAINKMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F8</accession>
    <name>A0A2M9P8F8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UPF0056 membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_18335</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the UPF0056 (MarC) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001443">
        <property type="protein sequence ID" value="PJN93800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002771">
        <property type="entry name" value="Multi_antbiot-R_MarC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33508">
        <property type="entry name" value="PTHR33508"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01914">
        <property type="entry name" value="MarC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00427">
        <property type="entry name" value="TIGR00427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="41"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="188"/>
            <end position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22049" checksum="D37BB0FF5ED75062" modified="2018-04-25" version="1">MIPDFAVTFFGALFAIMNPLVNLPLFLSLTAGYTPDEQRRAGLAVVFYSTIMCAAVALVGPQILAFFGITVNDFRVAGGLVLAGIALSMLNGGGNAAHEGGSGEKVGQPRENIAFYPLTFPMVVGPGTITTLVVFLREATTPEDKLIYAGVVGVILLMLAVVLYFAAAIGQRLSGTLRVIMSRLMGMILLAIAISMLVAGLKALMPGLAGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H7</accession>
    <name>A0A2M9P8H7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001405">
        <property type="protein sequence ID" value="PJN93846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6230" checksum="7FDE4C68364C0523" modified="2018-04-25" version="1" fragment="single">MPRILILLVVAVAVVAGLYWGMGRQEAVQTTTSPAVTPPVETPAQAAETPAEQAVQDAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J1</accession>
    <name>A0A2M9P8J1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TraG-D_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001411">
        <property type="protein sequence ID" value="PJN93839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032689">
        <property type="entry name" value="TraG-D_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12696">
        <property type="entry name" value="TraG-D_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TraG-D_C" evidence="1">
        <location>
            <begin position="10"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="21422" checksum="15B52C863B5240A2" modified="2018-04-25" version="1" fragment="single">RRRRPERATLFVLDEAAQLGTLEELRTSLTLLRGYGVQTWSFWQDLSQIRMLYPHDWQTMINNCAVIQSFGPNTQRAAADATELMGFMTASEFLALERDEMLLQIAGDEAVVARRPNYLTDPIFADRFDANPMFDATVDPVPVKTLTRLYLRPARQVISAPETPDGRLGPAAENPVDRALAEIIEREAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K8</accession>
    <name>A0A2M9P8K8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SIS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001384">
        <property type="protein sequence ID" value="PJN93875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097367">
        <property type="term" value="F:carbohydrate derivative binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901135">
        <property type="term" value="P:carbohydrate derivative metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001347">
        <property type="entry name" value="SIS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046348">
        <property type="entry name" value="SIS_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53697">
        <property type="entry name" value="SSF53697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51464">
        <property type="entry name" value="SIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SIS" evidence="1">
        <location>
            <begin position="27"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="220"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="220" mass="22836" checksum="F79826352E52C883" modified="2018-04-25" version="1" fragment="single">MTPIFTKKLDGLDGTVRLLEIFDAGSIASGLAKGRSYHAIAVGSGGSAIAARFLARCRDTLGLGPTSVETPMDVVLGIHDISGTDVWLFSAGADNADVVAAATAARQRRCRRLHIVTRGPSGTAAQVVADAGGHVHAVPVATTRDGYLATHSMIATIGSLLIASDAVAYDACGQGELVHALLGRLREVRDSAGRSTTAERFASLGHRDTVMLLADPQLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M8</accession>
    <name>A0A2M9P8M8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17825</name>
        <name evidence="2" type="ORF">CNY89_17850</name>
        <name evidence="1" type="ORF">CNY89_30350</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004762">
        <property type="protein sequence ID" value="PJN92362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001379">
        <property type="protein sequence ID" value="PJN93880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001377">
        <property type="protein sequence ID" value="PJN93883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5167" checksum="29275D5542F204ED" modified="2018-04-25" version="1" fragment="single">AAITRLVGAILLEQNDEWAVQRSRYMTLETIAPIQDDPVIGLPAMAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P902</accession>
    <name>A0A2M9P902_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molybdenum-dependent transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16990</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001265">
        <property type="protein sequence ID" value="PJN94017.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94017.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3671" checksum="5DFC575C34BA43F6" modified="2018-04-25" version="1" fragment="single">MSVRPELSLTAPHAAPLGAERVRLLEAVGREGSIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P908</accession>
    <name>A0A2M9P908_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IMP dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001279">
        <property type="protein sequence ID" value="PJN93999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018667">
        <property type="entry name" value="DUF2126"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09899">
        <property type="entry name" value="DUF2126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2126" evidence="1">
        <location>
            <begin position="1"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="35243" checksum="47C4CF7E50FC7410" modified="2018-04-25" version="1" fragment="single">YEEARQCRLGADKFMIDGKHAGTGGGNHVVVGGATTLDSPFLRRPDLLKSIVLHWQRHPSISYLFSGLFIGPTSQAPRIDEARHDVLYELEMALAQIPAPGQGIEPLPWLVDRLLRNMLTDVTGNTHRAEICIDKLYSPDGPTGRLGLVEFRGFEMPPDARMSLAQQLMIRALIARLWADPVQGELIRWGTTLHDRFMLQHFVWEDFLDVLRDLRDHGFEMRPEWFVAQAEFRFPFCGEVEYEGVNLELRQALEPWHVLGETGAIGGTVRYTDSSVERLQVKLTTLDPQRYAVACNGRLLPLQATGTSGVSVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P919</accession>
    <name>A0A2M9P919_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">30S ribosomal protein S17</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rpsQ</name>
        <name evidence="4" type="ORF">CNY89_16910</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 30S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the universal ribosomal protein uS17 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001254">
        <property type="protein sequence ID" value="PJN94033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01345_B">
        <property type="entry name" value="Ribosomal_S17_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019984">
        <property type="entry name" value="Ribosomal_S17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000266">
        <property type="entry name" value="Ribosomal_S17/S11"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10744">
        <property type="entry name" value="PTHR10744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00366">
        <property type="entry name" value="Ribosomal_S17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00973">
        <property type="entry name" value="RIBOSOMALS17"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03635">
        <property type="entry name" value="uS17_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 3" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9262" checksum="B4FB7940786B7D1C" modified="2018-04-25" version="1">MPKRILQGTVTSDKNEQTITVLVERRFTHPVLKKTVRKSKKYRAHDADNRFKVGDQVRIRECAPISKTKRWEVLADAAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P968</accession>
    <name>A0A2M9P968_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001229">
        <property type="protein sequence ID" value="PJN94062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014689749" evidence="1">
        <location>
            <begin position="23"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="223" mass="23818" checksum="1D1C5949F3B9E653" modified="2018-04-25" version="1" fragment="single">MRRLMSTTLLAGLAFAAAPAGAQTLDELIAGAKAEGSLTTIALPHDWCGYGGVIESFKAKYPFLTVNELNPDAGSADELEAIRANKDNKGPQAPDVIDVGFSFGPQAKSEGLLLPYKVSTWDTIPDNVKDADGYWYGDYYGVLSFAVNKDLVEDNPLDWPDLLKPEFANSVALAGDPRASNQAILGVYAAGAELRRHLLGVEAEIARIGAHVARDEALVGEDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A2</accession>
    <name>A0A2M9P9A2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="15">Zinc metalloprotease HtpX</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_16465</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M48B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001194">
        <property type="protein sequence ID" value="PJN94111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00188">
        <property type="entry name" value="Pept_M48_protease_HtpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022919">
        <property type="entry name" value="Pept_M48_protease_HtpX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001915">
        <property type="entry name" value="Peptidase_M48"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01435">
        <property type="entry name" value="Peptidase_M48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="12 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11 15" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="5 15" id="KW-0645">Protease</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="30"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="141"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="173"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M48" evidence="14">
        <location>
            <begin position="66"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF01435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN94111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="31792" checksum="21C6ADB0926031FC" modified="2018-04-25" version="1" fragment="single">MNYFRTMLLLAALTALFMGVGYMIGGTSGMLIAFLFAIGTNAFAWWNSDKAVLRMHHAEPVTRASAPELWDMIATLSKNAGLPMPKVFIIREDQPNAFATGRNPENAAVAATTGILRLLTREELAGVMAHELAHIKNRDTLIMTVAATVAGAISMLAQFGFLFGGGDRERNPLGPFGVILAVIFAPMAAMLIQMTISRTREYSADKLGAEIARDPLGLASALRKISVAAGRIVMPTAEANPTSAPLFIVNPLSNSRMDNLFSTHPNPENRIRALEAMAPAFRGAAPVAPSASLRQST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V6</accession>
    <name>A0A2M9P9V6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Arc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001061">
        <property type="protein sequence ID" value="PJN94301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005569">
        <property type="entry name" value="Arc_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013321">
        <property type="entry name" value="Arc_rbn_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03869">
        <property type="entry name" value="Arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arc" evidence="1">
        <location>
            <begin position="4"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9410" checksum="0F4DD76FACC6A6DD" modified="2018-04-25" version="1">MSNRDTDPFLLRLPKGWKDRIKEAAARNRRTMTSEILHQLEQNFNETAGAEFGDRTPAARHASAARKGVASITHGIGAAIDDSHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W4</accession>
    <name>A0A2M9P9W4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001050">
        <property type="protein sequence ID" value="PJN94319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8562" checksum="6FDCF46006C43D06" modified="2018-04-25" version="1">MIGITSPSVQRRYSLATVCRLWGVSRATLYRQRSAMAGNEPCPPGRRGPRGARSDADLLAAIREVIEGSPSTGEGYRKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y1</accession>
    <name>A0A2M9P9Y1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Co-chaperone YbbN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001037">
        <property type="protein sequence ID" value="PJN94340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6712" checksum="45F440247537B69F" modified="2018-04-25" version="1" fragment="single">QVAGGESEAAIETLLELFRRDREWNEGAARTQLFKLFDSLGPKSEAAVKGRRRLSSMIFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA67</accession>
    <name>A0A2M9PA67_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Cytochrome-c oxidase</fullName>
            <ecNumber evidence="5">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">ccoN</name>
        <name evidence="14" type="ORF">CNY89_14585</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Cu(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29036"/>
        </cofactor>
        <text evidence="10">Binds 1 copper ion per subunit, denoted as copper B.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="10">Binds 2 heme groups per subunit, denoted as high- and low-spin.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 11">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000987">
        <property type="protein sequence ID" value="PJN94426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045278">
        <property type="term" value="C:plasma membrane respiratory chain complex IV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01661">
        <property type="entry name" value="cbb3_Oxidase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004677">
        <property type="entry name" value="Cyt_c_oxidase_cbb3_su1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422:SF29">
        <property type="entry name" value="PTHR10422:SF29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00780">
        <property type="entry name" value="ccoN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0249">Electron transport</keyword>
    <keyword evidence="10 11" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="8 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="6 11 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="79"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="113"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="157"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="190"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="220"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="259"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="302"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="331"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="387"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="13">
        <location>
            <begin position="1"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="160"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="210"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="211"/>
        </location>
        <ligand>
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
            <label>B</label>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="416"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR604677-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="416" mass="47060" checksum="2A88C231858015AF" modified="2018-04-25" version="1" fragment="single">WTSFGRLRPLHTSAVIFAFGGNALIATSFYVVQRTCATRLWGGNAAWFVFWGYNLFIVLAATGYILGSTQSKEYAEPEWYVDLWLAIVWITYLAIFLGTLVKRKEPHIYVANWFYLGFIVTVAMLHVVNNVAIPISLWSSLSVPAWPGVQGAMVQWWYGHNAVGFFLTAGFLGMMYYFIPKQADRPVYSYKLSIIHFWALIFLYIWAGPHHLHYTALPDWAQVLGMVMSIILWMPSWGGMINGLMTLQGAWDKLRTDPILRMLVISVGFYGMSTFEGPMMAIRSVNSLSHYTDWTIGHVHSGALGWNGMITFGALYYLTPRLWHRERLYSISLVAWHFWLATIGIVLYASAMWVAGITQGLMWREVDAQGFLVNSFADSVAAMHPMYVIRALGGVLYLTGGLIMIYNLYKTIVGAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA2</accession>
    <name>A0A2M9PAA2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GIY-YIG domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000954">
        <property type="protein sequence ID" value="PJN94473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GIY-YIG" evidence="1">
        <location>
            <begin position="12"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="13373" checksum="997E71A338DEFDAE" modified="2018-04-25" version="1" fragment="single">MGEIDWLLPRENTPGIYLWRIGEETYVGKATSLRSRLREYRSNTRRALAGGVYRKSNPDGWRRVHLELAKAVQAGRPISVEVLEFCAKEQLNERERYWLGIFGSCPRWWCSSTVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA3</accession>
    <name>A0A2M9PAA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heavy metal translocating P-type ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14315</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000956">
        <property type="protein sequence ID" value="PJN94470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="148"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="188"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="225"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="253"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="406"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="4">
        <location>
            <begin position="62"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="2">
        <location>
            <begin position="8"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="424" mass="45031" checksum="8592CCA3650240DC" modified="2018-04-25" version="1" fragment="single">MAAQRCRRPRAALRRRLRARPPTPRQGTRPTERADVTLVQPVDQASLVRAIEDAGYEVPGRAITLAIDGMTCASCVARVEKALLAHPGVTSATVNLATERASLSTSGTVADRDLVAAVASAGYEARTVNGNEDDEAHASRKQAEQAALGRDVAIAAILTLPVFVLEMGSHLIPAVHDLVMNTVGMRESWYLQFGLTTVVLFWPGLRFYRIGLPALIKGAPDMNSLVAVGTLAAWTYSVVATFAPQLLPAGTVNVYFEAAAVIVTLILLGRYLEARAKGRTSEAIKRLVGLQPKTARVRRDGKVVEVALVDVVTGDLVDVRPGERIAVDGEVVEGASFVDEAMITGEPVPVEKQAGATVLGGTVNQTGALTFRATAVGADTMLAQIIRMVEEAQGSKLPIQALVDRVTLWFVPAVMAAAALTFLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC8</accession>
    <name>A0A2M9PAC8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyridoxal kinase</fullName>
            <ecNumber evidence="1">2.7.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.35" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000955">
        <property type="protein sequence ID" value="PJN94471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008478">
        <property type="term" value="F:pyridoxal kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009443">
        <property type="term" value="P:pyridoxal 5'-phosphate salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004625">
        <property type="entry name" value="PyrdxlKinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10534">
        <property type="entry name" value="PTHR10534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00687">
        <property type="entry name" value="pyridox_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012104"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15034" checksum="6A7F7760A2704D2B" modified="2018-04-25" version="1" fragment="single">MPPTIISIQSQVVHGHVGNSAAAFPMRMLGIEVAEVPTTLLSNHPHYPTTRGRVLEASLVADLLRGVEERGLIEAGAIVLSGYLGSAAIAEEVAAFVFRARRTNPRLIYLCDPVMGDSDLGFFVPADLQAAFRERLVPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI9</accession>
    <name>A0A2M9PAI9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MucR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000917">
        <property type="protein sequence ID" value="PJN94544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10977" checksum="F430AACABAE7C6FF" modified="2018-04-25" version="1" fragment="single">MLNATAPAVKSALTSEIVSAYASNATVEGTVVQDLIGSVFAKLSELAVDGDAVPETLTPAVPIRRSVTDDYIVCLEDGKKFKMLKRHLMTTYGLTPEDYRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM1</accession>
    <name>A0A2M9PAM1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Alginate_lyase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000899">
        <property type="protein sequence ID" value="PJN94574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008397">
        <property type="entry name" value="Alginate_lyase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008929">
        <property type="entry name" value="Chondroitin_lyas"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05426">
        <property type="entry name" value="Alginate_lyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48230">
        <property type="entry name" value="SSF48230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Alginate_lyase" evidence="1">
        <location>
            <begin position="54"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="353" mass="38456" checksum="95A8044C7C4A5011" modified="2018-04-25" version="1" fragment="single">AGVIPPQAEIDASRAYKKGSGSAVDCASMRRREAGNRFLKAFLDDVIAASDKAPACAAGMMRTWAEADAMREIGTEGSENTSRAIGMFTLSGLSATYLVAPEVRAAAGPEGDREILAWFRRLSARVEEDIAAKRARKDEDNIQYWQGFAVLPTALMTADPALLKQSRATFHAAMREVTEKQRDPQDDGFLPLELERGDKALNYQAYAAHPIVGMATLSRSYGCDFLDTDWKRSQFVSLMSRTLEGNLDPEIFAEAAVRLGKRKKEVEQLRSYTARHAPDLMYLVDRMDPALFDRIDARVAEATGKPRPVFPASRGADGANDRMGGSYARLADRAGALSEKPAPGSLAEVCKGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN5</accession>
    <name>A0A2M9PAN5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13565</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000883">
        <property type="protein sequence ID" value="PJN94598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd16325">
        <property type="entry name" value="LolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029046">
        <property type="entry name" value="LolA/LolB/LppX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004564">
        <property type="entry name" value="OM_lipoprot_carrier_LolA-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35869">
        <property type="entry name" value="PTHR35869"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03548">
        <property type="entry name" value="LolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89392">
        <property type="entry name" value="SSF89392"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014618241" evidence="2">
        <location>
            <begin position="21"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="228" mass="24373" checksum="1E40861A713A3B87" modified="2018-04-25" version="1" fragment="single">MNRRALLLALAALPAWPAFAQSVDVSGIDRYLRGLRTAQGSFRQTNPNGSVQTGKLWLSRPGRVRFEYDAPKGAMVIADGTNVAVFDPKSTRVSSRYPLGRTPLALLLDANLTLAQPGLVRGAVRTAQGVDITVVDPRSPNEGRLVMTFSENPVALRGWTTATKAGQRTTVALTGLKTGGAVDRGLFNIEMAEIKETWSCLAPKASARASRYSAAAGLPERIIGSTRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU2</accession>
    <name>A0A2M9PAU2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Metal ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_13205</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000845">
        <property type="protein sequence ID" value="PJN94656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="98"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="218"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="1"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="277"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="310"/>
            <end position="317"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="450" mass="49979" checksum="610B0C7DBDA5C67D" modified="2018-04-25" version="1" fragment="single">LAYGVLRFAGVAFAQLRDGVFAPVGQNALRHIALETFRHIHALSLRYHLTRRTGGLSRIIERGVKGTDFLLRFLLFSIVPLILELVLVGIVLWLAFDVWYLVVTAVTIGLYVWFTVKVTEWRVRIRQVMNDRDTEANQKAVDSLLNYETVKYFSAEEREAQRYDHSMEGYAEAATKTAISLAWLNAGQTFIITAGLVIVMVMAAQGVIAGTLTVGDFVMVNAYMIQITLPLGFLGTVYREIRQALIDMDSMFDLLEQPVEIADRPGARALEVTEGRVEFRDVRFAYDPERQILKGVSFAIEPGETVAVVGPSGSGKSTLGRLLFRFYDPTGGAVLIDGQDLRDVTQDSLRADIGMIPQDTVLFNDTIYYNIAYGRPEASRAEVEAAAEAASIHDFIMSLPLGYRTQVGERGLKLSGGEKQRVGIARTLLKNPPSHPIAWLGCFSHVAWGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW5</accession>
    <name>A0A2M9PAW5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutamate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000837">
        <property type="protein sequence ID" value="PJN94676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8205" checksum="4EFA83F8AD733F5E" modified="2018-04-25" version="1" fragment="single">AGVPLGLSDKFKSEYVRGAGELELVRSGLDDTMRAAYQSMREIWRSRPDVEDLRIAAYLVSIGRVAASYRSKGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB04</accession>
    <name>A0A2M9PB04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">S-(Hydroxymethyl)glutathione dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12915</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000819">
        <property type="protein sequence ID" value="PJN94705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_N" evidence="2">
        <location>
            <begin position="28"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="17534" checksum="2E54FB6C3BB2C853" modified="2018-04-25" version="1" fragment="single">MRTRAAVAVAAGKPLEIMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGLFPAILGHEGAGVVVEVGPGVTSVKPGDHVIPLYTPECRQCPSCLSQKTNLCTSIRATQGQGLMPDGTSRFSMLDGTPILHYMGCSTFSNYTVLPEIAVAKVREDAPFDKIC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB14</accession>
    <name>A0A2M9PB14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000805">
        <property type="protein sequence ID" value="PJN94730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="25730" checksum="73A5F59E7609B5A3" modified="2018-04-25" version="1">MAVPEHAATTAYVAAMTTAPDATRRGHINALIAGLDADGDWTGLDWIVCLAAHDVEGGASQAGRLNMRNPAKSLAAVNSPTFSSLGVVGDGATSYLTASEAANASGNSYSQNSASMGVWCNQMSATAGNVSHAGNPNSSTRQRLSPGTTTGSHRIQDATSLTYDEGGSRVGGRILTRTGATTKILYKNGSAVASDLVTTSSVMQGEHMTVLRAGTGYCDDRLSFWFTGGGLSAAAVARVHARVATFLTAIGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB25</accession>
    <name>A0A2M9PB25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000796">
        <property type="protein sequence ID" value="PJN94743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="18143" checksum="E0D92A8A3696687D" modified="2018-04-25" version="1">MAALAWVLGIGIFAALLLRYPRGMGILVATVVGLGSLIGGGIWGYSTIQDETAGEPARQIETLISYDPSKCSVEYPLLIGFVNRTDQSITKMSFGVSGFRKGYSQPLYQTPYASYSSDFIIEPGEGSGFCWRIPEKAYGISDATLQQHWPETLTWMVTTRLPEFQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB40</accession>
    <name>A0A2M9PB40_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000803">
        <property type="protein sequence ID" value="PJN94735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025427">
        <property type="entry name" value="DUF4160"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13711">
        <property type="entry name" value="DUF4160"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7325" checksum="646D1A95C02E6EE5" modified="2018-04-25" version="1">MQGDPREPPHVHVTAGDQIAKFWLDPVELASSKRLRAHEINELRNLVERHQAAFLEAWNAHFGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB54</accession>
    <name>A0A2M9PB54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000790">
        <property type="protein sequence ID" value="PJN94755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10710" checksum="29CAB658154A69CF" modified="2018-04-25" version="1" fragment="single">MALNVVMGTQHRLVLDFVGGAGFVGIAVALMGRSHPFGVILAAILFGMLYQGGAELAFEMPAITREMIVVIQALVILFTGALENLVRQPVERLFARRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB86</accession>
    <name>A0A2M9PB86_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Sigma-54 factor interaction domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_12295</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000761">
        <property type="protein sequence ID" value="PJN94806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14532">
        <property type="entry name" value="Sigma54_activ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="6">
        <location>
            <begin position="1"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="270" mass="29792" checksum="D00EBE50F4604494" modified="2018-04-25" version="1" fragment="single">RASRRRGRDPRLGAGAFPRGRARPRLVRRHGALETMLFGSPDWPEKPLVDQAEGGTLVLEDVEALSLSAQARLLETLNATDPTAASKRLHNIRIVSISTRLGLSAPGEGVMRDDLYFRLAALVVEVPPLRARGEDILMLFSHFTVQYAEEYGCEPPTLGAGDAANLVQAPWPGNIRQLMNLAERAVLQARRGENNISALLIDDGFQAPVMSLDAEKPLKDHVDAFEKMLIDHALRRNQGSVSAVMAELALPRRTLNEKMAKYGLSRQDYL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG3</accession>
    <name>A0A2M9PBG3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphate transport system regulatory protein PhoU</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000727">
        <property type="protein sequence ID" value="PJN94862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4316" checksum="327CC432C2258716" modified="2018-04-25" version="1" fragment="single">GDHTTHISEMIYYIVKGERLTEDRRKGEPSGIDLIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ8</accession>
    <name>A0A2M9PBZ8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MaoC-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000621">
        <property type="protein sequence ID" value="PJN95071.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002539">
        <property type="entry name" value="MaoC-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016790">
        <property type="entry name" value="Thiol_ester_hydratase_Rv0216"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01575">
        <property type="entry name" value="MaoC_dehydratas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021494">
        <property type="entry name" value="Rv0216_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MaoC-like" evidence="1">
        <location>
            <begin position="14"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95071.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="310" mass="33490" checksum="94D7B441CF5D328B" modified="2018-04-25" version="1" fragment="single">MSKTFSGNFFEDYRIGQTIAHAVPRTVTEGDRALYTALYPTRFALYSSDEFARASGLPRSPIEDLAAFHVVFGKTVPNVSLNAVANLGYAEGRFLAPVYPGDTITSTSEVIGLKENSNRQSGVVYVRSTGRNQHGAPVLTYARWVMVRKRDPEAAVGEAVVPKLAPAVAAADLVLPEGLDFTGYDFGLAGEAHRWGDYAVGEKIDHVDRVTIEEAEHMLATRLWQNTSKVHFDATARPDGRRLIYGGHVISMARALSFNGLANAAAVMAINAGAHANPCFAGDTISAWSEVLDKADTISAWSEVLDKAET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC55</accession>
    <name>A0A2M9PC55_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidylprolyl isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000602">
        <property type="protein sequence ID" value="PJN95109.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95109.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13329" checksum="A13FB5D758637426" modified="2018-04-25" version="1" fragment="single">MLNFFRNRKSGFFVWAILILLMVGLTGLGVSTAGNGSGEEVITIGDTAVESDQVARAMKQELDAISNQIGRQLPMSEARQYGIDRMVLTRLASDAALDDEATRRGLSVGDTAVHAMVVATPAFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC8</accession>
    <name>A0A2M9PCC8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000560">
        <property type="protein sequence ID" value="PJN95200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6907" checksum="95383523553E15EB" modified="2018-04-25" version="1" fragment="single">MSRGLSGVLAVVGACLVWGLSGIYFKALAMVPPRSSAGPTTTTPRAGRPTTPVEEARMKYQSQKVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF2</accession>
    <name>A0A2M9PCF2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Chromate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_09910</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000561">
        <property type="protein sequence ID" value="PJN95198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015109">
        <property type="term" value="F:chromate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014047">
        <property type="entry name" value="Chr_Tranpt_l_chain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003370">
        <property type="entry name" value="Chromate_transpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02417">
        <property type="entry name" value="Chromate_transp"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004810">
        <property type="entry name" value="ChrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00937">
        <property type="entry name" value="2A51"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="112"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="147"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="223"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="257"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="328"/>
            <end position="352"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="364"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="385" mass="40331" checksum="17EA60B6C452D4C1" modified="2018-04-25" version="1">MSANRRAYPTLAEATRVWLRIALLSFGGPAGQIAVMHRILVEEKRWLGDGRFLHALNFCMLLPGPEAQQLATYIGWLMHGARGGLVAGLLFILPGLLAIMALSWLYVLFGTVGFVAAAFFGLKAAVLAIVLQALIRIGSRTLRNAALRTVAAAAFVAIFVFGIPFPIIILCAGLIGLAGAHAGVTAFQIRSGHGAAGGPHVADAETLLGEELDALPPIARRDALRAGAFALVLWLVPVGLILLAAGPGNVFADIATFFSRMAVVTFGGAYAVLAYVAQQAVETYGWLAPGEMLDGLGMAETTPGPLIMVLQFVGFLAAYREAGWVSPLIAGSVGGLLATWVTFTPCFAWIFLGAPYIEGLRGNRSVAAALTVVSAAVVGWATPRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD20</accession>
    <name>A0A2M9PD20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Neutral zinc metallopeptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000448">
        <property type="protein sequence ID" value="PJN95445.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2010.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010428">
        <property type="entry name" value="Zincin_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038555">
        <property type="entry name" value="Zincin_1_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06262">
        <property type="entry name" value="Zincin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95445.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="15984" checksum="772A6082DD76A8F8" modified="2018-04-25" version="1">MTAPRDDALPDPDIAPSLAELERLAAEAYARLPGEVRTVCQGLAIRVEDFPTDEMLDDLGLEDPFELTGLYDGRALTERSVFDQPTRPDVVWLFRRPILEEWIERGDVGLARLVAHVLVHEIAHHLGWSDDDIRDVDDWTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE5</accession>
    <name>A0A2M9PDE5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF4089 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07865</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000408">
        <property type="protein sequence ID" value="PJN95543.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025148">
        <property type="entry name" value="AtzG-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13318">
        <property type="entry name" value="DUF4089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95543.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3499" checksum="8B443329A98F4915" modified="2018-04-25" version="1" fragment="single">MDWDAYITATSAAVGVPVAEAHRPGVARFLALAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL7</accession>
    <name>A0A2M9PDL7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">UTP--glucose-1-phosphate uridylyltransferase</fullName>
            <ecNumber evidence="3 5">2.7.7.9</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">UDP-glucose pyrophosphorylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">galU</name>
        <name evidence="7" type="ORF">CNY89_07535</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>alpha-D-glucose 1-phosphate + H(+) + UTP = diphosphate + UDP-alpha-D-glucose</text>
            <dbReference type="Rhea" id="RHEA:19889"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.7.7.9"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the UDPGP type 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.9" evidence="3 5"/>
    <dbReference type="EMBL" id="PHNO01000382">
        <property type="protein sequence ID" value="PJN95598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003983">
        <property type="term" value="F:UTP:glucose-1-phosphate uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006011">
        <property type="term" value="P:UDP-glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02541">
        <property type="entry name" value="UGPase_prokaryotic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005771">
        <property type="entry name" value="GalU_uridylyltTrfase_bac/arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005835">
        <property type="entry name" value="NTP_transferase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43197">
        <property type="entry name" value="PTHR43197"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00483">
        <property type="entry name" value="NTP_transferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01099">
        <property type="entry name" value="galU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NTP_transferase" evidence="6">
        <location>
            <begin position="12"/>
            <end position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012415"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU361259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="305" mass="32941" checksum="F4FDE7059B1AF1C9" modified="2018-04-25" version="1">MSKKVTKAVFPVAGFGTRFLPATKSVPKEILPLVDKPLIQYAIDEARAAGINEFIFVTSRGKSALEDYFDSNPELEAALREGKKTALLEKLHQTDMGSGAVAYVRQHERRGLGHAVWCARNLIGDEPFAVILPDDVIDSETPCLQQMVEAYSEFGGNMVATMEVPTANVSSYGILDVGSEAGPTMSVRGMVEKPKAADAPSNFAVIGRYILTPQVLLNLEQIEAGAGGEVQLTDAIAAEIAARDNVHAFRFKGRRFDCGSQTGYLQATVTFGLAREELRAEFMEFLQTIEGVSPASAPQRAVAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP8</accession>
    <name>A0A2M9PDP8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000350">
        <property type="protein sequence ID" value="PJN95675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036374">
        <property type="entry name" value="OxRdtase_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56524">
        <property type="entry name" value="SSF56524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014851339" evidence="1">
        <location>
            <begin position="21"/>
            <end position="177"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="18937" checksum="70745A4F19BF8737" modified="2018-04-25" version="1">MFPFRLAVIALLVTALPAFAQGPVMLTVTGAVEKPNRGPVDPDLDKLFVFNDVTFKRAREFDIDALAALPQVTVRADFPKGGPEATFTGPLLADLLAASGAEGRSVTIQAMDGYAVEASFAELASKGAVIALARDGKPMGIGSLGPAQLVFPRADRDDLAAMPDDWWIWQIFHVRVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT9</accession>
    <name>A0A2M9PDT9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">LysE family translocator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_06845</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000333">
        <property type="protein sequence ID" value="PJN95720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="44"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8277" checksum="B350AF2A67DC3271" modified="2018-04-25" version="1" fragment="single">MNTDILFALFVASFVNAALPGPCMIATMGRTLRGGWRKGALVSLGVLAADTLHIAAAIAALLGVLSLSPAALIAMKWAGIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV2</accession>
    <name>A0A2M9PDV2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_06935</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="3">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the sulfatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000340">
        <property type="protein sequence ID" value="PJN95702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024607">
        <property type="entry name" value="Sulfatase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00523">
        <property type="entry name" value="SULFATASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014864133" evidence="4">
        <location>
            <begin position="27"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="5">
        <location>
            <begin position="91"/>
            <end position="414"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="3">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="414"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="414" mass="45568" checksum="2B3E6D91E568CAD3" modified="2018-04-25" version="1" fragment="single">MKFSYLRRSFAPTVALCVLLPVCASAQDQAAPAATTPVQVTGTLGAPNATTTIPGDQLPAPAPEFGGVIKDDALNSTSWWPPRIVPPKDAPNILMIMTDDAGFAVPSTFGGVIPTPAMDDLAADGLRYTRMMSTSLCSPTRAAMITGRNHHSVGFGVIAEQATGFPGYDSVIGVDNATIGRILRDNGYATSWFGKDHNTPTYEASQAGPFTQWPTGMGFDYFYGFVGGDANQWGPNLFRNTTQIYPFDDFPSTLKMDRSDPNAKIWPVTGEESSWNLITAMADDAIHWMDVIHQTNPSQPIFVNYVPGSSHAPHHPPKEWVDKIHAMHLFDDGYEKLRERIFESQKKMGVVPADLELTPWPADILAPWDTLSDEAKKLYIRQVEVFAAYVAYNDHEIGRVIQHFKDLGRYDNTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX2</accession>
    <name>A0A2M9PDX2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000335">
        <property type="protein sequence ID" value="PJN95713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="371" mass="41178" checksum="ACCC213BCAF6C9D7" modified="2018-04-25" version="1" fragment="single">ARPAIRFKASEIRALDVENDLAWLWDEDAPTAFLIATSDDSLNMSTALRIETAMQRRRLPHVLICVRQWDAVAHGGPAHANPLLHIITFGNSRVTARGWAGRQSQQLLTAKALNAHYEARRDQEDAWDGLADLYRRANLRAVRHGSSRLLDLGLQWRGMATGVLPRVDLAALPELARAMRAPLGRDRPPAGSAEAELWEAARSEHSRWLIDRATSGFRPAHGSRSDVLRRQTLMVDFRDLSEEVRRYDNHLLEVLAQLKNCCAPLALVRRVATIDDAGDPVEGHGDGATELQVRIPDPYRLADAARLAARVQAWARAQTACRLHLLIHDPAEYPRRVEPDALLGVASLVEGLDSGIVCDVTWRSDAAEPHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX8</accession>
    <name>A0A2M9PDX8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000326">
        <property type="protein sequence ID" value="PJN95736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014974359" evidence="1">
        <location>
            <begin position="24"/>
            <end position="318"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="31"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="318" mass="34058" checksum="9FBA1EACB8386806" modified="2018-04-25" version="1">MHRRTLLLGTALMAGLAAAPAFAQDAEKKTIGVAIPSATHGFMGGLNFHARQAIDRLKATYPQLDFVLATAGDAGTMVNDIEDMVATRDIDALVVLPFESEPLTGPVKAVADQGIWVTVVDRGLSQTGIEDLYVSGDNPGFGKAAGEYFATHLKSGDNIVVLRGIPTTLDNERVDAFMAAIEGSGINVLDMQHGNWNRDDAFNVMQDFLSKYPDIDAVWASDDDMATGVLEAIDQAGRKEEMWVVGGAGMKEIIKRIMDGDPQLPVNITYPPAQIATAIELTALGQVSSTPVSGRFIIGSQVVTPENAELFYFPDSPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE11</accession>
    <name>A0A2M9PE11_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">PBPb domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06435</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000304">
        <property type="protein sequence ID" value="PJN95790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="77"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="169"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="20534" checksum="56B2EEE59A48F6B4" modified="2018-04-25" version="1">MASWTMACSGGFGRYLYAEGAGGRQCACAFRTVNPLDHKRNVTEHVAKRPRGGSDPMRRSLCCAALVGLAAAPALALDVCVEGAYPPFSEVTADGTIKGFDIDIAGALCDRLGEACVFKLTRWERMIPALNGDVCDAIVASMSDTDARRRLIDFTQPYYRSPVRFIAPAGPRATTTPPRSRARWSASSAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE58</accession>
    <name>A0A2M9PE58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Xanthine dehydrogenase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000290">
        <property type="protein sequence ID" value="PJN95829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005107">
        <property type="entry name" value="CO_DH_flav_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036683">
        <property type="entry name" value="CO_DH_flav_C_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03450">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55447">
        <property type="entry name" value="SSF55447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CO_deh_flav_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6824" checksum="5E4F5068C97D70DB" modified="2018-04-25" version="1" fragment="single">PWSAETAQAAMAALEQDFQPLSDWRASADYRRLVARNLIWRFWLETAGETVRLDRALAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE87</accession>
    <name>A0A2M9PE87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000282">
        <property type="protein sequence ID" value="PJN95856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="2">
        <location>
            <begin position="21"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="116"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="129"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="15695" checksum="3C45C0DCFC3B7D3F" modified="2018-04-25" version="1" fragment="single">MAGQVLEARGITRTFFGVRALDRVDFTLQAGEIHALVGENGAGKSTLVKILTGALARDAGVIRIDGVEIAPRTVAEAQALGIGTVYQEVNLLENLTVAENLYLGRQPRRFGTRRCSRTPLARSRRGRTRSWSAPMTRTSRSSRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE91</accession>
    <name>A0A2M9PE91_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Iron ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06170</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial solute-binding protein 9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000289">
        <property type="protein sequence ID" value="PJN95832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007155">
        <property type="term" value="P:cell adhesion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030001">
        <property type="term" value="P:metal ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006129">
        <property type="entry name" value="AdhesinB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006128">
        <property type="entry name" value="Lipoprotein_4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006127">
        <property type="entry name" value="ZnuA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01297">
        <property type="entry name" value="ZnuA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00691">
        <property type="entry name" value="ADHESINB"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00690">
        <property type="entry name" value="ADHESNFAMILY"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0732">Signal</keyword>
    <keyword evidence="1 3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014624654" evidence="4">
        <location>
            <begin position="20"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="293" mass="31094" checksum="371FF7A04C2BD7B6" modified="2018-04-25" version="1">MFRPLLLVLALAAALPAAAAEGKLKVATTFTVIADMAANVAGDAAEVTSLIPAGAEVHNFQPTPSDIRAAMDADLILWNGLGLEAWFDRFFRNLRDTPAASVSEGVEPIAIATGPYAGKPNPHAWMSASDALIYVENIRKAMAAADPANAETYAANAAAYSAEIEALVAPIRDRLATLPENRRWLATSEGAFSYLTRDLGLGEIYIWPINEANTGTPQQIRRAIDAIRENAVPAIFSESTVDPRSAQQVARETGIAYGGVLYVDSITTADGPAPSYLDLMRVTTARIAEALAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC4</accession>
    <name>A0A2M9PEC4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Lactamase_B domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05960</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000277">
        <property type="protein sequence ID" value="PJN95873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="2">
        <location>
            <begin position="43"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23756" checksum="593AA9B6BB58D7AB" modified="2018-04-25" version="1">MRVFGMFRLGVAVRVVIVFGVRVLALVLMGLEGGAEAHGQKRHVRDLHHNRRSRLPVWADAETGSMLVQRFGYAFRQPPGSDYPPILDLHAIEGPFAVDGPGGPIPFTPIRVVHGNIDALGFRIGGLVYMPDVSAIPDQAWPLLAGLEVFVIDALRYRPHPTHAHLARALEWIERAEPERAVLTNLHNDFDYLRLSAEIPAGVTPAFDGLALDFGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF3</accession>
    <name>A0A2M9PEF3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000253">
        <property type="protein sequence ID" value="PJN95930.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95930.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6713" checksum="28CAF9519825DA95" modified="2018-04-25" version="1">MNLAAIFFTVCSTAGGFCENHRIEAAIPPVQCATGLVQGYIARGFPFRGDQKLVSYRCEAQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG1</accession>
    <name>A0A2M9PEG1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH_38 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000264">
        <property type="protein sequence ID" value="PJN95902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025246">
        <property type="entry name" value="IS30-like_HTH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13936">
        <property type="entry name" value="HTH_38"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_38" evidence="1">
        <location>
            <begin position="22"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="15519" checksum="D6F291AF8C2FB0B8" modified="2018-04-25" version="1">MNCDKLEIQGFAWRTPYPRPFTHLSLEERRQLARLRESRMPVAKMATALRRHRSTIHRELKRNWLHDAEVPQAPGKEPVQPNRCFEYSVTDAPDSSVVALPPRTKNRCKLPSLRKAAFGPFSQRIARTRAPFSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ4</accession>
    <name>A0A2M9PEQ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05110</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000228">
        <property type="protein sequence ID" value="PJN96006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Arabinose_bd" evidence="4">
        <location>
            <begin position="22"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="209" mass="23187" checksum="427B20007B4B7E13" modified="2018-04-25" version="1" fragment="single">MEIAIVRAAHLHVYLDELRAIGVPVERELGRSRLPSWVEETPDAYLSIPLCLDWLARCSRDVELADFSFRAAQRVSLASVSRPLQRAMLDAPTGFARMQALLRLATLDDSVLAIRMRPEGDRIRVICDLEGLGRNPFLCIAEWLSLQAMVSIVRSVAGPAWRPPEMTFVAPQRPSIAAQEAYPDTRILVGRPHASILVDSDVLARPSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER2</accession>
    <name>A0A2M9PER2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydantoin racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000220">
        <property type="protein sequence ID" value="PJN96029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036361">
        <property type="term" value="F:racemase activity, acting on amino acids and derivatives"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015942">
        <property type="entry name" value="Asp/Glu/hydantoin_racemase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01177">
        <property type="entry name" value="Asp_Glu_race"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014819034" evidence="1">
        <location>
            <begin position="28"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="10808" checksum="0A8B784ABA029AF4" modified="2018-04-25" version="1" fragment="single">MTSSRLSRLALAASLLAAPLVALPALAAEKVIVLINPNSNEGATSSMAELARMELGDGLRVEGRSNAGAPPLLTTPEDMRNAVSGVVEIGVAAAQDETVAAIIVAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER5</accession>
    <name>A0A2M9PER5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">Elongation factor Ts</fullName>
            <shortName evidence="5">EF-Ts</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">tsf</name>
        <name evidence="9" type="ORF">CNY89_05325</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the EF-Ts family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000241">
        <property type="protein sequence ID" value="PJN95974.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00050">
        <property type="entry name" value="EF_Ts"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036402">
        <property type="entry name" value="EF-Ts_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001816">
        <property type="entry name" value="Transl_elong_EFTs/EF1B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014039">
        <property type="entry name" value="Transl_elong_EFTs/EF1B_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018101">
        <property type="entry name" value="Transl_elong_Ts_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009060">
        <property type="entry name" value="UBA-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11741">
        <property type="entry name" value="PTHR11741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00889">
        <property type="entry name" value="EF_TS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46934">
        <property type="entry name" value="SSF46934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54713">
        <property type="entry name" value="SSF54713"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00116">
        <property type="entry name" value="tsf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01126">
        <property type="entry name" value="EF_TS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01127">
        <property type="entry name" value="EF_TS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5 6" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="4 5 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EF_TS" evidence="8">
        <location>
            <begin position="70"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="region of interest" description="Involved in Mg(2+) ion dislocation from EF-Tu" evidence="5">
        <location>
            <begin position="79"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95974.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="30503" checksum="FE651005D04C8276" modified="2018-04-25" version="1">MTITATMVKELRDTSGAGMMDAKKALTETGGDMEAAIDWLRTKGLAKAAKKSGRTAAEGLVGVAVKGGVGVAVEVNSETDFVARNSDFQAIVRAIAEVATGCADIEALRGAPLDDKTVQEAVTDKIVTIGENLHLRRMASVEGDTVAAYVHNSVGENLGKIGVLVALKGADNGIGKQIAMHVAATNPASLSQADLDPAVIEREKNVLTEQARESGKPEAVIEKMIVGRMQKFFEEVTLLNQKFVMNPDLTVAQAAKDAGVEVVGFARLAVGEGVEKEVEDFAAEVAKTAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES5</accession>
    <name>A0A2M9PES5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000215">
        <property type="protein sequence ID" value="PJN96039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="273"/>
            <end position="299"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="319"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="401" mass="44106" checksum="78B93D0F73A4A341" modified="2018-04-25" version="1">MRPSPFRQNGGHDSGERPSPLEFRRVASLLVPLKGEAAVAGQLMAALGRMDYPAPLLDIKLVLESCDHATLAAVEAAGMPPTVEVVIVPPGAIQTKPRAMNYALPFCRGEIVGVYDAEDLPDPRQIRAVVRHLTAAGPEVACVQGYLDFYNTEANWLSRCFALEYATWFRVILPGVQRLGVPIPLGGTTVFFRRRALERIGGWDAHNVTEDADLGMRLARFGHVCEMIPTVTLEEANAQSARRWIRQRSRWLKGYAITWATHMRAPRSLLRDLGWRGFLGFQVLFLGALTSYLGMPLLWSLWLVAFGSGAPLLDGLPAGLVSAVFVSIFAGNVVMLATVATALADSNRTHMLGWALTLPAYWPLGAVASYRAIAEVFYAPFHWHKTEHGGEERPQVRKAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY4</accession>
    <name>A0A2M9PEY4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04635</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000201">
        <property type="protein sequence ID" value="PJN96088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022452">
        <property type="entry name" value="MqsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032758">
        <property type="entry name" value="MqsA/HigA-2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15731">
        <property type="entry name" value="MqsA_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03830">
        <property type="entry name" value="CxxCG_CxxCG_HTH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="62"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14016" checksum="BB08D6289ABC7BE4" modified="2018-04-25" version="1">MTRGMRPMTLSYKGRSVEIDMPGWYAEGVEDGIHDGDDMKVSDRALHRLKAQAEGLLLPEDVRRIRRKLGLSQREAGLVIGGGPNAFQKYEAGDVLASHAISSALRVLDAHPDALSILRAHRSERSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ2</accession>
    <name>A0A2M9PEZ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Gluconolactonase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000189">
        <property type="protein sequence ID" value="PJN96127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013658">
        <property type="entry name" value="SGL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005511">
        <property type="entry name" value="SMP-30"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08450">
        <property type="entry name" value="SGL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01790">
        <property type="entry name" value="SMP30FAMILY"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGL" evidence="1">
        <location>
            <begin position="11"/>
            <end position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="285" mass="30717" checksum="A7A44780CAAFC8DE" modified="2018-04-25" version="1">MSVFDGRRCELGEGALWHPLREELFWFDILEGRLLSRGASGETERGLGEMASAAGWIDRDRLLIASETTLSVLHLETGARETVAPLIEAGSGLRSNDGRADPWGGFWIGTMGKKAEAGAGAILRYHGGELRTLQEGITIPNAICFDGPRRLAYFTDTRVGTIWRQRLDPETGWPVGEREDFLPLKAAGFNPDGAVTDEGGRIWNAQWGAGRVACYDPSGKLVGEERFPAGRVTCPAFGGAELDRLFVTSAQEGMAAAERSAEPEAGMTFARAVAARGLPEPAVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF05</accession>
    <name>A0A2M9PF05_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Spermidine/putrescine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04325</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000185">
        <property type="protein sequence ID" value="PJN96137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="185"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="230"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="56"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="28784" checksum="832B958DFEE689A1" modified="2018-04-25" version="1">MKGSRLFAWAALGVGMLYFFLPLIGTFEFSLRMQRGVYSFEAYRVVFADPRFRQTFAYSTALALATIVVGVLIVAPTAYWVRLRLPRLRPVIEFITLLPLVIPAIVIVFGYIRLYNTSSWLPLTGSSGGTNFLLLMGYATLALPYMYRAVDTGLRTIDVQTLTEAAESLGAGPIRIMARVILPNVTVAILSGAFLTFAIVIGEFTMAALLNRPAFGPYLQLIGANRAYEPAALAVIAFAVTWACMGLIALVTRLQKFKPPKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF32</accession>
    <name>A0A2M9PF32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Fe-S cluster assembly ATPase SufC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sufC</name>
        <name evidence="6" type="ORF">CNY89_04435</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily. Ycf16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000190">
        <property type="protein sequence ID" value="PJN96122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03217">
        <property type="entry name" value="ABC_FeS_Assembly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010230">
        <property type="entry name" value="FeS-cluster_ATPase_SufC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43204">
        <property type="entry name" value="PTHR43204"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01978">
        <property type="entry name" value="sufC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="2"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="251" mass="27250" checksum="F8DB6E9A2D7DB8DB" modified="2018-04-25" version="1">MLKIDDLHVKLEEEDKPILKGVSLEVPAGEVHAIMGPNGSGKSTLSYVLAGRDGYEVTGGTAFLDDIDLLSLEPDERAAAGLFLAFQYPVEIPGVGNMTFLRTALNGQRKARGEPEVNAADFLRLVREKAKSLDIDAEMLKRSVNVGFSGGEKKRNEILQMAVLEPRMCILDETDSGLDVDAMKLVAAGVNALRSQGRAFLVITHYQRLLDHIRPDVVHIMADGRIVQSGGPELALEVETNGYADILRSVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF55</accession>
    <name>A0A2M9PF55_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">(p)ppGpp synthase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">ATP:GTP 3'-pyrophosphotransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04040</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000172">
        <property type="protein sequence ID" value="PJN96185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01668">
        <property type="entry name" value="TGS_RSH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045600">
        <property type="entry name" value="RelA/SpoT_AH_RIS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004095">
        <property type="entry name" value="TGS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012676">
        <property type="entry name" value="TGS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033655">
        <property type="entry name" value="TGS_RelA/SpoT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13291">
        <property type="entry name" value="ACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19296">
        <property type="entry name" value="DUF5913"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02824">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81271">
        <property type="entry name" value="SSF81271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51880">
        <property type="entry name" value="TGS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGS" evidence="4">
        <location>
            <begin position="44"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="3">
        <location>
            <begin position="292"/>
            <end position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00029754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00032407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="371" mass="40887" checksum="7CCCB1DEF14DFA40" modified="2018-04-25" version="1">MFWPLIARVRTSFAVDPFKWLSDVTKRLDDEDDSADFLEHMKLEMFTDQVFCFTPKGEVVKLPRGATPIDFAYAIHTRIGDSCVGAKVDGRRVPLWTKLRNGQAVIIIRAEGQRPQPSWEDMVVTGRAKSAIRKSLREEQRATLVRMGREIARVALERVGKKATDKALETAARRLAIEDAEEVLARLGGAEMTGKDLVGALYPELVRDAGLPTAHDKAAPVVIGLGKGQEARPAPCCAPIPGERIVGIAVRGKGVMIHAIDCAELAGFEDEPDRWIDLRWAEGVAARNHLARVEIIMANDSGVLGRICTLIGEHRANITDIAFTERKPDFYRVTVEMEVRDVAHLSNVLTAIDADSDVAQVRRARRGSPSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF58</accession>
    <name>A0A2M9PF58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-deoxyinosine glycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000169">
        <property type="protein sequence ID" value="PJN96190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026353">
        <property type="entry name" value="Hypoxan-DNA_Glyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04274">
        <property type="entry name" value="hypoxanDNAglyco"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10435" checksum="D1CDEE213C475F55" modified="2018-04-25" version="1" fragment="single">MSTRSSSGSSAERARAFAPVAGPGTRVLILGSLPGVASLAAGQYYAHPRNAFWRLAGAVIGADLVPLAYDARLAALTRAGLGLWDVIASAERVGSLDAAIRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH1</accession>
    <name>A0A2M9PFH1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyridoxamine 5-phosphate oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000137">
        <property type="protein sequence ID" value="PJN96297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011576">
        <property type="entry name" value="Pyridox_Oxase_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01243">
        <property type="entry name" value="Putative_PNPOx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Putative_PNPOx" evidence="1">
        <location>
            <begin position="40"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01243"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="24005" checksum="877EC79926F39BB8" modified="2018-04-25" version="1">MAYGFMEIALTPSVREAQAEMGADHLWSAFEGHRESDRFTENETAFIAERDSFYIASVSETGWPYVQHRGGPAGFLKVVDERTLAFADYRGNRQYISAGNFLANGRACLILMDYPRRARLKIYAQVERLAPDADPDLRERVTDVAYRARAERIFRLRLKAFDWNCPQHLTPRFTEREVAVAVQPLHDAIARLERENALLRSRLGLPEDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI6</accession>
    <name>A0A2M9PFI6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">dATP pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03470</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000141">
        <property type="protein sequence ID" value="PJN96289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1450">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004680">
        <property type="entry name" value="Cit_transptr-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031312">
        <property type="entry name" value="Na/sul_symport_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006037">
        <property type="entry name" value="RCK_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036721">
        <property type="entry name" value="RCK_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03600">
        <property type="entry name" value="CitMHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02080">
        <property type="entry name" value="TrkA_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116726">
        <property type="entry name" value="SSF116726"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01271">
        <property type="entry name" value="NA_SULFATE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51202">
        <property type="entry name" value="RCK_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="316"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="346"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="373"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="401"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="439"/>
            <end position="462"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="84"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="domain" description="RCK C-terminal" evidence="7">
        <location>
            <begin position="169"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51202"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="464" mass="50434" checksum="1AEAC1FBC3A6044F" modified="2018-04-25" version="1" fragment="single">LAHSMSLSPSKLLMPLSYVTVLAGMISMIGTSTNLLVDGVARENGLAPFGLLEIAPVGIIMTLVGVALLFVLMPLLMPDRESMVDMLGPRKTMKFFTEVVVPEASPLIGQKVMEVALFRRDGMRVIDVLRGDESLRRQFPDVALAEGDRVVLRTEMRELLGLKDSNHVTLVDRVSSKSTTTVEALISPDCALVGRSLGSLRLRRRYGVYPLAVHRRNQNVGRQLDEVVVRVGDTLLLEGEAEDIRRLAADVDLVDIAHPVERPYKRERAPLVLAVLGAIVLFSSLEVAPIQILAMLGVVTLLVTRTITPEEAYETVNASLMALIFAMLIVGVALDESGAVEMLVEWVSPTLLLMSPFWVLVSLYFFTQILTELLSNNAVAVVVTPVAIALAHSLGLDPRPLVVAVMFAASVAFATPIGYQTNTLVYGPGGYRFSDFMRIGIPLNLVTGITVCLLIPIFWPLAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ2</accession>
    <name>A0A2M9PFQ2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">NADH-quinone oxidoreductase</fullName>
            <ecNumber evidence="8">7.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_02865</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="8">Binds 1 [2Fe-2S] cluster per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 8">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the complex I 75 kDa subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000111">
        <property type="protein sequence ID" value="PJN96387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042773">
        <property type="term" value="P:ATP synthesis coupled electron transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000283">
        <property type="entry name" value="NADH_UbQ_OxRdtase_75kDa_su_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010228">
        <property type="entry name" value="NADH_UbQ_OxRdtase_Gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019574">
        <property type="entry name" value="NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10588">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00929">
        <property type="entry name" value="NADH-G_4Fe-4S_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01973">
        <property type="entry name" value="NuoG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51839">
        <property type="entry name" value="4FE4S_HC3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00641">
        <property type="entry name" value="COMPLEX1_75K_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00642">
        <property type="entry name" value="COMPLEX1_75K_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00643">
        <property type="entry name" value="COMPLEX1_75K_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4 8" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5 8" id="KW-0408">Iron</keyword>
    <keyword evidence="6 8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-0874">Quinone</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-1278">Translocase</keyword>
    <keyword evidence="9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="466"/>
            <end position="483"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="489"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="10">
        <location>
            <begin position="5"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S His(Cys)3-ligated-type" evidence="12">
        <location>
            <begin position="90"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="11">
        <location>
            <begin position="227"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="529"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="529" mass="55942" checksum="E116C88254D15880" modified="2018-04-25" version="1" fragment="single">MSDLRKIIIDDLEVEVPPAMTLLQACEVAGVEIPRFCYHERLSIAGNCRMCLVEVVGGPPKPTASCAVQVKDLRPGPEGAPPVIKTRSPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAYGVDFSRYREPKRAAIDPDLGPLVKTEMTRCISCTRCVRFITEVAGVPEMGQTGRGEDSEITSYLGAMLTSELQGNVIDLCPVGALTSKPYAFTARPWELTKTESIDVIDALGSSVRVDAKGREVMRILPRNHDGVNEEWLSDRSRFAWDGLRRQRLDRPYVRKDGKLVPATWAEAFAAVKAGFAGKKVAALAGDLASTEAILALKMLTQTLGGTMECRLDGAALPEGNRSGYAGTARIEDLDEAAAIHLVGVNPRHDAPVLNARIRKAWLRGARVTRIGGDDDLSFPVESLGTGPGDIGKLNDQTSDGPVVVVLGASALTGTGGAAVLGAAMVAMIPMVLAGVMGAIVGIGGTLIDQIENAATLTDAAGFLIVALAAIFLMSQVPTMVNGLAGTVVATASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ3</accession>
    <name>A0A2M9PFQ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_03050</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000121">
        <property type="protein sequence ID" value="PJN96352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009103">
        <property type="term" value="P:lipopolysaccharide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032807">
        <property type="entry name" value="GNVR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003856">
        <property type="entry name" value="LPS_length_determ_N_term"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13807">
        <property type="entry name" value="GNVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02706">
        <property type="entry name" value="Wzz"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="418"/>
            <end position="438"/>
        </location>
    </feature>
    <feature type="domain" description="Wzz" evidence="7">
        <location>
            <begin position="11"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="domain" description="GNVR" evidence="8">
        <location>
            <begin position="387"/>
            <end position="441"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF13807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="453" mass="49302" checksum="D3F14A7B2E6403F5" modified="2018-04-25" version="1">MIHLEPTVGTVLAALWRHKRLVVLSILVMFALAVAAYLTTTPTYEASTSLLVGQDRSDAAAGGLLPTEVLNSQVRIADSDSVVRAAIEHVGLDRLPEAEPGPLSGLGGKLRGMVKQWLRPEPAGGASAGASISAMDLAVERVRRSMSARAEPNTSVLTIAFHHESPAVAAEMTNALAEAFIDQQNSLLRRPGLVEFLRLQTQRFDDEVRRASMELQDFMHREGMYSGEEQRSLLLGRASQLDADLSRTRSSLAQAEGQKHALSRQLALLNPVARSPFALGFVESLDADDIMGREADAEAALPLRDDDTPPLLMIKVFQEAMTAYRILDSEVAGLRDLATQQAKEVEDVDRELARVTSIQGEYERLRRAVDLATFNAETFAKRTVAEQIESDLRDARLSNVRVIQPATPPRQAASPKGVLYAAFGLAFGLVLGVALALAREFYDINRRDGAQGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR5</accession>
    <name>A0A2M9PFR5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03010</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000118">
        <property type="protein sequence ID" value="PJN96362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011040">
        <property type="entry name" value="Sialidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036278">
        <property type="entry name" value="Sialidase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13088">
        <property type="entry name" value="BNR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50939">
        <property type="entry name" value="SSF50939"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sialidase" evidence="2">
        <location>
            <begin position="44"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="15304" checksum="024CBD29A13955F5" modified="2018-04-25" version="1" fragment="single">MTPDDIAARMNGRIDPVGPGRAEAFLSSPVVHNHAAFLQFLPDGTLACTWFGGTLEGRSDIFVHAAMLAPGAEAWSAATQVSDDADRSEQNPVIFADPADGTILLFHTAQPGGRQEDCEVRRRPLTLSSEGLEGGPAVSLPLPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT1</accession>
    <name>A0A2M9PFT1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">STAS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02725</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000106">
        <property type="protein sequence ID" value="PJN96405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="2">
        <location>
            <begin position="65"/>
            <end position="174"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19557" checksum="6305AE15197A8CB3" modified="2018-04-25" version="1">MVEKPAIAALTRASRGDAAVLYVTLALTVLRDLTEAIVVGFALGAMLFIHRMSRAVEVAPHAEDEAPGAISTPEAMIYRVRGALFFGAVSAVAAVLERLDDDHKVLIVDFTDVTLADSSAAHMIEGLAHKAHRRGTAIYLTGATPALRRELLTQGVRPPLVHYAATIETALDSARRRGLIPAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY4</accession>
    <name>A0A2M9PFY4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000091">
        <property type="protein sequence ID" value="PJN96461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1750.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038109">
        <property type="entry name" value="DNA_bind_recomb_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15637" checksum="F7BC51D48D024B04" modified="2018-04-25" version="1">MRSIATARSALRLAQFEREVTAERIRDKIAASKKKGMWMGGVMPIGYRVAARKLLRHTEEASQVREIFVRYLALGTVPKLQAEMERRGMRAAQDQRCGTHAGRRCLLARQAPSPAHEPGGDRPHPAQDRHLPRPARGDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG05</accession>
    <name>A0A2M9PG05_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peroxiredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000088">
        <property type="protein sequence ID" value="PJN96473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9727" checksum="6EFDFEEEA2EFF049" modified="2018-04-25" version="1" fragment="single">MADRLHRYAVRVVWTGDAGSGTSSPRAYSRAHEIEAAGKPSIPGSSDPAFRGDPARWNPEELLLASLSACHKLWYLGLCAAAGVVVVAYED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG50</accession>
    <name>A0A2M9PG50_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TIGR02217 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000074">
        <property type="protein sequence ID" value="PJN96525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011740">
        <property type="entry name" value="DUF2460"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09343">
        <property type="entry name" value="DUF2460"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02217">
        <property type="entry name" value="chp_TIGR02217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22301" checksum="44E9C381C61C046B" modified="2018-04-25" version="1">MAFHEVRFPDNVSRGARGGPERRTQIVELASGDEERNASWANSRRRYDVAYGIRRADDLAAVVALFEARNGRLHGFRFKDWGDHKSSLPSGTPSPTDQAIGTGDGATTAFQLIKRYASGAQSWTRAIAKPVGGSVRIALGGVEQLSGWSVDIATGLVSFSAAPGGGVAITAGFEFDVPVRFDTDALDVTLDLERPGSITSIPLLELRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF2</accession>
    <name>A0A2M9PGF2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2-keto-gluconate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000050">
        <property type="protein sequence ID" value="PJN96627.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000172">
        <property type="entry name" value="GMC_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00732">
        <property type="entry name" value="GMC_oxred_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_OxRdtase_N" evidence="2">
        <location>
            <begin position="14"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="GMC_oxred_C" evidence="3">
        <location>
            <begin position="391"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="447"/>
            <end position="471"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="447"/>
            <end position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF05199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96627.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="523" mass="56401" checksum="7D6F50310A5507C9" modified="2018-04-25" version="1">MTASFDLKDDSVVVVIGTGAGGGVLANELAQKGVSVVALEAGGRYLPEDYVNDEWEAFGQLSWLDPRTTSGDWRVAKDFSGLPAWIVKAVGGTTIHWAGASLRFQDHEWKARTTYGPVEGANLLDWPIDPAEMAPWYDKAEAKLGVTRTGGRAGLPGNNNYKVLEKGAQALGYKEVSTGHMAINSADYDERISCQQTGFCFQGCKWGAKWSSAYTDIPRGEATGNLEVRDRAQVLRIEHGPDGKVTGVVYVDKDGQQQFQAARIVAVAGNSIESPRLLLNSASTTFPDGLANSSGQVGRNYMRHTTGSVYAVFPQPVKMWRGTTMAGIVRDEARHDPSRGFVGGYELETLSLGVPFMAAFLDPGAWGREFASAMDGYENMAGLWIVGEDMPQESNRITLSADVKDAHGLPAPNVNFSDHPNDVAMRNHAYAVGDEIYRAVGATRTFPTPPYPSTHNLGTNRMSEKPQDGVVNKDGRSHDIPNLFVSDGSQFTTGAAENPTLTIVALAIRQADHIAGAMSRGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU7</accession>
    <name>A0A2M9PGU7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11172" checksum="F1006044ADF97D4E" modified="2018-04-25" version="1" fragment="single">LRPYIVLRLVSEVREATGDGLRPGLVRSRVQADCYGEDYYLGLAIARQLITAVEGRRVGRFQRIAVDGARDLSGTDIPGTGAAHRRSVDLLIFHAEQRRAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P487</accession>
    <name>A0A2M9P487_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004773">
        <property type="protein sequence ID" value="PJN92357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7019" checksum="E4F039FD196CAC57" modified="2018-04-25" version="1" fragment="single">PEATQYRLAVDLAFQKQGVAITQKDVTSRFDVTGTAGRRRRSTGWRSISPSRSRASRSHRRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A7</accession>
    <name>A0A2M9P4A7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004736">
        <property type="protein sequence ID" value="PJN92376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7277" checksum="52F326360F7BFA25" modified="2018-04-25" version="1" fragment="single">LSDADLRFAHANAVQLDGAILRKARLDQADLQGAHLEGVDLAGARLEGANLSQARLEHATFTGASLVGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G7</accession>
    <name>A0A2M9P4G7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004536">
        <property type="protein sequence ID" value="PJN92436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8266" checksum="5BA2FA1955CA5678" modified="2018-04-25" version="1" fragment="single">LGERRPLGLEVEHRFLVRRLGCWGASVWPMPAMVASASACALLGERRPLGLEVEHRFLVRRLGCWGASVWPMPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J0</accession>
    <name>A0A2M9P4J0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Penicillin-binding protein activator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004422">
        <property type="protein sequence ID" value="PJN92471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4406" checksum="53C729AC85A5E343" modified="2018-04-25" version="1" fragment="single">MARAAGINILAFSNNPSVAGPGTYLLGVTPGTAANSLVSFARTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L3</accession>
    <name>A0A2M9P4L3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004428">
        <property type="protein sequence ID" value="PJN92470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7689" checksum="CF5A4CCF45521ED5" modified="2018-04-25" version="1" fragment="single">MVSSQVSFATRPPASRRLPVLVELLLGRHAAGGGAGAGTRPDRRGMVSSQVSFATRPPASRRLPVLVELLLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L7</accession>
    <name>A0A2M9P4L7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004375">
        <property type="protein sequence ID" value="PJN92486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7435" checksum="3FF03EFD320FCC4E" modified="2018-04-25" version="1" fragment="single">YGQQVGKTWDPAGLTRQDLWVLDRPLYHALATQAHRMRKLKQPIPAGFDKLLESPRRGTGPGLTQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P518</accession>
    <name>A0A2M9P518_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003972">
        <property type="protein sequence ID" value="PJN92615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="8935" checksum="FE434EA9C18C9AF5" modified="2018-04-25" version="1" fragment="single">FSSRVSSTALGLGFAAAMACTLGGGGGKVISPSRSFLAEIGRHRALVAVTVFQAVCALLFLADVLSELPELRTDPAHPLVELAAVAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P529</accession>
    <name>A0A2M9P529_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003964">
        <property type="protein sequence ID" value="PJN92618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029471">
        <property type="entry name" value="HNH_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14279">
        <property type="entry name" value="HNH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH_5" evidence="1">
        <location>
            <begin position="12"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5821" checksum="A00B545A7D12BF8B" modified="2018-04-25" version="1" fragment="single">MMRIVRRDDYRCQHCNKKLQDNEIEFDHIIPVSKGGSSEEHNIRLTCFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P589</accession>
    <name>A0A2M9P589_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003791">
        <property type="protein sequence ID" value="PJN92678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8280" checksum="8940CDC45AF8216B" modified="2018-04-25" version="1" fragment="single">RPWPRRTRPHRSDLPEAEGLALYSGRSLRPGLAAVDEAAVQKRLGHASAEMIRRHQRRRDRDRVNLTKAEGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K0</accession>
    <name>A0A2M9P5K0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_26495</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003451">
        <property type="protein sequence ID" value="PJN92795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="38"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11615" checksum="AA3CA08F76C63B60" modified="2018-04-25" version="1" fragment="single">AFAGDAFFVFMLVQFLRSIPRDMEEAARVDGATSLQTLLYIVVPMLTPALISVALFQFMWTMNDFLGPLIYLSSVDKFPVSLALKLSIDASEAFEWNKILAMSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5U0</accession>
    <name>A0A2M9P5U0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003181">
        <property type="protein sequence ID" value="PJN92885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="13182" checksum="CC7ACA97E806304F" modified="2018-04-25" version="1" fragment="single">FATLKARLAEGGRAVIQAITVPDERFPRYRRGSVSIEMIEAVGERRWPTYFATLKARLAEGGRAVIQAITVPDERFPRYRRGSRRLQRAVDHHHQLVDVERLLDEVVGALLDRPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5U4</accession>
    <name>A0A2M9P5U4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_25550</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003143">
        <property type="protein sequence ID" value="PJN92899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12873" checksum="E20C20D35B23BACB" modified="2018-04-25" version="1" fragment="single">DTRAGRIELAIPKLRKGSYFPSFLEPRRTAEKALVAVIQEAYVHGVSTRAVDDLVKAMGAGGMSKSQVSRLCAEIDVRVNAFLQRPLEGAWPYLWLDATYIKVRESGRIISRAVIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P621</accession>
    <name>A0A2M9P621_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cu(I)-responsive transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002972">
        <property type="protein sequence ID" value="PJN92965.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92965.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4071" checksum="8CA900887EC17674" modified="2018-04-25" version="1" fragment="single">ELTGLREMLGHLVENCHGDARPDCPIIDGLSGRSRDH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P623</accession>
    <name>A0A2M9P623_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002906">
        <property type="protein sequence ID" value="PJN92996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="14204" checksum="7DCEC40CF3A65CD5" modified="2018-04-25" version="1" fragment="single">FSLSTKPDRRIRRYENGPHYVEIRPNVVGLATVHDRDVLIFCVSQVMAAINAGRQVTRVLRFKAFDLLVATNRGTDGRGYEQLKAAFDRLQGTQIETNIITGGQEQIDTFSLIDRVRIIRETRDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P630</accession>
    <name>A0A2M9P630_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002939">
        <property type="protein sequence ID" value="PJN92979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7211" checksum="71D58EDAC184D3E6" modified="2018-04-25" version="1" fragment="single">MGMELDKQRANFRAGLAADIERDRESQKFDGAGAFCGCNVAEGFSNRVDLAAYTASFRIYTPRMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P647</accession>
    <name>A0A2M9P647_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002824">
        <property type="protein sequence ID" value="PJN93026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13923" checksum="C6DFD7B253C297BE" modified="2018-04-25" version="1" fragment="single">PATPRTGRLRFRWRTSQLHPWSDAGAPLAVPAPEGIVDRSLFAMTRAEADDVLPIALVTFKVASTFSGSGEGAPCNNIRAQHGPVLLALEAFSEQTRTFTSKNWTAPKRGASDFWRNCVTGQTTSRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P668</accession>
    <name>A0A2M9P668_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002751">
        <property type="protein sequence ID" value="PJN93051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="4"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14693" checksum="3EC23DD17769A63D" modified="2018-04-25" version="1" fragment="single">YHRNILIENNYIHSTNKLGITVAHGDGVVIRNNTVLHNDDMGFNSVPLINVSLLSRNVDIIGNTVYSVQKCGEFFLGGSRQHCRRPFQKSLGRHLQEWAFWCAAPPTPSPKAPPPCRWSTRAPRSSRSTPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D6</accession>
    <name>A0A2M9P6D6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002645">
        <property type="protein sequence ID" value="PJN93087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="51"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14264" checksum="56C8AC9BA8FC64B5" modified="2018-04-25" version="1" fragment="single">TRCSRAEFDAQVTRRTFMAATATATEAELNGAALTTDHVAAGPDAKQRTGLGSGRDPEIRESFMEGDLSSRSDVNKDGNLEWSRGAGDHSPGRLQVADAAPTTRCSRAEFDAQVTRRTFMAATATATEAELNGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I5</accession>
    <name>A0A2M9P6I5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_21030</name>
        <name evidence="4" type="ORF">CNY89_22155</name>
        <name evidence="3" type="ORF">CNY89_23270</name>
    </gene>
    <organism evidence="3 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002495">
        <property type="protein sequence ID" value="PJN93143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002222">
        <property type="protein sequence ID" value="PJN93269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001955">
        <property type="protein sequence ID" value="PJN93407.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039552">
        <property type="entry name" value="IS66_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13817">
        <property type="entry name" value="DDE_Tnp_IS66_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="2"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_IS66_C" evidence="2">
        <location>
            <begin position="33"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93407.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8836" checksum="B721DE7A48BED6FC" modified="2018-04-25" version="1" fragment="single">PVENAIRPLTLQRKNSLFAGHDEGAANWARIASLIETCKMNAVDPFAYLAFVLKAIAAGHPQSRIDDLTPWAFAKTSSPNE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J1</accession>
    <name>A0A2M9P6J1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF1768 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H2O = 2,5,6-triamino-4-hydroxypyrimidine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:23436"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58614"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:137796"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>5-amino-6-(5-phospho-D-ribosylamino)uracil + H2O = 5,6-diaminouracil + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:55020"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:46252"/>
            <dbReference type="ChEBI" id="CHEBI:58453"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002465">
        <property type="protein sequence ID" value="PJN93153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd15457">
        <property type="entry name" value="NADAR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.357.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012816">
        <property type="entry name" value="NADAR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037238">
        <property type="entry name" value="YbiA-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143990">
        <property type="entry name" value="SSF143990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000022"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6802" checksum="468E5C18193FC82F" modified="2018-04-25" version="1" fragment="single">MEEIRFYRASAKPYGPFSNLYRRTVEFEGEEFETSEHAYQAGKARKLAVRRWLMEAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P8</accession>
    <name>A0A2M9P6P8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002351">
        <property type="protein sequence ID" value="PJN93207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="35"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16367" checksum="2BD7C8B20BAED8B7" modified="2018-04-25" version="1" fragment="single">DLNLTHTSNRNYKFTEKVTIKSADPTQKAVVNELFIRGATNVTISDLKFDYTGVQGADTQSWQIGDPFFIENGAGITLDRLVIDGHSNSAGFGAGTGLRVKNSANVTISNTEMVNFKVAMNLWNSSDITVENNVIRKMNHDALFIGGVKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R2</accession>
    <name>A0A2M9P6R2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_14690</name>
        <name evidence="8" type="ORF">CNY89_14850</name>
        <name evidence="7" type="ORF">CNY89_22495</name>
        <name evidence="6" type="ORF">CNY89_25655</name>
    </gene>
    <organism evidence="7 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003176">
        <property type="protein sequence ID" value="PJN92888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002303">
        <property type="protein sequence ID" value="PJN93236.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001015">
        <property type="protein sequence ID" value="PJN94380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001000">
        <property type="protein sequence ID" value="PJN94406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93236.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7677" checksum="52E361762136962F" modified="2018-04-25" version="1" fragment="single">PLERVNREIKRRADVVGIFPNDDAIIRLVGALMLETNDEWAVARRYMSLETLAKVTNTENLRLPAVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P708</accession>
    <name>A0A2M9P708_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002105">
        <property type="protein sequence ID" value="PJN93323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="4"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="15524" checksum="66D4E9BF8421DF8C" modified="2018-04-25" version="1">MWGTDDVTIEGNSIRRMNHDGLFLGGIDGIKIEDNFIGDYRSQYPSALHKDSIQFYTNKNIAPPSEDIVIRGNTIESADYRHGIFVFNELLPRRQSIRYHRNILIENNYIHSTNKLGITVAHGDGVVIRNEHCPSQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P736</accession>
    <name>A0A2M9P736_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002008">
        <property type="protein sequence ID" value="PJN93376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18356" checksum="1EB0BC4CB78D34F6" modified="2018-04-25" version="1" fragment="single">DPAILKTVEWLRFRDDLFVSTGYKVGPLQIMINAELLRQPYRFRRDMTECPTVSSGLVRVTGSGHSFDIIPAASTKLRVMDVIRQSISKEKEILCFGDSGSSSGNDHALLAHPYGISVGEVCGAPDGCWSLFGDHPTGPDALLNVLRALVLSPSAGGIRLDVQSMALDTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I8</accession>
    <name>A0A2M9P7I8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_20185</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001778">
        <property type="protein sequence ID" value="PJN93524.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="4">
        <location>
            <begin position="8"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93524.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7415" checksum="21E1EEC0856FA217" modified="2018-04-25" version="1" fragment="single">MTDRIYNVLFLCTGNSARSILGEAVLNHLGKGRFRAFSAGSQLKGQVHPLALETLRNAGISTEGLRSKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N6</accession>
    <name>A0A2M9P7N6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VapC toxin family PIN domain ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001772">
        <property type="protein sequence ID" value="PJN93528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="30" mass="3150" checksum="59765BBED1251814" modified="2018-04-25" version="1" fragment="single">QLATFDRRLSTEAVAKGKSALCLIATATRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T0</accession>
    <name>A0A2M9P7T0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phosphopantetheine--protein transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001671">
        <property type="protein sequence ID" value="PJN93597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10730" checksum="CD4BA11B2C4AA49C" modified="2018-04-25" version="1" fragment="single">KAADIVLIPTRAEVLDIRAMTQTVRLVQQMNKRPSVVLTFCPPSGAEVEQARKIVVQLGADLSPVDVHLRKAFSRAQQEGLTAQEYEPTGKAAHSPRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P804</accession>
    <name>A0A2M9P804_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_19160</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001570">
        <property type="protein sequence ID" value="PJN93674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="122"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17795" checksum="709090D63992A624" modified="2018-04-25" version="1" fragment="single">PLSVIMVPLYSIISSLGLFNSLWGVILPTVATPTGVFILRQYMLTIPNELIEAARMDKASEWQIYWRIILPLTAPALAVLAIFSVVWRWNDFLWPLIVLSRRELYTLQVGLSIYSGELNVQWHYILAMTVVTMIPVVLVFLFLQRYITAGIAGTGLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P833</accession>
    <name>A0A2M9P833_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001546">
        <property type="protein sequence ID" value="PJN93701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011102">
        <property type="entry name" value="Sig_transdc_His_kinase_HWE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07536">
        <property type="entry name" value="HWE_HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00911">
        <property type="entry name" value="HWE_HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HWE_HK" evidence="1">
        <location>
            <begin position="6"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="20699" checksum="BCB33EB2C1A23EC3" modified="2018-04-25" version="1" fragment="single">TLLNHELSHRMKNMFSLVQAIANQTLRDVEERDLIHAFNERIRALSRAHDVLLKQSWAAAELGAVVEAVVATLAADGAFDISGPDVRLNPGATPTVSLLLYELATNALKYGALSTRDGRVEVRWRVEGSDAGETLTLDWTESGGPAVAQPSRVGFGSRLIRMGLTGSGGADLRYDAAGLRARFSAPFAQVSQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P893</accession>
    <name>A0A2M9P893_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbon monoxide dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001481">
        <property type="protein sequence ID" value="PJN93761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="1">
        <location>
            <begin position="2"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16352" checksum="05AA84260EE994D7" modified="2018-04-25" version="1" fragment="single">MPMVSLSVNGRAVRREVEGRTLLVDLLRQDLGLTGTHVGCDTSQCGACVVHVDGAPVKACSVFALDLEGAEVRTIEGMAGADGALGVVQAAFQEHHGLQCGFCTPGMVMSGAALLAENPDPSEREIREYLKGNICRCTGYHNIVKAIQAAAVAMRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A0</accession>
    <name>A0A2M9P8A0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001496">
        <property type="protein sequence ID" value="PJN93740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9843" checksum="30D1C1BDF6D37036" modified="2018-04-25" version="1" fragment="single">MIEALRLLFGAAERRFGVVGDHAKSQAVYTAVLAFFAVATLVFLLTLGTVALSQRFGPIVALSAMAGGCALCCFAVAILMRAERRKHDRADGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F4</accession>
    <name>A0A2M9P8F4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001418">
        <property type="protein sequence ID" value="PJN93827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="42"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="20196" checksum="3CBC6B5149F13941" modified="2018-04-25" version="1" fragment="single">MSTISPPHPPLRPGAPRHRRLRVVTALIIREMATKFGRSAGGYLWAILEPLGSILLLSIAFSFALRTPALGTSFILFYASGVIPFGMYRSMSQGVALAVRSNKGLLSYPVVTALDAVFAKFALNFLTTLVTATLLGAGIILGFGLHVNLDLAALISGRVPRGAAGAGGGDGQLRALRALSDLEERLERAEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M9</accession>
    <name>A0A2M9P8M9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type II toxin-antitoxin system RelE/ParE family toxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RelE toxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001367">
        <property type="protein sequence ID" value="PJN93895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.2310.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007712">
        <property type="entry name" value="RelE/ParE_toxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035093">
        <property type="entry name" value="RelE/ParE_toxin_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05016">
        <property type="entry name" value="ParE_toxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11451" checksum="26D7F4774FF986BF" modified="2018-04-25" version="1">MTRAVEWSRDALDDLKAQIAYIAAENPAAAQRVADRLRATGDALGEMPTGRPGRVAGTYEKSVTGLRYIIAYALTRRGDREILSILRVIHTARDWPDEEWPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N7</accession>
    <name>A0A2M9P8N7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001370">
        <property type="protein sequence ID" value="PJN93890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="158"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="28322" checksum="3EB315FCC1387732" modified="2018-04-25" version="1" fragment="single">MRLKIHVDLDYETEGLHAALLAIEAAELPDQHVVKSALDIEDPVSVVRVPADEGLGVRDWVQVRDRLTATYSAEVEIDRPVVDLPSLAQVPVHELPGEVVKFLMPSRYCQSDMFEDFVSSEFGTLTGGALVAVMRDWIEAKIEYVRGTSDEKTTVVDTFVKRQGICRDYAHLMTTFARAAQIPARCVSVYAPDVEPPDFHAVAEVYLEGGWRLVDATGMAAPDTIVRIGAGADAANIPFLILYGPNELKDQKVSVKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S2</accession>
    <name>A0A2M9P8S2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">LeuA_dimer domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_17480</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001329">
        <property type="protein sequence ID" value="PJN93933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00664"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013709">
        <property type="entry name" value="2-isopropylmalate_synth_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005675">
        <property type="entry name" value="Citramal_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036230">
        <property type="entry name" value="LeuA_allosteric_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43538">
        <property type="entry name" value="PTHR43538"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08502">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00917">
        <property type="entry name" value="LeuA_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110921">
        <property type="entry name" value="SSF110921"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="LeuA_dimer" evidence="5">
        <location>
            <begin position="132"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="10"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="31721" checksum="6BD99B073661E056" modified="2018-04-25" version="1" fragment="single">QGGAARQRDPQGSDHLRARAARGGGERPDHPDVRRGAQPRPGRGGALCRPSAFAHKAGLHASAILKDPTTYEHVPPEAVGNDRIIPMSNQAGLSNLRQRLTAAGIAVEPGDPRLAAILTEVKAREDRGFAYDGASASFELLARGMLGQLPRFFEVERYRVTVERRTNARGDTITVSEAVVVARFGEERVMSVSESQDPVTHADQGPVNALSRALAKDLGPYQDYISDMRLVDFRVRITSGGTEAVTRVSIDSEDGRGRLWSTVGVSANVVDPTSFQALQDAIVWKLLADGAPPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z8</accession>
    <name>A0A2M9P8Z8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001267">
        <property type="protein sequence ID" value="PJN94014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="233" mass="26188" checksum="BAD8316CEE8BB6D0" modified="2018-04-25" version="1" fragment="single">MKARHVTAVDKVFDEADRRMARRRGILLYEGDLADVRTFRNVRIAAASEVYVACGPDEVSLQVARSARRAIRRRPGSRVEVHVHLSNVRFLRDLEDAQDLAFDRNDGLETFSLKLEAARDLLVRTRLPQRARDSGRDRVHAVICGMGDQGEAALLELALGGHAAGMRPPRITVIDRDAERIEAEFRANYPELTDPSVVPDEARPAIRFKASEIRALDVENDLAWLWDEDAPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P911</accession>
    <name>A0A2M9P911_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001258">
        <property type="protein sequence ID" value="PJN94027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="110"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="114"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15924" checksum="DD4B489E1DC838F7" modified="2018-04-25" version="1">MGCTRVIHGSGLPDAELTFIPKRRRARYPSDLTDHQWAMIAPMIPDATSGGRPRKAGKRERAGCAWRLLLHDLLPWRTVYCYLRRWEREGVWADVLHTLVMADRERTGREASPSAAILDSQTVRTADQTYGPPRRQAVCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P915</accession>
    <name>A0A2M9P915_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001259">
        <property type="protein sequence ID" value="PJN94025.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94025.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="16652" checksum="A8443243D3CB4A0B" modified="2018-04-25" version="1" fragment="single">VEPDPQTDLDRAREQAGGQTGDVTVTLLWNGFSDLDLTVVCPDGSRLVAWEPPRCGGEIDDDANRCTSRSGGTGAQACNAYGGTQPLANPVENAFFVNDGAQRGAYKVQVRHYAGARRDPAAAVPFALQVRQGGESRVQRGSLANGETVTVTEFTIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D1</accession>
    <name>A0A2M9P9D1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-L-isoaspartate O-methyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">L-isoaspartyl protein carboxyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Protein L-isoaspartyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Protein-beta-aspartate methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16285</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001175">
        <property type="protein sequence ID" value="PJN94140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004719">
        <property type="term" value="F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PTHR11579"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00030757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00031323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00031350"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9678" checksum="FCD9F27D8B20ACA4" modified="2018-04-25" version="1" fragment="single">MIDFATAREAMVDGQVRPSDVTRYPIILAMLTVPREDYVPDALREVAYLGEHVPLARGRVVLDPRVFAKMLDALAVGPGDLVLDVGCGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G2</accession>
    <name>A0A2M9P9G2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001161">
        <property type="protein sequence ID" value="PJN94161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="7878" checksum="D64ED16F19EFB8D9" modified="2018-04-25" version="1">MSWERRRAVVLTSLAATVGFALFGLGVAVTVGLLCYFLVERLLAAGPAASCPARAARRSGGGVEPERETKSGAGSSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M3</accession>
    <name>A0A2M9P9M3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Methyltransferase</fullName>
            <ecNumber evidence="4">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15680</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the N(4)/N(6)-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01001102">
        <property type="protein sequence ID" value="PJN94240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="5">
        <location>
            <begin position="31"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="28385" checksum="7DD8E3CAA735E413" modified="2018-04-25" version="1" fragment="single">MRDQIHDTLALDVVIQGECLEVMARLPENSVDLIFADPPYNLQLKGELHRPDNSRVDAVDDAWDRFASFEEYDRFTRAWLAAARRLLKPDGAIWTIGSYHNVFRLGAALQDGGFWILNDVVWRKSNPMPNFRGKRLTNAHETMIWAAKSQSSKYVFNYEAMKALNDGVQMRSDWLIPLCTGSERLKGPDGTKAHPTQKPEALLHRVLVASTRPGDVVLDPFFGTGTTGAVAKRLGRRFVGIERETAYVKAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q5</accession>
    <name>A0A2M9P9Q5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Branched-chain alpha-keto acid dehydrogenase subunit E2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 2-oxoacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001076">
        <property type="protein sequence ID" value="PJN94277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.320.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006256">
        <property type="entry name" value="AcTrfase_Pyrv_DH_cplx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036625">
        <property type="entry name" value="E3-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004167">
        <property type="entry name" value="PSBD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43178:SF2">
        <property type="entry name" value="PTHR43178:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02817">
        <property type="entry name" value="E3_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47005">
        <property type="entry name" value="SSF47005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51826">
        <property type="entry name" value="PSBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripheral subunit-binding (PSBD)" evidence="2">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31525" checksum="3DD77673801A92F8" modified="2018-04-25" version="1" fragment="single">AFARQLGVDVSKVKGTGRKGRILREDISGFFKTAAAPAPAAAAAAPSGGMGIPPIPKVDFSKFGPVEDVEMPRIKKLSGPALHRSWLNIPHVTNNDEADITELDKFRKELDTKAKEDGYRVTMLTFLIKACVSALKAHWEVNSSIHPDGDKLIRKSFYNIGFAADTPNGLVVPVLKGADSKGLVEISKEIGELSSKARKGELKGPDMQGATFTISSLGGIGGTSFTPIVNAPEVAILGVSRSKMAPVWNGTEFAPRNMLPLSLSYDHRAIDGALAARFLVKLTTLLRDPRNLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V1</accession>
    <name>A0A2M9P9V1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Class I SAM-dependent DNA methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001051">
        <property type="protein sequence ID" value="PJN94316.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94316.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="345" mass="38859" checksum="20536DE639C76FDB" modified="2018-04-25" version="1" fragment="single">MTPQDFIAKWRAVELKERSAAQSHFNDLCRLLGLEDPTTADPRGDWFAFEKGAAKTSGGEGWADVWRKDCFAWEYKGRHRDLDAAFRQLLNYAVALENPPLLIASDMDRIVIRTHWTNTVQRETTLALDDLRDAAKRDLLRAAFTDPERWKPQKTRQSLTEDAAGRFINLAQRLRDRGHAPQRVAHFVNRLVFCMFAEDVGLLPDRLFMAMLEAARPDPAAFEGHARTLFAAMRSGGLVGFQRVDWFNGGLFDDDEALPLERADVGDLIAAARLDWSQIDPSILGTLFERGLDPAKRSQLGAHYTDRDKIMKSREPGRRRAGCWPSGAEARAGIEAALAREKAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V7</accession>
    <name>A0A2M9P9V7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Abasic site processing protein</fullName>
            <ecNumber evidence="7">3.4.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_15255</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the SOS response-associated peptidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.-.-" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01001054">
        <property type="protein sequence ID" value="PJN94312.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006974">
        <property type="term" value="P:cellular response to DNA damage stimulus"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018142">
        <property type="term" value="P:protein-DNA covalent cross-linking"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003738">
        <property type="entry name" value="SRAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036590">
        <property type="entry name" value="SRAP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13604">
        <property type="entry name" value="PTHR13604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02586">
        <property type="entry name" value="SRAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143081">
        <property type="entry name" value="SSF143081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0190">Covalent protein-DNA linkage</keyword>
    <keyword evidence="3" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 7" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94312.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="24857" checksum="8323F2EF97CE7CA4" modified="2018-04-25" version="1">MCNLYSMTRSQEAMRRLFAGLDDRAGNMPPLPGIYPDYPAPIVRNAREGRELVMARWGMPTPPQYLAGKKVDRGVTNIRQTGSSHWRPWLGPEHRCLVPFTSFAENETLADGSRPPVWFAFDESRPLAFFAGLWATWTSTRKVKEGPVTADLFGFLTTTPNAEVRAIHPKAMPAILTEPAEWETWLSAPWSEAKTLQRPLPDGALRIVLRGEKEDTVAPATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z3</accession>
    <name>A0A2M9P9Z3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AsnC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15020</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001031">
        <property type="protein sequence ID" value="PJN94353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="4"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16486" checksum="2555F7BFF90CFF64" modified="2018-04-25" version="1">MPQIDLIAEKILQELTRDGRISNLALSERVGLSPSACLRRVQDLERAGVIAGYRARIDRRALGRGFLAYVTVGLSTHTKAAQEGFERAMDAAPQVRECHNVTGAVEYLLRIEAADLDEYKAFHTDVLGTLPQVTSITTYVVIGSSKDERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA27</accession>
    <name>A0A2M9PA27_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001010">
        <property type="protein sequence ID" value="PJN94390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022254">
        <property type="entry name" value="DUF3775"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12616">
        <property type="entry name" value="DUF3775"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="27"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="28"/>
            <end position="42"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="15191" checksum="FB1DCDB39F668E79" modified="2018-04-25" version="1">MDELNLNPAFLRELILKLRAIMAQEEMVSPDSGSNPTDDEGAATLQDNPEDLTRDEISLAVDDLEPDQQAELVALMWIGRGDMEPEEWEEALEMAAERRDGPTSAYLLTHPHVADYLDEGLDKLLDGSDLMETGEY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA69</accession>
    <name>A0A2M9PA69_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Outer membrane protein assembly factor BamE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_14580</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000986">
        <property type="protein sequence ID" value="PJN94427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1450.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037873">
        <property type="entry name" value="BamE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007450">
        <property type="entry name" value="Lipoprotein_SmpA/OmlA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04355">
        <property type="entry name" value="SmpA_OmlA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014683376" evidence="2">
        <location>
            <begin position="25"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="SmpA_OmlA" evidence="3">
        <location>
            <begin position="31"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04355"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16287" checksum="7CDB177D17A7B799" modified="2018-04-25" version="1">MPSKALRSSAILALAFGLALGACAPTTQVHGYMPAPADVSRIRPGVDTAATVEEVLGLPSSTGLLRDTAWFYVESTFENYTYHRPRVIDRTVLVVNFNQTGTVTSVAKFGVEQGRIVELTARTTDTGGRQLGVVEQLFGNLLNLDAGKFGDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA92</accession>
    <name>A0A2M9PA92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000960">
        <property type="protein sequence ID" value="PJN94463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="29903" checksum="8A138A79ECEE52CB" modified="2018-04-25" version="1" fragment="single">PRPPARLSVTWRGWTGEMPVSSDADCAPFAGRNVLLTLSRDNPLDWIADWARFHAAEHGADAVLFLDNGSTAYSPQALVDTLAGVPGIEVVRVAVTDRPYGPLPLRGSKSRAMFLQTALLNLARARWLWRARAVLQCDVDELVVSKTGASVFDATAASRAGWIKFRGLWRAPMGDPEAMPRHADHYGVLDDAKPCPAKYCIVPAGRMRRHSWNVHNLDLVPFSGRFESGAFHYLHCRGITTRWKGEKSRNPLTARPADDAARALLARVFGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA96</accession>
    <name>A0A2M9PA96_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Tryptophan synthase subunit beta</fullName>
            <ecNumber evidence="6">4.2.1.20</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14415</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="3">Tetramer of two alpha and two beta chains.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TrpB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.20" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000967">
        <property type="protein sequence ID" value="PJN94452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004834">
        <property type="term" value="F:tryptophan synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006653">
        <property type="entry name" value="Trp_synth_b_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00168">
        <property type="entry name" value="TRP_SYNTHASE_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="5">
        <location>
            <begin position="61"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="230"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="230" mass="25767" checksum="B0EAFEDD3E635EF3" modified="2018-04-25" version="1" fragment="single">MPQPNSFRTGPDERGRFGIYGGRFVSETLMPLILDLEAEYERAKTDPTFWAEMDDLWTHYVGRPSPLYHAERLSERLGGAKIYFKRDELNHTGAHKINNVLGQIILARRMGKKRIIAETGAGQHGVATATVCAKFGLQCVVFMGATDVERQKPNVFRMKLLGAEVRPVTAGRGTLKDAMNEALRDWVTNVHDTFYCIGTVAGPHPYPAMVRDFQSIIGKETRAQMQAREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA97</accession>
    <name>A0A2M9PA97_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14430</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000969">
        <property type="protein sequence ID" value="PJN94449.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004334">
        <property type="term" value="F:fumarylacetoacetase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009072">
        <property type="term" value="P:aromatic amino acid family metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005959">
        <property type="entry name" value="Fumarylacetoacetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002877">
        <property type="entry name" value="RNA_MeTrfase_FtsJ_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43069">
        <property type="entry name" value="PTHR43069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01728">
        <property type="entry name" value="FtsJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0698">rRNA processing</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="3">
        <location>
            <begin position="50"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="domain" description="FtsJ" evidence="4">
        <location>
            <begin position="137"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94449.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="27812" checksum="14D47BB987623BA8" modified="2018-04-25" version="1" fragment="single">LNLWRKFLQKVECLLALQRWRARRALRRIARIADDGAADVGAMYRGAENALPVNWLSIPIGYNGRASSVVVSGTDFHRPWGQVKGPDDVLPRFAPSARLDLELEFGTIVGTPSKGMISVAEADDMIFGYVLLNDWSARDIQTWEYQPQVRAWLGGQADVVMSDMAAAASGHPQTDYMRIVALCEVAADLAEEVLAPGGVFVSKVLGGGAEPALVARLNKSFAKVAHVKPPASRKDSSEKFLVATGFRGAPKEPAPEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA5</accession>
    <name>A0A2M9PAA5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Transcription termination/antitermination protein NusG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14395</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Participates in transcription elongation, termination and antitermination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the NusG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000965">
        <property type="protein sequence ID" value="PJN94454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006645">
        <property type="entry name" value="NGN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043425">
        <property type="entry name" value="NusG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001062">
        <property type="entry name" value="Transcrpt_antiterm_NusG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265">
        <property type="entry name" value="PTHR30265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265:SF2">
        <property type="entry name" value="PTHR30265:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02357">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00338">
        <property type="entry name" value="NUSGTNSCPFCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82679">
        <property type="entry name" value="SSF82679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0804">Transcription</keyword>
    <keyword evidence="2 5" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="3 5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 5" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="NGN" evidence="6">
        <location>
            <begin position="40"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02357"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="20746" checksum="F38F977025ED92D6" modified="2018-04-25" version="1" fragment="single">RVKNEVYSILAAHLVPKCPHADLFNQRGRAWLRRREVVAWAPCLTKWVRAEVYRRTAKRVVRRPLLPGYVFVKLAEASAWQVIRGVSGVLGLVCLCGRPWPLRPADISRVRHASSRMRAREQDRAMPTNRAFEVGDMVEVLTGPFEAMSLRVYEITKGEARGLVSIFGRETEVQISVANLGAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ6</accession>
    <name>A0A2M9PAJ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000919">
        <property type="protein sequence ID" value="PJN94539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8004" checksum="F831240B7335768C" modified="2018-04-25" version="1">MPSGSLNARLAAFLARTRQADIRPVVWINPMPQPRWPVAFSRQLEAEVHVAAFALGHENLIAAVTVMREQAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP9</accession>
    <name>A0A2M9PAP9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13460</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000873">
        <property type="protein sequence ID" value="PJN94617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="91"/>
            <end position="301"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="43"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="37663" checksum="9D64816C7E3107D2" modified="2018-04-25" version="1" fragment="single">MLRPEDDDARKVEKLTLINQALIARMERMDEMRGSSYALTRTAAMLEREVMERNADLERALADLSAINVELASARELADEANRAKSRFLRAASHDLLQPLSAAKLFLSHLGETVETPMQTDLLGRITASFDSAEELIRALLDIARLDSQGFEANPGPVAIGRLFQRLTIDLQPLAAARRMDLRFVLSSESVLSDPVLLRQIAQNLIINALKYSTGRKVLVGLKRDAGGAWLTVQDTGPGIAPLDQERIFNEFERLSRSDVPGTGLGLSIVRRACQLLGHPLELISAPGRGSCFRVRLPLLRNVVRLETHEEDADEDEAAVGLIGRRVLVVENDPGMRQAFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS5</accession>
    <name>A0A2M9PAS5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">NADP-dependent malic enzyme</fullName>
            <ecNumber evidence="2">1.1.1.40</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.40" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000872">
        <property type="protein sequence ID" value="PJN94619.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004471">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004473">
        <property type="term" value="F:malate dehydrogenase (decarboxylating) (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008948">
        <property type="term" value="F:oxaloacetate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012301">
        <property type="entry name" value="Malic_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037062">
        <property type="entry name" value="Malic_N_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00390">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01274">
        <property type="entry name" value="malic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="malic" evidence="1">
        <location>
            <begin position="18"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94619.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13590" checksum="E9F910081710546D" modified="2018-04-25" version="1" fragment="single">MDELLAQAALEYHRYPNPGKIAVTPTKGMSNQRDLALAYSPGVAVPCLEIEKDPLKAYEYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGCLFKKFAGIDVFDIEVDETDPDKLVEIIAALEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS9</accession>
    <name>A0A2M9PAS9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Elongation factor Tu</fullName>
            <ecNumber evidence="2">3.6.5.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">tuf</name>
        <name evidence="2" type="ORF">CNY89_13290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.5.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000853">
        <property type="protein sequence ID" value="PJN94644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="1">
        <location>
            <begin position="10"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5191" checksum="AE288E6437878FD2" modified="2018-04-25" version="1" fragment="single">MAKAKFERNKPHVNVGTIGHVDHGKTSLTAAITKFFGEFKAYDQIDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV0</accession>
    <name>A0A2M9PAV0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000839">
        <property type="protein sequence ID" value="PJN94670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6491" checksum="F0028673017B18AF" modified="2018-04-25" version="1" fragment="single">RGGSALQSVAAGIGLSLLGMTAAAFGHLPPVRGALLQEVIDVAVILNALRALRIMPSADLRGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX5</accession>
    <name>A0A2M9PAX5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Rrf2 family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000831">
        <property type="protein sequence ID" value="PJN94684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10422" checksum="2DC9FA97A2A513CA" modified="2018-04-25" version="1" fragment="single">MKLSTKGRYAMIALTDLAAHGPDRLVALSEVAERQDISLAYLEQLFVKLRRAEIVESVRGPGGGYRLARPVEQIRISEVLAAVDETMDALARRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY3</accession>
    <name>A0A2M9PAY3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000832">
        <property type="protein sequence ID" value="PJN94682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8303" checksum="3674C5BB71CEE499" modified="2018-04-25" version="1" fragment="single">MDSYLPDGARNARPETISATIAYVDVFGAVHLAAERTERPQDADARRPVFSRNLWSRSLWRRLWGTTMAAALVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY7</accession>
    <name>A0A2M9PAY7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA ligase (NAD(+)) LigA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13030</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000830">
        <property type="protein sequence ID" value="PJN94685.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003911">
        <property type="term" value="F:DNA ligase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018239">
        <property type="entry name" value="DNA_ligase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013839">
        <property type="entry name" value="DNAligase_adenylation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013840">
        <property type="entry name" value="DNAligase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01653">
        <property type="entry name" value="DNA_ligase_aden"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00532">
        <property type="entry name" value="LIGANc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01055">
        <property type="entry name" value="DNA_LIGASE_N1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LIGANc" evidence="5">
        <location>
            <begin position="17"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="152"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94685.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21934" checksum="93EABC6DAC12814E" modified="2018-04-25" version="1" fragment="single">MDPAADLRPVDDLTPEAAQAELAVLAARILEADAAYHQADAPILDDAAYDALKRRNAAIEARFPELRRADSPSERVGAAPSETFAKVRHSRPMLSLENAFDPAEVTEFDARIRRFLGLGAEAPLAYLAEPKIDGLSLSLRYEDGRLVQAATRGDGETGENVTDNARTIPDLPDRLTGAPKVLEVRGEVYMSHAEFAALNARQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB37</accession>
    <name>A0A2M9PB37_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Methylenetetrahydrofolate--tRNA-(Uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_12625</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000792">
        <property type="protein sequence ID" value="PJN94751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047151">
        <property type="term" value="F:methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01037">
        <property type="entry name" value="TrmFO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020595">
        <property type="entry name" value="MnmG-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004417">
        <property type="entry name" value="TrmFO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806:SF2">
        <property type="entry name" value="PTHR11806:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00137">
        <property type="entry name" value="gid_trmFO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01281">
        <property type="entry name" value="GIDA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0274">FAD</keyword>
    <keyword evidence="4" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3 11" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="9" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0521">NADP</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0808">Transferase</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="10">
        <location>
            <begin position="5"/>
            <end position="371"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="371"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="371" mass="40445" checksum="C4C2F3AC6BC12328" modified="2018-04-25" version="1" fragment="single">MTRTIHIIGGGLAGSEAAFQAAEAGASVILHEMRPQTGTFAHQTAGLAELVCSNSFRSDDDENNAVGLLHWEMRAAGGLIMATADRHALPAGGALAVDREPFSAEITATLEAHPRITIDRTEIAAVPPADWDNVIIATGPLTSPALAEAIRALTDESALAFFDAIAPIVHFDTVDLSKAWFQSRYDKGETEEQRTAYLNCPMDRDQYEAFIDALLAAEKTEFKDWERDTPYFEGCLPIEVMAERGRETLRYGPLKPVGLTNPHDPTRKAHAVVQLRRDNALGTLYNLVGFQTKMKYAAQTEVFRTIPGLENAVFARLGGIHRNTFLNSPRLLDAQLRLKADPRLRFAGQITGVEGYVESAAMGLLAGRMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG2</accession>
    <name>A0A2M9PBG2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1320 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000723">
        <property type="protein sequence ID" value="PJN94870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009752">
        <property type="entry name" value="Phage_Mu_GpJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07030">
        <property type="entry name" value="DUF1320"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="109"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15924" checksum="F2D7D9D15DC9CDD1" modified="2018-04-25" version="1">MAYATQSDIVEIYGEHALVVADRNGDGTPDAAAITRALTAAADEIDSHLAVRYPLPLASTPGILRQLSVDVAVYRLAQTADVLTEEVRQRYEDAVAHLRRLAEGKAALVFPPSAPGEGEEPDPLDASPQPIVVAGPPRLFSRERMRDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH9</accession>
    <name>A0A2M9PBH9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ABC transmembrane type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_11775</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000711">
        <property type="protein sequence ID" value="PJN94885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="23"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="87"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="129"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="214"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="252"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="85"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="283"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="313"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="329" mass="35353" checksum="B8C1109D5CED32EE" modified="2018-04-25" version="1" fragment="single">MATGLALPSPLARVRDYVLSRHWTFLTGATLFAMILTLIVFAPWISGHDPAKQALLLRLKPPSAEHWLGTDNLGRDLFSRILHGGRFTVSIAAITVVLTVVIGTIVGVISGRKGGFVDDLLMRVVDLLLSVPDAIIAIFLVAIIGPGFGTLVLALTIVGWTPYARLARGLTMEVNSRDYIRAAEVLGMSRSYIVFRHVIPNMIRPISAVSFLRFGHKLITVGGLSFLGLGVQPPASDWGLMLADAQPFLERAPMLMIAPGLAIFLTALSVTWIGQGLEIDRRGPRALTDTSQPPARRLDPRSDQGSGSPSDGGRKGKSDRASVHDRAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX2</accession>
    <name>A0A2M9PBX2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000634">
        <property type="protein sequence ID" value="PJN95046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9705" checksum="D69DD2F4B0B59DAE" modified="2018-04-25" version="1" fragment="single">MSRTVSAPAGFEEEVLADFRNASVECVAGVDFLLEELATQDPDPDERCGLLALRHELYALRIPGCGRWRLLASIDRPAGPAGSTASPPPSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC09</accession>
    <name>A0A2M9PC09_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Branched-chain amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000616">
        <property type="protein sequence ID" value="PJN95081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014696189" evidence="1">
        <location>
            <begin position="27"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="30360" checksum="64E4DB31A19AE178" modified="2018-04-25" version="1" fragment="single">MLRIIGLSATLATALGAAAGMATATAKPMVQIPMAYLRQEVEAPPVLSNLDPIPEDLGIAGAEVAQKDTRTTGKFLGHDYSLEVVSVEPGGDLAAAAREALASSRVLFVDAPAEGILAVADLPEAQGALIFNVASGERRLRDADCRANVLHTIPEDAMRTDALMQTLLARRWTRTVLIVGPQPRDEAFAATLRASATKFGVKILAEKAWPFENDLRRTAGAEIPVFTQDFPDHDVLLIADETDDFARYVADNTWLPRPIAGSDGLRGEGWAPVLEQWAAVQLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC34</accession>
    <name>A0A2M9PC34_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AAA_31 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10385</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000597">
        <property type="protein sequence ID" value="PJN95115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="2">
        <location>
            <begin position="31"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="265" mass="28692" checksum="DD89742F86185967" modified="2018-04-25" version="1" fragment="single">QATTTAKARSFGRSADVGSWRSPSQAMNPPRPKVLLVDFDPQGNASTGLGINAHARRFTAYDLLFNPDPDGLPANETVVPGLDVIPATNDLASADVNMVADPRRNYKMRDILRDHADLFASYDHVLIDCPPSLSLMTVNALVAADSVLVPLQCEFFALEGLSQLIRTVQSVRNASNPGLKIQGIVLTMYDKRNNLSAQVAADVRENLGGMVYETMIPRNVRLSEAPSHALPALIYDRTSAGAVAYQKLAAEILAQLRRDRATVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC91</accession>
    <name>A0A2M9PC91_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD(FAD)-dependent dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000578">
        <property type="protein sequence ID" value="PJN95159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015904">
        <property type="entry name" value="Sulphide_quinone_reductase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10632">
        <property type="entry name" value="PTHR10632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="400" mass="43655" checksum="97984E1A31745149" modified="2018-04-25" version="1" fragment="single">AGIAVAASLRARKPDLDVAIIDPADIHYYQPGWTMVGAGVFAPEDTARTMGSLIPRGVKWIKAAVAAFEPENDAVILDGCRVVRYGRLVVCPGLKLDWDAIEGLNETLGRNGVTSNYRYDLAPYTWELTRGFAGGHAVFTQPQMPIKCAGAPQKAMYLCADHWRRAGVLDAARIDFMNAGGVLFGVKDYVPALMEYVERYRARLNFFHNLVAIDGSGKVAIFEVKAPETAARRIEVPFDMIHVCPPQVAPDFIRVSPLADAAGWVDVDPHTLRHRTWANVWSLGDAMNAPNAKTAAAARKQAPTVAENLMADMAGRGAAAQYDGYGSCPLTVERGRIVLAEFGYGGALKPSFPAWLVDGTRPSRLAWLLKERLLPPVYWRGMLRGREWMAKPEPVAAPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC2</accession>
    <name>A0A2M9PCC2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000576">
        <property type="protein sequence ID" value="PJN95164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8843" checksum="DEA4F66A987489A1" modified="2018-04-25" version="1">MSENTDLPALPVWQARSFWLQIIGAVTAIGAATGFDLLGHLGVPNEGALADHVMQVVSVVAFALSWRERRAPNYRLTLRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF8</accession>
    <name>A0A2M9PCF8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">F0F1 ATP synthase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">atpD</name>
        <name evidence="12" type="ORF">CNY89_09850</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ATPase alpha/beta chains family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000556">
        <property type="protein sequence ID" value="PJN95208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01347">
        <property type="entry name" value="ATP_synth_beta_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005722">
        <property type="entry name" value="ATP_synth_F1_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020003">
        <property type="entry name" value="ATPase_a/bsu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004100">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036121">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024034">
        <property type="entry name" value="ATPase_F1/V1_b/a_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02874">
        <property type="entry name" value="ATP-synt_ab_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50615">
        <property type="entry name" value="SSF50615"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01039">
        <property type="entry name" value="atpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00152">
        <property type="entry name" value="ATPASE_ALPHA_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0139">CF(1)</keyword>
    <keyword evidence="4" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="AAA" evidence="11">
        <location>
            <begin position="145"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="455" mass="48729" checksum="3DE1E47B766BD1E7" modified="2018-04-25" version="1" fragment="single">MATIATGKITQIIGAVVDVQFEDGHLPEILNALETDNNGVPLVLEVAQHLGESTVRAVAMAATEGLVRGHPVSDTGGPITVPVGRGTLGRILNVIGAPVDEKGPVETEESRPIHRAAPEFAEQSTEKEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNVAKVHSGYSVFAGVGERTREGNDLYHEFIESGVIDEHDLQKSKVALVFGQMNEPPGARMRVALTGLTMAEQFRDESGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQLQERITSTRNGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQVVGEDHYQTARAVQGILQRYKSLQDIIAILGMDELSEEDKTVVARARKIQRFLSQPFDVAQVFTGSPGVQVPIEVTIDSFKRVVAGEFDHLPESAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK8</accession>
    <name>A0A2M9PCK8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000536">
        <property type="protein sequence ID" value="PJN95242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17136" checksum="349C477C605E7E56" modified="2018-04-25" version="1">MTKTYSNRSNATRAAKKDIAGSMAAGHPDVWFEIVEQGRGAWTYVIRGIADEEPAVNHEGDATPTAEDDTAMDMEPAATPVNPEPVAEAAPARARQNGILYPVAGTVAHAIWALAQGFADANGREAKPGDLKDQAEAAGINLASLGCGMGHRRKFLGIAKQRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL0</accession>
    <name>A0A2M9PCL0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lytic transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000516">
        <property type="protein sequence ID" value="PJN95287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="2">
        <location>
            <begin position="82"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="21089" checksum="3D775500B5778AFD" modified="2018-04-25" version="1">MRRIGVALGLGLLMCGPAGAEVPLSRLLSNSSNLSSDYRSLIRPPVPGALKASRGGRRAIAADAADWAIPRYYGSSGQYQEMARAAARKHNVPEDLFLRLVRQESNFRPAAVSSKGAIGLSQLMPGTARAMRVNPHDPKENLEGGARYLSMQYRKFGDWRLALAAYNAGPGAVEKHGGVPPYAETQQYVKKILGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP8</accession>
    <name>A0A2M9PCP8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Universal stress protein UspA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000504">
        <property type="protein sequence ID" value="PJN95319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="40" mass="4085" checksum="65E2A6B9ACA0D05A" modified="2018-04-25" version="1" fragment="single">MTGKLIALVDASAHARSVCDHAAWAAARTASAVEILHVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV4</accession>
    <name>A0A2M9PCV4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000488">
        <property type="protein sequence ID" value="PJN95353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8808" checksum="FD4712AE1043913F" modified="2018-04-25" version="1">MRRSPGTDGLLERNHLHGLEGDAVNAILCAVDYNCRLLLAWFRRLLACLITAMPSIAAGFLCAIAAIIKPPQAQTRYTQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD43</accession>
    <name>A0A2M9PD43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Methylmalonyl-CoA epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">mce</name>
        <name evidence="3" type="ORF">CNY89_08485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the methylmalonyl-CoA epimerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000451">
        <property type="protein sequence ID" value="PJN95438.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd07249">
        <property type="entry name" value="MMCE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017515">
        <property type="entry name" value="MeMalonyl-CoA_epimerase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03081">
        <property type="entry name" value="metmalonyl_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="2">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009308"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95438.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14379" checksum="D7B78219E077F43B" modified="2018-04-25" version="1">MIGRLNHVAIAVPDLEAAAAQYRDTLGALVRDPQPEPTHGVTVVFIELPNTKIELLHPLGENSPIRAFLDKNPSGGIHHICYEVDDILAARDALKASGARVLGDGEPKIGAHGKPVLFLHPKDFTGTLVELEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP3</accession>
    <name>A0A2M9PDP3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000352">
        <property type="protein sequence ID" value="PJN95671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="1">
        <location>
            <begin position="3"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9505" checksum="DB1CCA52335976C7" modified="2018-04-25" version="1" fragment="single">SLRARGGFGANNGDLLARLAVNGEGIALLPRFIVEEDLRAGRLVEVLPDWSAPTIHLTLYYPPYAHLPLRVATFSDFFEAHVAEGMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR4</accession>
    <name>A0A2M9PDR4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000344">
        <property type="protein sequence ID" value="PJN95690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="26"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7884" checksum="30FCC7477ABE8600" modified="2018-04-25" version="1" fragment="single">MTGPRVEAPALTVAGVSHRFGAVAALSDVSFDVPRGSFTALLGVNGAGKTTLFSLITRLYDSTSGRIEVAGFDARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS4</accession>
    <name>A0A2M9PDS4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HTH araC/xylS-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06930</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000340">
        <property type="protein sequence ID" value="PJN95701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="4">
        <location>
            <begin position="236"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="373" mass="39608" checksum="52C824FF8DB65A48" modified="2018-04-25" version="1" fragment="single">MDAHVIPYRQRATILAQLPPLLDELGVPLAPVLDGTGISPEDLVPGAFVPYAGMLAALDRAAELSGREDLGILLARRQSLAALGPAGQVMRHAGTLGDALSDYARFQIWNSTGAAAYIYRTPEEFVFGYGIYDPAGAHAVQIHDLALAAGCVLIFILTESRAQPLEICSMRPPPDDPAPLARFAGCTVRYGQAHTCISLSPAAADIPLPDADAAAHAAALAHLAERTASGSWGPAAAVRHALCAAITRGRLGMPEIAAQIHQHPRTLRRALEREGTTFTALRDEVRYAVARELLSLTPLPVGDVAAALNFADNSAFTHAFHLWSGTSPSEWRSAKLTATVTGLPPGKFSNRIRQAGDWGLLTRRVHGSLRVGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ3</accession>
    <name>A0A2M9PDZ3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">SHMT domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_06530</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; glycine biosynthesis; glycine from L-serine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the SHMT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000310">
        <property type="protein sequence ID" value="PJN95775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00288">
        <property type="reaction ID" value="UER01023"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004372">
        <property type="term" value="F:glycine hydroxymethyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019264">
        <property type="term" value="P:glycine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001085">
        <property type="entry name" value="Ser_HO-MeTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019798">
        <property type="entry name" value="Ser_HO-MeTrfase_PLP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039429">
        <property type="entry name" value="SHMT-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11680">
        <property type="entry name" value="PTHR11680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00464">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00096">
        <property type="entry name" value="SHMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="6" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SHMT" evidence="8">
        <location>
            <begin position="6"/>
            <end position="215"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="216"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="255"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00006376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="374" mass="40479" checksum="1AEE3B21BA944396" modified="2018-04-25" version="1">MFGAAFANVQPHSGAQANQAVFLALLQPGDRIMGMNLAHGGHLTHGSPVTMSGKWFDVVSYEVREDNQRIDMDAVRARALETKPKLIIAGASAYPREIDFAGFRAIADEVGAYLMVDMAHYAGLIAAGKYPNPVPHAHVVTSTTHKTLRGPRGGVILTNDEALAKKLNSAVFPGNQGGPLMHVIAAKAVAFGEALQPSFKDYAGQVIANARALAAAPAGGRARHRLGRHRLPHGPRRPAPEGGQGPRRRAGAGARRAHLQQERDPLRSGKALRDLGRAPRDLRRNHPRLRDVRVHPRRRAGPEGGLRPRRRRPGGRRRRGGRSAGGGPDPLRRASDLRRLRPQQSLHGSFPAVNAAGNIQPDQRLDPRITRETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE47</accession>
    <name>A0A2M9PE47_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000306">
        <property type="protein sequence ID" value="PJN95788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="15"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="52"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8572" checksum="0D8D6DA59687DC92" modified="2018-04-25" version="1" fragment="single">ARASAGAQELVQAYEARKKGRERHQARMANMGRRSTLGGDFEAAQAGSLQFSRERRRQRAEARTADRSTSDKAKAPPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE50</accession>
    <name>A0A2M9PE50_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000291">
        <property type="protein sequence ID" value="PJN95827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="12"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13838" checksum="6F00E21889889B82" modified="2018-04-25" version="1">MATEDPQFHAGCPNRELFDQLADKWSMMTLAVLDAGPLRFNAIRRRLEGVTQRALTQSLRRLERNGLIERRVIASSPVAVEYEITPLGRTLQAPYQALYAWTQAHCGQVEEARAVFDQRKPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE75</accession>
    <name>A0A2M9PE75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06100</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000285">
        <property type="protein sequence ID" value="PJN95846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005021">
        <property type="entry name" value="Terminase_largesu_Lambdalike"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41287">
        <property type="entry name" value="PTHR41287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03354">
        <property type="entry name" value="Terminase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="308" mass="34157" checksum="44671A88402BE261" modified="2018-04-25" version="1" fragment="single">QKGEIEDPATLPVIFMAEEGDDWTDEALWHAVNPGLAHGYPDLAAFRDKAAKAVHSPMDRDSFLQFNLNRWLDASTSPFVEMSAWDACAGEVDLEDLEARQVPCWLGVDLSKNEDLTVIVACWRDGDDLKMWAWFFCPEDNLRARSERHGVDYAAWAAEGFITPTPGNTVDLRAVEDKIRELAAAHSVREVAFDPTYARVMMADLQEDGIEAVEFRQGWVSMAPAVKEFERVILAGELRHGGHPVLRWNIANVQIETDKAGNRTMHKGKSGNKIDGAVAAAMAVARAAMGEEASVYDADWFTEEMGSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE83</accession>
    <name>A0A2M9PE83_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06090</name>
        <name evidence="1" type="ORF">CNY89_29640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004497">
        <property type="protein sequence ID" value="PJN92446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000284">
        <property type="protein sequence ID" value="PJN95851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010466">
        <property type="entry name" value="DUF1058"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06347">
        <property type="entry name" value="SH3_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6049" checksum="2CEBC6D42CD468D1" modified="2018-04-25" version="1" fragment="single">AEPSEAAQIRAFAEPGVIARVERCPSAWCELEVEGIKGWAPRDVLWGLDPDEVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH7</accession>
    <name>A0A2M9PEH7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000249">
        <property type="protein sequence ID" value="PJN95945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7294" checksum="7F3503D412B40546" modified="2018-04-25" version="1" fragment="single">MRRMIDGEITGTIGRIVLDRPEAHNALDQAAMRALRGLLEDWTGRDLRAVILTGRGRSFCAGASLGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV3</accession>
    <name>A0A2M9PEV3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04755</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000207">
        <property type="protein sequence ID" value="PJN96069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014605">
        <property type="entry name" value="Sig_resp-reg_PhyR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036400">
        <property type="entry name" value="RR_Ctr_UCP036400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="141"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="265" mass="28773" checksum="75F7E18218C39098" modified="2018-04-25" version="1">MSLSTRIAPHLTYLRRYSRAITGSQTSGDAYVRALLEMLIADISIFPQSSSDRIAVFKLYAASFGDLQVAIDPSPSAFSWEQRAARNLSQVSSRARQAFLLTALEGFGPAEIAEILDVNQTQAADLLRQASEEISRQVATDILIIEDEPLIAMDIEQMVLSLGHRVTGIARTKTEALELYRADQPGMVLADIQLADGSSGIDAVNEILARTALPVIFITAFPESLLTGERPEPAFLVTKPFNEDMVKALISQALFFNDAAEAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW8</accession>
    <name>A0A2M9PEW8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000194">
        <property type="protein sequence ID" value="PJN96107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046130">
        <property type="entry name" value="DUF6127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19622">
        <property type="entry name" value="DUF6127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="68"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10226" checksum="ED2A0EA16B3510D2" modified="2018-04-25" version="1">MNPPRSEGFVRMPDAEFEAILTRAAEEGAKRALADVGLDGDEAALDIRDLRSLVDCIRLVRRTAMQTAVRMITTGVMLALLAGIAIKLKIFGGSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX9</accession>
    <name>A0A2M9PEX9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Fe-S cluster assembly protein SufB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04425</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0051 (ycf24) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000190">
        <property type="protein sequence ID" value="PJN96120.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010231">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000825">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037284">
        <property type="entry name" value="SUF_FeS_clus_asmbl_SufBD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045595">
        <property type="entry name" value="SufBD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01458">
        <property type="entry name" value="SUFBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19295">
        <property type="entry name" value="SufBD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101960">
        <property type="entry name" value="SSF101960"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01980">
        <property type="entry name" value="sufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SufBD_N" evidence="2">
        <location>
            <begin position="169"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF19295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96120.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="505" mass="56009" checksum="898AA49C0858A427" modified="2018-04-25" version="1">MAAFEEIREGVDQETVDTVRSVGEKYKYGFSSDIDTEYAPKGLNADIVRLISEKNGEPQWMTDWRLKAYERWLTLSEPKWAMLNYPEIDFQDQYYFARPKSFATRPKSLDEVDPDLLATYAKLGIPLREQAILAGVEGAEGLPVEGRKVAVDAVFDSVSLGTTFKDELAKAGVIFCPISEAVRDHPELVKKYLGSVVPVSDNFYATLNSAVFSDGSFVYVPPGVRCPMELSTYFRINAENTGQFERTLIIADKGSYVSYLEGCTAPKRDEHQLHAAVVEIVILEDAEVKYSTVQNWYPGDENGVGGIYNFVTKRADCREARAKVMWTQVETGSAITWKYPSCLLRGEGSSGEFYSIAIANNHQQADTGTKMVHLGKNTRSRIVSKGISAGVAQNTYRGLVSMHPKATNSRNYTQCDSLLIGDRCGAHTVPYIEVKNTSSRVEHEATTSKVDEDQLFYCRSRGIGEEEAVALVVNGFCREVLQALPMEFAMEAQKLVAISLEGSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF35</accession>
    <name>A0A2M9PF35_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">50S ribosomal protein L27</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpmA</name>
        <name evidence="7" type="ORF">CNY89_04305</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL27 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000184">
        <property type="protein sequence ID" value="PJN96141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00539">
        <property type="entry name" value="Ribosomal_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001684">
        <property type="entry name" value="Ribosomal_L27"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018261">
        <property type="entry name" value="Ribosomal_L27_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15893">
        <property type="entry name" value="PTHR15893"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01016">
        <property type="entry name" value="Ribosomal_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00063">
        <property type="entry name" value="RIBOSOMALL27"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00062">
        <property type="entry name" value="L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00831">
        <property type="entry name" value="RIBOSOMAL_L27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029549"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9354" checksum="401311052DD0C688" modified="2018-04-25" version="1">MAHKKAGGSSRNGRDSAGRRLGVKKFGGEAVIPGNILVRQRGTKFWPGAGVGLGRDHTIFAVAEGKVEFHKGLKGRTFISVITPALAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF68</accession>
    <name>A0A2M9PF68_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">F0F1 ATP synthase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000174">
        <property type="protein sequence ID" value="PJN96176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032820">
        <property type="entry name" value="ATPase_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09527">
        <property type="entry name" value="ATPase_gene1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="71"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="112"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13884" checksum="B0AA9865D3D433C6" modified="2018-04-25" version="1">MSEDPFSERLKRLEDRIEKARRVHEPAPSRAGQKFTQSSIAWRMVTELVAGMILGLGLGWGLDSLFGTRPVFLVIFALLGFAAGIRTMMRTAAEVKEGRSEGALMRPGPRQDPGVKPDEERGTDGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF86</accession>
    <name>A0A2M9PF86_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000168">
        <property type="protein sequence ID" value="PJN96198.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="2">
        <location>
            <begin position="75"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="197"/>
            <end position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96198.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="386" mass="41978" checksum="04B857BE4EEEB490" modified="2018-04-25" version="1">MKLALVAPTFNAVSETFIADHVRTLAPEATVLVTRDSLGSEKYGVPVLSQVGPDYTTFGAFDERAKTLLYKARRRFGPPLGFDDRMRVMAFFKEQGVDRVLGEFGYAAVQVMEVCAALNIPLYVYFRGNDASATITHGLMRKRYAQLFKQVKGVFCVSRALADRIVAIGCPREIITINPSGVNIADFPPGDPQPGRLVAVGRLVDKKAPHLTLDAFGRIAARHPQAHLDLIGDGPLLGRCREMIARHGIANQVTLHGALPHAKVRDVMRPASIFVQHSVTAPNGDIEGFPTAIAEAMSAELCVVSTRHSGIPEHVLDGRTGLVVDEHDVEGMAAAIDRTLSDPELARSLGRAARLHAMEHLDRERSRQRVRDALGLPAPTTVPQAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF98</accession>
    <name>A0A2M9PF98_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Trigger factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000169">
        <property type="protein sequence ID" value="PJN96192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045632">
        <property type="entry name" value="DUF6314"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19834">
        <property type="entry name" value="DUF6314"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6314" evidence="1">
        <location>
            <begin position="6"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="15640" checksum="EFDEB319F9356B9B" modified="2018-04-25" version="1">MRLAEFEGLWRIVREIEDLTGGPAGRLTGTARFSPDGPGMVYDEAGVLRLGDGPAFHATRRYLWRETAEGIELRFADGRFFHRFARDAPEAEHPCGADLYRVRYDFARWPEWRSEWRVRGPRKDYVMRTRYSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM7</accession>
    <name>A0A2M9PFM7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000128">
        <property type="protein sequence ID" value="PJN96329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="313" mass="33904" checksum="63CF791B1BBB16C0" modified="2018-04-25" version="1">MNLRQLRYFAQTVEAGNITRAAEQLHVAQPALGLQIRQLEEELGVPLLIRHSRGVSATDAGKILHERAREILRQVEMARQEVMAGGGPSAESITLGLTPGLGKLFGAGLMMRVRSDMEGVSLSVVEEMSFVLIDAIERDEIHLALAYEVPDRTGLARVPLLDEELLFVTAASDETGPIAFAEVLDHTLALAGERDHVYQLVLRSAEAIGRTPKVGFEASSVGIMKSLVMEGSVASVMPFGSVIGEMGRGELTGRRIEGGDLVRTLYLLHSLRRPPLIHEAELAELIKLQIRSALGRVAPMVVPREGLTAVEAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU7</accession>
    <name>A0A2M9PFU7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="74"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11466" checksum="BCDDE32DDEBE723C" modified="2018-04-25" version="1">MTPPKPLTAEETAAVEVAIAAGRLQRIPLGVYAEDTITPVPLAEQIRRSANAGKSRVAAHNRRIAQEAAARREKAARLSAKGLTRSEIAERLGVTRSVVSQYLGAVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ5</accession>
    <name>A0A2M9PFZ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7 8">Transcription elongation factor GreA</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Transcript cleavage factor GreA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">greA</name>
        <name evidence="11" type="ORF">CNY89_02290</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6 7 8">Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the GreA/GreB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000086">
        <property type="protein sequence ID" value="PJN96477.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070063">
        <property type="term" value="F:RNA polymerase binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00105">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018151">
        <property type="entry name" value="TF_GreA/GreB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006359">
        <property type="entry name" value="Tscrpt_elong_fac_GreA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028624">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023459">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022691">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036805">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30437">
        <property type="entry name" value="PTHR30437"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03449">
        <property type="entry name" value="GreA_GreB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006092">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46557">
        <property type="entry name" value="SSF46557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01462">
        <property type="entry name" value="greA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00829">
        <property type="entry name" value="GREAB_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7 8" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="GreA_GreB_N" evidence="10">
        <location>
            <begin position="4"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="GreA_GreB" evidence="9">
        <location>
            <begin position="84"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008213"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00105"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000556"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96477.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="17470" checksum="6883C233A31AD7CD" modified="2018-04-25" version="1">MEKVPLTQRGFTKLDAELKRLKTIDRPEIIRAIAEAREHGDLSENAEYHAARERQSFVEGRIKELESMIARSEIIDVARLSGPIKFGATVTLLDEDTEEEKTYQIVGEPEASIEQGLLNMMSPLARALIGKEEGDSVEVRTPGGVRSYEIRTIAFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA1</accession>
    <name>A0A2M9PGA1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">PQQ-dependent dehydrogenase, methanol/ethanol family</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_01720</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the bacterial PQQ dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000062">
        <property type="protein sequence ID" value="PJN96578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018391">
        <property type="entry name" value="PQQ_beta_propeller_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017512">
        <property type="entry name" value="PQQ_MeOH/EtOH_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002372">
        <property type="entry name" value="PQQ_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011047">
        <property type="entry name" value="Quinoprotein_ADH-like_supfam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01011">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13360">
        <property type="entry name" value="PQQ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00564">
        <property type="entry name" value="PQQ"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50998">
        <property type="entry name" value="SSF50998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03075">
        <property type="entry name" value="PQQ_enz_alc_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0106">Calcium</keyword>
    <keyword evidence="4 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 8" id="KW-0634">PQQ</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="10">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014838536" evidence="10">
        <location>
            <begin position="22"/>
            <end position="577"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="7">
        <location>
            <position position="317"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="147"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="191"/>
        </location>
        <ligand>
            <name>pyrroloquinoline quinone</name>
            <dbReference type="ChEBI" id="CHEBI:58442"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="209"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="317"/>
        </location>
        <ligand>
            <name>Ca(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29108"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022891"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR617512-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="577" mass="62503" checksum="4AA33447BA69B6D1" modified="2018-04-25" version="1">MALRPLLATVSAAAFAIGSLAAAGEVSNYAPVTAERLANPEPGNWLSIRRTYDGQSHSPLDQIDASNVKDLKVVWNSTTGPRQKLTDFAALPADPANQAPPLVNGDVMIYSAGDNQVIAYETKTGAEIWRFAYALPEGLVPVHPTNRGVALWGDKVYLATLDAHLVALDAKTGTKVWDKTLANWEEGYYSTLAPLIVDGTVMSGVSGGEFGIRGFVEAFDAETGESVWKTYTIPSPDEPGGDTWPGDTWQRGGGPIWITGNYDQTNKLTYWGTGNAAPWVGALRPGDNLHTASVLGVDPKTGKIVTHFQYHHNDTWDWDETVAPVLVDLDGKQLAVKFARNGYVYKLDREDGQISFVEGKPYVFQNVFTGLDPKTGRPSYDPERLGQLGKRVEFCPSAWGGRDWVGESIDPSMGYAFISVNENHCGAMEAAEVEYEPGVLYLGSGLEMTPTEAAKDHIGAIQAWDLRKMEKVWQTNFKSPNWGPILSTSGGLIFAGGTNDAEFRAFDAKTGEVVWSQRLDGGVVAQPIAFEADGKEYIAVATGWGVDAGRFQGFIDQAWGTKTEVPLGGSIWVFALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK7</accession>
    <name>A0A2M9PGK7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14622" checksum="8E566E92FD370B25" modified="2018-04-25" version="1">MRMDLSDIAGNIADQDRGRELEIVNPATGEPIGIKFRVAGPDSETQHRARLKLADDLAEMADDEGRVTAEQREKARIACLARCVLGWEIEEDGQPLPFTHKNALRVLSMALWLQVQVDAFASDRRAFMGDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ7</accession>
    <name>A0A2M9PGQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Dicarboxylate/amino acid:cation symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00800</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000025">
        <property type="protein sequence ID" value="PJN96735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="196"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="223"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="336"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="361"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="450" mass="46729" checksum="048AB58DD5CC0743" modified="2018-04-25" version="1">MTEAAKTGGGSSLTTKIMVAMALGVATGLIFNRIGSPFIDEQIVGGLFAMIGKMFVNALKMLVVPLVIFSLLTGVMGIGDIRALGRVGGRAFVLYILTTAIAIAVAIGIALITGPGEGFVMEGVAAGDISGAAAPSVWEVFANIVPGNPITAFSTGDMLQIIFYVIVVGIAAVMLGERSLPFARACEYMNELMMKVVSIVMLFAPYGVFCLIAKTFAEQGIDLFLPVLTYVGTLVGALLLHLFVTLMVILKLMSGLSPMPFLRKIRPAQIFAFSTASSNATIPVTMRCVTARMGVDNSVASFTVPFGATINMDGTAIMQGVATVFLANVYGIDLGVGGYLTVIAMAVLASIGTAGVPGVGLVMLTMVLTQVGLPIEGIALILGVDRLMDMIRTAVNITGDAVVSVIVAKSENKIDLDAYADPDAGLVETLAIDHDAEAALAAEARPHPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS0</accession>
    <name>A0A2M9PGS0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MerR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00845</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000027">
        <property type="protein sequence ID" value="PJN96730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="2">
        <location>
            <begin position="34"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="23480" checksum="B96171B64A7EFF9D" modified="2018-04-25" version="1">MADTSGDPVGSGQDPHAVRGPRENNLEQAIGLEVRGLRKQLGLTVTDISAATGISVGMLSKIENGNISPSLTTLQALSRALGVPVTSLFRRFEEPRSAVFVKAGEGVEMERRGTRAGHQYNLLGHIAATASGVQVEPYLITLTTESDTFPTFQHEGLEFLYMLEGEVAYRHGDQVFTLRPGDSLFFDADAPHGPERLVTLPARYLSIISYARPTRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU3</accession>
    <name>A0A2M9PGU3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11726" checksum="17762E33239410CD" modified="2018-04-25" version="1">MARGEATFQANGQAWTLRFSNNAICKAEEEFKQPFGEIVAGLGGSGFRFQTFRTLFRLGLSHHHAAATDEAAGDLIDEIGMTEALRITVESIKAAMPAAKAAGAGEEPAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH02</accession>
    <name>A0A2M9PH02_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">YlxR domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00279">
        <property type="entry name" value="YlxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007393">
        <property type="entry name" value="DUF448"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029064">
        <property type="entry name" value="L30e-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037465">
        <property type="entry name" value="YlxR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035931">
        <property type="entry name" value="YlxR-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34215">
        <property type="entry name" value="PTHR34215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04296">
        <property type="entry name" value="YlxR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55315">
        <property type="entry name" value="SSF55315"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64376">
        <property type="entry name" value="SSF64376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YlxR" evidence="2">
        <location>
            <begin position="15"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="197"/>
            <end position="229"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="23597" checksum="8A43D8177850DD60" modified="2018-04-25" version="1">MTRGGRVKDRDEPERRCIVTRTSGPKAALIRFVVGPEGEVVPDLAGKLPGRGFYVAADRATLDKAAAKGHFARAARQPVRAPADLAARIEAGLVTRVLDLIALARKAGVAVAGLEKTKAALVSGGAALLVQAADGSARGRAALRPPEGDETLVSCLSAHEMGLAFARDSVIHAAVLKSGLAGRIQDEARRLAGLRGGDFEGKGFGAPPADAPVDDGAGEGSRPERQTTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH44</accession>
    <name>A0A2M9PH44_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00245</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000006">
        <property type="protein sequence ID" value="PJN96841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="222"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="299"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="35558" checksum="E2C8AC455955900E" modified="2018-04-25" version="1">MSVTLLNLIEVVLNGLMVGVLYSLVALGFVLIFKASGIFNYAQGVMALFAALTLVGLQSGQIPFSHLINATFGTNLHHFGWELPAIVALALTVLVMAVLAILVERLLLRHLVNQEPIILFMATIGLAYFLEGLGDLMWGADIKAVDVGLPKGGSLWFEDLTKGWAAEGSDYWGMYVDKLDVAAAVIAALLVVALTLFSQYTRTGRALRAVADDHQAALSVGISLRAIWVITWTIAGVVALVAGVMWGAKTGVQFSLSLIALKALPVLILGGFTSIPGAIVGGLIIGVGEKLFEFSIGPMIGGATENWFAYVLALVFLMFRPQGLFGERLIERV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH59</accession>
    <name>A0A2M9PH59_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF5681 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00050</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043736">
        <property type="entry name" value="DUF5681"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18932">
        <property type="entry name" value="DUF5681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF5681" evidence="2">
        <location>
            <begin position="8"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11130" checksum="87A74C58A824827D" modified="2018-04-25" version="1">MPTPPPPEHTRFAPGQSGNPGGKTSAQRKLEIANAERATRIRAAMLAKIEAMIDPNTGEFMDELSADLNTFLRDSENRGLGAPKQTTELEGNVSVRTIKLIGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C7</accession>
    <name>A0A2M9P4C7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30290</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004744">
        <property type="protein sequence ID" value="PJN92373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7564" checksum="9397167CFCE0F9C5" modified="2018-04-25" version="1" fragment="single">MPRAYIAMIFSSSPSIRVWPLPIRRGSKLPSPIARHLDLERAVLALQRLAADPVPPVRLHRRAASPCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F5</accession>
    <name>A0A2M9P4F5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DDE_Tnp_Tn3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_29980</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004634">
        <property type="protein sequence ID" value="PJN92410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="4"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8016" checksum="04ADEDF2CECBD1BE" modified="2018-04-25" version="1" fragment="single">GHVSTYDDQQHRAAGCNLVVAAITLWNTVYLAAAVEALRRSGVDVPDDLLRHVWPLGWDHVTLTGDYRWSAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K1</accession>
    <name>A0A2M9P4K1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004431">
        <property type="protein sequence ID" value="PJN92467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022623">
        <property type="entry name" value="Glyco_trans_4_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12000">
        <property type="entry name" value="Glyco_trans_4_3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_4_3" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_4_3" evidence="1">
        <location>
            <begin position="42"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8796" checksum="E53E3D766FCA7071" modified="2018-04-25" version="1" fragment="single">GAGMFARDVFPEAGFIAYCEWWYRHPGADMAFLAALEARAPHSGWGAGMFARDVFPEAGFIAYCEWWYRHPGADMAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L6</accession>
    <name>A0A2M9P4L6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004434">
        <property type="protein sequence ID" value="PJN92465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8573" checksum="0A6EB2306120BBFB" modified="2018-04-25" version="1" fragment="single">ADAITRLPDRATRPTTQRIAGENWSGIARTWEIIPQRAAVYDLGAADAITRLPDRATRPTTQRIAGENWSGIARTWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q7</accession>
    <name>A0A2M9P4Q7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004310">
        <property type="protein sequence ID" value="PJN92505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7661" checksum="47FD63FEDA89FDAC" modified="2018-04-25" version="1" fragment="single">MQGFDAIHPEPLQKRILPSGAKLRKIKALGDDHGRRSTRRTRLKVSTASFGRRSRLGARFPPRTRPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U6</accession>
    <name>A0A2M9P4U6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004180">
        <property type="protein sequence ID" value="PJN92545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="7391" checksum="97304F7EA76DEADF" modified="2018-04-25" version="1" fragment="single">EFRDFLNQEYQAYLLAMQDYLNCLGREHESATKEINEIMARWMLWFGDDAKIHSNSPEPARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V7</accession>
    <name>A0A2M9P4V7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004101">
        <property type="protein sequence ID" value="PJN92572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="8705" checksum="7456F963965014D2" modified="2018-04-25" version="1" fragment="single">SLGQDVSGTIEIIGVTTESEELKAVTATVHDLPTRAKKRGAGIGTGGGGGELGNDGDSTAPQQGELSFSVDEFSRAIMAKIVKKCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P567</accession>
    <name>A0A2M9P567_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003842">
        <property type="protein sequence ID" value="PJN92658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="8941" checksum="1B7AC9C362B07584" modified="2018-04-25" version="1" fragment="single">MAFGLYGYVSGGMPARFGANPIRTAYLDSAKASPKRDLCHSYPGHMVAPADACQFFVEGGDVAVFGDSHAITLSMGMARVLEPEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P571</accession>
    <name>A0A2M9P571_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TraG/TraD family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_21905</name>
        <name evidence="3" type="ORF">CNY89_26105</name>
        <name evidence="2" type="ORF">CNY89_27405</name>
    </gene>
    <organism evidence="2 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003721">
        <property type="protein sequence ID" value="PJN92701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003328">
        <property type="protein sequence ID" value="PJN92834.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002151">
        <property type="protein sequence ID" value="PJN93297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92834.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7038" checksum="10E3C288902913C4" modified="2018-04-25" version="1" fragment="single">MVPTLLTLTDGSVVVADPSSELAAMTARHRATLGTVIFLNPFGSVFTQETGMAFPDTGFNPLSILDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B1</accession>
    <name>A0A2M9P5B1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003635">
        <property type="protein sequence ID" value="PJN92736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8989" checksum="317FEF11643CE0C7" modified="2018-04-25" version="1" fragment="single">DGVVIRDNTVAYDSNQIVNQIPLIDVSPSSRNVDIGENTVYGVDAATRTRPSSWSPTRPSCRPRSETSGAGIRSCSRREPTPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F0</accession>
    <name>A0A2M9P5F0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003595">
        <property type="protein sequence ID" value="PJN92750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7378" checksum="1E2AA00B1836F487" modified="2018-04-25" version="1">MLHVTYDKSDRLLTEEEIGDESGISLAEVASNIALRKRYAKLRGMTDEEAKAVTKQKWSQPTVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F1</accession>
    <name>A0A2M9P5F1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01360</name>
        <name evidence="1" type="ORF">CNY89_26605</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003480">
        <property type="protein sequence ID" value="PJN92784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000046">
        <property type="protein sequence ID" value="PJN96644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="24" mass="2843" checksum="E61A7250759BA779" modified="2018-04-25" version="1" fragment="single">CDRTTAWRRWQLALTKIAARLNAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M4</accession>
    <name>A0A2M9P5M4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003346">
        <property type="protein sequence ID" value="PJN92829.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="84"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92829.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="12036" checksum="ECBB8E6B8B2E0278" modified="2018-04-25" version="1" fragment="single">HPEWIFVRHEDLTADPVASFRDVYGRLGLAFAPDTPERIANLSEQSGGLAAFSLFGSRRRVNRNSKDVAKLFRKRLSEEDIRRISDRAATSGRISTPKPSGSAAPRQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N2</accession>
    <name>A0A2M9P5N2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25825</name>
        <name evidence="2" type="ORF">CNY89_29155</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004315">
        <property type="protein sequence ID" value="PJN92504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003236">
        <property type="protein sequence ID" value="PJN92861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7339" checksum="3008B28D02CEC9F8" modified="2018-04-25" version="1" fragment="single">PRASCAKRGGAFMIGAAIFIYLGLVILGALPSPIPPAASAAMGDLFSDYVDFWRATISARVPPMSGPISASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N4</accession>
    <name>A0A2M9P5N4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003344">
        <property type="protein sequence ID" value="PJN92830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="12803" checksum="6B10E608CD1FD56A" modified="2018-04-25" version="1" fragment="single">LAVLYLPKPPTTFQPMHDFRRLPDVGPRRFSPDLTLEIRLAQQRRMLAIELFEDAEERPRPFMLQTTIDTDPESVSQSVREALRVDYALQSHWRDPRVAFLAWRSRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5X7</accession>
    <name>A0A2M9P5X7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003071">
        <property type="protein sequence ID" value="PJN92933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10422" checksum="68E2F2D7F76E3778" modified="2018-04-25" version="1" fragment="single">MGRGSTAAPQSGDAGTRLAQSRLSVLELAKGLGNVAEACRQRGLDRTSFYEWKRRFQTQGFEGLKDLPPIHKSHPQTTPPEVVERIEALALEHPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E9</accession>
    <name>A0A2M9P6E9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GreA_GreB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23835</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002644">
        <property type="protein sequence ID" value="PJN93088.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GreA_GreB" evidence="2">
        <location>
            <begin position="23"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="95"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="119"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93088.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14784" checksum="CBCBCD8EEB22DCF7" modified="2018-04-25" version="1" fragment="single">GAACGDRTIARDASRRGQYRLGVSYRDEITGRVHSVRLAMPQDADIRIRRVSVLTPVGTALIGRAEGAVIDCEFPAGTLRRLAILRISKNGPKPESAGIFRRESVRRMGDATSEANRPPHVASERRDLERMSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H3</accession>
    <name>A0A2M9P6H3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydropyrimidine dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002575">
        <property type="protein sequence ID" value="PJN93115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028261">
        <property type="entry name" value="DPD_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006006">
        <property type="entry name" value="GltD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42783:SF1">
        <property type="entry name" value="PTHR42783:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14691">
        <property type="entry name" value="Fer4_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fer4_20" evidence="1">
        <location>
            <begin position="25"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="10061" checksum="ADB2BF28B77568DF" modified="2018-04-25" version="1" fragment="single">MAVNRMLRFVTVPRDMPSKRGADERREDFDEIYREFAAAKAEEQASRCSQCGVPYCQSHCPLHNNIPDWLKLTAEGRLREAYEISQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H8</accession>
    <name>A0A2M9P6H8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002431">
        <property type="protein sequence ID" value="PJN93171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="59"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15470" checksum="628FADFBFE3B1E0B" modified="2018-04-25" version="1" fragment="single">GVTADADKLRIVEARFCGPRLVSATARAHGISRSLLRTWRRLAREGKLGVPLAPSFAPGMLAPAGGSENQPGIQRGADRDRAGERAADHRRSRDRCGSARAGDRGAGAGMIVFPPAGGGGLLTCPHLVARIKSDAWWAWWPWLVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J6</accession>
    <name>A0A2M9P6J6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002505">
        <property type="protein sequence ID" value="PJN93138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7289" checksum="DAD230FBFBACB690" modified="2018-04-25" version="1" fragment="single">MVVADPSSELAAMTARHRATLGTVIFLNPFGSVFTQETGMAFPDTGFNPLSILDPASSTFHADVSAFAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R4</accession>
    <name>A0A2M9P6R4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mobilization protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22785</name>
        <name evidence="2" type="ORF">CNY89_23080</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002441">
        <property type="protein sequence ID" value="PJN93165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002374">
        <property type="protein sequence ID" value="PJN93195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="9119" checksum="ACED13F8793C0A71" modified="2018-04-25" version="1" fragment="single">MAYKRKSPDEKIAELEKKAAQIKARLQSEQAKIKGQERKNDTRRKIIVGALALEHEDAAFKETLARLIRQYVTKPQDRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T6</accession>
    <name>A0A2M9P6T6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_22570</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01002320">
        <property type="protein sequence ID" value="PJN93228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10256" checksum="C33D0060A965D4E8" modified="2018-04-25" version="1">MDFIFTVCDNAAGEVCPLWPGHPTSAHWGIEDPAAVEGPEFRKRAAFDDALTYMRNRISAFINLPIASIDRLALKAKLQAIGAMDGATSPKPEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W3</accession>
    <name>A0A2M9P6W3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcription antitermination factor NusB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002116">
        <property type="protein sequence ID" value="PJN93314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.940.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035926">
        <property type="entry name" value="NusB-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006027">
        <property type="entry name" value="NusB_RsmB_TIM44"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01029">
        <property type="entry name" value="NusB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48013">
        <property type="entry name" value="SSF48013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="NusB" evidence="2">
        <location>
            <begin position="2"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="6151" checksum="65A25D3C337F9A55" modified="2018-04-25" version="1" fragment="single">FRAAGAEFVAADTPPKVTITEYLEIAKAFYPAGKEAKFVNGVLDHMAHEARPQDFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y8</accession>
    <name>A0A2M9P6Y8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hybrid sensor histidine kinase/response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002083">
        <property type="protein sequence ID" value="PJN93334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013656">
        <property type="entry name" value="PAS_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08448">
        <property type="entry name" value="PAS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00229">
        <property type="entry name" value="sensory_box"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PAS" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17651" checksum="058E8E027EC3D6BC" modified="2018-04-25" version="1" fragment="single">MDQDKIYRFANQRFAAAYGFSPEEILGKHADEFIWRDAMVLGDPFFEAAHLGQAVDFTHPARHADGRPLMVRTFLRPDIAPDGVVRGFYVCSINVTQQKEAEAALLQSQKMDAVGQLASGIAHDFNNLLAIILGNLLPLRDGAGEAAGAPADLLEDYIAPAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P715</accession>
    <name>A0A2M9P715_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Formate dehydrogenase accessory protein FdhE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002039">
        <property type="protein sequence ID" value="PJN93356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16341">
        <property type="entry name" value="FdhE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1670.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024064">
        <property type="entry name" value="FdhE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006452">
        <property type="entry name" value="Formate_DH_accessory"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37689">
        <property type="entry name" value="PTHR37689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04216">
        <property type="entry name" value="FdhE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144020">
        <property type="entry name" value="SSF144020"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14027" checksum="52A82868117B79F3" modified="2018-04-25" version="1" fragment="single">DPDRLVPIRVGLCPCCGGRPASSVVLGTLRIEGARYAACATCTTLWNEVRVKCLACGSTKGIGYRGLAEEAVIKAEVCDECRSWVKILYQNKDTALDPVADDVGSLGLDARMRETQWRRAGFDPFLVGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P759</accession>
    <name>A0A2M9P759_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Indolepyruvate ferredoxin oxidoreductase</fullName>
            <ecNumber evidence="3">1.2.7.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21110</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.7.8" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001974">
        <property type="protein sequence ID" value="PJN93394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043805">
        <property type="term" value="F:indolepyruvate ferredoxin oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.920.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019752">
        <property type="entry name" value="Pyrv/ketoisovalerate_OxRed_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002869">
        <property type="entry name" value="Pyrv_flavodox_OxRed_cen"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01558">
        <property type="entry name" value="POR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53323">
        <property type="entry name" value="SSF53323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="POR" evidence="2">
        <location>
            <begin position="73"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="17488" checksum="CDA9353E900604BE" modified="2018-04-25" version="1" fragment="single">PLETPLGRKRAIDQSSCNKDFSCLKGFCPSFVTLEGAKPRKPARVALEIPDLPAPVLPELTATTWNIVVTGVGGTGVVTVGALLAMAAHLEGLGAGVMEMAGLAQKGGAVHIHCRIARSPAEITAIRVAVGEADALIGGDLEGLGAGVMEMAGLAQKGGAVHIHCRIARSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U9</accession>
    <name>A0A2M9P7U9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyr_redox_dim domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001694">
        <property type="protein sequence ID" value="PJN93580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_dim" evidence="1">
        <location>
            <begin position="5"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9641" checksum="DE616C8705BD0F0F" modified="2018-04-25" version="1" fragment="single">RPMLHVLAGREERMLMKLVVAADSRRVLGCHIVGHGAGEMIQLAAIPMRMGATKEDFDAALAVHPTAAEELVTMRRPVAERLAIAGSGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P820</accession>
    <name>A0A2M9P820_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19070</name>
        <name evidence="4" type="ORF">CNY89_25340</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003093">
        <property type="protein sequence ID" value="PJN92923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001555">
        <property type="protein sequence ID" value="PJN93691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11385" checksum="2D69B83C30708CE9" modified="2018-04-25" version="1" fragment="single">WDEFAAPGAPSMDFIFTVCDNAAGEVCPLWPGHPTSAHWGIEDPAAVEGPEFRKRAAFDDALTYMRNRISAFINLPIASIDRLALKAKLQAIGAMDGATSPKPEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P873</accession>
    <name>A0A2M9P873_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Penicillin-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18665</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001493">
        <property type="protein sequence ID" value="PJN93746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031376">
        <property type="entry name" value="PCB_OB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17092">
        <property type="entry name" value="PCB_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PCB_OB" evidence="2">
        <location>
            <begin position="118"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17092"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="23926" checksum="AC047EA2C006F103" modified="2018-04-25" version="1" fragment="single">PSNLHPVRQKDKAIGRRNYVIGQMADNGYVTREEARAAEAEDLVSVQSGAIASARSEMPPRDYFTDEIRRQLSASLGDEELFTGGLTIKATVDPDLQATAARALRDGLEKFDRDRRVYRGPAGRIDPAKFDPAEYTVDEALWRRALAETPVPRDIEGWRPAVVLSIGETSARIGVEGVEETADGHFLAFSDAKWARLRDGARLREARGPTTCGTWAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A4</accession>
    <name>A0A2M9P8A4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001466">
        <property type="protein sequence ID" value="PJN93774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008878">
        <property type="entry name" value="Transposase_IS66_Orf2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36455">
        <property type="entry name" value="PTHR36455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05717">
        <property type="entry name" value="TnpB_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12816" checksum="9D4C7947BC1C6BC5" modified="2018-04-25" version="1">MIPVSGGVRVYIATRPVDFRKGHDGLAAAVQETLGLDPFCGAIFVFRSKRADRLKLLVWDGTGLVLAHKRLENGKFAWPKVADGTMKLTPAQFSALFEGLDWRAVRSARHPRPTSAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A7</accession>
    <name>A0A2M9P8A7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001466">
        <property type="protein sequence ID" value="PJN93775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024463">
        <property type="entry name" value="Transposase_TnpC_homeodom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13007">
        <property type="entry name" value="LZ_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LZ_Tnp_IS66" evidence="2">
        <location>
            <begin position="17"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="4"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5984" checksum="6F501E8608EB64D9" modified="2018-04-25" version="1" fragment="single">MAARDAALAELTEANRRLEQMIDDLRREKFGARSEKLSPDQWNLPLEDVEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B6</accession>
    <name>A0A2M9P8B6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001478">
        <property type="protein sequence ID" value="PJN93763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008533">
        <property type="entry name" value="DUF815"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05673">
        <property type="entry name" value="DUF815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF815" evidence="1">
        <location>
            <begin position="6"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="22446" checksum="97337A0B70B4B0B1" modified="2018-04-25" version="1" fragment="single">MRPTTCLLWGARGMGKSSLVKAAHAEAARTAPGLKLIELHREDLPTIGRLLALLRGAPYRFLLFCDDLSFEKDDAHYKSLKAVLDGGIEGRPENVALYATSNRRHLMPRDMIENERQTALNPSEAVEEKVSLSDRFGLWLGFHACSQDHFLGMIRGYCDAYGIEIGDEELRAEAIEWSQTRGGRSGRVAWQFVTDLAGRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E6</accession>
    <name>A0A2M9P8E6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NADPH:quinone reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001449">
        <property type="protein sequence ID" value="PJN93793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019475">
        <property type="term" value="P:L-lysine catabolic process to acetate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008567">
        <property type="entry name" value="KCE_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37418">
        <property type="entry name" value="PTHR37418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05853">
        <property type="entry name" value="BKACE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="27028" checksum="EB7E91F06D29CE40" modified="2018-04-25" version="1" fragment="single">QIADSALEAAKAGAAVVHLHVRDPLTGRPSMELDLYADVLARIRARNTEVIVNLTTGPGGRFVPSEEDPKVAGPGTTLTTPDRRVEHVARLRPDVCTLDLNTMNSGGEVIINTPGNVRRMARAIDEAGVRPEIELFDSGDVALMRDLIADGTLRGPVLTSFVMGVRYGFQPSPETVLYARGLLPADAQFTAIGVGRASFPMVAQSYLAGGHVRVGLEDSVYLDRGVLAPSNAALVEKARRIVADLGGQIATPRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T9</accession>
    <name>A0A2M9P8T9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Copper chaperone</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001317">
        <property type="protein sequence ID" value="PJN93947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HMA" evidence="2">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6873" checksum="5D864CA2C1D0C6F2" modified="2018-04-25" version="1">MQFQIDNMTCGGCARSVTKAIHSVDPQAKVDIDLPQKRVTVESGVDRSAVASVLEDAGFSPRPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P921</accession>
    <name>A0A2M9P921_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Ribosomal protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_17015</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 8">Belongs to the universal ribosomal protein uL1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001268">
        <property type="protein sequence ID" value="PJN94012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00403">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01318_B">
        <property type="entry name" value="Ribosomal_L1_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005878">
        <property type="entry name" value="Ribosom_L1_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002143">
        <property type="entry name" value="Ribosomal_L1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023674">
        <property type="entry name" value="Ribosomal_L1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028364">
        <property type="entry name" value="Ribosomal_L1/biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016095">
        <property type="entry name" value="Ribosomal_L1_3-a/b-sand"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023673">
        <property type="entry name" value="Ribosomal_L1_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00687">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002155">
        <property type="entry name" value="Ribosomal_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56808">
        <property type="entry name" value="SSF56808"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01169">
        <property type="entry name" value="rplA_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01199">
        <property type="entry name" value="RIBOSOMAL_L1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 8" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="6 8 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="4" id="KW-0810">Translation regulation</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000659"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="22580" checksum="F5AECEF6913F0085" modified="2018-04-25" version="1" fragment="single">AFDGKENLSVDEAVALVKANAKAKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGKTVRVAVFARGAKAEEAQAAGADIVGAEDLMEIIQGGKIDFDRAIATPDMMPIVGRLGKILGPRNLMPNPKVGTVTMDVAQAVKNAKGGEVQFKVEKAGIIHGGVGKASFDAEKLAENVKAFVQAVSRAKPAGAKGTYVQKISLSSTMGPGVSVDVSSAVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P943</accession>
    <name>A0A2M9P943_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">tRNA glutamyl-Q(34) synthetase GluQRS</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001238">
        <property type="protein sequence ID" value="PJN94051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004812">
        <property type="term" value="F:aminoacyl-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043039">
        <property type="term" value="P:tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="2">
        <location>
            <begin position="14"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13178" checksum="A3D9275ED58C8E55" modified="2018-04-25" version="1" fragment="single">LDPGRHALKPVEMMREIGDVVLARRDIGVAYHLAVVVDDAAQAITHVVRGADLAEATPLHRLLQALLDLPAPLWLHHRLIRDETGKRLAKRDDARSLAALRAEGRTPAEIRALLAPAATEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P951</accession>
    <name>A0A2M9P951_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001230">
        <property type="protein sequence ID" value="PJN94061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="332" mass="36092" checksum="D789FCB5D5A9D280" modified="2018-04-25" version="1" fragment="single">QDGLYLGALNDVLIENNYIGDFNSATPTSPTNKDGIQFYTNSTTAASDGVTIRGNTFESESLRQNITILNEAYKAGDLTTYHRDILIEDNYIRSANTQGVTVAHSDGVIIRNNTVAYDSNQIVTQIPLINVSTTSLNVNVSDNTIYGVDDAPENATTITVGTQAELLAALTSVRGGDTILLEAGTYEDLNLTHSSARNYKFTETVTIKSEDVNNRAVVNELFIFGVQNLVISDIDFDYTGAQASSTLAWQVGMPFYVESATDLMLDRLDFDGHRINGFGAATGLRVKNSSDVTISNTEMTDFKIAMNISGGSDFTIRDNDIKQMSQDGLYMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F5</accession>
    <name>A0A2M9P9F5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001148">
        <property type="protein sequence ID" value="PJN94177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9496" checksum="12388BC825C8F941" modified="2018-04-25" version="1">MPSHPNEQFADELAVLVNHELAQMRRQVQQHRPGGADDDPFTQALDRRVHVPPHIGSLDEALRVIAEIRDKLRPHAVVAALGAAPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I0</accession>
    <name>A0A2M9P9I0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Probable branched-chain-amino-acid aminotransferase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_16110</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Acts on leucine, isoleucine and valine.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001155">
        <property type="protein sequence ID" value="PJN94169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001544">
        <property type="entry name" value="Aminotrans_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018300">
        <property type="entry name" value="Aminotrans_IV_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036038">
        <property type="entry name" value="Aminotransferase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043132">
        <property type="entry name" value="BCAT-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043131">
        <property type="entry name" value="BCAT-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01063">
        <property type="entry name" value="Aminotran_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56752">
        <property type="entry name" value="SSF56752"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00770">
        <property type="entry name" value="AA_TRANSFER_CLASS_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="5 7" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="276" mass="29659" checksum="D0938FF7AA73F1FF" modified="2018-04-25" version="1" fragment="single">MTDPSSAAPSRTVYVNGAWLPEGEAKISVFDRGFLFADGVYEVTSVLDGKLIDLPQHMARLRRSLGELSMPAPASERELEAIHRELIARNRLTEGMVYLQVTRGAADRDFVYPADPKPSLVLFTQARSLADTPAGRDGIRVVTLPDLRWKRRDIKTVQLLAPSMTKMAARAAGVDDAWMVEDGLITEGTSSNAYLVTGDGVVITRPLSHAILSGITRAALFAYAAEAGTLIHERPFTPEEARGAAEAFVTAASAFVTPVVEIDGVTLGDGRPGPVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J7</accession>
    <name>A0A2M9P9J7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001119">
        <property type="protein sequence ID" value="PJN94218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9102" checksum="E61959A4718E6CB6" modified="2018-04-25" version="1" fragment="single">MTKRLLLAASGLLLEAVLGGEARAEPAPREVPTAGSVISTRVGEEIEFVEAASWRGLETLQDVKAGDVLRTNALGQVAILFADRTQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF8</accession>
    <name>A0A2M9PAF8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000926">
        <property type="protein sequence ID" value="PJN94526.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94526.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10939" checksum="A1A7EEC432DF8F27" modified="2018-04-25" version="1" fragment="single">MRERIRHVYGRDSTVAHPPVELDRLPFREQRGDYYVAACFAAPYKRTDLVVRAFAAMPERRLVVVGEQATRDLRALAGPNVTFAGYLPRDRYVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH1</accession>
    <name>A0A2M9PAH1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Arsenate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the ArsC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000916">
        <property type="protein sequence ID" value="PJN94545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006660">
        <property type="entry name" value="Arsenate_reductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30041">
        <property type="entry name" value="PTHR30041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03960">
        <property type="entry name" value="ArsC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51353">
        <property type="entry name" value="ARSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01282"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7602" checksum="C2F270C9844159DF" modified="2018-04-25" version="1" fragment="single">AELGLGDPALSDDRLLDAVAAHPVLLNRPIVVSPKGVRLCRPSEAVLDLLPPQRGAFAKEDGEPVVDAAGAPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN2</accession>
    <name>A0A2M9PAN2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Acyl carrier protein AcpXL</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_13550</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Carrier of the growing fatty acid chain in fatty acid biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="8">Glycolipid biosynthesis; KDO(2)-lipid A biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000882">
        <property type="protein sequence ID" value="PJN94600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00360"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031177">
        <property type="term" value="F:phosphopantetheine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0036104">
        <property type="term" value="P:Kdo2-lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1200.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036736">
        <property type="entry name" value="ACP-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003231">
        <property type="entry name" value="Acyl_carrier"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020806">
        <property type="entry name" value="PKS_PP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009081">
        <property type="entry name" value="PP-bd_ACP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006162">
        <property type="entry name" value="Ppantetheine_attach_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20863">
        <property type="entry name" value="PTHR20863"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00550">
        <property type="entry name" value="PP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00823">
        <property type="entry name" value="PKS_PP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47336">
        <property type="entry name" value="SSF47336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50075">
        <property type="entry name" value="CARRIER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00012">
        <property type="entry name" value="PHOSPHOPANTETHEINE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="3" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="2 10" id="KW-0596">Phosphopantetheine</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Carrier" evidence="11">
        <location>
            <begin position="7"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="modified residue" description="O-(pantetheine 4'-phosphoryl)serine" evidence="10">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003180"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022450"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00258"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN94600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10537" checksum="E8E779A8D38D93EC" modified="2018-04-25" version="1">MSDSVKDSIEDRVVAILAEQALLDPSEIRRDASPADLGVDSLGLVEVVFALEEAFDIQIPFNANDPAQKDAARPDFDISTVDSLVQAVKALVAAREQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB24</accession>
    <name>A0A2M9PB24_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000805">
        <property type="protein sequence ID" value="PJN94729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="14"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9136" checksum="489D10F56CFC9B1B" modified="2018-04-25" version="1">MAILPAFIMSSQKATSLRTATAPDGEAEPGNRLEPRRIDAGEHAGKYAIPTRCLADPAFAELVDRFEGLTAVDLDIAEAWPPVED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB29</accession>
    <name>A0A2M9PB29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AsnC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000808">
        <property type="protein sequence ID" value="PJN94725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AsnC_trans_reg" evidence="1">
        <location>
            <begin position="6"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="9065" checksum="12BDE5C6918C9BC6" modified="2018-04-25" version="1">MICIFIQLRCRPGRTYEVADAIYDMEFASELYSTSGEWDLLMKVYVPEGEDVGRFVADRLRDLPDVDRSLTTMTFKAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB39</accession>
    <name>A0A2M9PB39_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Urea carboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000793">
        <property type="protein sequence ID" value="PJN94748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018959">
        <property type="entry name" value="DUF1989"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09347">
        <property type="entry name" value="DUF1989"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1989" evidence="1">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11213" checksum="B49258CD45054C8D" modified="2018-04-25" version="1" fragment="single">NTVRFGVETQYLHACRENFIVELARHDMGKRDIVPNINFFMNVPISPDGTMTIDDGVSHPGDHVEMVAEMDVLCVISNCPQINNPCNGFDPTPIRVTIRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB99</accession>
    <name>A0A2M9PB99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipid kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000758">
        <property type="protein sequence ID" value="PJN94814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014773802" evidence="1">
        <location>
            <begin position="28"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="209"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="209" mass="22085" checksum="C00218AA83623D4E" modified="2018-04-25" version="1" fragment="single">MKGNRMNLLKTTTLAAGLLALASAAQAEVRTDFKVGWSIYVGWMPWGYAAEAGIVQKWADKYGISIEVTQFNDYVESINQYTAGAYDAVTLTNMDGLSIPAAGGVDTTAVIVGDFSAGNDAVILKDGATLAEIAGRDVNLVEFSVSHYLLARALETAGMSERDVKVVNTADPDMVGAFQTADVTAMVTWNPMVSEIVTLPGATSVFDSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA7</accession>
    <name>A0A2M9PBA7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cyclic nucleotide-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000751">
        <property type="protein sequence ID" value="PJN94824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="22"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="237" mass="25483" checksum="1B879BEAA7914E62" modified="2018-04-25" version="1">MGGSKNIGLTAPDRQRLGGRGWLSRQPEAFRDAILDECVAMDLEPGESAMRLGDRAGNLFGLVDGWLDVLISPETLDPTLVHVATTGWWFGDSALLTGTPKRGAHVARTPCRIAHLPAEAVSRLDREGLDLWRRVAHISVGVIDHAFAVIAASRHHQPLERAVLTLRFLLGDGLPFATGAPLDPPVLPISQTEFAEIANLSRNAAGDALRQLARSGAIRLGYREIELLDAAMLGGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB2</accession>
    <name>A0A2M9PBB2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000758">
        <property type="protein sequence ID" value="PJN94812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8602" checksum="8B1D6734316A0124" modified="2018-04-25" version="1">MGPWRDADAFAHAKFIAFAATARPLLAKAGVEPDAGCFEIPGDSPRRSSSSAAARCATGRARSRSIWSPDSRANAGPGGPRFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB5</accession>
    <name>A0A2M9PBB5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Xylose isomerase</fullName>
            <ecNumber evidence="5">5.3.1.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_12105</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>alpha-D-xylose = alpha-D-xylulofuranose</text>
            <dbReference type="Rhea" id="RHEA:22816"/>
            <dbReference type="ChEBI" id="CHEBI:28518"/>
            <dbReference type="ChEBI" id="CHEBI:188998"/>
            <dbReference type="EC" id="5.3.1.5"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotetramer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the xylose isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.5" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000741">
        <property type="protein sequence ID" value="PJN94836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009045">
        <property type="term" value="F:xylose isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00455">
        <property type="entry name" value="Xylose_isom_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001998">
        <property type="entry name" value="Xylose_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00688">
        <property type="entry name" value="XYLOSISMRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51415">
        <property type="entry name" value="XYLOSE_ISOMERASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="3 5 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0859">Xylose metabolism</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="7">
        <location>
            <begin position="116"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU000609"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="35405" checksum="802980A0915E4EE9" modified="2018-04-25" version="1" fragment="single">MTDFFRGIEPLRYEGPETTNPFAFRHYDPEEVVLGKRMEDHLRFAVAWWHSFAWEGGDPFGGQTFQRPWHPQDSMAQAKVKADVAFDMFRLLGAPFYCWHDADIRPETGSLKGNLAGLDEITDYMQGRMEETGVRLLWGTANLFSHRRFMSGASTNPDPEVFAFAAATVKGCLDATHRMGGENYVLWGGREGYETLLNTDLGQELDHMGRFLNMVVEYKHKIGFKGQILVEPKPQEPSKHQYDYDAATCFGFLQKYGLENEVKLNLEQGHAILAGHSFEHEIATAAALGVFGSIDMNRNDYQSGWDTDQFPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK7</accession>
    <name>A0A2M9PBK7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycoside hydrolase 105 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000694">
        <property type="protein sequence ID" value="PJN94923.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010905">
        <property type="entry name" value="Glyco_hydro_88"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07470">
        <property type="entry name" value="Glyco_hydro_88"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94923.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="28022" checksum="933B8E82C61E7B59" modified="2018-04-25" version="1" fragment="single">MTPSSREIRDKLDRLVAGMTGLRHDGRFDEPNLDGTAGDYISFDSWEWPQGVGLYGLVKLWLFTGRADLRAVVEDWYAARLAEGLPTLNVNTTAPMLGLAVLWAETRDPRWREALDGWADQVMSRMARTEEGAFEHHVSDKVNDGELWDDTLYMVGLFLAAYGQASGRRELVDEASRQFLVHARFLADKKSGLWFHGWTFQGRHNFAEARWARGNAWITAGVLDLLDLAELSPPVADFLRGVLKAQAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL6</accession>
    <name>A0A2M9PBL6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cobyrinic acid a,c-diamide synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000689">
        <property type="protein sequence ID" value="PJN94931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16272" checksum="CD7A23A407D5F529" modified="2018-04-25" version="1" fragment="single">MGRIITFAQQKGGAGKTTVLSHLAGAWAEAGRSVALIDLDPQQSLTRWARLRADPKMTLVESRDYRVAMDMRAAAKTHDYVLVDCPGAASTLLEAAVRESDLVIAPCQPSVMDVWATGSVIETARKLKRPLRIALNRVPPRHGSVEEVVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS0</accession>
    <name>A0A2M9PBS0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sigma70_r2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000661">
        <property type="protein sequence ID" value="PJN94988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="1">
        <location>
            <begin position="12"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15931" checksum="C2BED789549FEBB6" modified="2018-04-25" version="1">MENRFQRDLVELVPRLRRFAYALCGTTDMADDLVQAACERALRNASGFQPGTRMDSWMFRIIQNLWLDDRRRRKVRGHQIDPDMTALWTVAVRVGWTPQPPEKSGSFPRSSQIVTARRFLGRATSGSSWDELRVAFTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS1</accession>
    <name>A0A2M9PBS1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_11135</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000660">
        <property type="protein sequence ID" value="PJN94990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5061" checksum="6C857F621B3CE7F7" modified="2018-04-25" version="1" fragment="single">GSYFPGFLEPRRMAEKALTAVIQEAYIQGVSTPAWSEISTSLSIVAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT0</accession>
    <name>A0A2M9PBT0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase subunit gamma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000657">
        <property type="protein sequence ID" value="PJN94996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="4605" checksum="6A9C613A1540B763" modified="2018-04-25" version="1" fragment="single">MNALNARLAAVTIAELPPTFRIALRVAEPGPAGIVIGLVLPARIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY9</accession>
    <name>A0A2M9PBY9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_10810</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000632">
        <property type="protein sequence ID" value="PJN95048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="4">
        <location>
            <begin position="124"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="124"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="223" mass="24840" checksum="27E742700B0CD29F" modified="2018-04-25" version="1">MRLLLVEDTDDVAEAIAASFVRRGDAVDRVGSVEAAQDTLAVNDYEVIILDINLPDGEGTEVLRSLRRQRRPTPVLMLTARMRIEDRVAALDIGADDYLVKPFDLRELQARVRALGRRSGQDRSGEIVFGRLTLDPAGKVAACDGAPLSLTRREFSLLEALMANRARIMAKERLFDRIFSMDEEEIGLNAIETYVARLRRKLEGTGVAIRTLRGLGYQLVQAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC10</accession>
    <name>A0A2M9PC10_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000614">
        <property type="protein sequence ID" value="PJN95085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000944">
        <property type="entry name" value="Tscrpt_reg_Rrf2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33221">
        <property type="entry name" value="PTHR33221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02082">
        <property type="entry name" value="Rrf2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00738">
        <property type="entry name" value="rrf2_super"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51197">
        <property type="entry name" value="HTH_RRF2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10795" checksum="A987E9B6C1BDA026" modified="2018-04-25" version="1">MRLDKHTDYALRVLMFLAANTDRLSTIAEIAGRFEISEAHLMKVVYRLGKAGFVETVRGRSGGMRLAGDGSTIRVGDVVRRWRAISRLSSAFGLPATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC33</accession>
    <name>A0A2M9PC33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Multidrug transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000596">
        <property type="protein sequence ID" value="PJN95117.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="101"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="128"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="225"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95117.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="247" mass="26235" checksum="82276E3F1FE22653" modified="2018-04-25" version="1" fragment="single">MGAWIASLEGTPEGAHLAMVLALSAALAHAVFGALQKGSHDPWLSRGSIDTFMALFALPVAVFLVPRPDGRAWAILAGAVLIHFVYKLLMALAYDRAAYTVVYPVVRGSGPLATVAFAAVVFQERYTGAQWLGVLCLSGGILGLAVYNLRNLPTERTQLRAGLAIAFAAGLSVAVYTTYDAYGIRATPDPFTFLAWFFVVTSLDFPLIAAWRYARMPAPPALGPLILRGMVGALVAFVSFGAVMLAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC73</accession>
    <name>A0A2M9PC73_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000604">
        <property type="protein sequence ID" value="PJN95104.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95104.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="266" mass="27344" checksum="4A298452B7D3AF5A" modified="2018-04-25" version="1">MIKLGVSPFARRRRRAGPPLHAATAAYIAAMTMPPDATRRGHIDTLIAGLDADGDWPGIDWMVCLAAHDVVGGVSQAGRLNMKNPAKSLTAVNSPVFSALGVTGDGATSYLTAGETANAVGNSYSQNSACIGVWCNQQSGAAGIVAHAGNLNAAPRMRISPGTATSSHRINDATSLSYNGGSRLGGRILTRTGSTTKILYKDGVEVATDTAVSDFVQAADVCALRAGTSYCDDRLAFFFYGGGLSAAAVARIHARVQTFLAAIGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB4</accession>
    <name>A0A2M9PCB4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000576">
        <property type="protein sequence ID" value="PJN95163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="265" mass="27320" checksum="24364051E4813BF3" modified="2018-04-25" version="1">MIKLGVSPFARRRRAGPPLHAATADYISALTTPPDATRLGHTNALLAGIDADGDWPGIDWMVCFAAHDVVDGASQASHVNMKNPAKLLTAVNSPVFSALGVTGDGATNYLTTGEAANASGNSYARDSASLGVWCNQQSGAAGIVAHAGNLNSSARMRISPGTSTASHRVNDATSLSYNEGDRTGGRILTRTGPTTKILYKNGVEVASAATASEIVQGEHVTILRAGTSYCSDRLSFFFYGGGLSAAAVARIHARVQTFLTAIGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB6</accession>
    <name>A0A2M9PCB6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Lysozyme</fullName>
            <ecNumber evidence="2 7">3.2.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_09925</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>Hydrolysis of (1-&gt;4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.</text>
            <dbReference type="EC" id="3.2.1.17"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the glycosyl hydrolase 24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.17" evidence="2 7"/>
    <dbReference type="EMBL" id="PHNO01000562">
        <property type="protein sequence ID" value="PJN95197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030430">
        <property type="term" value="C:host cell cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003796">
        <property type="term" value="F:lysozyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016998">
        <property type="term" value="P:cell wall macromolecule catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019835">
        <property type="term" value="P:cytolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042742">
        <property type="term" value="P:defense response to bacterium"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00737">
        <property type="entry name" value="lyz_endolysin_autolysin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.530.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_04110">
        <property type="entry name" value="ENDOLYSIN_T4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033907">
        <property type="entry name" value="Endolysin_autolysin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034690">
        <property type="entry name" value="Endolysin_T4_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002196">
        <property type="entry name" value="Glyco_hydro_24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023347">
        <property type="entry name" value="Lysozyme_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00959">
        <property type="entry name" value="Phage_lysozyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7" id="KW-0929">Antimicrobial</keyword>
    <keyword evidence="4 7" id="KW-0081">Bacteriolytic enzyme</keyword>
    <keyword evidence="7" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="6" id="KW-1035">Host cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023200"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15631" checksum="081032D488C65CAB" modified="2018-04-25" version="1">MDPRALALIKEFEGFVPYAYKDAVGVWTIGYGTTAAAGLGIDPGPGMMVTEAEAEGYLLRGLEKFAASITPAVTRPATPAQMGAMLSLAYNIGPGAFLKSSVLRRFNEGDVAGAADAFRMWNKAGGKNLKGLTRRREAERALFLSNGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ1</accession>
    <name>A0A2M9PCJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">TM2 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09640</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000536">
        <property type="protein sequence ID" value="PJN95243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007829">
        <property type="entry name" value="TM2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05154">
        <property type="entry name" value="TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="46"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="TM2" evidence="6">
        <location>
            <begin position="19"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF05154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10502" checksum="FA7EA9B9294B5C78" modified="2018-04-25" version="1">MDSAERLIVATRVASEAPSPAVAFALWLLLGILSAHRFHLGRPGTAVLQILSNFVLLGFVWRLVDGVQIDRMIQQRRDALRLRLTQEALARTAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK4</accession>
    <name>A0A2M9PCK4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate-semialdehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000524">
        <property type="protein sequence ID" value="PJN95263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000534">
        <property type="entry name" value="Semialdehyde_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012280">
        <property type="entry name" value="Semialdhyde_DH_dimer_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01118">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02774">
        <property type="entry name" value="Semialdhyde_dhC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00859">
        <property type="entry name" value="Semialdhyde_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Semialdhyde_dh" evidence="1">
        <location>
            <begin position="4"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="28597" checksum="C2D927EE646823E7" modified="2018-04-25" version="1" fragment="single">MGYRIAVVGATGNVGREMLNILAEREFPVSDIVALASRKSLGTECSFGDKTLKTLDLDTFDFTGWDIAFFAVGSEATKKYAPIAAKAGCVVIDNSSLYRYDHDVPLIVPEVNPDAVMGYAKRNIISNPNCSTAQMVVALKPLHDRATIKRVVVSTYQSVSGTGKDAMDELWNQTKGIFVPGQEVEPSVYPKQIAFNVIPHIDVFLEDGTTKEEWKMVAETKKILDPKIKLTCARSSPRSAAFPCRSWIRTASAACGSGSRAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR9</accession>
    <name>A0A2M9PCR9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">C-type cytochrome, methanol metabolism-related</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000504">
        <property type="protein sequence ID" value="PJN95318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022411">
        <property type="entry name" value="C-typ_cyt_methanol_metab-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03874">
        <property type="entry name" value="4cys_cytochr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014708992" evidence="1">
        <location>
            <begin position="22"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18497" checksum="55B5C98566D69C79" modified="2018-04-25" version="1">MKKAAPLLAFALIVAAGAAAAQDAPNVEAVSDDGVRFFNSDDVPTYKIFEDGSIDWPTFSGYRRYHAECHVCHGPDGEGSTYAPALKASALRMDYYDFTGVVASGRQRVGAAENQVMPAFGTNPNVMCYLDDIWTYLRARGTDAVPRGRPAKRQDKSDAYAEAEKACMEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW1</accession>
    <name>A0A2M9PCW1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L14</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08820</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000475">
        <property type="protein sequence ID" value="PJN95385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01367">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_L14_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_L14P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005745">
        <property type="entry name" value="Ribosomal_L14P_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019972">
        <property type="entry name" value="Ribosomal_L14P_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="PTHR11761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="SSF50193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01067">
        <property type="entry name" value="rplN_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00049">
        <property type="entry name" value="RIBOSOMAL_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 5" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="4" id="KW-0699">rRNA-binding</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11518" checksum="5A33A5D9B4E1AF5B" modified="2018-04-25" version="1" fragment="single">VQCIKVLGGSHRRYASVGDIIVVSVKEAIPRGRVKKGDVRKAVVVRTAKEVRREDGTAIRFDRNAAVILNNQNEPVGTRIFGPVVRELRAKNFMKIISLAPEVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW5</accession>
    <name>A0A2M9PCW5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sulphotransf domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000487">
        <property type="protein sequence ID" value="PJN95354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024628">
        <property type="entry name" value="Sulfotransferase_Stf0_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09037">
        <property type="entry name" value="Sulphotransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulphotransf" evidence="1">
        <location>
            <begin position="214"/>
            <end position="427"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="49278" checksum="EA5B960E095C65FC" modified="2018-04-25" version="1">MTAGRAARRAMALLAPVGDDLEGLGLQRFLQQMREVRPDLLHPVGAVLGQFGRLEQRDDAARAVLGHRVVELPDPGQGHDLGLDALEDLSGLGVGPGLHLVVRDTSMHVVSSPHRHSCCRHAPLRAGAAERAIIARNRRPRAFGRPSPAVGTFSGCSASPPVLSSTWFLELSMFRRVSRALRRALGLPPGPHPYPEQFEPDMDMAPFAGRPHMYLIASTPRCGSHFLGHALGKTGAFGVPMEYLNQGSFPFWTKRFGTREMPDLIAALAPLRTSPNGRFGLKAHWTQFEPYADRSLFTPYGGIERAVFLYRRDLLGQAISLLRAAQTRQYISGSEAQGSEKYMYDRIIRRAEGLRAQNLAWQAYLRDSFDKPVLTVVYEDLVADQQAEFTRIATFFDGDAAVIPTASERTQRQSDSVSGAWRRRFLAEMRDEHRWIVEPQRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD39</accession>
    <name>A0A2M9PD39_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Molybdopterin oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_08415</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000446">
        <property type="protein sequence ID" value="PJN95450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006963">
        <property type="entry name" value="Mopterin_OxRdtase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027467">
        <property type="entry name" value="MopterinOxRdtase_cofactor_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04879">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10518">
        <property type="entry name" value="TAT_signal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00926">
        <property type="entry name" value="Molybdop_Fe4S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51669">
        <property type="entry name" value="4FE4S_MOW_BIS_MGD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00551">
        <property type="entry name" value="MOLYBDOPTERIN_PROK_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2 4" id="KW-0408">Iron</keyword>
    <keyword evidence="3 4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S Mo/W bis-MGD-type" evidence="5">
        <location>
            <begin position="47"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="54"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="95"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="21066" checksum="77793C9B061ABF6B" modified="2018-04-25" version="1">MNVDLSRRSFLKLTGAGVAATSLGAMGFGEAEAAEAAHVRAFKLTATTETRNTCPYCSVACGVILYSKGDVKAGDAQILHVEGDVDHPTNRGTLCPKGAALKDFIHAPTRLKQPMLRAAGSDRFEPIAWDEALDRIARAMKDDRDANFVATNDKGVPVNRWTTVGFLAASATTNETAWATTKVVKALGIAGFDNQARV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH6</accession>
    <name>A0A2M9PDH6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">Muconolactone Delta-isomerase</fullName>
            <shortName evidence="7">MIase</shortName>
            <ecNumber evidence="5 7">5.3.3.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">catC</name>
        <name evidence="9" type="ORF">CNY89_07705</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(S)-muconolactone = (4,5-dihydro-5-oxofuran-2-yl)-acetate</text>
            <dbReference type="Rhea" id="RHEA:12348"/>
            <dbReference type="ChEBI" id="CHEBI:58425"/>
            <dbReference type="ChEBI" id="CHEBI:58736"/>
            <dbReference type="EC" id="5.3.3.4"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Aromatic compound metabolism; beta-ketoadipate pathway; 5-oxo-4,5-dihydro-2-furylacetate from catechol: step 3/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the muconolactone Delta-isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.3.4" evidence="5 7"/>
    <dbReference type="EMBL" id="PHNO01000395">
        <property type="protein sequence ID" value="PJN95568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00157">
        <property type="reaction ID" value="UER00260"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016159">
        <property type="term" value="F:muconolactone delta-isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042952">
        <property type="term" value="P:beta-ketoadipate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026029">
        <property type="entry name" value="MLI_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003464">
        <property type="entry name" value="Muconolactone_d_Isoase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02426">
        <property type="entry name" value="MIase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001486">
        <property type="entry name" value="CatC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03221">
        <property type="entry name" value="muco_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0058">Aromatic hydrocarbons catabolism</keyword>
    <keyword evidence="7 9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MIase" evidence="8">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001739"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010882"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022797"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR001486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="11265" checksum="2B88D896AD512C02" modified="2018-04-25" version="1">MLYHVVMDVRIPRDLPPEEVAEIVTREKAYSQDLQRSDKWRHIWRIAGQYANVSILDVRDNAELHEILSGLPLFKFMDIKVTPLLRHPSAIREDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR3</accession>
    <name>A0A2M9PDR3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE</fullName>
            <ecNumber evidence="6">2.1.1.163</ecNumber>
            <ecNumber evidence="6">2.1.1.201</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">2-methoxy-6-polyprenyl-1,4-benzoquinol methylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Demethylmenaquinone methyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ubiE</name>
        <name evidence="7" type="ORF">CNY89_07210</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2-demethylmenaquinol + S-adenosyl-L-methionine = a menaquinol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:42640"/>
            <dbReference type="Rhea" id="RHEA-COMP:9539"/>
            <dbReference type="Rhea" id="RHEA-COMP:9563"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18151"/>
            <dbReference type="ChEBI" id="CHEBI:55437"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="EC" id="2.1.1.163"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a 2-methoxy-6-all-trans-polyprenyl-1,4-benzoquinol + S-adenosyl-L-methionine = a 6-methoxy-3-methyl-2-all-trans-polyprenyl-1,4-benzoquinol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:28286"/>
            <dbReference type="Rhea" id="RHEA-COMP:10858"/>
            <dbReference type="Rhea" id="RHEA-COMP:10859"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:84166"/>
            <dbReference type="ChEBI" id="CHEBI:84167"/>
            <dbReference type="EC" id="2.1.1.201"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Quinol/quinone metabolism; menaquinone biosynthesis; menaquinol from 1,4-dihydroxy-2-naphthoate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.163" evidence="6"/>
    <dbReference type="EC" id="2.1.1.201" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000360">
        <property type="protein sequence ID" value="PJN95648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00079">
        <property type="reaction ID" value="UER00169"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043333">
        <property type="term" value="F:2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043770">
        <property type="term" value="F:demethylmenaquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102094">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102955">
        <property type="term" value="F:S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102027">
        <property type="term" value="F:S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009060">
        <property type="term" value="P:aerobic respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009234">
        <property type="term" value="P:menaquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01813">
        <property type="entry name" value="MenG_UbiE_methyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004033">
        <property type="entry name" value="UbiE/COQ5_MeTrFase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023576">
        <property type="entry name" value="UbiE/COQ5_MeTrFase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01209">
        <property type="entry name" value="Ubie_methyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01934">
        <property type="entry name" value="MenG_MenH_UbiE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51608">
        <property type="entry name" value="SAM_MT_UBIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01183">
        <property type="entry name" value="UBIE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01184">
        <property type="entry name" value="UBIE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0474">Menaquinone biosynthesis</keyword>
    <keyword evidence="2 6 7" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3 6 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 6" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="region of interest" description="S-adenosyl-L-methionine binding" evidence="6">
        <location>
            <begin position="127"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022428"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="255" mass="28468" checksum="3C37C8A7893E1EC7" modified="2018-04-25" version="1">MQDPSDPSDARTTHFGFETVPEAEKAGRVHGVFSSVAGRYDVMNDAMSLGIHRLWKDAMLDWLAPRPGMRALDVAGGTGDIAFRLMDRAKGQARVSVLDLTEAMLVEGRKRAAERPWADRLDWIVGDAMALPFESGTFDAYTIAFGIRNVTRPEQALAEAYRVLRPGGRLLVLEFSRVPNEALRRVYDLYSFNVIPPLGQALAGDRDSYRYLVESIRRFPDQETFAGMIRDAGFGRVQYRNLSMGVAALHSGWKI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ6</accession>
    <name>A0A2M9PDZ6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Na_H_Exchanger domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_06775</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000328">
        <property type="protein sequence ID" value="PJN95728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015299">
        <property type="term" value="F:solute:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006153">
        <property type="entry name" value="Cation/H_exchanger"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018422">
        <property type="entry name" value="Cation/H_exchanger_CPA1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10110">
        <property type="entry name" value="PTHR10110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00999">
        <property type="entry name" value="Na_H_Exchanger"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0915">Sodium</keyword>
    <keyword evidence="5" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="1 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="31"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="170"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="249"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="255"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="Na_H_Exchanger" evidence="7">
        <location>
            <begin position="11"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="275" mass="28231" checksum="4EB333A1A32EFD44" modified="2018-04-25" version="1" fragment="single">MTVQAAVLLIASLVAIGALAAPLAERVRLPVSVLYAATGLLLGLIGVATAGGWQVGVPISVAAVLADLPVGSALFLHVLLPTLLFQGALAVDIQRMRDDLLPILLLALLAVVVAIFGIGLALWPASGLPLVACLLLASVVATTDPVAVISIFRSVGAPERLTRLVEGESLFNDAAAVAFFIAFTGLIVSPGRIDAFGFAADLALLPLGGAILGYLLARLLLHLPRRLREDRVAFASLSLALPFLTFWLAEVGLHVSGVLAVVAAGVTLATLAPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE37</accession>
    <name>A0A2M9PE37_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06300</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000297">
        <property type="protein sequence ID" value="PJN95809.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014980787" evidence="2">
        <location>
            <begin position="23"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95809.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12186" checksum="2C74A7BF1BD34554" modified="2018-04-25" version="1">MRRTLTLLVTSTALTAAIGVPAWSAMHAPDDGSLWPVAAPIEERTHALHLALASDDDDDSRGFAQNSRRGHDDDENDDDCEDDCPSGARNPAPAGDVAPPQNGLFGNGASPQVQVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE63</accession>
    <name>A0A2M9PE63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Manganese/iron transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06165</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000289">
        <property type="protein sequence ID" value="PJN95831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="11"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="44"/>
            <end position="51"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="284" mass="31259" checksum="335E07E3CBEA04D1" modified="2018-04-25" version="1">MIPPQPRKPGLSVRDVSVTYRNGNRALDDATFDLPEGSITALVGVNGSGKSTLFKAIMGFLPLRSGHVEVLGLDRDAALRRNLVAYVPQAEEVDWTFPILVEDVVMMGRYGHMGWLRRPAPRDREMVAEALERVGMSDFADRQIGELSGGQKKRVFLARALAQEGRVILLDEPFTGVDVTTEEAIIALLRDLRDEGRVMLISTHNLGSVPDFCDRAVLVAGRVLAAGPTAQVFTQANLEQAFGGKLRHFVLGGQDLHEDADARRVTVLTDDERPFVIYDEGPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED1</accession>
    <name>A0A2M9PED1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">UDP-galactopyranose mutase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000261">
        <property type="protein sequence ID" value="PJN95910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008767">
        <property type="term" value="F:UDP-galactopyranose mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015899">
        <property type="entry name" value="UDP-GalPyranose_mutase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03275">
        <property type="entry name" value="GLF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GLF" evidence="1">
        <location>
            <begin position="76"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="301" mass="34838" checksum="AE7F97C73F8270F0" modified="2018-04-25" version="1" fragment="single">TDWRPYEHRVLADLGGGLRLPMPINRTTLAGIFGRPLPDDAAAEALLRDLAEPMTTVRSARDMVISTVGRRLYETFFEGYTRKQWGIDPSDLDKSVTARVPARASLDDRYFLDRFQAMPREGYTRMFERMVDHERIDLALGTDFHDLAREILAPLTIYTGPIDRYFDHRFGRLPYRSLEFRHETHDRRRFQEVATVNYPDAAMPWTRITEYKYLTGQRHPQTSITYEFARADGDPFYPIPRAENRALYRQYEALARTIPGLHFVGRLGTYQYYNMDQVVAQALATYRRLEAGEAAQIAAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE8</accession>
    <name>A0A2M9PEE8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Thioredoxin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05655</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000258">
        <property type="protein sequence ID" value="PJN95919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015036">
        <property type="term" value="F:disulfide oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013740">
        <property type="entry name" value="Redoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08534">
        <property type="entry name" value="Redoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="2" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="3" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015006661" description="Thioredoxin domain-containing protein" evidence="4">
        <location>
            <begin position="48"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="domain" description="Thioredoxin" evidence="5">
        <location>
            <begin position="66"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="185" mass="19550" checksum="C6F71A240D659F22" modified="2018-04-25" version="1" fragment="single">MVFAFVLSLMRPCPNFARKAPPVILRALTIPLLVYTAALAAANPALAEGADLAALREGDMRKLVVADDPLPAPDVPFTAPDGTETTLAASDGKVRLVNFWATWCAPCREEMPALQALQQDLGGEDFEVLLVATGRNAPEGIARFFAEEGITMQTALDPKGALGRAAGIAGLPVTLILDREGREIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI7</accession>
    <name>A0A2M9PEI7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1176 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000252">
        <property type="protein sequence ID" value="PJN95932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014864132" evidence="1">
        <location>
            <begin position="18"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="14850" checksum="BCC8E22B105C3012" modified="2018-04-25" version="1" fragment="single">MILRTFVLALAAAPAFADEPAYRDDRSDAAALIGSLYNAIDRQEYARAWGYFDDPKPAASFEAFTQGYAGTAGVELRTGASVSDGAAGSVYFEVPVAIRATDAQGATRVFAGCYVVRQVDPAIQEPPFRPLLIVSGKLAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM9</accession>
    <name>A0A2M9PEM9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nucleoside/nucleotide kinase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000227">
        <property type="protein sequence ID" value="PJN96010.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006083">
        <property type="entry name" value="PRK/URK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00485">
        <property type="entry name" value="PRK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PRK" evidence="1">
        <location>
            <begin position="24"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96010.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="220" mass="24330" checksum="375F93B645928572" modified="2018-04-25" version="1">MTESLDLAGLADRLIASQGPKRRIVAVAGAPGSGKSTFAERLRDRIAERLPVEVVPMDGFHYDDMVLEARGWRPRKGAPHTFDVDGFGAMLDRLRADDGRDVAIPVFDRSIEIARAGARIITPEARLLIAEGNYLLLDDPDWALLRDRFDATVFLDVPEDEIEARLLDRWQGYGLDEAAIAAKLQENDLPNALLVMLRSVPADFVVKNVDRAPSDRVNTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP7</accession>
    <name>A0A2M9PEP7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_04970</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000219">
        <property type="protein sequence ID" value="PJN96030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="35"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="107"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="20696" checksum="95B998ECEBDB258C" modified="2018-04-25" version="1">MAACSSSPWAPPRTRTARSTSSTCWRWHRALRAPLVFQAVFIGVAGINAAKMLLGRASWRIASDLPQGFGLRIYGFVIGLLSALMGIGGGALSTLTMTLHGRPIHQSVATSAGVGVFISIPGALGYMAAGWGRADLPPFSIGFVSALAFALIVPTTLMTTQIGVNLAHALPRRKLELLFGLFLLAVCLRFVYAIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ0</accession>
    <name>A0A2M9PEQ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cell division protein ZapE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05200</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000233">
        <property type="protein sequence ID" value="PJN95992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005654">
        <property type="entry name" value="ATPase_AFG1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12169">
        <property type="entry name" value="PTHR12169"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03969">
        <property type="entry name" value="AFG1_ATPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="3" id="KW-0132">Cell division</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9770" checksum="BB295A90F3972D1C" modified="2018-04-25" version="1" fragment="single">PLGPADYLALAEAVEVLILDDVPCLRASQANEAKRFVTLIDALYEAKVRLIASAETTPESLYLEGTGAFEFARTVSRLSEMRSLDWPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU7</accession>
    <name>A0A2M9PEU7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sulfonate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04790</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000209">
        <property type="protein sequence ID" value="PJN96061.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="24"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="58"/>
            <end position="65"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96061.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="276" mass="29978" checksum="25B6E21F8D8CE667" modified="2018-04-25" version="1">MGADEERRGADPGTGPAVGPVIDAQRLDLVFQTGDGPVHALRDVTLRVDRGDFVSFIGPSGCGKTTFLRVAADLEQPTGGSITVNGVSPAEARKARAYGYVFQAAGLFPWRTIAGNVRLPLEIMGYPKAEQEGRVARALELVELSGFARKYPWQLSGGMQQRASIARALCFDADLLLMDEPFGALDEIVRDKLNEQLLALWARTGKTICFVTHSIPEAVYLSTRIVVMSPRPGRVTDVIESPLPRERPLHIRESAEFLAIAARVRDGLRAGIGDEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW1</accession>
    <name>A0A2M9PEW1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000198">
        <property type="protein sequence ID" value="PJN96097.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.280.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023620">
        <property type="entry name" value="SmpB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000037">
        <property type="entry name" value="SsrA-bd_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020081">
        <property type="entry name" value="SsrA-bd_prot_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30308">
        <property type="entry name" value="PTHR30308"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01668">
        <property type="entry name" value="SmpB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74982">
        <property type="entry name" value="SSF74982"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01317">
        <property type="entry name" value="SSRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96097.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6805" checksum="98815109C61CA9B4" modified="2018-04-25" version="1">MAKQPERPQKIVAENRRARHNYFIEDDLEAGIMLEGSEVKSLRTGKANIGESYATVEGGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA8</accession>
    <name>A0A2M9PFA8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">NADH-quinone oxidoreductase subunit B</fullName>
            <ecNumber evidence="9">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">NADH dehydrogenase I subunit B</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">NDH-1 subunit B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">nuoB</name>
        <name evidence="12" type="ORF">CNY89_03940</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">NDH-1 is composed of 14 different subunits. Subunits NuoB, C, D, E, F, and G constitute the peripheral sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Peripheral membrane protein</topology>
            <orientation evidence="9">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9 10">Belongs to the complex I 20 kDa subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000167">
        <property type="protein sequence ID" value="PJN96202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01356">
        <property type="entry name" value="NDH1_NuoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006137">
        <property type="entry name" value="NADH_UbQ_OxRdtase-like_20kDa"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006138">
        <property type="entry name" value="NADH_UQ_OxRdtase_20Kd_su"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01058">
        <property type="entry name" value="Oxidored_q6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01957">
        <property type="entry name" value="nuoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01150">
        <property type="entry name" value="COMPLEX1_20K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 9 10" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="1 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 9 10" id="KW-0408">Iron</keyword>
    <keyword evidence="9 10" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="4 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0520">NAD</keyword>
    <keyword evidence="3 9" id="KW-0874">Quinone</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-1278">Translocase</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <keyword evidence="7 9" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="Oxidored_q6" evidence="11">
        <location>
            <begin position="60"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="60"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="61"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="125"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022719"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="181" mass="19679" checksum="A0C5EBE7FB5DFE29" modified="2018-04-25" version="1">MGVTSPALSTQPVAAPGSEAVTRALSNELADKGFLVTSTADVINWARTGSLHWMTFGLACCAVEMMHTSMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALLYGILQLQRKIRRTGTIVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD6</accession>
    <name>A0A2M9PFD6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SfsA_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000151">
        <property type="protein sequence ID" value="PJN96257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005224">
        <property type="entry name" value="SfsA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041465">
        <property type="entry name" value="SfsA_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30545">
        <property type="entry name" value="PTHR30545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17746">
        <property type="entry name" value="SfsA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SfsA_N" evidence="1">
        <location>
            <begin position="13"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6877" checksum="C4C8BD66633251A0" modified="2018-04-25" version="1">MKFANSLQRGRLVRRYKRFLADVMMDDGREVTAHVANPGAMLGLNAPGLPVWLEPNDGPGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE3</accession>
    <name>A0A2M9PFE3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L33</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 6" type="primary">rpmG</name>
        <name evidence="6" type="ORF">CNY89_03585</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL33 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000148">
        <property type="protein sequence ID" value="PJN96267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.20.28.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00294">
        <property type="entry name" value="Ribosomal_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038584">
        <property type="entry name" value="L33_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001705">
        <property type="entry name" value="Ribosomal_L33"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018264">
        <property type="entry name" value="Ribosomal_L33_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00471">
        <property type="entry name" value="Ribosomal_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01023">
        <property type="entry name" value="rpmG_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00582">
        <property type="entry name" value="RIBOSOMAL_L33"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6368" checksum="C56A89934DD8E1DD" modified="2018-04-25" version="1">MAKPTTIKIRLNSTADTGHFYVTKKNARTMTEKMVVNKYDPVARKHVEYKEGKIK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK9</accession>
    <name>A0A2M9PFK9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03105</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000125">
        <property type="protein sequence ID" value="PJN96340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="68"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="100"/>
            <end position="107"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="35198" checksum="84400E1E66BC449F" modified="2018-04-25" version="1">MRFYWANRLSGPGIRPRRPDPALRRAQFLAQTVDGSPPARLTRGDEQGDTDVAALTESAAGPLRNVALDVRDIYKRFGDFEVLKGISLTAREHDVVAILGSSGSGKSTFLRCINLLETPTSGQIRVKGELIEMGTRRGEPCPQDPKQVERIRAKLSMVFQQFNLWQNMTVLENVAAAPIHVLGLPKAEARDKAEAMLRKVGVSDKLGHYPTQLSGGQQQRVAIARALAMDPEVILFDEPTSALDPELVNEVLKVMRQLAEEGRTMLIVTHEMGFAREVANRMMFLHQGLVEEEGNPREIMANPTSVRFRQFMSGSLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR2</accession>
    <name>A0A2M9PFR2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Transketolase_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000116">
        <property type="protein sequence ID" value="PJN96368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033247">
        <property type="entry name" value="Transketolase_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43522">
        <property type="entry name" value="PTHR43522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transketolase_C" evidence="1">
        <location>
            <begin position="40"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="15997" checksum="C8A85156F2AA9BFC" modified="2018-04-25" version="1">MGTVDGPVLLVLSRQNLPLVRENVETNRTAEGAYLLRCPDERDVTLIATGSEVEIALAAADALASGGVHAAVVSAPCFERFAARPEAERAELLGTAPRIGVEAAIRQGWDLFLRPGDGFVGMTGFGASAPAPALYEHFGITAAAVADLARKLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV7</accession>
    <name>A0A2M9PFV7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aldo/keto reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000100">
        <property type="protein sequence ID" value="PJN96433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="6"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="27000" checksum="B95213E6247699BB" modified="2018-04-25" version="1" fragment="single">RDGAPISPATLRTALEGSLTRLRTDHVDLYQLHWPNRGSYHFRQNWSFDPSRQSRSEPDRLAEIVETLGAFVAEGKIRAWGLSNDSAWGTGKAIGLAEAAGLPRPASIQNEYSLVCRHFDLDLAELCRHEDVGLLAYSPLAAGMLTGKYLDDALPAGARATINKGLAGRLGPHSQPAVAEYVALARDHGLDPAQMALAFCAERPFMASVILGATSLDQLRTDLGAAEVTLTDEIRAGIAEIRRRHPMPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX1</accession>
    <name>A0A2M9PFX1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000094">
        <property type="protein sequence ID" value="PJN96450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="5"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="342" mass="37043" checksum="808D5075035C9071" modified="2018-04-25" version="1">MTPLRTLVAGLGNMGQSHALAYHANPAFQIVGLVNRSEPDLPEALAGYPLAADYAEALARLEPDLVSIATYSDSHADYAVAALEAGAHVFVEKPLATTTADAERVAEAARRTGRKVVVGYILRHHPSWRRLIAESRALGGPYVFRLNLNQQSSGPTWETHKALMRTTSPIVDCGVHYVDVMCQITDAAPVEVRGMGLRLSQDIAPDMYNYGHFQVLFADGSLGWYEAGWGPMMSDTAFFVKDVVSPNGAVSIRMPESARSDDIDTHTRTSLIRLHKVGEPDQDLSMADEPGHQDLCDREAAFLADAIAADLDLTRHLRDAVASLAVCLAADESVRSGLPVKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG56</accession>
    <name>A0A2M9PG56_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000074">
        <property type="protein sequence ID" value="PJN96523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="18951" checksum="00003C790EDB5D75" modified="2018-04-25" version="1">MNCETSARTVLVSLTISFVEALLNMHSALDDEIVFTLGESVRRTPASTTTLSHQPILDAVISERGKYAAEFLGVAFSANTLAQVFGRIVDMTAFVAPEALVSLATIHTRGRRHISLKPNEIHPHSPHLPVMQTKSGWWISKNISQDQLRQALRTLCKVSGLSFGKDLKFPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG80</accession>
    <name>A0A2M9PG80_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01920</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000070">
        <property type="protein sequence ID" value="PJN96541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="226"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="256"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="310"/>
            <end position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="337" mass="34767" checksum="C4411CAF8BCDFA62" modified="2018-04-25" version="1">MADTPPGLTRFLKGLPGGHLGLLGLLAALVLFFAALVPNFLSQGTLNSFMYQLPLLGLLSLAMVVPLLTGGLNLAIIATMNQCALLMVWIMRTLIPPASGAGLTLAVVALALIAGLLLCVAIGLFIGALVAYTGVHPILVTLGAKSLIDGISIYLTRGMALSGVPEPVSAALNASLLGMPAIFLLLIVAAIVIGVILRHTPFGLACAMIGSNMEATRYSAIDTRRVLVGVYTLSSVTCFFAALVVIATFNSASADYAQSYLLVTILAAVLGGVDPFGGFGTVSGLMIALAILQVISSGLNQFGLSTYLTVAIWGGVLIAVVFAQTALAWLPSLRDRK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG93</accession>
    <name>A0A2M9PG93_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Peptide-methionine (S)-S-oxide reductase</fullName>
            <ecNumber evidence="3">1.8.4.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">msrA</name>
        <name evidence="6" type="ORF">CNY89_01770</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>[thioredoxin]-disulfide + H2O + L-methionine = [thioredoxin]-dithiol + L-methionine (S)-S-oxide</text>
            <dbReference type="Rhea" id="RHEA:19993"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:58772"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[thioredoxin]-disulfide + H2O + L-methionyl-[protein] = [thioredoxin]-dithiol + L-methionyl-(S)-S-oxide-[protein]</text>
            <dbReference type="Rhea" id="RHEA:14217"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="Rhea" id="RHEA-COMP:12313"/>
            <dbReference type="Rhea" id="RHEA-COMP:12315"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16044"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:44120"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="EC" id="1.8.4.11"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.4.11" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000064">
        <property type="protein sequence ID" value="PJN96568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033744">
        <property type="term" value="F:L-methionine:thioredoxin-disulfide S-oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008113">
        <property type="term" value="F:peptide-methionine (S)-S-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002569">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036509">
        <property type="entry name" value="Met_Sox_Rdtase_MsrA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01625">
        <property type="entry name" value="PMSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55068">
        <property type="entry name" value="SSF55068"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00401">
        <property type="entry name" value="msrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PMSR" evidence="5">
        <location>
            <begin position="25"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15080" checksum="0C04522FD91EB4BF" modified="2018-04-25" version="1">MLGLYFLTAAMAAAQPAPPPADQVAIFSGGCFWCLEDKLSQVPGVANVETGYVGGTRAQPSYREVSSGETDHILAVRVFFDPTKVTYAQLLQVYWVQIDPTDAGGQFCERGAQHRAAIFPLPADMRTEPSDFSLSCFMP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB9</accession>
    <name>A0A2M9PGB9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Electron transfer flavoprotein subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01730</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ETF beta-subunit/FixA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000063">
        <property type="protein sequence ID" value="PJN96572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01714">
        <property type="entry name" value="ETF_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000049">
        <property type="entry name" value="ET-Flavoprotein_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014730">
        <property type="entry name" value="ETF_a/b_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012255">
        <property type="entry name" value="ETF_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033948">
        <property type="entry name" value="ETF_beta_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21294">
        <property type="entry name" value="PTHR21294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01012">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000090">
        <property type="entry name" value="Beta-ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00893">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01065">
        <property type="entry name" value="ETF_BETA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ETF" evidence="3">
        <location>
            <begin position="23"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="26649" checksum="3A7202F71D0CED79" modified="2018-04-25" version="1">MKILVPVKRVIDYNVKARVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGAASEIVVVSIGVKQAQETLRTALAMGADRAILIVAAEDAATDVEPLAVAKLLKAVIDAEQPGLVLAGKQAIDNDMNATGQMLAALLDWPQATFASEVVLGNGKATVTREVDGGLQTIEVKLPAVITVDLRLNEPRYASLPNIMKAKKKPLEEKTPADYGVDVAPRLQVVKVTEPGARKGGVKVGSVDELIAKLKAEGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC5</accession>
    <name>A0A2M9PGC5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spermidine/putrescine ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01615</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000058">
        <property type="protein sequence ID" value="PJN96597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014780174" evidence="4">
        <location>
            <begin position="24"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="359" mass="38580" checksum="DC3DAD82136D3D38" modified="2018-04-25" version="1">MKRRLTAAASALALMAAAVPAMAEEVTVMSWGGAYAKSQIEAYYKPFTAETGIEIVSVDADNPATPIKAMVEAGNVTVDVADVEFADAVRLCDEGLLEEIDHSILAPGADGSAPADDFVPGSLVDCFVPTIVYTIAVAYDTTKFPEKPTSVADFFDLEKFPGKRSMRRNAKSNLEMALMADGVPAAEVYDVLGTPEGVDRAFAKLDTIKKDIVWWEAGAQAPQLLADGEVTMAAAFNGRIFAAAIGEGKPFEILWDGQVYETEGYVIPKGAKNVEGALKFIAFASQPQQLADQASWISYGPARKSSGPLVGMYQDGKTDMKPHMPTAEANLVNALPSSYEFWVDHDSELNERFNAWLAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK3</accession>
    <name>A0A2M9PGK3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage Gp37/Gp68 family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000040">
        <property type="protein sequence ID" value="PJN96670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011101">
        <property type="entry name" value="DUF5131"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07505">
        <property type="entry name" value="DUF5131"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="377" mass="42092" checksum="BBDCB58D7771B3FB" modified="2018-04-25" version="1">MAEKTSIEWTRGPDGSPGATWNPITGCTLVSEGCRHCYAAQLAATRLKNHPSRAGLARLNAAGEAKFTGEVRLNEQWLVEPLRWRRPRRIFVCAHGDLFHEGVPDEWVDRVFAVMALAPQHTFQVLTKRPERARSYMLGLELNWERRLVDRGAADFGDEVACFIANFINGWIAPRGTPFAGDPANGSCERWPLPHVWLGTSVEDEATADARIPHLLAAPAAVRFLSAEPLLGPVDLTEIAVPRPDLRASVVLDVLRGWGGPINRLDWVIVGGESGKHARPMHPDWVRALRDQCQAAGVAFFFKQWGEWVPGEIAGPNTRSIDAATWWDRQWMIERVGPARPDDHIDDEPDLFRVGKKAAGRVLDGRTWDQMPREPQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN9</accession>
    <name>A0A2M9PGN9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8 9">Nicotinate phosphoribosyltransferase</fullName>
            <shortName evidence="8">NAPRTase</shortName>
            <ecNumber evidence="4 8 9">6.3.4.21</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 12" type="primary">pncB</name>
        <name evidence="12" type="ORF">CNY89_00900</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8 9">
            <text>5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O + nicotinate = ADP + diphosphate + nicotinate beta-D-ribonucleotide + phosphate</text>
            <dbReference type="Rhea" id="RHEA:36163"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:32544"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57502"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.21"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8 9">Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from nicotinate: step 1/1.</text>
    </comment>
    <comment type="PTM">
        <text evidence="8 9">Transiently phosphorylated on a His residue during the reaction cycle. Phosphorylation strongly increases the affinity for substrates and increases the rate of nicotinate D-ribonucleotide production. Dephosphorylation regenerates the low-affinity form of the enzyme, leading to product release.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8 9">Belongs to the NAPRTase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.21" evidence="4 8 9"/>
    <dbReference type="EMBL" id="PHNO01000030">
        <property type="protein sequence ID" value="PJN96719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00457"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004516">
        <property type="term" value="F:nicotinate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004514">
        <property type="term" value="F:nicotinate-nucleotide diphosphorylase (carboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00570">
        <property type="entry name" value="NAPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041525">
        <property type="entry name" value="N/Namide_PRibTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040727">
        <property type="entry name" value="NAPRTase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006406">
        <property type="entry name" value="Nic_PRibTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007229">
        <property type="entry name" value="Nic_PRibTrfase-Fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036068">
        <property type="entry name" value="Nicotinate_pribotase-like_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11098">
        <property type="entry name" value="PTHR11098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04095">
        <property type="entry name" value="NAPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17767">
        <property type="entry name" value="NAPRTase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000484">
        <property type="entry name" value="NAPRT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51690">
        <property type="entry name" value="SSF51690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01514">
        <property type="entry name" value="NAPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 8 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7 8 9" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="NAPRTase_N" evidence="11">
        <location>
            <begin position="22"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="NAPRTase" evidence="10">
        <location>
            <begin position="187"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="modified residue" description="Phosphohistidine; by autocatalysis" evidence="8">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004952"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF04095"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF17767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="48901" checksum="CA06BD9A890DA8B1" modified="2018-04-25" version="1">MDIATRVYDHAWRIDPIVRSLMDTDFYKLLMLQTVFQRHAGVEVEFSLINRTQSVPLARLIDEGDLRAQLDHIRGLRLSRGESTWLRGNTFYGKRQMFSPEFMEWLEAFEMPDYHLERKGDQYELTFRGSWPRVMMWEIPALAVIMELRSRAVLKGMGRFELQVLYAQAMTRVWEKIERLKALPDLRISDFGTRRRHSFLWQDWCVQAMIEGLGERFTGSSNCLIAMRRDIEAIGTNAHELPMVTAALAESDAELREAPYRVLEQWHQDYDGNLRIILPDTYGTAGFLAGAPDWLASWTGIRIDSGSPEEGAEAAIAWWESRGQDPREKLVIFSDGLDVDRIEALYARFHGRVKIGFGWGTLLTNDFRGLAPGDGLRPFSLVCKAVSANGRPTVKLSDNPGKAMGPADQIERYKRVFGVGAQVAEPVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ6</accession>
    <name>A0A2M9PGQ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Protein GlxC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000027">
        <property type="protein sequence ID" value="PJN96728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002489">
        <property type="entry name" value="Glu_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036485">
        <property type="entry name" value="Glu_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012061">
        <property type="entry name" value="Glu_synth_lsu_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01493">
        <property type="entry name" value="GXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006519">
        <property type="entry name" value="GOGAT_dom3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69336">
        <property type="entry name" value="SSF69336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GXGXG" evidence="1">
        <location>
            <begin position="44"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01493"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="23567" checksum="35B08E505407709F" modified="2018-04-25" version="1">MPTFDLAETPLRALNAALHALAPGDDDTAFEVVNPRGAHALAVGIDQPLTVAVRGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMAGSVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDIVVHGSIGHMSAFMAQSGNLVVLGDAGEALGDSLYEARLFVRGDVRSLGADCVEKEMRPEHLEILADLLAKAEADARPEEFRRYGSARTLYNFNIDNADAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR6</accession>
    <name>A0A2M9PGR6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000041">
        <property type="protein sequence ID" value="PJN96664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046912">
        <property type="term" value="F:acyltransferase activity, acyl groups converted into alkyl on transfer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016142">
        <property type="entry name" value="Citrate_synth-like_lrg_a-sub"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002020">
        <property type="entry name" value="Citrate_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036969">
        <property type="entry name" value="Citrate_synthase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00285">
        <property type="entry name" value="Citrate_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00143">
        <property type="entry name" value="CITRTSNTHASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48256">
        <property type="entry name" value="SSF48256"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="282"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="320" mass="35059" checksum="1C277762599541F4" modified="2018-04-25" version="1">MTNQAHQSAKLTFGDTTLDLPMYKGTIGPDVIDIRSLYSQGGVFTYDPGFTSTGSCESAITYIDGDVGELLYRGYPIEQLAEKSHFLEVCYLLLYGELPTAAQLEDFESRVTNHTMLHEQMAYFFRGFRRDAHPMAIVCGVMGAMSAFYHDSTDINDAWQREVASIRLIAKMPTIVAWAYKYSVGQPFVYPKNSLDYASNFLNMCFSVPAADYVVDPILSRAMDRIFTLHADHEQNASTSTVRLASSSGANPFACIAAGVACLWGPPMAAPTRPVSRCCARSARSTASRNTSPGPRTRTIPSSSWASATGSTRTSTRAPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS1</accession>
    <name>A0A2M9PGS1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">3-hydroxyisobutyrate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000025">
        <property type="protein sequence ID" value="PJN96736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029154">
        <property type="entry name" value="NADP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14833">
        <property type="entry name" value="NAD_binding_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD_binding_11" evidence="1">
        <location>
            <begin position="37"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="18692" checksum="29AE3A41F7473505" modified="2018-04-25" version="1" fragment="single">GGGILIANPIPAEAALERARPLFEAMGSRLVHCGGPGAGQAAKICNNMILGVTMTAVCEAFALADKLGLDRARLYDVVSTSSGSCWSVNAYCPAPGVGPASPADAGYAPGFAAELMLKDLMLAQSAAQAADAATPLGAAAAAIYAEFLEDGGRGRDFSALLPWLEKKTHDMRAAGNKAQPATLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS9</accession>
    <name>A0A2M9PGS9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00670</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000020">
        <property type="protein sequence ID" value="PJN96759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="149"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="200"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="232"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="266"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="31391" checksum="1CB59F69041B6CE6" modified="2018-04-25" version="1">MFDLLGVPPQALFGQLLLGLINGSFYAMLSLGLAVIFGQLNIINFTHGAQYMMGAFAAWMLSAYLGLGYWWALLLAPLIVGAIGIVLERLLLSRLYHLDHLYGLLLTFGLALIIQGLLRNGYGVSGLPYPTPKLLTGGQNLGFMFLPNYRAWVVVASLIACFGTWFLIEKTRLGSYLRAATENPSLVGAFGINVPRLITLTYGFGVGLAAFAGVLAAPIYSVNPNMGADLIIVVFAVVVIGGMGSILGAIVTGFGLGIVEGLTRVFYPEGSAVVIFVIMAIVLLVKPQGLFGRAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH23</accession>
    <name>A0A2M9PH23_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9937" checksum="1D6419BB17637AB9" modified="2018-04-25" version="1">MTAGPLHSGESLHFLTEDGAFADTNGWPVEVAECAEFDKPLPVRAFGVWLGKLGDTPRIRDLTAEFETAVYEAMRPEAGVPSSYVIRNGKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH53</accession>
    <name>A0A2M9PH53_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Trk system potassium uptake protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_00110</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell inner membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the TrkH potassium transport family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000003">
        <property type="protein sequence ID" value="PJN96866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015379">
        <property type="term" value="F:potassium:chloride symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004772">
        <property type="entry name" value="TrkH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006247">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 10" id="KW-0630">Potassium</keyword>
    <keyword evidence="4 9" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="7"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="39"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="71"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="135"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="180"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="271"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="322"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="393"/>
            <end position="416"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="455"/>
            <end position="480"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="220"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="315"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="431"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR006247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR006247-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="482" mass="51488" checksum="5FC9BCD30C55443A" modified="2018-04-25" version="1">MIDVRPVGYVIGWLVTAFGVSMLAPLLADLALHEEREMVFAYCAILTTLCGAAMTLACANAEVRSLTIQQSFLFACGIWVVFPLFGALPFILGEPDATAVDALFESMSALTTTGGTVFTHLETLPPGTLLWRGQMQWFGGLGIVVVAIVFLPTLKVGGMQFFRSEAFDTLGKILPRATEIAMSLTSIYLATTVACIAGYLWTGMTPFDALVHALSTVSTGGMANYDASFGQFGTGSQYVAIVFMILAALPFVRYIQLVAGSARPLLTDSQVRAFFAIMAVFVLALVWRMMVEKTMPPGEAFRHALFNVVSVVTGTGFSSIDYGAWGAFAIALFFVLGLIGGCSGSTACSVKVFRYQLLISAVVAEVRRLHSPNRVILPRYQGRPVDDETMNSVMAFFMLFYLTLGLLTVLLIMLGLPPLTAISSAATALANIGPGLGDEVGPAGNFAGLNDAAKAVLTLAMLLGRLELLSVLVILTPAFWRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P488</accession>
    <name>A0A2M9P488_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar biosynthesis repressor FlbT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004787">
        <property type="protein sequence ID" value="PJN92354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048027">
        <property type="term" value="F:mRNA 5'-UTR binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902209">
        <property type="term" value="P:negative regulation of bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009967">
        <property type="entry name" value="Flagellum_FlbT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07378">
        <property type="entry name" value="FlbT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="37"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7897" checksum="B8C148607971C3FA" modified="2018-04-25" version="1" fragment="single">KLGPRERIMVNGVVLENGDRRARINILTPDAHVLRLQARPARADHGQRRRAGERRPPGPDQHPDARRPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B0</accession>
    <name>A0A2M9P4B0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004771">
        <property type="protein sequence ID" value="PJN92359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="5034" checksum="A79CFEF62DA95847" modified="2018-04-25" version="1" fragment="single">MWPAKFLILLGFVILVFQGVSEIIKSIAILRGDLPLPPDGEEEHM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T0</accession>
    <name>A0A2M9P4T0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Homoserine_dh domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_28885</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="3">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004223">
        <property type="protein sequence ID" value="PJN92530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001342">
        <property type="entry name" value="HDH_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00742">
        <property type="entry name" value="Homoserine_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Homoserine_dh" evidence="4">
        <location>
            <begin position="31"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN92530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8637" checksum="B2E66483731070FC" modified="2018-04-25" version="1" fragment="single">ERVSLADIRAAADMGYRVKLLGVARMTAQGLAALAFGTRVDFEGVAIEGIERVSLADIRAAADMGYRVKLLGVARMTAQGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P510</accession>
    <name>A0A2M9P510_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003952">
        <property type="protein sequence ID" value="PJN92622.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92622.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9768" checksum="8A722D0F2DF5B8D2" modified="2018-04-25" version="1" fragment="single">PQKLVSYFGLNPRVRQSGLGAAHHGRISKVGRSHARAMLVEAAWAAAKAPGPLHAFFVRIRAKRGHQVAAVALARKLTVLCWHLLTREE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5B2</accession>
    <name>A0A2M9P5B2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase</fullName>
            <ecNumber evidence="2">5.3.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HisA/HisF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.16" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003619">
        <property type="protein sequence ID" value="PJN92744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003949">
        <property type="term" value="F:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5222" checksum="FDAEDEC75DD3DC9D" modified="2018-04-25" version="1" fragment="single">AVAIPVIASGGVSSLADLQALKDSGAPLDGAISGRALYEGKLDLAEAVALLEGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E6</accession>
    <name>A0A2M9P5E6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003553">
        <property type="protein sequence ID" value="PJN92762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7106" checksum="C3AD9F778C7C2214" modified="2018-04-25" version="1" fragment="single">EPRRVGGSPTLPTPDSRRSDLDDGENRCGLDALDGLAANGPDANDAVEAAVKAKVQALCDRFPIYPGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E9</accession>
    <name>A0A2M9P5E9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Site-specific DNA-methyltransferase (adenine-specific)</fullName>
            <ecNumber evidence="2">2.1.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27030</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.72" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003610">
        <property type="protein sequence ID" value="PJN92745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003356">
        <property type="entry name" value="DNA_methylase_A-5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02384">
        <property type="entry name" value="N6_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N6_Mtase" evidence="3">
        <location>
            <begin position="8"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11359" checksum="CF003EDB6667EDB2" modified="2018-04-25" version="1" fragment="single">DPQAKQRLIVELYDKFFEAFPRTTEKLGIVYTPVEIVDFIIHSVNEMLLKHFGQTLGSKGVHILDPFVGTGTFITRLLQSGLIGPEEMERKYREELHAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G8</accession>
    <name>A0A2M9P5G8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003567">
        <property type="protein sequence ID" value="PJN92758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11087" checksum="F124AAE6607DAA41" modified="2018-04-25" version="1" fragment="single">MFAPHLIVIGNDLESNDPSAEPIDKAINDEFRNLMDGREKRGQGIFSYEELADASSFISRAQSAPWRRYPDVPDYRALGLCYAAANSAYGVSHPIPTIVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S3</accession>
    <name>A0A2M9P5S3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_25660</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003177">
        <property type="protein sequence ID" value="PJN92887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase_AAA_core" evidence="3">
        <location>
            <begin position="29"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8533" checksum="478918A452F9B97F" modified="2018-04-25" version="1" fragment="single">MKFNGSDDYVATSDLKVAVNAAITLERPLLVKGEPGTGKTELARQIARALDLPLIEWSVKSTTKAHQGLYEYDAVSRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T4</accession>
    <name>A0A2M9P5T4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B</fullName>
            <ecNumber evidence="2">6.3.5.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">gatB</name>
        <name evidence="3" type="ORF">CNY89_18190</name>
        <name evidence="2" type="ORF">CNY89_25705</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01003192">
        <property type="protein sequence ID" value="PJN92880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001420">
        <property type="protein sequence ID" value="PJN93823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006075">
        <property type="entry name" value="Asn/Gln-tRNA_Trfase_suB/E_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02934">
        <property type="entry name" value="GatB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GatB_N" evidence="1">
        <location>
            <begin position="23"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="5822" checksum="B7453E715E29B033" modified="2018-04-25" version="1" fragment="single">MAELAYREPEPKIIAGAKGDWEMVIGLEVHAQVTSASKLFSGASTTFGAEPNTNV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P661</accession>
    <name>A0A2M9P661_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002905">
        <property type="protein sequence ID" value="PJN92998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="25"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10315" checksum="12C2374E1D1803AC" modified="2018-04-25" version="1" fragment="single">MRRFVLRRRVALQAVIERRGYLGLTPRRYESGETSRNGRISKAGEPDDQEAPLRGGHDASNTQPALLNAKVLGSEAREDVRVQEGENRRGSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P675</accession>
    <name>A0A2M9P675_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002809">
        <property type="protein sequence ID" value="PJN93033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="9"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14288" checksum="3A92A4337C27C80A" modified="2018-04-25" version="1" fragment="single">EAADQLRCEIEHVDGTFNAKRRGVLLDWLKSEAGENVCRILTNARCLSEGVDVPALDAIMFLHPRKSQIDVVQSVGRVMRRAEGKKMGYVILPVGVPAGVPPEQALSDNEKYRVVWQILNALRAHDDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P677</accession>
    <name>A0A2M9P677_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1349 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002738">
        <property type="protein sequence ID" value="PJN93056.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009784">
        <property type="entry name" value="DUF1349"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35332">
        <property type="entry name" value="PTHR35332"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07081">
        <property type="entry name" value="DUF1349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93056.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12480" checksum="16A86896939A7CEC" modified="2018-04-25" version="1" fragment="single">MRVDLSQGRWVNEPSDWRLDGDVLLLTTDDRTDFWRETHYGFTRDSGHFLGVPAGESFTATLRVQGEFRSLYDQAGLMIRLDATRWVKTGVEFSDGEAFLSTVVTDGKSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E7</accession>
    <name>A0A2M9P6E7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_23610</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002580">
        <property type="protein sequence ID" value="PJN93112.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017894">
        <property type="entry name" value="HTH_IS21_transposase_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50531">
        <property type="entry name" value="HTH_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <keyword evidence="2" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="HTH IS21-type" evidence="5">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93112.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="10002" checksum="007E514E27C4B0D4" modified="2018-04-25" version="1" fragment="single">MDRQTRTQKIGHSLSIREIARRTGLSRNTIRKYLRLGTVQPEFKVPDRPSKLDPYAEKLAAWLKTDAGKSRKQRRTLKQFHADLVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F6</accession>
    <name>A0A2M9P6F6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002546">
        <property type="protein sequence ID" value="PJN93122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10054" checksum="576CBA255568ABCF" modified="2018-04-25" version="1" fragment="single">MDSGAQSGDAGTRLAQSRLSVLELAKGLGNVAEACRQRGLDRTSFYEWKRRFQTQGFEGLKDLPPIHKSHPQTTPPEVVERIEALALEHPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I4</accession>
    <name>A0A2M9P6I4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20570</name>
        <name evidence="2" type="ORF">CNY89_23330</name>
        <name evidence="1" type="ORF">CNY89_23370</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002521">
        <property type="protein sequence ID" value="PJN93133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002509">
        <property type="protein sequence ID" value="PJN93137.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001853">
        <property type="protein sequence ID" value="PJN93473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93137.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7693" checksum="91FEA758019DADD1" modified="2018-04-25" version="1">MIGEFRDFLNQEYQAYLLAMQDYLNCLGREHESATKEINEIMARWMLWFGDDAKIHSNSPEPARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q1</accession>
    <name>A0A2M9P6Q1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sodium:proton antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002385">
        <property type="protein sequence ID" value="PJN93190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000808">
        <property type="entry name" value="Mrp_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="PTHR42961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01215">
        <property type="entry name" value="MRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15524" checksum="F6414BE09DD8F39B" modified="2018-04-25" version="1" fragment="single">MVKPDEALVWRGPMLMGALQQLMGQVVWGDLDVLVVDLPPGTGDVQLTLAQRYQLAGAVIVSTPQDVALLDARKAVDMFRRTHVPLVGLVENMSAYICPNCGVEAHIFGHGGARAEAARLGVPFLGEVPLDLSIRLSGDAGAPVMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y7</accession>
    <name>A0A2M9P6Y7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002138">
        <property type="protein sequence ID" value="PJN93302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="22"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="16443" checksum="08F2BA43DE97F0F9" modified="2018-04-25" version="1" fragment="single">LVFLGIAWRSLAVLVNNGADGAVFSIALMIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFYENAVSLLKLFLFMALFASWDFQMFFIFILTDFLSTICSRLLSPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Z9</accession>
    <name>A0A2M9P6Z9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21540</name>
        <name evidence="2" type="ORF">CNY89_21815</name>
        <name evidence="1" type="ORF">CNY89_22395</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002276">
        <property type="protein sequence ID" value="PJN93247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002128">
        <property type="protein sequence ID" value="PJN93308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002063">
        <property type="protein sequence ID" value="PJN93344.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93344.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11653" checksum="4868FA13156829B8" modified="2018-04-25" version="1" fragment="single">HPEWIFVRHEDLTADPVASFRDVYGRLGLAFAPDTPERIANLSEQSGGLAAFSLFGSRRRVNRNSKDVAKLFRKRLSEEDIRRISDRAGDVWPDFYTEAEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P765</accession>
    <name>A0A2M9P765_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001976">
        <property type="protein sequence ID" value="PJN93391.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93391.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8532" checksum="6548EEC0131531C2" modified="2018-04-25" version="1">MWTMAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAARRCRRTGGTGSAARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C4</accession>
    <name>A0A2M9P7C4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001941">
        <property type="protein sequence ID" value="PJN93415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="25" mass="3050" checksum="000AD33103EAD3EF" modified="2018-04-25" version="1" fragment="single">ASAEAWINVAQIRLTTRRLARFWYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C5</accession>
    <name>A0A2M9P7C5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001860">
        <property type="protein sequence ID" value="PJN93466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7898" checksum="03BDEE8E8BE88648" modified="2018-04-25" version="1" fragment="single">MWRAYPAANFFLIPTRAWELGVGSICAFLAHRGLRRESQVLSALGLGLILFAIFAFDEKTPFPSLYALVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D0</accession>
    <name>A0A2M9P7D0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Capsular biosynthesis protein CpsI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001937">
        <property type="protein sequence ID" value="PJN93420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="2"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="18995" checksum="8B2FD85D2DC03DC5" modified="2018-04-25" version="1" fragment="single">YHVARALMARGDAVTGFDVVNDYYDPQLKEDRLAELAAADEAGPGSFVFVRADVADRAAVDAAFADHGPFERVIHLAAQAGVRYSLENPVAYVESNVLGFTHILEACRHASVPHLTYASTSSVYGANATMPFSEAQGVDHPLQFYAATKRANELMAHSYSHLYGLPTTGLRFFTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E8</accession>
    <name>A0A2M9P7E8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20635</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001865">
        <property type="protein sequence ID" value="PJN93462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12708" checksum="523F153CB9FF4F4E" modified="2018-04-25" version="1" fragment="single">PNEDSIVRLIGAVLLEQNDEWQLQHRYMQIEGMVELDASAEASPSLICRSRRRMTDGHSSTPRILHQLDGRDPCMPVAHERRAIGHRIPTPPSEIACSSQAILASLRDLASDKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W8</accession>
    <name>A0A2M9P7W8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001609">
        <property type="protein sequence ID" value="PJN93644.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93644.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6263" checksum="B112BD0B4389C90D" modified="2018-04-25" version="1" fragment="single">LVQNVGLATVGALIGAGGFGTFVFQGLGQAAADLILLGALPVVALAFVTSALMDVAIALLPGARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P810</accession>
    <name>A0A2M9P810_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001560">
        <property type="protein sequence ID" value="PJN93684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="7205" checksum="651AB8D952CA65DC" modified="2018-04-25" version="1">MLTLMGGRDMYLRPERVRAIHDRTPGAAGFESYPEGWHWLFRDLQREAVWRDVADFALDPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P846</accession>
    <name>A0A2M9P846_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001564">
        <property type="protein sequence ID" value="PJN93680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007263">
        <property type="entry name" value="DCC1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04134">
        <property type="entry name" value="DCC1-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10883" checksum="3826DAFF353AA8F1" modified="2018-04-25" version="1">MAELRARAPWSWREDPEVPAFEDAGPVAIMDGDCALCAGGARIIARLDREGAFRIGVTGSPTGAALVRHYGLDPQDPETWLYLERGARGSSPASTGRGRSGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P894</accession>
    <name>A0A2M9P894_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase M15</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001495">
        <property type="protein sequence ID" value="PJN93743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7840" checksum="35B69B26925803E5" modified="2018-04-25" version="1" fragment="single">LADSRTMKGGGAAGVATLGAAGVEVAQSVLAETQTAILPLVPYLDTLRWVFIAVALGGIAVTIYARLDDWKRGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J0</accession>
    <name>A0A2M9P8J0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18010</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001400">
        <property type="protein sequence ID" value="PJN93851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="5"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="269"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="269" mass="30248" checksum="6E941458ECCD07C2" modified="2018-04-25" version="1" fragment="single">ARDRVEFTLRPEARFSDGSPVTVEDVIWSMETLAQKALPRYSNAWGKVAKVEAIGERTVRFTFSEPDSELPLLIGLRPVLKKADWEGIDFAQSSLRVPVGSGPYRIGAFEPGRFVSFERNPDWWGRDLPINRGLQNFDTVRYEYFTDAGVLFQAFTAGELSVFREQNPQRWIDEYTFPAVTSGAVLKAEIPHGRPAGMEGFVFNARRPIFQDWRVREALLLAFNFEFVNQTLNGGVFPRRASYFANSRLGMGTGPAEGAARALLEPFAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X8</accession>
    <name>A0A2M9P8X8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001281">
        <property type="protein sequence ID" value="PJN93996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.950.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007421">
        <property type="entry name" value="Schlafen_AlbA_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038461">
        <property type="entry name" value="Schlafen_AlbA_2_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04326">
        <property type="entry name" value="AlbA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AlbA_2" evidence="1">
        <location>
            <begin position="25"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9738" checksum="62CE156B81F936B8" modified="2018-04-25" version="1" fragment="single">MLNGTRFDSIQEQDILQLIDNGVREGLLLEYKRDRYGQSDADKKEFLKDISSFANRSGGHLIIGINEQDGIAASISAIPEDQIDQEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P980</accession>
    <name>A0A2M9P980_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA ligase-associated DEXH box helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16485</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001198">
        <property type="protein sequence ID" value="PJN94108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026360">
        <property type="entry name" value="Xnuc_lig_assoc"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04122">
        <property type="entry name" value="Xnuc_lig_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="250"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="26594" checksum="ADB2304483D25C4F" modified="2018-04-25" version="1" fragment="single">MRPQDLLVPRPEGLYCPPGDFYVDPVRPVPRALITHAHSDHARPGHGAVLATEETLDIMALRIGADFAGARQTAAYGEVIDVGSARVAFHPAGHVLGSAQIAVEAGGLRIVAAGDYKRGADPTCAGFVPVACDVFITEATFGLPVFRHPDPAEEVGKLLASLAQFPERTHVIGVYALGKAQRLIGLLRQAGYAEPIHLHGALRRVCDYYVSRGIDLGPLEDATLARGSKERFAGTIVLAPPSAFAAPWIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P983</accession>
    <name>A0A2M9P983_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001218">
        <property type="protein sequence ID" value="PJN94082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="1">
        <location>
            <begin position="12"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13943" checksum="75F97764F9DFC5CC" modified="2018-04-25" version="1" fragment="single">MDQRANPIRRQRCAIYTRKSSEEGLEQEFNSLHAQREACEAYIASQRSEGWVLVRDQYDDGGISGGTLERPGLKQLLADIEDGLIDVVVVYKIDRLSRSLMDFSKLVEVFDRNGVTFVSVTQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P988</accession>
    <name>A0A2M9P988_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001209">
        <property type="protein sequence ID" value="PJN94093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008407">
        <property type="entry name" value="Brnchd-chn_aa_trnsp_AzlD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05437">
        <property type="entry name" value="AzlD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9643" checksum="E4241E6FAFF82F36" modified="2018-04-25" version="1" fragment="single">MSGTWVVIWGLGIGTFLIRFSFLGMIGDRALPDWAMRMLRYVPVAVLPGLVAPIWGLGIGTFLIRFSFLGMIGDRALPDWAMRMLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B3</accession>
    <name>A0A2M9P9B3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_16315</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001178">
        <property type="protein sequence ID" value="PJN94134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024463">
        <property type="entry name" value="Transposase_TnpC_homeodom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024474">
        <property type="entry name" value="Znf_dom_IS66"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13007">
        <property type="entry name" value="LZ_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13005">
        <property type="entry name" value="zf-IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LZ_Tnp_IS66" evidence="4">
        <location>
            <begin position="2"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="zf-IS66" evidence="3">
        <location>
            <begin position="80"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="2">
        <location>
            <begin position="139"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="351" mass="39238" checksum="CA026CC8F9DB705E" modified="2018-04-25" version="1" fragment="single">MIDDLRREKFGARSEKLSPDQWNLPLEDVEIAQGILEAAQEKADATQQASRPEGERVKRNRKPLPPGLPEIERVIEPASTLCPCGCGEMTRIGEDVARRLDVIPAQFRVLVTRRPKYACRRCAGAVVQAHAPEHVVPGGLPTEALIAQIIVSKFADHTPLYRQAEIFRRQGVDLDRATLGNWVGRACFHLKPVVERMHTHLAGAARLFMDETPLPVLDPGRRTVKKGFFWAMAADDRAHGGPAPPVVIFRYAPSRHGAHAERFLDGCRGRHLQCDAYDGYARLQRLDRPEGGWTLVHCWSHVRRRFVKVLQSTGSPVAETMIRHIAGLYAVEKAVRGHSPDARLAARRQLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D0</accession>
    <name>A0A2M9P9D0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001165">
        <property type="protein sequence ID" value="PJN94154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="19571" checksum="121C4CACA015D9A2" modified="2018-04-25" version="1" fragment="single">MKDDLDAFSTGYGPKERVLIAAQQLAISPSDPGFVATNASDTRTGCCWQDGDAVLAGYSLDAGRSWEKFAALPQPPGTRPQDPWRMSFGAIAVSAGDTRNIVWEPSYDRAPFYTRDQGASWSRVVLEGETLPFTGSHPTIYLQRKNLAADGLLGGVFYLAHSGGGDNAALAGLWRTQDGGAGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H3</accession>
    <name>A0A2M9P9H3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16090</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TrbI/VirB10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001152">
        <property type="protein sequence ID" value="PJN94172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd16429">
        <property type="entry name" value="VirB10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.260">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005498">
        <property type="entry name" value="T4SS_VirB10/TraB/TrbI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042217">
        <property type="entry name" value="T4SS_VirB10/TrbI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03743">
        <property type="entry name" value="TrbI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="6">
        <location>
            <begin position="17"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="22573" checksum="4EE1B549E6ECAABD" modified="2018-04-25" version="1">MRAAALRVADVSPATRVSSRPPPSRATTRSGPSGSADPSRTLVQGTILQGVLETAISTDLPGAVRAVLTEDVVSYDGSTTLLPRGSRLIGTYSASVKIAQRRALIAWTRAVTPAGVSVALGGIGADALGRSGQTGQVDTHFWERFGSAALISVFGMAPQLAVDGQTDADVADALDAIGGDLESSSRSALDAYLRIAPTIDIAQGDRLAIFVNRDLLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N8</accession>
    <name>A0A2M9P9N8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spermidine/putrescine ABC transporter substrate-binding protein PotF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15575</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001088">
        <property type="protein sequence ID" value="PJN94257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019574">
        <property type="entry name" value="Periplasmic_polyamine_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014631312" evidence="4">
        <location>
            <begin position="22"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="361" mass="38730" checksum="1BB31243609B6CA5" modified="2018-04-25" version="1" fragment="single">MRLAQFLGGLALAAAPGLALAQSAQAPSGTLHFYNWSDYIDPQTIPAFEAETGIKVVMDVYDSNETLEAKLLAGNSGYDLVVPTSTYFQRQLGADVYLPLDKSKLPNLANMDPELMASVAQADPDNAHGVIYLWGTNGIAYNPAKVAERMGPDFTLDSWAAVFDPAVASKLADCGITMLDSASEMIPLVLNYLGLPPGSTESADLEKAAETLAAVRPYIRYFNSSQYLSDLANGEICVAVSFSGDAFIAADRAAEAGAGVEVEYAVPKEGAMEWFDVLAIPADAPNPEAAHAFIDYLMRPDVIAPITDYVSYPNANKAATDLVDAEIRENPAIYPTPEVLARLFPEPVPDARGERALTRLW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N9</accession>
    <name>A0A2M9P9N9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001110">
        <property type="protein sequence ID" value="PJN94231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="16486" checksum="10BF25EA6D98804D" modified="2018-04-25" version="1" fragment="single">MRPLSEYLARRIAFEPPALPDLAPLAATVRRVLNRWPDVELPLEQTREAILAAVRDREATNYWKGLPLSAVTSAARVLYLPEFRDRPDLRRLRRFYPEETRASTRQGFLGAMAAVYMDTYIPGAAHSSELGHALGAVRDRLGGRWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P0</accession>
    <name>A0A2M9P9P0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glycine--tRNA ligase beta subunit</fullName>
            <ecNumber evidence="5">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12">Glycyl-tRNA synthetase beta subunit</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_15585</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01001090">
        <property type="protein sequence ID" value="PJN94255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004814">
        <property type="term" value="F:arginine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006420">
        <property type="term" value="P:arginyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008909">
        <property type="entry name" value="DALR_anticod-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015944">
        <property type="entry name" value="Gly-tRNA-synth_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006194">
        <property type="entry name" value="Gly-tRNA-synth_heterodimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30075">
        <property type="entry name" value="PTHR30075"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05746">
        <property type="entry name" value="DALR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02092">
        <property type="entry name" value="tRNA_synt_2f"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50861">
        <property type="entry name" value="AA_TRNA_LIGASE_II_GLYAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 14" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DALR_1" evidence="13">
        <location>
            <begin position="202"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012829"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00031650"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF05746"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="33696" checksum="2C46BBE4D28161F7" modified="2018-04-25" version="1" fragment="single">DAAVAAAAQEHYAPLGPSDAVPTAPVSVAVALADKIDLLSGFWAIDEKPTGSKDPYALRRAALGVLRILLENGISLPLMSIVPGSLEANWRRQKVRSMLDTALEPANALVVTGDDQPAAEIDVSFEVTREVIHDLEAKASDLLAFVLDRLKVYLRDKGVRHDVIDACLAMPGNDDLTLVTRRAEALAAFLETEDGANLLQGFRRANNILTAEEKKDGVEYSLDPDPGFAETEAEKALFAALDRAEAEIAPAVAREDFAAAMTGLAGLRAPIDGFFESTVVNAESPIVRRNRLCLLNRIRVVMTRVAAFAQVEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA12</accession>
    <name>A0A2M9PA12_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">FAD assembly factor SdhE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14975</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SdhE FAD assembly factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001027">
        <property type="protein sequence ID" value="PJN94362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005631">
        <property type="entry name" value="SDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036714">
        <property type="entry name" value="SDH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03937">
        <property type="entry name" value="Sdh5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109910">
        <property type="entry name" value="SSF109910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11630" checksum="CDD6C64B3D3AF24B" modified="2018-04-25" version="1">MTQAQFPITSTPQTASSETPENRLRRLRMRSWRRGMREMDLLLGPFSDVALADLTLEELDVYERLLSENDQDLYLWVTGAQDGPDMFEGILRRIATFHGIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA34</accession>
    <name>A0A2M9PA34_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA gyrase subunit A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14745</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001004">
        <property type="protein sequence ID" value="PJN94400.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003916">
        <property type="term" value="F:DNA topoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="227"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="241"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="268"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94400.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="268" mass="28358" checksum="39AFDCE33F3E8E7E" modified="2018-04-25" version="1" fragment="single">MRNGKIAMKLPEGVRLIGARICSEEDDVMLTTRLGKAIRFPAPDVRVFKGRESTGVRGIRLAEGDEVVSMAIIRHFEASSEERDAYLKMRRAVAGAPEEEVEPEEGEEVADAAFELGQARYVAMSEAEDLLLTVTETGAGKLSSSHDYPVRGRGGQGVAAMDRAMRGGPLVTLMPVEQDAQIMLATDAGQSIRVPVGDISFRSRGAGGVKVFSTAEGERVVSVALVAETGEEEEGTPIAPSSPPGSMTRRSTSEGATSQGGRTAPQAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA40</accession>
    <name>A0A2M9PA40_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001000">
        <property type="protein sequence ID" value="PJN94408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046287">
        <property type="entry name" value="DUF6324"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19849">
        <property type="entry name" value="DUF6324"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7296" checksum="7A711A4CE1B73A6D" modified="2018-04-25" version="1">MGIDSESEVAGNLQIGPTSLGMVRIYVETTQGGLPFDFEPEEAEEIAEELRVAAERARAMQSKRKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA51</accession>
    <name>A0A2M9PA51_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF1775 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000991">
        <property type="protein sequence ID" value="PJN94420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08545">
        <property type="entry name" value="YcnI_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2230">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012533">
        <property type="entry name" value="YcnI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038507">
        <property type="entry name" value="YcnI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07987">
        <property type="entry name" value="DUF1775"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014760839" description="DUF1775 domain-containing protein" evidence="1">
        <location>
            <begin position="21"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1775" evidence="2">
        <location>
            <begin position="19"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="171" mass="18284" checksum="8962B963C1501A5B" modified="2018-04-25" version="1">MKLVLTLIAAALAGPAFAHATFEQTEFAQNSTAKFTTRIGHGCEGEATLRVRVQIPEGVIAVKPMPKAGWTLETVSGPYGRSYELWGATVTEGVKEIVWTGELPDAFYDEFVFRGRITDSLPAGETLYVPVVQECANGAERWIEIPAAGQDPDALEFPAPGVKIVPAAGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD4</accession>
    <name>A0A2M9PAD4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14105</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000937">
        <property type="protein sequence ID" value="PJN94505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="50"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9489" checksum="2611A6CCF64B34CF" modified="2018-04-25" version="1" fragment="single">VRPALMVAVIFRMLDALRIFDLIYVLTPNSKATKTMSIISRENLIEFDKFAYGSAQSTLLFAIIAIFVSAYIWLGKVDLSGDGEK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF2</accession>
    <name>A0A2M9PAF2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000927">
        <property type="protein sequence ID" value="PJN94525.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="36"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94525.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="33199" checksum="7CD800B7094396DE" modified="2018-04-25" version="1">MRALPASIDATQTLLGSAGYVSGRGLSTVVFLALKLGRPLFLEGEAGVGKTEIAKALATALGRQLIRLQCYEGLDSASAVYEWNFPAQMVAIRTAEAVGGADRHALTRELFSEEFLIRRPLLEAMSPQEGGAPVLLIDEIDRTDEPFEAFLLEALSDFQVTIPELGAIRAETPPVVILTSNRTREVHDALKRRCLYHWVEYPSYQRELSILRTRAPEAAERLSREVVAFVQRLRAEDLFKKPGVAETIDWAKCLVALDAIALSPQMIADTLGALLKYQDDILRMQGTAAAKLLDEARAGLAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG1</accession>
    <name>A0A2M9PAG1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Pyruvate carboxyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000932">
        <property type="protein sequence ID" value="PJN94514.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046912">
        <property type="term" value="F:acyltransferase activity, acyl groups converted into alkyl on transfer"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044249">
        <property type="term" value="P:cellular biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002034">
        <property type="entry name" value="AIPM/Hcit_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00816">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="1">
        <location>
            <begin position="121"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94514.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="435" mass="47616" checksum="7DDB47FAF4079E08" modified="2018-04-25" version="1" fragment="single">HVGDGGLEGRGEAGGGRLQHKDQEIDLPDFGHEAVSAIARQTRDAVICGLARANFKDIDRCWEAVRHAKRPRIHTFIGTSPLHRAIPNLDQDQMAERIHETVTHARNLCDNVQWSPMDATRTEHDYLCRTVEIAIKAGATTINIPDTVGYTAPRESADLIRMLLERVPGADEVVFATHCHNDLGMATANALAAVEAGARQIECTINGLGERAGNTALEEVVMALKVRNDIMPYRTGVDTTKIMTISRKVATVSGFPVQFNKAIVGKNAFAHESGIHQDGMLKNAETFEIMRPEDVGLNATSLVMGKHSGRAALRAKLVELGFQVGDNQLSDVFVRFKALADRKKEVYDDDLVALMQDQGTNAANDRIQVRRLRVVCGTEAPQTAELTLSIDGVEHVVERRATGRILERGADHGVAIDLPHQVEQAALHRLVLVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG2</accession>
    <name>A0A2M9PAG2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1345 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000923">
        <property type="protein sequence ID" value="PJN94533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009781">
        <property type="entry name" value="DUF1345"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07077">
        <property type="entry name" value="DUF1345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="19492" checksum="D18A757024A80B75" modified="2018-04-25" version="1" fragment="single">LDPAAALVVGFDLAAGGFILSCLPLWRRDRIPDMQARAARDDGGRTLLTLVALLSLGVVLVALVQMVGTGKQSSLVEFAMVAGTLVIAWLFINLLYAFHYANIYHRSAGNRATGGLDFPGQDPPLYADFVYFSFVIGMTCQVSDVEISSTELRRVATGHGLIAFFFNLGVLALTVNVLAGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG5</accession>
    <name>A0A2M9PAG5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13980</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000926">
        <property type="protein sequence ID" value="PJN94527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007300">
        <property type="entry name" value="CidB/LrgB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30249">
        <property type="entry name" value="PTHR30249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04172">
        <property type="entry name" value="LrgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="158"/>
            <end position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="18080" checksum="7C6D9B1C27A1175B" modified="2018-04-25" version="1">MGDRRVAAVDVPDALAHEAGVGQHQIRPVGGPAVPHAQVVQHGAVGEPLRAEADPAHLEVGELLVPSVADLGAPTPIVASLATKSTTAPIAMALSETLGGIPALAAVLVVITGIFGAVVVTPLMNALRVTDFAARGFAVGVASHGIGTARAFQVSEEAGVFAGVAMGLNGALTALVFLLIAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ2</accession>
    <name>A0A2M9PAJ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Capsular biosynthesis protein CpsI</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13745</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NAD(P)-dependent epimerase/dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000903">
        <property type="protein sequence ID" value="PJN94570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001509">
        <property type="entry name" value="Epimerase_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01370">
        <property type="entry name" value="Epimerase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Epimerase" evidence="2">
        <location>
            <begin position="3"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="4960" checksum="1B0F3204500DB232" modified="2018-04-25" version="1" fragment="single">MRVLVTGAAGFIGYHVARALMARGDAVTGFDVVNDYYDPQLKEDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ3</accession>
    <name>A0A2M9PAJ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Outer membrane protein assembly factor BamA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13770</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000905">
        <property type="protein sequence ID" value="PJN94565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000184">
        <property type="entry name" value="Bac_surfAg_D15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039910">
        <property type="entry name" value="D15-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12815">
        <property type="entry name" value="PTHR12815"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01103">
        <property type="entry name" value="Omp85"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1134">Transmembrane beta strand</keyword>
    <feature type="domain" description="Omp85" evidence="4">
        <location>
            <begin position="45"/>
            <end position="368"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01103"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="368" mass="40042" checksum="EDD43546F02EEC36" modified="2018-04-25" version="1" fragment="single">EQGAAPSRAIVGVAVTEKPTGSLNLGGSFSSSEGAALQISIAERNFLGRGQTVNLAFTGSSQYSNVDFTFLEPAMFDRDLLAGVQVFYRDRNYNETAYKTRNIGFVPRIGFPVSENGRLTLRYTIGQDDIFDVKDDTSLIIRDEQGKQIVSALGATYVYDRRNSPVDPTAGFILTLSQELAGLGGDARYSKTSGVARAYTSFFDEDLLLSATFEGGALFTDGQSRVTDRYITGGDSFRGFARNGVGPRDFCRVGDCVDPSQADVKVDDPLGGQYLSVLRLDASFPLGPLEEYGIFGGVFSDIGSLWGLDNVNGSMGKVDADFYLRATAGVSLFVETPFAPLRFNLSRALRKEDHDETENFRFSVATRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX0</accession>
    <name>A0A2M9PAX0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">OsmC family peroxiredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000830">
        <property type="protein sequence ID" value="PJN94686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003718">
        <property type="entry name" value="OsmC/Ohr_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036102">
        <property type="entry name" value="OsmC/Ohrsf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019904">
        <property type="entry name" value="Peroxiredoxin_OsmC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02566">
        <property type="entry name" value="OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82784">
        <property type="entry name" value="SSF82784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03562">
        <property type="entry name" value="osmo_induc_OsmC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="14329" checksum="71458DDD2556F81F" modified="2018-04-25" version="1">MKRSGSAVWQGGLKDGAGTVSTESGVLDAVPYSFSKRFGDEKGTNPEELLGAAHAACFTMALSNVLGEAGLTADELSTTATVTVQPGDGGFVIPTVHLKLTAKIPGASEEAFQDAAAKAKAGCPVSKLFNAEISLDAELVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX9</accession>
    <name>A0A2M9PAX9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cytochrome C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_12985</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000825">
        <property type="protein sequence ID" value="PJN94694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008168">
        <property type="entry name" value="Cyt_C_IC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00605">
        <property type="entry name" value="CYTCHROMECIC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 7" id="KW-0349">Heme</keyword>
    <keyword evidence="6 7" id="KW-0408">Iron</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Cytochrome c" evidence="8">
        <location>
            <begin position="30"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15453" checksum="AB828BBDEF741894" modified="2018-04-25" version="1">MGLFAGVLILAIFAGLQYTRTASTAAASEEDISQGRQVYVDQCAACHGADLVGQPDWRSPLPSGRLPAPPHDASGHTWHHPDDVLFRIVKEGTAAIVGGGYESDMPGFGDVLSDAEIRTVLAYIKSTWPERERSYQESVSQPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB07</accession>
    <name>A0A2M9PB07_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000816">
        <property type="protein sequence ID" value="PJN94709.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94709.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7200" checksum="EC70755B55540C79" modified="2018-04-25" version="1">MASVMPIESKLNRRVAGEDPLDEACFLAELRLKVEGARTAAEEALARALPEWTDRLNTVCARMGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB94</accession>
    <name>A0A2M9PB94_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Prim-Pol domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000757">
        <property type="protein sequence ID" value="PJN94816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015330">
        <property type="entry name" value="DNA_primase/pol_bifunc_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09250">
        <property type="entry name" value="Prim-Pol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prim-Pol" evidence="1">
        <location>
            <begin position="2"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16677" checksum="6149D91D7720966F" modified="2018-04-25" version="1" fragment="single">MGPTSGLVEIDVDAAGDAWLAAAVDRFGDSPIAIQTASGKYKLWFRHNGEGRHIRPLTGLPIDVLGGGFTIAPPSIRSDGEAYRFLRGGLDDIPRLPVIREGALDFGRQHATEKGFDRIPEAVRSGERNDTLWRWTMAQARYCDDVDQLVDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD3</accession>
    <name>A0A2M9PBD3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH_21 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000738">
        <property type="protein sequence ID" value="PJN94840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_21" evidence="2">
        <location>
            <begin position="58"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14133" checksum="B851531FEC4D1049" modified="2018-04-25" version="1">MRERLGNRRSASAKLLSPARRRCIDHVRTKLDVSERLACRVLGQHRSTQRKTPKGRADEAALTADIVALATQYGRSGHRRIAAMLQAAGWAVNVKRVARRDLVRHWSEDNGRAAPGRAQGSGEATEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD9</accession>
    <name>A0A2M9PBD9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SUF system Fe-S cluster assembly protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000731">
        <property type="protein sequence ID" value="PJN94854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034904">
        <property type="entry name" value="FSCA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002744">
        <property type="entry name" value="MIP18-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014291">
        <property type="entry name" value="SUF_FeS_clus_asmbl-assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01883">
        <property type="entry name" value="FeS_assembly_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117916">
        <property type="entry name" value="SSF117916"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02945">
        <property type="entry name" value="SUF_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FeS_assembly_P" evidence="1">
        <location>
            <begin position="27"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13344" checksum="47759D581C757939" modified="2018-04-25" version="1">MNIETDVPMEGTPLIRPSTTDHPLYDSVVEACRTVYDPEIPVNIYDLGLVYTIEINEAGDVRIDMTLTAPGCPVAGEMPGWVADAVLAVPGVRQVDTNMVWDPQWGMDMMSDEARLELGFM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE3</accession>
    <name>A0A2M9PBE3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000737">
        <property type="protein sequence ID" value="PJN94842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017030">
        <property type="entry name" value="Vir_effector_SfrC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10139">
        <property type="entry name" value="Virul_Fac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="486"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="521"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="521" mass="58136" checksum="1A8CD70EE9E576E5" modified="2018-04-25" version="1" fragment="single">HVDALKDLDRTGTVPQLGVLSGTPGAGLVHLPVGVVSALTAELFVTLEEAPWPFLTHTDLLDFPGARSRQRSTVWEFLRKPEEQDSFPRSQCFRRGKVAVLFDNYAADLDLNAMLLCKDHGNQEVTELSDLVLDWIRRTHGETPERRQGKPVAMFFCMTKCDIMLGRTKGADDPVQKRFSNNINAFRGGWIEEWTPGQPFRNFFMLRNPVVENRGFFTYATGDRVGEETGYNPEFEEYLDSTLRPMFLGEALVRKHVEDPEAKLKALMKRNDGGSTLLAEKLAPICNPDLKYDQIAPRAERVATALLQALGDFYESGDIETRVAERVGRLRLLTAALKRRPAEIGPFIAAFQVEEPLIEAAYLDHRRNAGQAVETETTVFDDLFGDEPEEPAAARGGFGPAVLAWWANHLTERATASPWALRLGLEEEVLRAFVTEIVIGADRIEAARMLEGRLDEYTLNSLRLDAAARRVSIFGTLTVNDLVSYPGGRGQPANAGRFNRAPAPGPKETCDLPENPRDMER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBM9</accession>
    <name>A0A2M9PBM9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Tyr recombinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11455</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000685">
        <property type="protein sequence ID" value="PJN94940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="2">
        <location>
            <begin position="1"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="12989" checksum="063FD25DD4A53A07" modified="2018-04-25" version="1">MRHAFATHLLANGAYLFPAGGAKGHLGRERFFVMVKELAALAGLKPAAVSPHALRHAFATHLLANGADLRVIQTLLGHASISTTEIYTHVLDERLKALVLERHPLAEPEPRERDSADDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT5</accession>
    <name>A0A2M9PBT5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000659">
        <property type="protein sequence ID" value="PJN94991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.690">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045372">
        <property type="entry name" value="YidB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027405">
        <property type="entry name" value="YidB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20159">
        <property type="entry name" value="YidB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140804">
        <property type="entry name" value="SSF140804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="30"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17266" checksum="E6B25DADA55E29EB" modified="2018-04-25" version="1">MSKGMPSLMALLGLVAVAGYQNRDKLRDMIGDARGSAPTDPNPGPEGQARTGGGLLDEIGQMFGSGNSGRNLSEGLGELVTRFRNNGLGASADSWVSRDANVEVQPEQVETAIGRDTIEELSRKTGLSPAEIVKRLSVSIPAAVDRFTPEGRLPSDDEAQRFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW6</accession>
    <name>A0A2M9PBW6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Iron ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000652">
        <property type="protein sequence ID" value="PJN95004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023374">
        <property type="entry name" value="AttH-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010791">
        <property type="entry name" value="AttH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07143">
        <property type="entry name" value="CrtC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CrtC" evidence="1">
        <location>
            <begin position="2"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12215" checksum="168535C4496550F4" modified="2018-04-25" version="1" fragment="single">GTGQAGVTLAPFAAWLDDWTLATLGAPADPFDAVTVSASGPGFSYTLAGTAEGPLMRQGEDGYSLKSDAGQASYYYSQPFLRVEGQLTLDGAAIPVTGRDWCRRRGRAARARRER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX6</accession>
    <name>A0A2M9PBX6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alanine racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000635">
        <property type="protein sequence ID" value="PJN95041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4381" checksum="D1638B31DEC8D070" modified="2018-04-25" version="1" fragment="single">DVRAILGRRQGVADLAARAGTIGRGSLTSLGPRCERVYLGTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC28</accession>
    <name>A0A2M9PC28_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000603">
        <property type="protein sequence ID" value="PJN95107.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95107.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8227" checksum="77EE623EEFBFC2AB" modified="2018-04-25" version="1">MVALSDARDEAREQIEDMEPTTMAGIAAVAHVAWATDAMPWAVGSEDYLREAERPFCKMLAAIWRCASGETGLPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA8</accession>
    <name>A0A2M9PCA8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Secretion protein HlyD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000584">
        <property type="protein sequence ID" value="PJN95142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="2">
        <location>
            <begin position="82"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="114"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="409" mass="44376" checksum="9094C39D078377FD" modified="2018-04-25" version="1">MLELLLCSSLTILPDFLYRRFVQGKRVGREITLFSVWYELRWGITLCVILTLSLITTIFYFHPSTTSAVSYFRTISILPEGYGRVTEVYVDYRDEVKAGDPLFRLDDTEQKAAIETATRRIAEVEAQMVTAKSTLAEAEGRILQARGLLQQAVDEYDTRAELMRRNSSAISQREVDRAQVTVDTQSGQLDAALAARAAVQSQIDFELPASKASAEAELAEAEVALTKRVVYAGVDGTVEQFTLRPGDIVNQMMRPAGILIPATAGRVGLQAGFGQIEAQVLKPGMIGEVTCVAMPFTVTPVVVTQVQSVIASGQIRPTDQLMDAQSARGGSLLAYMEPLYPGGLDRLPPGANCIANAYTSNYEALHDPATGAGQAFVLHAIDATGLVHAMILRMQALVLPVRTLVLGGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE0</accession>
    <name>A0A2M9PCE0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000553">
        <property type="protein sequence ID" value="PJN95211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="1">
        <location>
            <begin position="3"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11493" checksum="0FC33E32F485E0F8" modified="2018-04-25" version="1" fragment="single">MEITLRQLKYLIALADEGHFSRAAQAANVSQPALSVQIREMEDRLGVQLVERSPRRVDFTPAGREVLWRARRIMDEISELQQAARWKRGLGGQLRLGVIPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI1</accession>
    <name>A0A2M9PCI1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA helicase</fullName>
            <ecNumber evidence="2">3.6.4.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_09745</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="3.6.4.12"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.4.12" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000545">
        <property type="protein sequence ID" value="PJN95222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003678">
        <property type="term" value="F:DNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014017">
        <property type="entry name" value="DNA_helicase_UvrD-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000212">
        <property type="entry name" value="DNA_helicase_UvrD/REP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014016">
        <property type="entry name" value="UvrD-like_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11070">
        <property type="entry name" value="PTHR11070"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00580">
        <property type="entry name" value="UvrD-helicase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13361">
        <property type="entry name" value="UvrD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UvrD-like helicase ATP-binding" evidence="6">
        <location>
            <begin position="85"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="domain" description="UvrD-like helicase C-terminal" evidence="7">
        <location>
            <begin position="261"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="168"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001665"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00580"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF13361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="345" mass="38293" checksum="AF3686DBC26F95A3" modified="2018-04-25" version="1">MARAAQGHTLDAVFLEEEWRLVIDAWGVTDAAAYRDLPRLGRRQRMPAARRDSLWQLFAAVRADLAARGLMTRAAMFHRLADHFATVPAPWDYVVVDEAQDISVAELRFLSALAGAKPNGLFFAGDIGQRIFRAAFPWKALGVDIQGRSRSLKVNYRTSRQIRSRSDRLLPSRLTESDGGEEDRRGVVSVFEGPPPEIRRFPDAAAESDALGLWLVHLQKEGFAADEIGVLVRTIAQYPRARDAIDFAGLDIAELVGSMGQARGKVSLATMHQAKGMEFRAVAVLACDARIIPNDERLLLARDEASLDEIFATERHLLYVAATRARERLWLSGAGQVSEFLEDLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI5</accession>
    <name>A0A2M9PCI5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000527">
        <property type="protein sequence ID" value="PJN95257.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014767399" evidence="1">
        <location>
            <begin position="21"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95257.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9336" checksum="002D95148693125D" modified="2018-04-25" version="1">MRAAAVLALACAMNLGPNLAMRLAFRPAGRRTAAAYGLMFGNRTIALYVAVMPHDADLTLFVALYQAPILLGPLLLRPIRYDHTPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK2</accession>
    <name>A0A2M9PCK2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09445</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000521">
        <property type="protein sequence ID" value="PJN95271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="15"/>
            <end position="137"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="3">
        <location>
            <begin position="151"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="25245" checksum="D414C38F36FEFF1F" modified="2018-04-25" version="1">MAEEEPFDWTARFAGLSRLRADVKDTLLQESRVAAVAQGTVIFGPGKAPENLLLLLDGSVRVHQTSENGREIVLYRVTAGESCVLTTACLLAYEDYSAEGVAETDLRAVLVPRRAFDELISRSPEFRRFVFTAYARRITDLFQVIEEIVFRRVDLRLAQKLLQRADAQGALQETHQNLALELGSAREVISRQLQEFQRRGWLELGRGTIRITAPAALRRFGEGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN0</accession>
    <name>A0A2M9PCN0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000523">
        <property type="protein sequence ID" value="PJN95264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="23"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="60"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9572" checksum="EEA2FD98328E13AE" modified="2018-04-25" version="1" fragment="single">VDSMQDIRGEMLSTMKRIGMKVDKHHHEVASPPRASARAMSMSGAKRVMDPCDAPPLRLASHPRPERRRGVEKVSRPSTWLGRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU2</accession>
    <name>A0A2M9PCU2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar biosynthesis repressor FlbT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000497">
        <property type="protein sequence ID" value="PJN95334.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048027">
        <property type="term" value="F:mRNA 5'-UTR binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006402">
        <property type="term" value="P:mRNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1902209">
        <property type="term" value="P:negative regulation of bacterial-type flagellum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009967">
        <property type="entry name" value="Flagellum_FlbT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07378">
        <property type="entry name" value="FlbT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95334.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8064" checksum="B7539B52CAEBB251" modified="2018-04-25" version="1" fragment="single">QLALAGEADPEEARRQILRGVEQLSQVFTDPESRAHLTTATESAEARRFYQAMKALRNLLPRETRLLSVQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD26</accession>
    <name>A0A2M9PD26_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH luxR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08430</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000447">
        <property type="protein sequence ID" value="PJN95447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005143">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036693">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03472">
        <property type="entry name" value="Autoind_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75516">
        <property type="entry name" value="SSF75516"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00622">
        <property type="entry name" value="HTH_LUXR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="182"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="253" mass="27807" checksum="2A3E5C4B5878793C" modified="2018-04-25" version="1">MNHAASRRTHRGALMDPLAFEAEIYRMCRVEDVWALMVAFARTQGARRLGYHHVPPPGAPDSGLHRVENDGFAEALLAQYLAARSTGTAALATTAQNSVHPVYLDEIERRSDLSPRERSNLAAYRAAGVEHGLAFSVYGPNARNALFAVELEERRLPPDRLSALRWGGQVMHLRYSELLIESLGDLPSLSEREAEILAWVARGKSNASIGEILGISAHTVDAHLRRIYLKLGVVDRISAALRGLGFGLIRIDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD91</accession>
    <name>A0A2M9PD91_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Mannitol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000421">
        <property type="protein sequence ID" value="PJN95511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019594">
        <property type="term" value="P:mannitol metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000669">
        <property type="entry name" value="Mannitol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013118">
        <property type="entry name" value="Mannitol_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023027">
        <property type="entry name" value="Mannitol_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013131">
        <property type="entry name" value="Mannitol_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01232">
        <property type="entry name" value="Mannitol_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08125">
        <property type="entry name" value="Mannitol_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00084">
        <property type="entry name" value="MTLDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00974">
        <property type="entry name" value="MANNITOL_DHGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mannitol_dh" evidence="1">
        <location>
            <begin position="30"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Mannitol_dh_C" evidence="2">
        <location>
            <begin position="220"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="518"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01232"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="518" mass="56191" checksum="88852318C2FFE1A1" modified="2018-04-25" version="1" fragment="single">MPVPLSLATLGDLPEGVARPTYARGDLSAGIVHFGVGNFHRAHLQVYMDRLMNQGRDLDWAVVGAGVTPYDAAMRDALAPQDWLTTVVEQEAGSSSARVIAPMTDFLPPMDGAAIEAALADPAIRIVSLTVTEGGYFIDPATGAFDPTHPAIAADAANPQAPKTVFGLILAGLKARREVGVAPFTVMSCDNVPHNGVVAKNAVAGLAEAQDPALAAWVRENVAFPNAMVDRIAPATSDRERKICAEEFGIADAWPVFCEDYIQWVIEDNFPSGRPAWEEVGAQFVPDVTPFEHMKIRILNGGHAIIAYPSGLMDVHFVHEGMEHPLVRAFLDKIEREEIISILPPVPDTDLADYFALIERRFSNPKIGDTIRRLALDGSNRQPKFIVPSIADRLAKDLPVEGLALESALWCRYCAGVTDSGKPIAPNDPSWDRLNTVALAAKSDPMAWLSMRDIYGDTADAPAFREAFARWLHQLDREGLTFSGEAAVSRFLSISAVEWLEVADCSSRAACRCQNFAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA8</accession>
    <name>A0A2M9PDA8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000413">
        <property type="protein sequence ID" value="PJN95530.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942216" evidence="1">
        <location>
            <begin position="23"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95530.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="30013" checksum="F79240417068DBCD" modified="2018-04-25" version="1">MRLGFPVGLAFVLALSAAPALGQGWEGDEGDDGAWFGASARPAGETYGARSFWLYCGGRSPRGRPLTGEHNHAIQTAPGAFLMQVSIDATGGDTMDDESRGDIRFVVDGSRVDVPPLTPNALDETFDVELPWSHPLIAALKSGRELVIASDAAPPRKVGLAGSSKTLTAAQAFCGRVNGVSRPASAPVAPAPIPGDPDAARTRLAIALANELDAECRSLGGTGVVFEPEALTLHPGGAVQANFHRIKCTNAPNAMNVLGVGNCGVSACAQRVYEPGPDGYEMTREYYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM7</accession>
    <name>A0A2M9PDM7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000360">
        <property type="protein sequence ID" value="PJN95650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="5612" checksum="D668747DB3D2CB98" modified="2018-04-25" version="1" fragment="single">MLALALVLEGVDRKTAAETCGMDRQTLRDWVHRYNAAGLAGAGEPAGRSAAAAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR2</accession>
    <name>A0A2M9PDR2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07135</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000355">
        <property type="protein sequence ID" value="PJN95663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="15810" checksum="CD2589BB55B75E26" modified="2018-04-25" version="1">MTVLPFPKRAAVAPAVAPAVRSAAVRVLAADGSVTPAFFASLTARMDESLGWRGEGDVARSVPLVLAHLVTVAEERLTGRTFAPGEFLDYANAALLTLAPTPAALHGAEAEYHAMNAAEQGLYVLRFIGGFVRNFTEYRGAAPTCEHGAAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS7</accession>
    <name>A0A2M9PDS7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Copper oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07025</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000346">
        <property type="protein sequence ID" value="PJN95686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13896">
        <property type="entry name" value="CuRO_3_CopA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002355">
        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034279">
        <property type="entry name" value="CuRO_3_CopA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="3">
        <location>
            <begin position="17"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14623" checksum="5642CEE195A788DE" modified="2018-04-25" version="1" fragment="single">LRAARPLAQRRPDRERTLMLEGGMQPYRWTIDGRTWGDHQPIEARSGERVELTFHNMSMMAHPMHLHGHVFQVVAIDGKPFDGALRDTVHVPPMAAVTIAFDAGEPASWMLHCHHMPHLATGMMTEVAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW2</accession>
    <name>A0A2M9PDW2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06965</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000342">
        <property type="protein sequence ID" value="PJN95698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019062">
        <property type="term" value="P:virion attachment to host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005068">
        <property type="entry name" value="Phage_lambda_Stf-r2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03406">
        <property type="entry name" value="Phage_fiber_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="238"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="294"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="32448" checksum="C25FBCD66CFFF4F1" modified="2018-04-25" version="1" fragment="single">MATLNETDEWVAGVYQIEETDPVLGGAPNEATKAGLDNIPHLHLAKRTTWLKTRVDALIGLVVQASVTVAGIVRLSASVNSDSTSTAATSSAVKAANDNANGRALASRTVSAGGLATGGGDLTANRTITVPVATQAEAQAGTENAKAMTPLRVMQLLAAQIGMGSASSAGLLRISNSLFNDDPDVAVSAAAAMRANANANSRALATQRILAGGLATGGGDLSADRTITVPVATQAEAQAATDNTKAMTPPAGHAAARRPDRRSDRPRQHLGRRHRAIERLGEQHLHQHCGHALGREGGERQRQQPGAGEPHHLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW8</accession>
    <name>A0A2M9PDW8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06795</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000329">
        <property type="protein sequence ID" value="PJN95726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="24"/>
            <end position="258"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="30171" checksum="4ABCEE54D5FBF405" modified="2018-04-25" version="1">MPTITTRDGTEIYFKDWGPRDAQPIVFHHGWPLSSDDWDAQILFFLSKGYRVVAHDRRGHGRSAQVSEGHDMDHYAADAAAVMEHLDLRGAVHIGHSTGGGEVARYVAQYGEPQGRVAKAVLVSAVPPIMVKTDAYPGGLPIEVFDGLRASLAANRAQFFIDLPAGPFYGFNRAGAKVSQGAIDNWWRQGMTGSAKAHYEGIKAFSETDQTADLKAISVPVLVLHGDDDQIVPIDNSGRLSVDLVQNGTLKVYPGFPHGMLTTHAEVINPDLLAFVES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ2</accession>
    <name>A0A2M9PDZ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">AI-2E family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000323">
        <property type="protein sequence ID" value="PJN95742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="160"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="213"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="240"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="277"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="315"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="357" mass="38297" checksum="793FFDFDF80D3D81" modified="2018-04-25" version="1">MDDKLQTKAFLLLLGLVTIAFFWILLPFYGAVLWAVILAIVFRPLQRALLRAFGGRANLAAAISTITCIFIAIVPMTFLVGALVNEGAKLVQLIQQGQFSPPDTLADLYAHLPGWAQRAVNRLGLNDIDLDALRERLASALAQASQFLAGQALSVGQNTLRFAASIGIMLYVLFFLFRDGLQIGRNIRAALPFDPRISQALLIKFAAVVRATVRGNVIIAVIQGAIGGVAFWLLGIPGALLWGVLMMFLSMLPAVGAALIWAPVAGYFFVTGDPQRALILTGIGIFVIGMIDNILRPPLVGKETRLPDYVVLVSTLGGISVVGINGFVIGPMIAALFLASWTLFRDGEVARDSSVPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE64</accession>
    <name>A0A2M9PE64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Cold-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06345</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000299">
        <property type="protein sequence ID" value="PJN95804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012156">
        <property type="entry name" value="Cold_shock_CspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019844">
        <property type="entry name" value="CSD_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002599">
        <property type="entry name" value="Cold_shock_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00352">
        <property type="entry name" value="CSD_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="3">
        <location>
            <begin position="1"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7359" checksum="35C7593876872277" modified="2018-04-25" version="1">MANGTVKWYNATKGFGFIQPERGSKDVFVHASALERAGITRLDDGQKVTFDIESGRDGRESASNLALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM8</accession>
    <name>A0A2M9PEM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Na+/H+ antiporter subunit C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05290</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000239">
        <property type="protein sequence ID" value="PJN95978.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039428">
        <property type="entry name" value="NUOK/Mnh_C1-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00420">
        <property type="entry name" value="Oxidored_q2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="26"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95978.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12031" checksum="D64B2E1C023C3A2C" modified="2018-04-25" version="1">MELTLALAIGVLTGSGIWLVLRPRTFQVIVGLCLLGYGVNLFIFSMGRLRVGAPAILDKGVPKDVSVLADPVPQALVLTAIVIGFATTALFLVVLLALRGFTGTDHVDGKESDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN2</accession>
    <name>A0A2M9PEN2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Membrane protein insertase YidC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="12 13">Foldase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11 13">Membrane integrase YidC</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Membrane protein YidC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">yidC</name>
        <name evidence="15" type="ORF">CNY89_05085</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Interacts with the Sec translocase complex via SecD. Specifically interacts with transmembrane segments of nascent integral membrane proteins during membrane integration.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
            <topology evidence="13">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the OXA1/ALB3/YidC family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000226">
        <property type="protein sequence ID" value="PJN96011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032977">
        <property type="term" value="F:membrane insertase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.98.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01810">
        <property type="entry name" value="YidC_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019998">
        <property type="entry name" value="Membr_insert_YidC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028055">
        <property type="entry name" value="Membr_insert_YidC/Oxa1_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028053">
        <property type="entry name" value="Membr_insert_YidC_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001708">
        <property type="entry name" value="YidC/ALB3/OXA1/COX18"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038210">
        <property type="entry name" value="YidC_periplasmic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038221">
        <property type="entry name" value="YidC_periplasmic_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12428">
        <property type="entry name" value="PTHR12428"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02096">
        <property type="entry name" value="60KD_IMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14849">
        <property type="entry name" value="YidC_periplas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00701">
        <property type="entry name" value="60KDINNERMP"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01900">
        <property type="entry name" value="YIDCPROTEIN"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03593">
        <property type="entry name" value="yidC_nterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03592">
        <property type="entry name" value="yidC_oxa1_cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 13" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 13" id="KW-0653">Protein transport</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 13" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 13" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="363"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="500"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="533"/>
            <end position="560"/>
        </location>
    </feature>
    <feature type="domain" description="YidC_periplas" evidence="14">
        <location>
            <begin position="71"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010527"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015325"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00033342"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF14849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="596" mass="65842" checksum="59A56A99F3A242AB" modified="2018-04-25" version="1">MDNQNKNLILATALSFLVIVGWFLLFPPPEPPATPEPAVQTDATGAVVPAPGALPVETVVAREEVLTRSPRVPIKTERLGGSISLTGGRIDDLDLLNYFKTIEPGSPTVTLLNPAGSPGAYYALYGWSPGPGVTADAVPGPSTPWEIESGETLTETTPVTLVWDNGQGLIFRRTFSVDPNFMFTVTQAVENRTGAPVELAPYGIIARHGVPTDLRNFYILHEGVIGMANGQLIETKWKKIPDMPFDAAEQANVEKIDVATDGWIGFTDHYWMSTLVGQPGQPFTAVTKFSPASDTFQTDMRLPPMTVAPGQTAEATTWLFAGAKEWATIRDYQNEKGIDRFVDAIDWGWFFFLTKPIFRALHLMHAVIGNMGLAIIGLTILIKAVLFPLAYKSYVSMSKMKALQPQMEKLKEQAGDDRMKLQTEIMALYKREKVNPAAGCLPILLQIPIFFSLYKVIFVTLELRHAPFFGWIKDLSAPDPTSVLNFFGLLPWATPEHGSIFFILSIGALPILLGVSMWLQMKLNPAPADATQAMIFAWMPWIFMFMMGGFASGLVVYWIANNLITFTQQYIIMRSQGVPPDVFGNITKTFKRKKAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES2</accession>
    <name>A0A2M9PES2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_04975</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Membrane</location>
            <topology evidence="2 6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000219">
        <property type="protein sequence ID" value="PJN96031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001750">
        <property type="entry name" value="ND/Mrp_mem"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001516">
        <property type="entry name" value="Proton_antipo_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00361">
        <property type="entry name" value="Proton_antipo_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00662">
        <property type="entry name" value="Proton_antipo_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="131"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="173"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="216"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="280"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="309"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="333"/>
            <end position="357"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="378"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="424"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="470"/>
            <end position="498"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="518"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="583"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_N" evidence="9">
        <location>
            <begin position="73"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="Proton_antipo_M" evidence="8">
        <location>
            <begin position="137"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="746"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002378"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00361"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00662"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="746" mass="80789" checksum="6D36D91D3F4716C7" modified="2018-04-25" version="1" fragment="single">MSGESTGVIQGNLLLILLVLPFLGSVVAASLPPNGRHAEAWLAGAVAAACAIITFALYPEVAQGGVIRRDTDWLPSFGLSFTLRLDGFAWLFLTLIFTIGLLVVLYAAYYLSPKDPAPKFFSTLLAFMGAMTGVVISGNIIVLVVFWELTSVFSFLLIGYWTHSPAARDGARMALTVTAAGGLCLLAGMLLLGHIVGSYDLDRVLEAGAKITGHRLYLPMLILFLLGAFTKSAQFPFHFWLPNAMAAPTPVSAYLHSATMVKAGVFLLVRFSPALAGTEAWFTIVGGVGFTTLLLGAFFALFQHDLKGLLAYSTISHLGLITALVGIDTELALVAAIFHIVNHAVFKASLFMAAGIVDHETGTRDMRRLGGLRHAMPITATLAIVAASAMAGVPLLNGFLSKEMFFAEAVASHDGSLLDQSMGWIALVASTLAVAYSLRFIHGVFFGALPRDLPQEPHEPPFWMRFPVEALVIVCLAVGIFPALTIGPYLLSAVQAVLGADAPEYSLEIWHGVNAPLIMSSVAFIGGIALYFLLAGWVARSPEGPPLFRLLQGKRIFERVLVTLSWKWARSLFRFAGTEKLQPQLRILVLMAFGAGAWMLWGAERLRPIVPPGDFAADVQLFVQARHRHLVPRGAFGQGLHSRLISIKERWLGGSESGEMTSAPLRIDSILDEAAPPPRYACYPTVAQFRPGVGAEQAEAWTRMLPAGARLTLRLHIPFCERLCWFCSSRTQRFRGRGARRLLAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV9</accession>
    <name>A0A2M9PEV9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000203">
        <property type="protein sequence ID" value="PJN96085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7556" checksum="6CA395FCA535AAE4" modified="2018-04-25" version="1">MSDQPPQTTLTIGWRTWLALGLTVTLSLTVALTFSGILTVALGLPLAWRIDRASYSWAEQAEAAPEGGPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF15</accession>
    <name>A0A2M9PF15_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Beta-ketoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04285</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000183">
        <property type="protein sequence ID" value="PJN96145.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018454">
        <property type="term" value="F:acetoacetyl-CoA reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042619">
        <property type="term" value="P:poly-hydroxybutyrate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011283">
        <property type="entry name" value="Acetoacetyl-CoA_reductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01829">
        <property type="entry name" value="AcAcCoA_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96145.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="25413" checksum="458BFE5CEE90415A" modified="2018-04-25" version="1">MGRVALVTGGSRGIGAAISVALKEAGYTVAANYAGNDEAAKKFTDETGIKTYKWSVADYEACAAGVAQVEADLGPIDVLVNNAGITRDAMFHKMTPQQWKEVIDTNLSGVFNMTHPVWGGMRDRKFGRVINISSVNGQKGQAGQANYSAAKAGDIGFTRALAQEGARAGITVNVIAPGYIGTEMVRAIDEKVLKERIIPQIPVGRLGEPEEIARIVVFLASDDAGFITGSTISANGAQFFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF42</accession>
    <name>A0A2M9PF42_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000182">
        <property type="protein sequence ID" value="PJN96148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9382" checksum="7D3E2662AC8F71F5" modified="2018-04-25" version="1" fragment="single">MTEAPKILLAHRLKTPKLPAFLGEYGKLASQCAAEGPKNLRFLAPLVDLELIGRERRMIERRENVIALGRQRRGKDAHRAGIGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA5</accession>
    <name>A0A2M9PFA5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Serine--glyoxylate aminotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03855</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 4 6">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000163">
        <property type="protein sequence ID" value="PJN96218.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000192">
        <property type="entry name" value="Aminotrans_V_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020578">
        <property type="entry name" value="Aminotrans_V_PyrdxlP_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024169">
        <property type="entry name" value="SP_NH2Trfase/AEP_transaminase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00266">
        <property type="entry name" value="Aminotran_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000524">
        <property type="entry name" value="SPT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00595">
        <property type="entry name" value="AA_TRANSFER_CLASS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="3 4" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_5" evidence="7">
        <location>
            <begin position="27"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="4">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000524-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU004504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96218.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="399" mass="42744" checksum="D5F59D863D17A21F" modified="2018-04-25" version="1">MSSQNPVFIPGPTNIPERLRHAVNVPTIDHRSADFGRMFRPLFAGVKEVLKTKTGEVILFPATGTAGWEAAISNTLSPGDRVLACRHGMFSHRWIDMCQRHGLDVQMLTAPWGAGAPADAFQAALAEDRDHRIKAVLVTHNETATGVRSDVAAIRRALDATGHPAMLFVDGVSSIASMDFRMDDWGVDVAITGSQKGFMLPAGLAIVGVSPKALAAMETAKLPRCFLDFRDMLTTNAKGGYPYTPPVQLLYGLGASLDMLRDEGLENVFERHRRIAEGVRRAVSAWGMSLCAQSPDLYSETVSAIVTPEGFESTKIVTHAAEKYGVAFGVGLGEVAGKVFRIGHLGSLTDVMMLAGLATAEMTMADLGLPIRLGSGVAAAQDYYRTTEATAVSRTLEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA6</accession>
    <name>A0A2M9PFA6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_03925</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CitM (TC 2.A.11) transporter family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000166">
        <property type="protein sequence ID" value="PJN96209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015105">
        <property type="term" value="F:arsenite transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000802">
        <property type="entry name" value="Arsenical_pump_ArsB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004680">
        <property type="entry name" value="Cit_transptr-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03600">
        <property type="entry name" value="CitMHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00758">
        <property type="entry name" value="ARSENICPUMP"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="28"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="58"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="97"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="134"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="221"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="243"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="272"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="311"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="345"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="389"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="domain" description="CitMHS" evidence="10">
        <location>
            <begin position="26"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF03600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="408" mass="42488" checksum="F1DED0A1D2670E15" modified="2018-04-25" version="1">MDLTIVLFLLVYLALGFGHLPGFKVDRTGAAVVGAMLLIALGRITPEAAWAAIDYRTIGLLFGLMVVSAAFVVAGFYDRVARQIGELKVDPPLLLAILIAVSAGLSALLTNDVVVVAMTPVLVSIALARRLNPVPFLLGFCFAANVGSAATIIGGPQNMIAAEALRLSFTGFLKVALVPALLGLPIVWAVIVVLYRGRWLLASPAGPVVAPQTIAFNQRETIKAFIVTAAVVGAFVLTDWPHMLVAMAGAAALLVNRRIASNDMLSRVDGDLLLLLMGLFVVNAALAATGLPQKLLGDLKGLGLDLHDPFSMLVAMSVLSNVVGNNPAVMLVAPFLTDVARPEALGAAIALGTGFSSNMLIFGSLAGIIVAEQGRAHGVTISFGEFSRAGLPTSILCLALAAGWILWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH3</accession>
    <name>A0A2M9PFH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000160">
        <property type="protein sequence ID" value="PJN96234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9158" checksum="AAEC12173A2A526B" modified="2018-04-25" version="1" fragment="single">MAAAAPTTADLTPPPFQEGLCDWSCGDGTPASLTYEDVPGARLIPDDPGFGDCLELERSESLQRLRYMGELPLHPGMRVEVRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM8</accession>
    <name>A0A2M9PFM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Oligoendopeptidase F</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_03225</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="6">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the peptidase M3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000130">
        <property type="protein sequence ID" value="PJN96322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1370.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013647">
        <property type="entry name" value="OligopepF_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042088">
        <property type="entry name" value="OligoPept_F_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045090">
        <property type="entry name" value="Pept_M3A_M3B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001567">
        <property type="entry name" value="Pept_M3A_M3B_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011977">
        <property type="entry name" value="Pept_M3B_clade3"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11804">
        <property type="entry name" value="PTHR11804"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01432">
        <property type="entry name" value="Peptidase_M3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08439">
        <property type="entry name" value="Peptidase_M3_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02290">
        <property type="entry name" value="M3_fam_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 6" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1 6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="Peptidase_M3_N" evidence="8">
        <location>
            <begin position="125"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M3" evidence="7">
        <location>
            <begin position="349"/>
            <end position="589"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF08439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="606" mass="67678" checksum="EDEEEE65A2E98CBC" modified="2018-04-25" version="1">MFEIIRDARDPASNEGLGALPEWDLTDLYAAEDAPELSRDLEWLGAECATFARDHEGRLADLDAAGLLAAIRRWERIQTVSGRIMSYAGLRHYQNTLDPARAKFFGDMQARITDATTPLVFFTLELNRVDDARLDALLAENADLARYGRVLERIRAMKPYQLSDELEKFLHDQSVVGSAAWNRLFDETMAGLEFEVDGETLGLEATLNLLSEQDRAQRQAAAEAMAVVFEDKAKLFARITNTLAKEKEVEDRWRKLPTPQTARHLSNDVEPEVVQALRDAVVAAYPRLSHRYYALKAKWLGLDTLQVWDRNAPLPREEDRRIPWDEARRTVLDAYAGFDPRMAEIATPFFEKGWIDAGVKPGKAPGAFAHPTVTEVHPYVLLNYLGKQRDVMTLAHELGHGVHQVLAAGQGELLSDTPLTLAETASVFGEMLTFQALLAAAPDKAARKILLAGKVEDMINTVVRQIAFYDFECKLHAARREGELTPDDINAIWMSIQAESLGPVFEFMPGYETFWSYIPHFIHSPFYVYAYAFGDGLVNALYAVYAEGDPAFADKYFALLEAGGSQNHKALLAPFGLDATDPAFWDKGLSLIASMIDELEAMEDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ8</accession>
    <name>A0A2M9PFQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_02885</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000112">
        <property type="protein sequence ID" value="PJN96383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="126"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="126"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="25631" checksum="412C5D133477B2E8" modified="2018-04-25" version="1">MLVVDDDARIRALLRKFLSRNGFWVTTARDAAHARRLLEGLDFDLMVLDWMMPGESGLELTASLRETLSTPILLLTARGDADDRIRGFEAGADDYLPKPFEPRELLLRISAILRRLPKPVPRAEPPKTLQLGEVRYDLNRGELWRGREPIRLTATESMLMRILAARPHEPVTRTELVEDLGGGVAEAQERAIDVQITRLRRKIETDPKAPRYLQTVRGSGYMLAPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR8</accession>
    <name>A0A2M9PFR8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000118">
        <property type="protein sequence ID" value="PJN96359.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96359.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9561" checksum="30F1707CD86E141B" modified="2018-04-25" version="1" fragment="single">MAASPKPAPHPAAVAAFVPAEERSRAAVLLSMLWRDKFATCAVIFLTLALLCALLGPALLGEAAIKQNLRGRNLAPFSLDQGWLFFLGAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD9</accession>
    <name>A0A2M9PGD9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000054">
        <property type="protein sequence ID" value="PJN96615.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="226"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="283"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="331"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="137"/>
            <end position="352"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96615.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="360" mass="39860" checksum="BCCCBC43E246065F" modified="2018-04-25" version="1">MGASRSSLMTSNRAGWAMAAPAFGLILIFVILPFALAFGLSFTNQRLFSPNPTQWVGTANFEKLLGVSTLTLEPERDAQGAVTLDAAGEPTYPRLRGYTRNNPDYPHLQGKQEWFSFNWGEKRTYVLASDVVFMKALRNTFVFVLVVAPIQGGIALLLALMVNQKLRGINFFRAVYFMPVVVSIVVVSLLWRFIYDGNNGLLNTLLSWLSFGAFSPVDWLGDPATALPAIIAMSIWQAVGFHMVIWLAGLQTIPPTLYEAAGIEGANRWQTFRYVTWPGLRNTAVLVLIVITMQAFALFAQIDVMTKGGPLDSTQTMVFQAVERGYRKQDIAAGSVISVVLFVIVLTISLIQRHLTREKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI8</accession>
    <name>A0A2M9PGI8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01160</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000040">
        <property type="protein sequence ID" value="PJN96667.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="8"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96667.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16533" checksum="65E7C29DD38599CD" modified="2018-04-25" version="1">MGEGWARGIAIDVTKNSVIRDNMVYDNYGEGLGGLSSSRLSFVGNTAHDNYSVQMYFDNSQYITARDNLVFHTGDRDYYRGGKPGTGMLIANEYAEFQKHSTGYVVTDNTLAGVGAPKYDGSYGWGGGLSNSTIAPNEILSAAAVQSDWTYLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK6</accession>
    <name>A0A2M9PGK6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_01145</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000039">
        <property type="protein sequence ID" value="PJN96675.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029151">
        <property type="entry name" value="Sensor-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017055">
        <property type="entry name" value="Sig_transdc_His_kinase_DctB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036431">
        <property type="entry name" value="STHK_DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103190">
        <property type="entry name" value="SSF103190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="10" id="KW-0418">Kinase</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0808">Transferase</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="277"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="domain" description="Histidine kinase" evidence="9">
        <location>
            <begin position="358"/>
            <end position="569"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="7">
        <location>
            <begin position="305"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96675.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="578" mass="62998" checksum="5806CE1E1B18530A" modified="2018-04-25" version="1">MRLGAISSVLALILVIWGGQIYLTRSLSEDQSAEAQVRATLYAGSLQSALQRHSVVPLLLSRDPILIEALEAHEYKEADARLATFREELGAGSIVLLDAQGRVVAASDDRPRGQDESKAAFFIAPSEDALTGPSNNTAFTIIEKPDAGGYSFQYSRRLVSGGGEMLGVIVVTVDLGLHEESWRRARVKVVVTDGEDQVLLASEPNWRGKKLSNLLATAESPSRVGQAISEARRSLGSDNFVYIAGTPHLRNEVKIGVRSWNLTFFATLEEVRAQVNAILALVVTGFALLIALAFYLLSRRARAESRRALRESDDLRQLNRRLSAEMAARRRVEANLKEAEQSLEQASKLAALGQMSAAVSHELNQPLAAMKTYLAGARLLLNRRRPEEALSSFQRIDDLIDRMGGITRQLKSYARKSEEVDRDPVDLRDSVRAALSMMAPQLGKMAVTITTTLPSEPAVVMADPLRVEQIIVNLLRNALDAVKAQDDRRIKIFLVLGETILLAIEDNGPGIKAPDKLFEPFYTTKRPGEGLGLGLAISAGFAAELGGRLVARNTPDGGAVFELLLPRERALALVQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGP7</accession>
    <name>A0A2M9PGP7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Cofac_haem_bdg domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000030">
        <property type="protein sequence ID" value="PJN96718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd14727">
        <property type="entry name" value="ChanN-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007314">
        <property type="entry name" value="Cofac_haem-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04187">
        <property type="entry name" value="Cofac_haem_bdg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cofac_haem_bdg" evidence="1">
        <location>
            <begin position="39"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04187"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="30526" checksum="316A2705A9D8446D" modified="2018-04-25" version="1">MAMTAGPAIVAPDRTGATMPEARWTDPIRQTSLSEAEALDRLATARVVLLGETHDSAQDHAWQARVLDGLSERRPVIAGFEMFPRHARPALDDWVESRLDLPGFLAAARWREVWGFDAALYLPLFKLCRSRRIPMRGLNIDRPLVSLIGRAGWDALPEAERGWLTPAVSAGTDYRRYLFEATGGVRPGRTAQSPDDPAFDRFVRAQQAWDRAFACALAEAQAKRPETLAVGIIGRGHLEYRLGVPPQLEALGLEPVLVALPSAPEGSGPIADLLPLASAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT9</accession>
    <name>A0A2M9PGT9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00655</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000020">
        <property type="protein sequence ID" value="PJN96756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22739" checksum="FEAE2D0A4AE80709" modified="2018-04-25" version="1" fragment="single">TCFNLLTKFLQPSSGTITFNGRDITKMPPAEIARLGMVRSFQISAVFPKLPVLENVRVALQRRRGDSFDFWRSEKALAHLDDEALGLIADVGLSEFAHHRAGELSYGRKRALEIATTLALQPEMLLLDEPMAGMAQQDVERITELIRRVSKNRTILMVEHNLSVVATLSDRITVLARGQVLAEGDYDAVSKDPRVVEAYIGVGHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV1</accession>
    <name>A0A2M9PGV1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Putrescine-binding periplasmic protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_00650</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Required for the activity of the bacterial periplasmic transport system of putrescine.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the bacterial solute-binding protein PotD/PotF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000019">
        <property type="protein sequence ID" value="PJN96766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF019574">
        <property type="entry name" value="Periplasmic_polyamine_BP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014929134" description="Putrescine-binding periplasmic protein" evidence="5">
        <location>
            <begin position="20"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRNR" id="PIRNR019574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="362" mass="39436" checksum="9723B7001C72E152" modified="2018-04-25" version="1">MLRLTAAALALSAAAPALAQDKGTVNIYNWSDYIAEDTVKKFEEATGYKVVYDVYDSNETLEAKLLAGNSGYDVVVPTSHFLQRQIAADIYQPLDKSKLPNLKNMDAGLMEQAAAYDADNAHSVIYMWGTIGIGINAEKVRERLGENAPVDSWALVFDPQYASKLADCGISVLDSPTEILPEALAWLGLDPTTSDPAELQKAADVLTAVRPYIRYFHSSQYISDLANGEICVAVGYSGDVFISAARAEEAKTGVEVAFNIPKEGALQWFDLMAIPSDAPNPEGAHAWINFVMEPQITADITNYVYYASANKEAMPLIAEEIRTDPAIFPPAEVIAKLFPAVTRDARTDRTITGLWTKVKTGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW3</accession>
    <name>A0A2M9PGW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000019">
        <property type="protein sequence ID" value="PJN96762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12064" checksum="72DF91FABC6336F4" modified="2018-04-25" version="1">MNAWADFASIGLTRWRLRIGVQHNLVANAILDAVAAVLILIALAFAMVATMYLLRTADGVPLYDAAALLADLRDRRENYWWLAFMLFSTLLPTLAHLAIGAFALFTLASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX0</accession>
    <name>A0A2M9PGX0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CoA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000016">
        <property type="protein sequence ID" value="PJN96783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032875">
        <property type="entry name" value="Succ_CoA_lig_flav_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02629">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13607">
        <property type="entry name" value="Succ_CoA_lig"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52210">
        <property type="entry name" value="SSF52210"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="50"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="Succ_CoA_lig" evidence="2">
        <location>
            <begin position="176"/>
            <end position="282"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02629"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="361" mass="37914" checksum="F021F9BE8BC540C7" modified="2018-04-25" version="1" fragment="single">MYHQGIQGIPYYLGIRSLADVATREDRVCVLNILGGESRQVTPTSHVFSGGNVVFGTSPGRGGQKLRTTIGDIPVFNNVREGLAAGHAFTTGVVYLPPSGVRDGVAELIRVNPELRKIVIITEKIAVHDAREIRAMAQANGVDVIGGNCLGVADSWSRVRIGGALGGDHPDESLLKGSVAIFSNSGGFTTTIAQYLGTAGWGTTTLVSSGKDVYIHYAASDFAHAFAADERSQAAVLYAEPGGYYEQGIDWTKPVVACVVGRWKSKLTRAVGHAGAMAGSGDSAQDKERWFMEAFGVPGLYTPQTPIVSAKGAVVTNIADIPAALTAVMALNGKAPDFAPRGDLALKPWVANDQGLRLPPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX4</accession>
    <name>A0A2M9PGX4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">Protein translocase subunit SecY</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">secY</name>
        <name evidence="14" type="ORF">CNY89_00515</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Component of the Sec protein translocase complex. Heterotrimer consisting of SecY, SecE and SecG subunits. The heterotrimers can form oligomers, although 1 heterotrimer is thought to be able to translocate proteins. Interacts with the ribosome. Interacts with SecDF, and other proteins may be involved. Interacts with SecA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="12">Cell membrane</location>
            <topology evidence="12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 12 13">Belongs to the SecY/SEC61-alpha family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01465">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003770">
        <property type="entry name" value="MLTG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026593">
        <property type="entry name" value="SecY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002208">
        <property type="entry name" value="SecY/SEC61-alpha"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030659">
        <property type="entry name" value="SecY_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023201">
        <property type="entry name" value="SecY_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10906">
        <property type="entry name" value="PTHR10906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00344">
        <property type="entry name" value="SecY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02618">
        <property type="entry name" value="YceG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103491">
        <property type="entry name" value="SSF103491"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00967">
        <property type="entry name" value="3a0501s007"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00756">
        <property type="entry name" value="SECY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="11" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="9 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 12" id="KW-0653">Protein transport</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0811">Translocation</keyword>
    <keyword evidence="5 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="197"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="241"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="272"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="304"/>
            <end position="326"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="332"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="392"/>
            <end position="417"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="437"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="489"/>
            <end position="511"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="517"/>
            <end position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005751"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU004349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN96790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="569" mass="61213" checksum="092A894890436340" modified="2018-04-25" version="1">MRHVAANALTLLVLALVLVFGLITWGQKQFTGAGPSTAPVSLQVERGEGIASVSEKLAAAGAISHPTVFRLGARYARLDAGLKYGDYEFPAHASMEAILRQLNEGGNVLRQIVVPEGWTSWQVVEAASNLSWGTFGKAKELQSRILFAIGLLMVYRLGTYIPVPGIDAARLQQFIEQAGGGIGGMLNMFTGGAVGRMAIFALGIMPYISASIIVQLMTAMVPSLAALKKEGEAGRKKINQYTRYGTVLLATFQAYGLSLGLEAEGMAHDPGWYFRLSCIITLVGGTMFLMWIGEQITSRGIGNGTSLIIFVGIVAELPAALAQFLTQGRTGALSPVVIIGILLMMVAVVAFVVFMERALRKIHIQYPKRQVGMKIYGGESSHLPIKVNPAGVIPAIFASSLLLLPATITTFAGTGAATGGWVDYVAAYLGRGQPLQMLLFGGLIVFFSYFYTANVAFKSDDVADNLKKQGGFVPGIRPGQKTIDYLDYVVSRILVVGSAYLAAVCLLPEILISEFSIPFYFGGTSLLIVVSVTMDTITQVQSHMLAHQYEGLIERSRLRSKQRGSKPRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P434</accession>
    <name>A0A2M9P434_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004900">
        <property type="protein sequence ID" value="PJN92321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6892" checksum="CCC4DE3EA9A89A2B" modified="2018-04-25" version="1" fragment="single">FRLPVMKAVGVSEEGDLEGLPAYAGAVDMLLIDAFRLPVMKAVGVSEEGDLEGLPAYAGAVDMLLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P456</accession>
    <name>A0A2M9P456_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-dehydroquinate dehydratase</fullName>
            <ecNumber evidence="5">4.2.1.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_30680</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01004884">
        <property type="protein sequence ID" value="PJN92327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21272">
        <property type="entry name" value="PTHR21272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7166" checksum="B96A427F5C07C5C4" modified="2018-04-25" version="1" fragment="single">ERDCAALAAELGVEVVFLQSNWEGQIIDWIHEARGTSAGIVINPGAFTHTSVAILDALNTFEGVVIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H0</accession>
    <name>A0A2M9P4H0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004535">
        <property type="protein sequence ID" value="PJN92437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011048">
        <property type="entry name" value="Haem_d1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008311">
        <property type="entry name" value="UCP028101"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07433">
        <property type="entry name" value="DUF1513"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51004">
        <property type="entry name" value="SSF51004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7187" checksum="7A38BD112ED0B7D4" modified="2018-04-25" version="1" fragment="single">EILSGGDGPHEVLLTPGGTQLAVANGGIATDTASGRAPLNPFEILSGGDGPHEVLLTPGGTQLAVANGGIATDTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L8</accession>
    <name>A0A2M9P4L8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004470">
        <property type="protein sequence ID" value="PJN92458.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92458.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7778" checksum="909CE25CD9ED2A36" modified="2018-04-25" version="1" fragment="single">LRLAALGLALSAFAAPLMSVLRRDLDFRPIAVINVTAGALAALVTVGLILRGYGYLSLIVGSLAATGYTIAAAQFC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S5</accession>
    <name>A0A2M9P4S5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004133">
        <property type="protein sequence ID" value="PJN92561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="54"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8325" checksum="235A30E9500B6C0D" modified="2018-04-25" version="1" fragment="single">GVNLLITIVLARTIGPAGMGLVAAALLAVEVIGGRRIAGGVAWTLIANYAVRGVNLLITIVLARTIGPAGMGLVAAALLAVEVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V3</accession>
    <name>A0A2M9P4V3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28425</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004064">
        <property type="protein sequence ID" value="PJN92584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="42"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7984" checksum="79AC5E7FAA4897ED" modified="2018-04-25" version="1" fragment="single">MLQTRSTPQTARARPADFVWQDPFLLEDQLSEEERMIRDAARGKLRAPTSGGFALLQTRSTPQTARARPAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P575</accession>
    <name>A0A2M9P575_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Endoglucanase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003731">
        <property type="protein sequence ID" value="PJN92696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3865" checksum="85224236D6C7E8EE" modified="2018-04-25" version="1" fragment="single">PLPADLRSFAPTNYYPSTLHLLALAHAREAMPQCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P580</accession>
    <name>A0A2M9P580_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003786">
        <property type="protein sequence ID" value="PJN92680.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92680.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6068" checksum="3EE6BFD88E670A8D" modified="2018-04-25" version="1" fragment="single">MTRTALEGFGKTLEATDEVVIEATGNSMAAARVLSPLVARVVIANPLQVKAIAHAHVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P584</accession>
    <name>A0A2M9P584_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Twin-arginine translocase subunit TatB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">tatB</name>
        <name evidence="9" type="ORF">CNY89_27330</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003698">
        <property type="protein sequence ID" value="PJN92711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008320">
        <property type="term" value="F:protein transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043953">
        <property type="term" value="P:protein transport by the Tat complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003369">
        <property type="entry name" value="TatA/B/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018448">
        <property type="entry name" value="TatB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02416">
        <property type="entry name" value="TatA_B_E"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01410">
        <property type="entry name" value="tatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0811">Translocation</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="6"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN92711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7308" checksum="98BC2C88C495F9AA" modified="2018-04-25" version="1" fragment="single">MFDVGWGELFLIAVVALIVVGPKDLPGLFRTLGQFTGRARAMARDFQRTLEAAADEAGVSEVQKTLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I3</accession>
    <name>A0A2M9P5I3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VapC toxin family PIN domain ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003511">
        <property type="protein sequence ID" value="PJN92775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6762" checksum="DC83B137FB478664" modified="2018-04-25" version="1" fragment="single">MTFLLDVNVLIALTDPAHVAHDDAHVWFAATGRHAWATCPITENGVLRILGNPKYPNSPGSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K6</accession>
    <name>A0A2M9P5K6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003363">
        <property type="protein sequence ID" value="PJN92822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008866">
        <property type="entry name" value="Phage_lambda_GpA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05876">
        <property type="entry name" value="Terminase_GpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="12015" checksum="2984DE7153C3C9FD" modified="2018-04-25" version="1" fragment="single">GTRPRHDAWSELTALLDRSWPHERGAHLRIARLAIDTGYEAPAVYSWSRAQGFAQVSPVKGVEGFNRSSPVSGPTFVDATEGGKRLRRGARLWTVAVSTFKAETYRFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N0</accession>
    <name>A0A2M9P5N0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Epimerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003283">
        <property type="protein sequence ID" value="PJN92847.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="1">
        <location>
            <begin position="3"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92847.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12569" checksum="95B1F5996DE75229" modified="2018-04-25" version="1" fragment="single">GQTVYGLDIAPLENARNLDAVRDNPKFHYMQGDIRELDTIKAFFRPEASVLYHLASVVGVRRYMEDPLSLIDIAIIGTRHLIALCVEHDVRILFTSTSEVYGRNPAVPWSE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P613</accession>
    <name>A0A2M9P613_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_09300</name>
        <name evidence="9" type="ORF">CNY89_22170</name>
        <name evidence="8" type="ORF">CNY89_24840</name>
    </gene>
    <organism evidence="8 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002943">
        <property type="protein sequence ID" value="PJN92977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002226">
        <property type="protein sequence ID" value="PJN93267.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000510">
        <property type="protein sequence ID" value="PJN95301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016180">
        <property type="entry name" value="Ribosomal_L10e/L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036920">
        <property type="entry name" value="Ribosomal_L10e/L16_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000114">
        <property type="entry name" value="Ribosomal_L16"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00252">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00060">
        <property type="entry name" value="RIBOSOMALL16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54686">
        <property type="entry name" value="SSF54686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L16" evidence="7">
        <location>
            <begin position="6"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN92977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93267.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="38" mass="3993" checksum="96955D55E438B705" modified="2018-04-25" version="1" fragment="single">MCSGSGEAKGGSDLNFGHFGLKATEPERITARQIEAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P694</accession>
    <name>A0A2M9P694_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002790">
        <property type="protein sequence ID" value="PJN93039.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93039.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11261" checksum="23FE5A4CF72D24DD" modified="2018-04-25" version="1" fragment="single">MLSRQHDVEDNYIRNANTHGVTVTHADGVTVRGNTVTLNGDQGLTQIPLVNVSALSRNVEIIGNTVSSVQDSLGDSWIVYGNDVSARSRFHWDGVFVNGVLQSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6C5</accession>
    <name>A0A2M9P6C5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002705">
        <property type="protein sequence ID" value="PJN93069.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="31"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93069.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6941" checksum="C5AAB939267FBE93" modified="2018-04-25" version="1" fragment="single">RDLDAAESVLRRWMRELTATPTTAFPGNGQMGADLAEIAALKKEVARLRAERAILRKAAAFFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D1</accession>
    <name>A0A2M9P6D1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002604">
        <property type="protein sequence ID" value="PJN93106.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93106.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9741" checksum="F467DD319F95E9B7" modified="2018-04-25" version="1" fragment="single">MKAVLEYYDARISSPERLTLELVGDAELRPLRRLPPHHAPAPRHPHGRGARPLPRLSPRVKAVLEYYDARISSPERLTLELVGDAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K2</accession>
    <name>A0A2M9P6K2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002497">
        <property type="protein sequence ID" value="PJN93140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="10041" checksum="247C6B6F9DE1ABAE" modified="2018-04-25" version="1" fragment="single">DGAVFSIALMIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQSLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P5</accession>
    <name>A0A2M9P6P5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">EH_Signature domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002421">
        <property type="protein sequence ID" value="PJN93175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028943">
        <property type="entry name" value="EH_Signature_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15611">
        <property type="entry name" value="EH_Signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EH_Signature" evidence="1">
        <location>
            <begin position="28"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF15611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="16817" checksum="4555FCFE7AF18E67" modified="2018-04-25" version="1" fragment="single">STRCMAIPGSAATRRSGTRQAPLLKLSFKRWLTGENIRFFLDVSDDSGESHMWEPRRKFWLGLHEQDRIREAWVAFHPEAERVARRRPVGSSLSFGKQVAGGSRGDTSLLILEFNDFIVVEGSHNYKVHVFDKHNVKTPKLRQSYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S8</accession>
    <name>A0A2M9P6S8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_22490</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002301">
        <property type="protein sequence ID" value="PJN93237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="12869" checksum="09E6E8748CDED850" modified="2018-04-25" version="1">MGRARGLRRGLGRAIPLDRPGLAQAWQEVIPFFAFSPEIRRVIYTTNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P793</accession>
    <name>A0A2M9P793_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21220</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002000">
        <property type="protein sequence ID" value="PJN93380.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93380.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17405" checksum="36B6C245AB1E9A19" modified="2018-04-25" version="1" fragment="single">GLGLAILLDQKIRAEGFIRTVYLYPMALSFIVTGTAWKWFLDPGIGLQAVVRSWGWQDFTFDWIKDSDMAIYTIVIAAVWQTSGFVMAMFLAGLRGIDNEVMKAAQIDGASTFALYRRIIIPQLRPAFMSAFVVLAHMAARSASPPARSTLAGPSAPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A0</accession>
    <name>A0A2M9P7A0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arsenical-resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_21155</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001981">
        <property type="protein sequence ID" value="PJN93390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015103">
        <property type="term" value="F:inorganic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004706">
        <property type="entry name" value="Arsenical-R_Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43057">
        <property type="entry name" value="PTHR43057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="79"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17274" checksum="45C262E37BDB1A43" modified="2018-04-25" version="1" fragment="single">MSVFERYLTVWVGLCIVVGVALGHVLPGVFQAIGAVEYANVNIPMAALIWLMIIPMLVRIDFASLGKVGAYWRGIGVTLFVNWAVKPFSMALLGWLFIGYLFRPWLPADQIDSYIAGLIILAAAPCTAMVFVWSNLTRGEPHFTLSQVALNDSIMIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K0</accession>
    <name>A0A2M9P7K0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20515</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001842">
        <property type="protein sequence ID" value="PJN93480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_21" evidence="1">
        <location>
            <begin position="54"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18467" checksum="1CCBF317E70ACFB7" modified="2018-04-25" version="1" fragment="single">MSTVISISTRRRYGVARVCRAWGVARAGVYRRRCAVEALQAPRRQARAAGADARRRLLEVIRQALVDSPFHGEGYRKVWARLRHAGLRTSKERVRRLMRENGLQAATRTGRPRGPRNHDGTIIPEAVDAMWGTDMTATFTVEHGQVAVFVAVDHCSAECVGIHAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L4</accession>
    <name>A0A2M9P7L4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001790">
        <property type="protein sequence ID" value="PJN93515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045622">
        <property type="entry name" value="DUF6441"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20039">
        <property type="entry name" value="DUF6441"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15522" checksum="645AE6173FB1DBAC" modified="2018-04-25" version="1" fragment="single">GESLDAAALVWSKAPVIVGAHDTGPLIRSKSGFWLAIPLPAAGKSLRGGRITPGEWERRRGLRLRFVYRRTGPSLLVAEGRLNTKGQAVVSRSKTGRGKVTAPIFLLVPQVKLPMRLDLARDADRALDSVPGLIVANWVEKRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S7</accession>
    <name>A0A2M9P7S7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001660">
        <property type="protein sequence ID" value="PJN93606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8664" checksum="67B10C6A9405F66B" modified="2018-04-25" version="1" fragment="single">MTHGDGVVIRDNTVAYDSNQIVNQIPLIDVSPSSRNVDIGENTVYGVDAGHENATVFLVANQAELQTALGNVRGGDTILLKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V8</accession>
    <name>A0A2M9P7V8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001644">
        <property type="protein sequence ID" value="PJN93613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="16028" checksum="2E62D4BD01020C25" modified="2018-04-25" version="1">MDDPSSSVLQFPDNRLLIDLCGELDRHLALVETRLGLSINRRGNQLTLHGDEAARTEAARVLNGLYQRLEQGRAVSPADVEAAIRFTPGPRPEAGQLDMFSAEPLEIRTRKKVVEPRTPVQKDYVRALFRHELTMNSTVPAEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P832</accession>
    <name>A0A2M9P832_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">SLC13 family permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_18980</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001539">
        <property type="protein sequence ID" value="PJN93704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004680">
        <property type="entry name" value="Cit_transptr-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03600">
        <property type="entry name" value="CitMHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="99"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="146"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="domain" description="CitMHS" evidence="7">
        <location>
            <begin position="22"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="18400" checksum="E94BBD4C4BA7C544" modified="2018-04-25" version="1" fragment="single">MIPVVPPGYEAHVALFLLACLFTAFATEKYPADVTAAAGAAVFLTLGLTPVAGIGAAFSNSAPITIGAMFVISGALVRTGLLDAMAGAIIARAGRRPRLAVAGFLAAAVIASAFVNNTPVVLVLIPVAIRLAGALDFAPTRLLIPLSYAAILGGTLTLIGTSTNLLIDGVARGAGLEPFGIFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P859</accession>
    <name>A0A2M9P859_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001525">
        <property type="protein sequence ID" value="PJN93715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="13"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10951" checksum="F9DD073D0E02CB1A" modified="2018-04-25" version="1" fragment="single">MDIKGHLQNNWAVGTGLYVNTSDGFTIRDSDMTDFKIAMNIWGTDDVTIEGNSIRRMNHDGLFLGGIDGIKIEDNFIGDYRSQYPSALHKDSIQFYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8K3</accession>
    <name>A0A2M9P8K3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17975</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001395">
        <property type="protein sequence ID" value="PJN93858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035996">
        <property type="entry name" value="4pyrrol_Methylase_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53790">
        <property type="entry name" value="SSF53790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13157" checksum="184E39B54403EEB4" modified="2018-04-25" version="1">MAEGTDLCAASVRPEHWALEAILPLEPAAWQAHLAQTAGDDDAALFDRLIRDARVEVPVHGNETGYVATGIRLSEISERLIAVWDGKPGLPGGVAETVARCRARGIPVEIIPAQAVDPSVERSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N1</accession>
    <name>A0A2M9P8N1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cellulase</fullName>
            <ecNumber evidence="3">3.2.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17800</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Endohydrolysis of (1-&gt;4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.</text>
            <dbReference type="EC" id="3.2.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the glycosyl hydrolase 8 (cellulase D) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.1.4" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001373">
        <property type="protein sequence ID" value="PJN93888.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.50.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008928">
        <property type="entry name" value="6-hairpin_glycosidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012341">
        <property type="entry name" value="6hp_glycosidase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002037">
        <property type="entry name" value="Glyco_hydro_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01270">
        <property type="entry name" value="Glyco_hydro_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48208">
        <property type="entry name" value="SSF48208"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012601"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93888.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5968" checksum="2DE355473A6E7F27" modified="2018-04-25" version="1" fragment="single">MLLAVLVGNRADFEAMWSFTRAELMVRDDGLAAWKWDPAATPRVTDVNNASDGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R5</accession>
    <name>A0A2M9P8R5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17515</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001334">
        <property type="protein sequence ID" value="PJN93928.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014644190" evidence="2">
        <location>
            <begin position="21"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93928.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="27019" checksum="163E94AB74298117" modified="2018-04-25" version="1" fragment="single">MSQGFAGGLALAVIISAANAAVATLTTYFARNLNHRAWLWKAVGLLAFLIGAGVCLGFNLGVAHLRDALEQGRTFEVALAESWATLWAEPLALDSFLSAVLMLLGVLAAIIVGLKTYHTIDPYPGYPAVYDAVIRAREDYASHLADAIGMLEDYRDVAIGSLRDANQDMRLWIREAVDALFGQSSLRSELDRFLEHADAKTNVLLAIYRDANRAARDGSVRAPAHFDQAYAFPALMLPRPAEESREEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R7</accession>
    <name>A0A2M9P8R7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001327">
        <property type="protein sequence ID" value="PJN93935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942212" evidence="1">
        <location>
            <begin position="21"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7926" checksum="BFD01AEDEB1742EA" modified="2018-04-25" version="1">MRPILILPAVLLLAACGADGSIKKPSEMTPQERCDNAALALALVEANMPEGSKTVERARLNYALICAAPLPRPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T8</accession>
    <name>A0A2M9P8T8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17385</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001316">
        <property type="protein sequence ID" value="PJN93948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008579">
        <property type="entry name" value="UGlyAH_Cupin_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05899">
        <property type="entry name" value="Cupin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="4"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="2">
        <location>
            <begin position="138"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="27631" checksum="35C2F7CDFFCA81C0" modified="2018-04-25" version="1" fragment="single">MPDRLLLVEDTASLRLLYETILTRAGHRMVSAGSLAEARGHCAQSAPRLVLLDLQLPDGDGLELLAQLPPETRVIVVTANGSINRAVQAMRAGAFDFLVKPFDENRLLSAVENALATAPAMPEEAAGHDAEPPAFAGFIGRSPAMQEIYRMVRAIGRSTATVFITGESGTGKEVCARAIHGVSNRARRPFWNAFSDSTGRFHVGHWTSEPGVRRVAYDETEFCVILEGRVRLEGEGGAVEFGPGEAFVVEGGFAGTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y4</accession>
    <name>A0A2M9P8Y4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001281">
        <property type="protein sequence ID" value="PJN93997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="11"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="12242" checksum="0FA173F54959635E" modified="2018-04-25" version="1">MPNIARDAEFQTVITTFETNPGACQDLLDLLTDAYAAFISRQPGFISAGLHVNDAQTRIANYSQWTRREDYQAMLRSEEMRARNREITKLCRSFEPVMYEVAQVFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P961</accession>
    <name>A0A2M9P961_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001239">
        <property type="protein sequence ID" value="PJN94049.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94049.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="36536" checksum="9D83B4302224BB6D" modified="2018-04-25" version="1" fragment="single">LGGTRRSGGGAGGILHVWYPLGEVIVPADVIVTTAAQLTTALNAVPSNLARRYIIGLASGFQGWTSGNDRFTYPSNYNKGTTCVQIRSEDRLSPATFRELRAQNSRNVEFEGLEFINPARDVFGFPGTPGAITGGAVSLDISNSKGVAPWYVKVRNCYFDGVYHGIAWDNPERARIEYTTICGYANDGVRIYGTSNTINPSVRDVVFDHCYISPLSQRFTFPNVTEISYTFDTRNACDPRRSDEYQRGSSSTFDDLNGVSRTISATIKGQRHCDAIQSIRTNIDIKILDCEFVHPDAYTHCMFFQTNNDPSVGFGWPFVPHSTGFEMRRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P977</accession>
    <name>A0A2M9P977_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PS_pyruv_trans domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001224">
        <property type="protein sequence ID" value="PJN94072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007345">
        <property type="entry name" value="Polysacch_pyruvyl_Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04230">
        <property type="entry name" value="PS_pyruv_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PS_pyruv_trans" evidence="1">
        <location>
            <begin position="26"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17376" checksum="9163E69DD013DD70" modified="2018-04-25" version="1" fragment="single">MLLYSGGGYFGESADSLYERYVAARRRHNRHLAWLDDFSNAAKAVIAVGVGPLTFNKQAVRDLFDASSAVLVRDAESLAYCRAYGFPTHNLRQCCDMALSMPIVGDESRSGVALHVPNMPRQHLETIMGVLASSPAGKYAERIHVIYDAPPAGGSLAFEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P998</accession>
    <name>A0A2M9P998_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">YdiU family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_16400</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SELO family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001188">
        <property type="protein sequence ID" value="PJN94118.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003846">
        <property type="entry name" value="SelO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32057">
        <property type="entry name" value="PTHR32057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02696">
        <property type="entry name" value="SelO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="348"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94118.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="348" mass="38563" checksum="BEF125AC31C9249A" modified="2018-04-25" version="1" fragment="single">RFEPLPGGYDPPLALRYHGHQFRSYNPDLGDGRGFLLIQLRDLVDDRLLDLGTKGSGRTPWSRTADGRLTLKGGVREILATEMLEALGVYTSKTFALIETGEALTRGDEPSPTRSSVLTRLSHSHVRIGTFQRLAALGQLDEMRALVDHCRTVYWPEADGVAGFYDAVVGAVARLGAEWFAAGFVHGVLNTDNVNVTGESFDYGPWRFLDTFDPAFTAAYFDQTGLYSFARQPEALHWNLARLGECLIPISTQAEIQAAFETFPARFHRALSAQTFARLGFAPGDPVAAEPLMHAFWGAMQDTRPPFQQVFHDLLGGDPARLRESPIRRTFETAVWAEVVEGLRDLPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E6</accession>
    <name>A0A2M9P9E6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001156">
        <property type="protein sequence ID" value="PJN94168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7357" checksum="285F8DDEEFB23A08" modified="2018-04-25" version="1">MGAFTSQADTDAAIALFRGKGLQATSIGDPRLGRRVYVGPVTTQGALDAVLGTAFEAGFVAPYPSEFFRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H6</accession>
    <name>A0A2M9P9H6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001133">
        <property type="protein sequence ID" value="PJN94196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035418">
        <property type="entry name" value="AraC-bd_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14525">
        <property type="entry name" value="AraC_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AraC_binding_2" evidence="2">
        <location>
            <begin position="101"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF14525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="325" mass="35224" checksum="EC2AA8CD1DD7F8E7" modified="2018-04-25" version="1">MVGGRHETSCPSCLRSSRRSRPSHRRRSSGAPCATSPFSDFRQAASAGILPADRSRRAGPGGGPLAGDAIFERALVSDAEGRPISQPGKTSSQDWDEVNDFCRRVYMPYRVRPLGHNLAPDATMRRARVGGIIVTRFAYGVPIHLDEFDPAAGNILVLNTLSGMLRHKVDNGSDAVTGPGDSFVVDCSRTDYWLDGDKDHLQLNLTIPHDLIAGVARRWFGFVPDDRLWTRRLAFGGEGSRWQALLRYVVQSIRSDRGAASAGAMQRHLEEMICLDLLDAWAAGAGVRLADGARRVMSGSKPMNSMRVMRSPAIALAVISSGASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M9</accession>
    <name>A0A2M9P9M9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15625</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001096">
        <property type="protein sequence ID" value="PJN94247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="73"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10551" checksum="48218F1618C4B24A" modified="2018-04-25" version="1">MEDRMSDGSHASTQGRDFRSYGAPLDLVDRTDIDYPERLKLLQEWQAELARTGAPEEKQEEIRGAIQALEMGAAVQRDDAEEIPEGAAHREGPNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q2</accession>
    <name>A0A2M9P9Q2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001078">
        <property type="protein sequence ID" value="PJN94274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032807">
        <property type="entry name" value="GNVR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13807">
        <property type="entry name" value="GNVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="151"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="domain" description="GNVR" evidence="2">
        <location>
            <begin position="101"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13807"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="19970" checksum="84F49D4BFA64BE3B" modified="2018-04-25" version="1" fragment="single">MAISFRSRNPQLAADVANATADSFVREQIETKAAQARQGGEWLEQRMSEMRGKMNTATQIAQEFRSRHDYSVKPPGARLVNGQILRDDEAAASQPTLEELEVTADTYRQLYESFLRAFTDNLSQQSYPVADARVITAATRPLAPSHPRKKLVLAFGLVAGLVVGVILIDLATGVSGAGRAPKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W2</accession>
    <name>A0A2M9P9W2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001054">
        <property type="protein sequence ID" value="PJN94311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14383" checksum="2C67C19EC0CD4939" modified="2018-04-25" version="1" fragment="single">IHLLRINANERALCGALAGFLQPLFPQHRVHVEFNRHGIVPKALALPDGDGMLTMQAVFPDIIAHQPGHDAQNLLAIEVKKSMSQYDPARDRLKLIAMREQLGYRHGLALQLSTGPDAHQELVQWEWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA36</accession>
    <name>A0A2M9PA36_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">CitMHS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_14855</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001015">
        <property type="protein sequence ID" value="PJN94381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004680">
        <property type="entry name" value="Cit_transptr-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03600">
        <property type="entry name" value="CitMHS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="13"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="66"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="152"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="CitMHS" evidence="7">
        <location>
            <begin position="26"/>
            <end position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="189" mass="20057" checksum="B7B82E772A7DA5B4" modified="2018-04-25" version="1">MFRVPDFLTQGDMPAILTLVILAAMLVVFLLEIYPPEVTAMGGAAAVVLLGVVPQDQVLRAFSNPAPWTIAAMFIVSGGLVRTGLINNLTLAITRHAAQRRGLVLVACALFLMVSSPFVNNTPLVVVMLPVAVRLAHSMSLSPSKLLMPLSYVTVLAGMISMIGTSTDGVGAPVLGEVRSRLRRPRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA71</accession>
    <name>A0A2M9PA71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Gfo/Idh/MocA family oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000988">
        <property type="protein sequence ID" value="PJN94424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000683">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01408">
        <property type="entry name" value="GFO_IDH_MocA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="2">
        <location>
            <begin position="106"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="33192" checksum="44533ADA7D88D4E3" modified="2018-04-25" version="1" fragment="single">VVAAYSPTEARRAAFAADWPDFPLTDRLEDALTAPGVEAVLILTPPNTHLALVRQAAMAGKHVLLEKPLETATDRAEELVVRCLRQKVTLGVVLQHRFRPAAERLKALLDEGALGEILGCSAADPALGGRSPITTNPGRGTRDRDGGGVLLTQGIHTLDLMLWLAGPVASVQGYARTLDHRMETEDTACAALHFRSGALGVVEATTSAFPGFPERIDLTCSLGSARLEGAGLTVLWRDGRRLDLAPEAGPGGTGADPMAFSHAAHRALIADFAAAIREDRPPRITGRDAMRVHRLIDAILESESVNSSIIPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA98</accession>
    <name>A0A2M9PA98_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000964">
        <property type="protein sequence ID" value="PJN94457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021323">
        <property type="entry name" value="DUF2927"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11150">
        <property type="entry name" value="DUF2927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="160"/>
            <end position="245"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="26436" checksum="F8C0EC2210814476" modified="2018-04-25" version="1">MKVSDGPDVNFLVMVLNTQEQSVAAQVTSAKFPGFQPAVLGAIANTPLDTFCTAYAFAEPTAPSTYAAVMVLIRAEHPPFTRLSCVHEEMAQAMGLPNDSPEARPSLFNDSLEFAFLTEHDEILLRMLYDPRLRPGMSIAEAGPLLPAIARDAMAPKACGWPRWRSFDTPPTARRPRRGLTEAPPPRPGDRGAMWEPARKPSPVGAGREHPVLGRRGETPRGAGSGAHGRAITGNLPPENPGRFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA99</accession>
    <name>A0A2M9PA99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ppk2</name>
        <name evidence="5" type="ORF">CNY89_14290</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000953">
        <property type="protein sequence ID" value="PJN94475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016898">
        <property type="entry name" value="Polyphosphate_phosphotransfera"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022486">
        <property type="entry name" value="PPK2_PA0141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028756">
        <property type="entry name" value="PPK2_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03707">
        <property type="entry name" value="PPK2_P_aer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="4">
        <location>
            <begin position="51"/>
            <end position="276"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="306" mass="36501" checksum="44D5094AB79B8C99" modified="2018-04-25" version="1">MALPEDLTSPVDWLEAELEDMMDEDFELEMSEPALSMELRRLYRTVRPPSMDRRSYFLELLKLQSELIKLQAWVQHHNKKIVVIFEGRDSAGKGGVIKRISQRLNPRVVRVVALPAPSDREKTQWYFQRYVPHLPAGGEIVLFDRSWYNRAGVERVMGFATEDEVEQFFHDVPEFERMLVRSGITVIKYWFSITDAEQQMRFLMRIHDPMKQWKLSPMDLQSRVRWEDYTKAKEEMFFRTNIPEAPWHIVEGNDKKRARLNCIAHLIDQIPYEDVPHEEITLPERVFNPTYERQILEDRLYVPGRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA4</accession>
    <name>A0A2M9PAA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-formylglutamate amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000958">
        <property type="protein sequence ID" value="PJN94466.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011227">
        <property type="entry name" value="UCP029730"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF029730">
        <property type="entry name" value="UCP029730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94466.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="27951" checksum="0B245C9173B6504F" modified="2018-04-25" version="1">MKDAPFDLVNPDGASRVLLLCDHASNRVPDSVAGGDLGLPPAEMGRHIAYDIGVHGVTLELARLLDAPAVLGRFSRLVIDPNRGEDDPTLVMRLYDGTIVPANRRITPEERERRLDAWHRPFHAAIDTLIETRLAAGVPPALISIHSFTPRLQGRSPRPWHVGVLWHVDDRLSAPLIARLEAEPDLCVGDNQPYAGQLEGDTLSRHGLRRGLRHVLIEIRQDLIGTAEGQRLWATRLAPMFAEIVAATNEAPHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ5</accession>
    <name>A0A2M9PAJ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_13910</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000918">
        <property type="protein sequence ID" value="PJN94542.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011014">
        <property type="entry name" value="MscS_channel_TM-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82861">
        <property type="entry name" value="SSF82861"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 9" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="281"/>
            <end position="302"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94542.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="302" mass="33355" checksum="8D769A2CB13DE771" modified="2018-04-25" version="1">MGATRVSALDLLRVIVELALLLWLAAFAARLLEARLQQAPNLTPSLRVLTAKLVRFSLIGLALLVAVTSTGIDLTGFALFTGALGVGIGFGLQKPISNLISGVILLLDRSIKPGDVIELTDPGDHQKLLFGWVTALNARYVSLTTRDGTEWLVPNEDLISRRVINWSYTHRRLRLLTPIAISFDSDVPLAMRLVQEAALETPRVLRQPEPVCRLMSFGDSTVNFETRFWIDDPANGVINVRSQFLVAVWSKFRSNGIRTPLAHRDLFIKPDSELKVRFEPGLFGSSAPMPGRDPTRQDSPVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU4</accession>
    <name>A0A2M9PAU4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Lipopolysaccharide biosynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000854">
        <property type="protein sequence ID" value="PJN94642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="328"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="388"/>
            <end position="411"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="439" mass="47935" checksum="858EFA958D4D6663" modified="2018-04-25" version="1" fragment="single">YADAPEEMTANAIAGDLITRIEFIGFEPDITRQRGIPGATILTIAFNAPTADLAVRGANELVNLILQENMRLRTDRAGDTATFFQAESERLRAEIERQSARIAEMKTANVDALPDSLNARRAQQQVEQERMLALEREESALRNQRATVVWVFERTGRSSTVTLSPEEQELENLKSQLIQQRAIYAPSSPQIRLLEARIKALDGLVAEQQAARTTPGVDGTTAAPTSTLDVELAPIDARLGYIAQEKALIAKTLADLETSIQATPNNEMTLGGLEREMANLEAQYEAARANLGQAAIGERIEVLSKGERFSLIQPPTEPTSPASPNRPLIASAGVVGGLGLGLGFVLLLEMLNRSIRRPSEIAERLGTQPFATIPYIRTEGERRWRRNVIVGALLFIVVAIPLGLLAVHSFYQPLDTLFWGLEEQPPAAPQNLTMSTGAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX4</accession>
    <name>A0A2M9PAX4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L31</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_13135</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Binds the 23S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000839">
        <property type="protein sequence ID" value="PJN94669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.830.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034704">
        <property type="entry name" value="L28p-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002150">
        <property type="entry name" value="Ribosomal_L31"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042105">
        <property type="entry name" value="Ribosomal_L31_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33280">
        <property type="entry name" value="PTHR33280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01197">
        <property type="entry name" value="Ribosomal_L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01249">
        <property type="entry name" value="RIBOSOMALL31"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143800">
        <property type="entry name" value="SSF143800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00105">
        <property type="entry name" value="L31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 8" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003795"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011838"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8131" checksum="D85809B1F67CEE75" modified="2018-04-25" version="1">MKKGIHPDYHFIEVKLTDGTTYRTRSTYGAEGQTLALEIDPSVHHAWTGGSAKLMDTGGRVTKFKKKYEGLGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB20</accession>
    <name>A0A2M9PB20_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidylprolyl isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000810">
        <property type="protein sequence ID" value="PJN94722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027304">
        <property type="entry name" value="Trigger_fact/SurA_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109998">
        <property type="entry name" value="SSF109998"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="21874" checksum="59AB0E4EDD094A2D" modified="2018-04-25" version="1" fragment="single">MGEMAWLRIWLAVALLAGWGAAPIEVRAQNPFEPALTVNNSVITRYDIEQRMALLDALGARGDLREQATDQLTEDRLKVQAAKALEIELPEGAVYAGIEEFAQQRGLTVDQVFQALSARKIDTQTMDDFVESGLMWREVVGARFRQKAMPSESDLDAALAVAENAPVEMVEMSEIALPFAERGEAETLALAERLSRQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB36</accession>
    <name>A0A2M9PB36_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DoxX family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000792">
        <property type="protein sequence ID" value="PJN94750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6431" checksum="CCE8A60EB8318030" modified="2018-04-25" version="1" fragment="single">FAVVAGVLFHYVPAQSLEGMNAYVQILMFQKNLVIAGGLLVLGAFGPGALSLEARQGRAALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE0</accession>
    <name>A0A2M9PBE0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000733">
        <property type="protein sequence ID" value="PJN94848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16990" checksum="452878EFCF64F92F" modified="2018-04-25" version="1" fragment="single">ETRDFAAKKAGFGNRETFRQAEHVVQHAEPELVEAMDRNVVSISAAHRASKLPAEKQREIAKTGRTFADLQRDLHRRHREKFEDLDDQSKVQRLCSAVMDIAYSQMSADEFRRLAPRPTLERLQQVALPAFIFLRDMVEVADDQTRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG5</accession>
    <name>A0A2M9PBG5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 8">Ferrochelatase</fullName>
            <ecNumber evidence="7 8">4.99.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Heme synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Protoheme ferro-lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hemH</name>
        <name evidence="9" type="ORF">CNY89_11795</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Catalyzes the ferrous insertion into protoporphyrin IX.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>2 H(+) + heme b = Fe(2+) + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:22584"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
            <dbReference type="EC" id="4.99.1.1"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Fe-coproporphyrin III + 2 H(+) = coproporphyrin III + Fe(2+)</text>
            <dbReference type="Rhea" id="RHEA:49572"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:68438"/>
            <dbReference type="ChEBI" id="CHEBI:131725"/>
            <dbReference type="EC" id="4.99.1.9"/>
        </reaction>
        <physiologicalReaction direction="right-to-left" evidence="6">
            <dbReference type="Rhea" id="RHEA:49574"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="7 8">Porphyrin-containing compound metabolism; protoheme biosynthesis; protoheme from protoporphyrin-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7 8">Belongs to the ferrochelatase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.99.1.1" evidence="7 8"/>
    <dbReference type="EMBL" id="PHNO01000713">
        <property type="protein sequence ID" value="PJN94883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00252">
        <property type="reaction ID" value="UER00325"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006783">
        <property type="term" value="P:heme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00419">
        <property type="entry name" value="Ferrochelatase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd03411">
        <property type="entry name" value="Ferrochelatase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00323">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001015">
        <property type="entry name" value="Ferrochelatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019772">
        <property type="entry name" value="Ferrochelatase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033644">
        <property type="entry name" value="Ferrochelatase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033659">
        <property type="entry name" value="Ferrochelatase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11108">
        <property type="entry name" value="PTHR11108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00762">
        <property type="entry name" value="Ferrochelatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00109">
        <property type="entry name" value="hemH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00534">
        <property type="entry name" value="FERROCHELATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 7 8" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="2 7 8" id="KW-0408">Iron</keyword>
    <keyword evidence="4 7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="7">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="296"/>
        </location>
        <ligand>
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007718"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024536"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU000607"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="345" mass="38880" checksum="CD755B050B8BD0FD" modified="2018-04-25" version="1">MTTTTFAPQDHPPVPRAKIGVIVSNLGTPDATDYWSMRRYLNEFLSDQRVIDYPRWKWQPILQLIVLTKRPFSSGAAYRGIWDKERDESPLLVITRAQTAALAAKMAESYGDAVMVDFAMRYGNPSTKSVISRMQAAGCDRILFFPLYPQYSAPTTATACDEAFRALMELKWQPALRTAPAYCGDALYIDALAQSVERAYAALDHRPDVLVTSYHGVPERYLREGDPYHCQCHKTTRLLRDRLGFGKEEVVLTFQSKFGPEEWVKPYTVEEVARLAQAGKKRIAIMAPAFSADCVETLEEINEEIRESFLHAGGEVFTYIPCLNAEEAHVEALAAAIRRELSGWV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH8</accession>
    <name>A0A2M9PBH8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Ribonuclease E/G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000709">
        <property type="protein sequence ID" value="PJN94890.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004659">
        <property type="entry name" value="RNase_E/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30001">
        <property type="entry name" value="PTHR30001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="S1 motif" evidence="2">
        <location>
            <begin position="39"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="93"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94890.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12965" checksum="3751A5E60FCACA4F" modified="2018-04-25" version="1" fragment="single">MTKKMLIDATHAEETRVVVVDGTKVEEFDFESLNKRQLAGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPKADREALLREEAEAAREEEEAAAKPKPRSRTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN9</accession>
    <name>A0A2M9PBN9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000678">
        <property type="protein sequence ID" value="PJN94951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="1">
        <location>
            <begin position="225"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="325" mass="35540" checksum="84243CE1F16C1070" modified="2018-04-25" version="1">MGRRSDVAKLNIGFILARRFTLCALANFVDVLRLSADEGDRSRPILCGWKVLSPTMDPIASSCGIVVQPDERLGDPGRFDYLVVVGGLVDEIESLHPETVRFLEQAAGAGAPLVGVCTGTFALHRAGLMQGYRVCVSWFHHDDFLERFDGLKPVSDQIFVVDRDRLTCSGGVSSAHLAAFIVERHLGRARAAKSLHIMIIDAAMAAEEPQPGIPLALATEDALARRALLVMQQSIDAPLSVQRIAAQLGVSRRKLERHFHEALGTTPLAAHRMIRIELAKHLLATTRRSATQIAADTGFCDLPHLIRAFRAAENMTPEAFRKSRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBQ5</accession>
    <name>A0A2M9PBQ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GTP pyrophosphokinase rsh</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_11285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000671">
        <property type="protein sequence ID" value="PJN94968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008773">
        <property type="term" value="F:[protein-PII] uridylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00277">
        <property type="entry name" value="PII_uridylyl_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010043">
        <property type="entry name" value="UTase/UR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47320">
        <property type="entry name" value="PTHR47320"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01842">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0511">Multifunctional enzyme</keyword>
    <keyword evidence="3 9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HD" evidence="8">
        <location>
            <begin position="18"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="7">
        <location>
            <begin position="257"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="7">
        <location>
            <begin position="367"/>
            <end position="442"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00014315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="48786" checksum="F70E9AFE890FB33F" modified="2018-04-25" version="1" fragment="single">FGRVVAMMQFNMYHHYTVDEHTIRTISTLSQIERGELAAELPIATDIVGKGVNRRVIYVALLCHDLGKGSGRDHSQVGAEIARTLCPRLGLSPEETELVAWLVTHHLLMSDVAQKRDLTDPRTVRDFAAAVKSPSRLKLLTLLTVCDIRGVGPGIWNNWKAMLLRALHAETMEHLTGGGQANTRMDREEAAKTALAGALKGWSAKAIAAETARHYAPYWLGFDTPTHAIFAKLIQRLGEGEEPAMRVSQEPARDATQACFAMSDHPGIFARLAGALALAGANVVDARTYTSSDGIATAAFWIQDNEGRPYEKARLSRLRSSVLRTLKGEILAKEALRDRDKVKKRERDFTVPTRITFDNTGSEIYTIIEVETRDRPGLLHDLARTLTANSVSISSAIIATYGEQAVDVFYVKDLFGLKLHAEAKRRALDTRLRAAIEPKTPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT6</accession>
    <name>A0A2M9PBT6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000651">
        <property type="protein sequence ID" value="PJN95007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014689750" evidence="1">
        <location>
            <begin position="24"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14180" checksum="57EB61BD6D9E7D95" modified="2018-04-25" version="1" fragment="single">MNSGRFLRSAALAALVSAGFAESAWSVELHYAIGAVGNDVENLRQMLKPWEEATGNTVTVVPMPASTSDQFGQYRLWLAAGNKDIDLYQTDVIWAPQLAGQLVDLKEAAKDLTAQNFPAIVESQTVDGRLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU1</accession>
    <name>A0A2M9PBU1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ATP-dependent RecD-like DNA helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000654">
        <property type="protein sequence ID" value="PJN95001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041451">
        <property type="entry name" value="RecD-like_SH13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027785">
        <property type="entry name" value="UvrD-like_helicase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18335">
        <property type="entry name" value="SH3_13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13538">
        <property type="entry name" value="UvrD_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0347">Helicase</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="141"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="524"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="524" mass="56317" checksum="D8DC30E9916626D9" modified="2018-04-25" version="1" fragment="single">MGGVGRLGARAPRPGSTARARSSQPPQSSHMGDGHCGLPTAELARRAETLLEAPRALIDTALELELTEGVVTADSLGDTPCVFLSGLYHAERGVADRLRRLLSGALPWPEIDADKALPWIEGRTGLTLAASQAEALRLALRSKVLVVTGGPGVGKTTLVNSVLRILSAKGVRLLLCAPTGRAARRMTEATGLEARTIHRLLEFDPKTFGFKRNEESPLECDLLVVDEASMVDVPLMQSLLKAVPDAAALLIVGDIDQLPSVGPGQVLADVIGSGAVPTVRLTEVFRQAAQSRIIVSAHRINQGRMPDLAKPEGETDFYFVPAADPDQAVRRIVELVQSRIPGRFGLNPIRDIQVLCPMNRGGVGARSLNVELQAALNPSGAVKVERFGWTFAPGDKVMQIENDYDKEVYNGDIGYVDGVNIEEGELTASFDGRAITYGFGELDTLVPAYAATIHKSQGSEYPAVVIPVLTQHYAMLQRNLLYTGVTRGKRLVVLVGQTRAVAIAVKNVSGRKRWSKLGEWLAQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC29</accession>
    <name>A0A2M9PC29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000605">
        <property type="protein sequence ID" value="PJN95101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19270" checksum="C43EE842B75D978D" modified="2018-04-25" version="1">MKSVLFGAVASALLLAGCDSLNQREVTNGAEVTATVTSVDPKTREINLKTQQGEAVTLTATPEMRNFDQIKPGDTAVLQMFGSVAVRVADGTTPEGRETFALLGRAPEGERPGAIMGQVTTATVRFVGYNPSTFEAEIIGPDGDRMIVPVQPGMRAFAAARTPGERVEVTISDAVAMFVTAPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC64</accession>
    <name>A0A2M9PC64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000585">
        <property type="protein sequence ID" value="PJN95140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="12187" checksum="061399877A27430A" modified="2018-04-25" version="1">MATWYSETEVVARVEGLTVTRLRAYVATHTLEPEEHEGRLAFREADLARARLLAELSSDFELDEDAAAMVVSLIDQIHGLRRRLRSLGAALSEEPEEIRARIGARLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC96</accession>
    <name>A0A2M9PC96_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Nitrogen regulatory protein P-II</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10290</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="1">Homotrimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the P(II) protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000588">
        <property type="protein sequence ID" value="PJN95134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030234">
        <property type="term" value="F:enzyme regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002187">
        <property type="entry name" value="N-reg_PII"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011322">
        <property type="entry name" value="N-reg_PII-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015867">
        <property type="entry name" value="N-reg_PII/ATP_PRibTrfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017918">
        <property type="entry name" value="N-reg_PII_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002332">
        <property type="entry name" value="N-reg_PII_urydylation_site"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30115">
        <property type="entry name" value="PTHR30115"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00543">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039144">
        <property type="entry name" value="GlnB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00340">
        <property type="entry name" value="PIIGLNB"/>
    </dbReference>
    <dbReference type="SMART" id="SM00938">
        <property type="entry name" value="P-II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54913">
        <property type="entry name" value="SSF54913"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00638">
        <property type="entry name" value="PII_GLNB_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51343">
        <property type="entry name" value="PII_GLNB_DOM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00496">
        <property type="entry name" value="PII_GLNB_UMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="modified residue" description="O-UMP-tyrosine" evidence="4">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR039144-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR602187-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="12180" checksum="CDD299587FCA3977" modified="2018-04-25" version="1">MKKIEAIIKPFKLDEVKEALQEIGIQGLSVTEAKGFGRQKGHTELYRGAEYVVDFLPKVKIEVVLADEQVDAALEAIISAAKTGKIGDGKIFVSPVEQAIRIRTGEEGNDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA2</accession>
    <name>A0A2M9PCA2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000572">
        <property type="protein sequence ID" value="PJN95171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="30"/>
            <end position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7369" checksum="99B76E6F91E84851" modified="2018-04-25" version="1">MSLLRKGEGRFLERDGARIRIEVTGRADGPPLLLLHGGFGSVEDFEPLAPMLAGFRLIAMDSRGSASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC0</accession>
    <name>A0A2M9PCC0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Disulfide bond formation protein B</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09955</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the DsbB family. BdbC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000564">
        <property type="protein sequence ID" value="PJN95191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015035">
        <property type="term" value="F:protein-disulfide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003752">
        <property type="entry name" value="DiS_bond_form_DsbB/BdbC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012187">
        <property type="entry name" value="Disulphide_bond_form_BdbC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023380">
        <property type="entry name" value="DsbB-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43469">
        <property type="entry name" value="PTHR43469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02600">
        <property type="entry name" value="DsbB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158442">
        <property type="entry name" value="SSF158442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="45"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="69"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007602"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="14899" checksum="630A69097A900F4E" modified="2018-04-25" version="1">MANQLTPGAERALTAAFLLALAATLGALFIGEVLGQVPCRLCWHQRIAMFPLVLILGVALWRGEADGRFYALPLVVAGIGAALWHSGLYAGVISEAVIPCTQDGPSCTDKAGQTILGLPLPYLSLAAFTAIGLCLLNVKGSRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC5</accession>
    <name>A0A2M9PCC5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">F0F1 ATP synthase subunit gamma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_09845</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ATPase gamma chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000556">
        <property type="protein sequence ID" value="PJN95207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd12151">
        <property type="entry name" value="F1-ATPase_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035968">
        <property type="entry name" value="ATP_synth_F1_ATPase_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000131">
        <property type="entry name" value="ATP_synth_F1_gsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023632">
        <property type="entry name" value="ATP_synth_F1_gsu_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11693">
        <property type="entry name" value="PTHR11693"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00231">
        <property type="entry name" value="ATP-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00126">
        <property type="entry name" value="ATPASEGAMMA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52943">
        <property type="entry name" value="SSF52943"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00153">
        <property type="entry name" value="ATPASE_GAMMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="7" id="KW-0139">CF(1)</keyword>
    <keyword evidence="4" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007681"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="16631" checksum="FD67063C95D9512E" modified="2018-04-25" version="1" fragment="single">KLVSHVDQGAIKRLGYADASAIAQEVLARYNAGEFDVCTIFYNRFQSVISQVPTARQLIPAVFESGSAAGAQYEYEPEEEAILAELLPRGVATQIFTALLENGASEQGARMSAMDNATRNAGEMIGKLTITYNRSRQQAITSELIEIISGAEAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD0</accession>
    <name>A0A2M9PCD0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000569">
        <property type="protein sequence ID" value="PJN95178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013573">
        <property type="entry name" value="Tscrpt_reg_YcdC_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08362">
        <property type="entry name" value="TetR_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TetR_C_3" evidence="1">
        <location>
            <begin position="12"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8394" checksum="2C9008C463AF5911" modified="2018-04-25" version="1" fragment="single">LVDEGAAIRACGVAAGRIAPVDPHHLIFSIWAVTQHYADFDAQVRAVLGVDDAGRFDDAARFLDHLFARALAPDQPGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG3</accession>
    <name>A0A2M9PCG3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Phosphopantetheine adenylyltransferase</fullName>
            <ecNumber evidence="6">2.7.7.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Dephospho-CoA pyrophosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Pantetheine-phosphate adenylyltransferase</fullName>
            <shortName evidence="6">PPAT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">coaD</name>
        <name evidence="8" type="ORF">CNY89_09705</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5 6">
            <text>(R)-4'-phosphopantetheine + ATP + H(+) = 3'-dephospho-CoA + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:19801"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57328"/>
            <dbReference type="ChEBI" id="CHEBI:61723"/>
            <dbReference type="EC" id="2.7.7.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="6">Cofactor biosynthesis; coenzyme A biosynthesis; CoA from (R)-pantothenate: step 4/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the bacterial CoaD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.3" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000542">
        <property type="protein sequence ID" value="PJN95229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00241">
        <property type="reaction ID" value="UER00355"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004595">
        <property type="term" value="F:pantetheine-phosphate adenylyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015937">
        <property type="term" value="P:coenzyme A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd02163">
        <property type="entry name" value="PPAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00151">
        <property type="entry name" value="PPAT_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004821">
        <property type="entry name" value="Cyt_trans-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001980">
        <property type="entry name" value="PPAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21342:SF1">
        <property type="entry name" value="PTHR21342:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01467">
        <property type="entry name" value="CTP_transf_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01020">
        <property type="entry name" value="LPSBIOSNTHSS"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01510">
        <property type="entry name" value="coaD_prev_kdtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00125">
        <property type="entry name" value="cyt_tran_rel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0173">Coenzyme A biosynthesis</keyword>
    <keyword evidence="1 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2 6 8" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CTP_transf_like" evidence="7">
        <location>
            <begin position="5"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="9"/>
            <end position="10"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="9"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="93"/>
            <end position="95"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="128"/>
            <end position="134"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Transition state stabilizer" evidence="6">
        <location>
            <position position="17"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022993"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029346"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18121" checksum="8DF2ED0B2D10EF13" modified="2018-04-25" version="1">MRIGLYPGTFDPVTLGHIDIIRRACSLVDRLVIGIAINRDKAPMFDLEARVAMVEAETKPIAEAAGIQIVAHPFENLLIHCAQDVNAGMIIRGLRAVSDFEYEFQMVGMNRALDASVETVFLMADAHHQAIASRLVKEIARLGGDVSRFVPPRVVAALAAKFSVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD44</accession>
    <name>A0A2M9PD44_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Type II secretion system protein J</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_08390</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GSP J family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000444">
        <property type="protein sequence ID" value="PJN95456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015627">
        <property type="term" value="C:type II protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015628">
        <property type="term" value="P:protein secretion by the type II secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012902">
        <property type="entry name" value="N_methyl_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045584">
        <property type="entry name" value="Pilin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010055">
        <property type="entry name" value="T2SS_protein-GspJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07963">
        <property type="entry name" value="N_methyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11612">
        <property type="entry name" value="T2SSJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54523">
        <property type="entry name" value="SSF54523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00409">
        <property type="entry name" value="PROKAR_NTER_METHYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8 10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00021539"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="19882" checksum="1A94270B15785081" modified="2018-04-25" version="1">MTPPPGTARERGPEAGVTLVEVLVGLVLFALIGLAGFTVLDQVIRVQARTDGRLDRLAEIQRTAHLVKLDLMQASRGSLSLIDGAVSFRRDSGAGEIAVRYGLEDGALVRSVSGGNGANERQRLLSGVEAIRWDFLDPQGVWVGDWPAAATRAAQDNPVAVSLDLALAGLGLSGELRRLVRLPAEADP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD49</accession>
    <name>A0A2M9PD49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000449">
        <property type="protein sequence ID" value="PJN95442.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019734">
        <property type="entry name" value="TPR_repeat"/>
    </dbReference>
    <dbReference type="SMART" id="SM00028">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50005">
        <property type="entry name" value="TPR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0802">TPR repeat</keyword>
    <feature type="repeat" description="TPR" evidence="1">
        <location>
            <begin position="60"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95442.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="16203" checksum="5760507BB9B3B241" modified="2018-04-25" version="1" fragment="single">EPGRADADRIEADIQRLWSQSGSPAMDLLLRRAQDAIAAQDLNAALDHLNAAIDHDPGFAEAWNLRGSVFYLLNEYALALNDIEHVLALEPRHFGAMEGLAIIFVETEHPDLALRVVERARAVNPNRESLKETEARLERDLGASDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD69</accession>
    <name>A0A2M9PD69_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">5_nucleotid_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08355</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the 5'-nucleotidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000441">
        <property type="protein sequence ID" value="PJN95462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0110165">
        <property type="term" value="C:cellular anatomical entity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016791">
        <property type="term" value="F:phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009166">
        <property type="term" value="P:nucleotide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008334">
        <property type="entry name" value="5'-Nucleotdase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036907">
        <property type="entry name" value="5'-Nucleotdase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006146">
        <property type="entry name" value="5'-Nucleotdase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006179">
        <property type="entry name" value="5_nucleotidase/apyrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11575">
        <property type="entry name" value="PTHR11575"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02872">
        <property type="entry name" value="5_nucleotid_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01607">
        <property type="entry name" value="APYRASEFAMLY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55816">
        <property type="entry name" value="SSF55816"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00786">
        <property type="entry name" value="5_NUCLEOTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="5_nucleotid_C" evidence="3">
        <location>
            <begin position="230"/>
            <end position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006654"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU362119"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02872"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="428" mass="44984" checksum="00E1F09D6BDC2167" modified="2018-04-25" version="1">MNAMGFDAMALGNHEFDLGPEPLAKFVEKAEFPIVFGNVDASTDPRLGPLQKTGPLTLEVGGEKVGIVALTTTETPEIASPGPTVVFKDELATLNAQVAELQAQGVKYIIALTHLGDVADVALAAAAAPGIDAIVGGHSHTLFSNTVEGAAHPYPLMVEGQGGVKIPVVQAGEYSKYLGDLRLVFDDEGVVTEATGDVRLLDASVVPDAAMTTRIQELAKPIEELKNRVVAEVGAGIDGSRETCRAVECQMGNLVSDAMLDRVKGQGVTIALQNGGGLRASIDAGAVTQGEILTVLPFQNTLATFNLTGEGVIAALENGVSQVEEGAGRFLQVAGLTYAWDPKAAPGDRIREVMVQEGEVWMPIDPAKTYALVTNDFIRRGGDGFAVLRDQATNAYDFGPGLENVLADYLAAHPGYMPYTDGRISQVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD79</accession>
    <name>A0A2M9PD79_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Deoxyguanosinetriphosphate triphosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000435">
        <property type="protein sequence ID" value="PJN95478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016793">
        <property type="term" value="F:triphosphoric monoester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006261">
        <property type="entry name" value="dNTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006675">
        <property type="entry name" value="HDIG_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01966">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01353">
        <property type="entry name" value="dGTP_triPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00277">
        <property type="entry name" value="HDIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="1">
        <location>
            <begin position="62"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="26443" checksum="FBAEB19E674F02F1" modified="2018-04-25" version="1" fragment="single">MTAVYATRPEDSRGRLFAEEGSTHRSPFQRDRDRIIHSSAFRRLKHKTQVFVEHEGDYYRTRLTHSIEVAQVARTLARVLGLNEELAEAVALAHDLGHPPFGHTGEDELERMMAPYGGFDHNAQALTIITRLEAHYAEFDGLNLTWETLEGIAKHNGPVTAPIHYALAEYVAIHDLELDTCASAEAQVAAISDDIAYNNHDLADGLRAGLFTLDDLALLPLIGPCVAEVDRRWPGLAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD83</accession>
    <name>A0A2M9PD83_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Nitrate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000426">
        <property type="protein sequence ID" value="PJN95499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7094" checksum="ED03495D4F9B1F62" modified="2018-04-25" version="1" fragment="single">GLRAAARSSFRTDLFRNVLGPIGADLPGASEKLEGAMPTRTAVASTLGRLQLGPDSFFDGAVFDPSAGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD92</accession>
    <name>A0A2M9PD92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000419">
        <property type="protein sequence ID" value="PJN95515.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005090">
        <property type="entry name" value="Rep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03428">
        <property type="entry name" value="RP-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95515.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="384" mass="41697" checksum="7B525969168FFE7A" modified="2018-04-25" version="1">MQVEQSSEPELTQGKLHRLLRLAAAAHGLPDAVLVTAHALLRYVPRDAVEPISPARVQDLAEERGCDPRTIRAHVRRLEAHGLVVDRSAGGGRRMIQRRRGRLVVLQGVDFSPMLAAADAFAIAAIEAEAERDERRRLAARVSALKRHLRNVIADQEEGGVADRAASALRACPARHRGLSLRELAALAARLDVAVRLLNSIEDSAGSRIFLSDRSDEKIRHNTTEKDENLVCRAQVADRPVAADRLELVSLAKLLPALPFDWRVRVERDGPVTWPNLIGTACERGGEIDVTKAIWAEAQSALGPEGAAVLVLLADADSVDRGGSIRCPAAWVRAMVVRAGIEPLCLSQNLLRLRRREQDAGDGASCPTGFNSSQPILRGPCPAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA4</accession>
    <name>A0A2M9PDA4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_07970</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000414">
        <property type="protein sequence ID" value="PJN95527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="4">
        <location>
            <begin position="7"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="5">
        <location>
            <begin position="132"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="3">
        <location>
            <begin position="132"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="27029" checksum="1464AB410EE5F815" modified="2018-04-25" version="1">MATARPLVLVLEDDSDLASALVRTFREHGFDAGSAGLVRDFERRLSQVRPAICVIDMNLPDGAGLDVIGRRLKSEAIPAILMSGVWTEVSYRVLGLEMGADDYLLKPVDPREMVARVRAVLRRSEGAAQDDDRFAHFGGWTADFRGHRLIAPDASEVELSASEVRLLRALASRPQRVQTRETLMEDDEAAGTLPFDRSIDVRISRLRAKLREDPRNPRIIKTIYGAGYMFAPKVEWSRGAER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD0</accession>
    <name>A0A2M9PDD0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000399">
        <property type="protein sequence ID" value="PJN95557.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95557.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16954" checksum="A24B07E1505F206E" modified="2018-04-25" version="1">MQPTMGSETMKAIGYRTPGPIDRAEALEDAALGLGAPAFVFSTNESHRHVEDIVELIAPQGRFGLIDDPVGLDVMAFKRKSVSIHWELKFTRAIFGTPDMDAQGRLLAEIARLVDSGRIRTTLTETRSPIDAATLRQAHALIETGKARGKIVIAGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS2</accession>
    <name>A0A2M9PDS2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ATP synthase F1 subunit delta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">atpH</name>
        <name evidence="7" type="ORF">CNY89_06950</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000341">
        <property type="protein sequence ID" value="PJN95700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01416">
        <property type="entry name" value="ATP_synth_delta_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026015">
        <property type="entry name" value="ATP_synth_OSCP/delta_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020781">
        <property type="entry name" value="ATPase_OSCP/d_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000711">
        <property type="entry name" value="ATPase_OSCP/dsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11910">
        <property type="entry name" value="PTHR11910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00213">
        <property type="entry name" value="OSCP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00125">
        <property type="entry name" value="ATPASEDELTA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47928">
        <property type="entry name" value="SSF47928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01145">
        <property type="entry name" value="ATP_synt_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00389">
        <property type="entry name" value="ATPASE_DELTA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="5" id="KW-0139">CF(1)</keyword>
    <keyword evidence="2" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="3" id="KW-0406">Ion transport</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13537" checksum="CF12F56F73909EB6" modified="2018-04-25" version="1" fragment="single">QDTVNAVRAIADRMGLGLEVKNTLALMASNRRLFILPAVIARVRAMIAADRGEVSAEVVAAKPLTDAQTADLREKLRASVGKDVELKVTVDESLIGGLVVRIGSRMIDTSIRSKLAKLQNVMKEVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT6</accession>
    <name>A0A2M9PDT6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000335">
        <property type="protein sequence ID" value="PJN95715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016035">
        <property type="entry name" value="Acyl_Trfase/lysoPLipase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52151">
        <property type="entry name" value="SSF52151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="27667" checksum="A0850D00C9BC66D4" modified="2018-04-25" version="1">MVGDIAMDDPVIRTLLAIVMKRLDTGSPWIVSNLPGAPFWDAPADGSFHGNRGYRLARLLMASTAAPTFFQQQEIEIGPGESGVFVDGGASPHNDPSLALLMLARLKVFGLEWPTGPERLSILSIGTGHHRRRTDAARLAASGPVTVAYNALMGVIADNEALVQALMQGLGSSRLPVWLNAELGAVADGGLVGAPILDYLRLDMPIDEETVASLDTNRKAPSIGRLRGITDPQIIRPLYDMARTYCARRYDLSELLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE06</accession>
    <name>A0A2M9PE06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ETC complex I subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_06730</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000325">
        <property type="protein sequence ID" value="PJN95738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022900">
        <property type="term" value="P:electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006885">
        <property type="entry name" value="NADH_UbQ_FeS_4_mit"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038532">
        <property type="entry name" value="NDUFS4-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12219">
        <property type="entry name" value="PTHR12219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04800">
        <property type="entry name" value="ETC_C1_NDUFA4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="4" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="5" id="KW-0809">Transit peptide</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="75"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="9">
        <location>
            <begin position="89"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11910" checksum="36E13DE569C5EF0C" modified="2018-04-25" version="1">MFAKIYKPARNAMQSGQAKTHEWILEFVPDTAKTLDPLMGWTGSGDTKHQVQLRFESRESAEAYAESHGIPYRAFEPQPRRPILRTNGYGDNFSFQRRAPWTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE28</accession>
    <name>A0A2M9PE28_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000302">
        <property type="protein sequence ID" value="PJN95799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="16373" checksum="9C30645A36DACC1C" modified="2018-04-25" version="1">MLGTDADEVFDFSTFASVVDLAAIRSGGGADTIIGSSAGEIIEGGSGADVIDPRGGTDTVTGGTGNDTFRFVDGVAYGSNTITDFDASGNDAIRLVGFDYGVANPDALTNSQRVGFVREATSLVGGVATIDLDALGGSGEIRLANVTALGQLSFSIEDFLFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE84</accession>
    <name>A0A2M9PE84_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Ferric uptake regulation protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fur</name>
        <name evidence="6" type="ORF">CNY89_06175</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 5">Belongs to the Fur family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000289">
        <property type="protein sequence ID" value="PJN95833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07153">
        <property type="entry name" value="Fur_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002481">
        <property type="entry name" value="FUR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043135">
        <property type="entry name" value="Fur_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33202">
        <property type="entry name" value="PTHR33202"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01475">
        <property type="entry name" value="FUR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0678">Repressor</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="5" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="4 5" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00020910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="16168" checksum="81C29B04B31EADD8" modified="2018-04-25" version="1">MEIARKAIDYEGVLRDAGLRITKPRRIILEILHRSEGHPDATQIFEQAAAMDSRISLATVYRTMKALEESGAIQRHAFGHGPARFEQAHVAHHDHLIDVDTGEVVEFTSDRIEAIQQEIAARLGYEIVHHRLELYGRRIKGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG7</accession>
    <name>A0A2M9PEG7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Biopolymer transporter ExbB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05865</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000271">
        <property type="protein sequence ID" value="PJN95884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="138"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="192"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="320" mass="34826" checksum="487059551FA89B05" modified="2018-04-25" version="1" fragment="single">MTPDRRIEPQFSQPVRQIVMMLIVLGFAVAVGILLYPTVSGVFLSSPYLNSFIILVFLIGVGACVWQVLALIASVSWIERFAQERPGREAARTPTMLAPLASLLSERRSRQALSSSSTRSILDSVATRIEEQRDLTRYLINLLIFLGLLGTFYGLATVVPAVVDTIRSLAPQEGESAVTVFDNLMSGLEGQLAGMGTAFASSLLGLSGSLLVGLLDLFSSHGQNRFYRELEEWLSSFTKLGVMGVDADEPLTGATLLGVIEQNALQIDALRDVVERATARAEETDKRIEALAGLIASPERIEETRRMQERLVGAQEKVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN0</accession>
    <name>A0A2M9PEN0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05115</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000228">
        <property type="protein sequence ID" value="PJN96007.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020449">
        <property type="entry name" value="Tscrpt_reg_HTH_AraC-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00032">
        <property type="entry name" value="HTHARAC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="12"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96007.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12602" checksum="19ED5AE7DDAA422F" modified="2018-04-25" version="1">MACSGKASRADPAQVRALAAELALTGPLTVGRIADRLGTSSRTLQRHLADQGVSLRAIVEQSRLEIARVLLCKTDLDVQEIAARTGYSTPSGFARAFARWAGSPPRKYRKASGRPGLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET2</accession>
    <name>A0A2M9PET2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pyrimidine 5'-nucleotidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000215">
        <property type="protein sequence ID" value="PJN96041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006439">
        <property type="entry name" value="HAD-SF_hydro_IA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041492">
        <property type="entry name" value="HAD_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010237">
        <property type="entry name" value="Pyr-5-nucltdase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13419">
        <property type="entry name" value="HAD_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01132">
        <property type="entry name" value="C1.5.3:_5'-Nucleotidase_Like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01509">
        <property type="entry name" value="HAD-SF-IA-v3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01993">
        <property type="entry name" value="Pyr-5-nucltdase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="23276" checksum="60C4D1C05BB1514E" modified="2018-04-25" version="1">MPRNAFSHVETWVFDLDDTLYRPEVRLFDQIEARMNAWVMESLGLDLPRATRLRRHYWELYGTTLAGLMAEHGTEPDAYLAAVHDIDLSAVAPDPDLAAAVAALPGRKIVFTNGSRAHARNVTAALGLGGVFDALYGFEDAGYTPKPREEAFARVFATDGLAPARAAMFEDAARNLAVPHGLGMRTVLVGTAVEPAAHVHHVTDDLVGFLARLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU1</accession>
    <name>A0A2M9PEU1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Holliday junction branch migration DNA helicase RuvB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000229">
        <property type="protein sequence ID" value="PJN96004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009378">
        <property type="term" value="F:four-way junction helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004605">
        <property type="entry name" value="DNA_helicase_Holl-junc_RuvB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008823">
        <property type="entry name" value="RuvB_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42848">
        <property type="entry name" value="PTHR42848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05491">
        <property type="entry name" value="RuvB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuvB_C" evidence="1">
        <location>
            <begin position="19"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11222" checksum="D83A877843981E44" modified="2018-04-25" version="1" fragment="single">KVTQPVADKALTRLGVDHIGLDGADRRYLLLLAENYGGGPVGVETIAAALSEARDAIEEVIEPFLLQQGLIQRTPRGRLLASRAWTHLGLNAPRPASPIGDLFDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV2</accession>
    <name>A0A2M9PEV2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6">Superoxide dismutase</fullName>
            <ecNumber evidence="2 6">1.15.1.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_04765</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Destroys radicals which are normally produced within the cells and which are toxic to biological systems.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>2 H(+) + 2 superoxide = H2O2 + O2</text>
            <dbReference type="Rhea" id="RHEA:20696"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:16240"/>
            <dbReference type="ChEBI" id="CHEBI:18421"/>
            <dbReference type="EC" id="1.15.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the iron/manganese superoxide dismutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.15.1.1" evidence="2 6"/>
    <dbReference type="EMBL" id="PHNO01000208">
        <property type="protein sequence ID" value="PJN96063.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004784">
        <property type="term" value="F:superoxide dismutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.55.40.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001189">
        <property type="entry name" value="Mn/Fe_SOD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019833">
        <property type="entry name" value="Mn/Fe_SOD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019832">
        <property type="entry name" value="Mn/Fe_SOD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019831">
        <property type="entry name" value="Mn/Fe_SOD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036324">
        <property type="entry name" value="Mn/Fe_SOD_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036314">
        <property type="entry name" value="SOD_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02777">
        <property type="entry name" value="Sod_Fe_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00081">
        <property type="entry name" value="Sod_Fe_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000349">
        <property type="entry name" value="SODismutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01703">
        <property type="entry name" value="MNSODISMTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46609">
        <property type="entry name" value="SSF46609"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54719">
        <property type="entry name" value="SSF54719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00088">
        <property type="entry name" value="SOD_MN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sod_Fe_N" evidence="7">
        <location>
            <begin position="3"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="domain" description="Sod_Fe_C" evidence="8">
        <location>
            <begin position="99"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="28"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000349-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000414"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96063.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="22150" checksum="6BB8E2F691351B63" modified="2018-04-25" version="1">MAFELPPLPYAHDALAESGMSKETLEFHHDIHHKAYVDNGNKLIAGTEWEGKSLEEIVKGTYKSGAVAQSGIFNNASQHWNHNQFWTWLSPKPVAMPSELEKALTESFGSVDKFKEEFAAAGAGQFGSGWAWLVKDADGSLKVTKTENGVNPLCFGQTALIGVDVWEHSYYIDFRNKRPAYLTNFLDKLANWEEAAAKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV6</accession>
    <name>A0A2M9PEV6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000210">
        <property type="protein sequence ID" value="PJN96058.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96058.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9254" checksum="E5632887C66B5C12" modified="2018-04-25" version="1">MELCYHRAPLGNFGDDLNAWLWDELSPGWRDWAADRVLVGVGTLLNTDLERRVGPGRRFLVAASSLWDGRSLRWRRLSTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF62</accession>
    <name>A0A2M9PF62_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 13">Dihydrolipoyl dehydrogenase</fullName>
            <ecNumber evidence="3 13">1.8.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">lpdA</name>
        <name evidence="16" type="ORF">CNY89_04230</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-lipoyl-L-lysyl-[protein] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:15045"/>
            <dbReference type="Rhea" id="RHEA-COMP:10474"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="1.8.1.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11 13">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="11 13">Binds 1 FAD per subunit.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="13">The active site is a redox-active disulfide bond.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 13">Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.8.1.4" evidence="3 13"/>
    <dbReference type="EMBL" id="PHNO01000181">
        <property type="protein sequence ID" value="PJN96152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004148">
        <property type="term" value="F:dihydrolipoyl dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045454">
        <property type="term" value="P:cell redox homeostasis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006258">
        <property type="entry name" value="Lipoamide_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001100">
        <property type="entry name" value="Pyr_nuc-diS_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004099">
        <property type="entry name" value="Pyr_nucl-diS_OxRdtase_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012999">
        <property type="entry name" value="Pyr_OxRdtase_I_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02852">
        <property type="entry name" value="Pyr_redox_dim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000350">
        <property type="entry name" value="Mercury_reductase_MerA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55424">
        <property type="entry name" value="SSF55424"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01350">
        <property type="entry name" value="lipoamide_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00076">
        <property type="entry name" value="PYRIDINE_REDOX_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5 11 13" id="KW-0274">FAD</keyword>
    <keyword evidence="4 13" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 11 13" id="KW-0520">NAD</keyword>
    <keyword evidence="11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="9 13" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="15">
        <location>
            <begin position="4"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="domain" description="Pyr_redox_dim" evidence="14">
        <location>
            <begin position="343"/>
            <end position="452"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="441"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="176"/>
            <end position="183"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="268"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="309"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <begin position="315"/>
            <end position="318"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="disulfide bond" description="Redox-active" evidence="12">
        <location>
            <begin position="42"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000350-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02852"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN96152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="478" mass="50842" checksum="1A5942E95C55030E" modified="2018-04-25" version="1">MADYDLIVIGAGPGGYVCAIRAAQLGLKTACVEGRATLGGTCLNIGCIPSKAMLHASELYHEAHENFAKMGIMGEAPTIDVARLQDYKQSVVDGNTKGIEFLFKKNKIDWLKGWASIPAPGQVKVGEETHRARHIVVASGSVPSTLPGVEVDEETVVTSTGALVLPSVPKTMTVIGAGVIGLELGSVYARLGTEVTVVEYLDQITPGMDLEICKTLQKVLTKQGLKFVLGAAVQGVEPSESGREVVYKLRKDDSEHRLKSDVVLVATGRKPYTDGLGLEALGVQMSKRGQIEIDAHWRTSVPGIYAIGDAVSGPMLAHKAEDEGMAAAEVIAGRHGHVNYDVIPGVIYTTPEVASVGETEETLKEKGRAYKVGKFPFMGNARAKALMQAEGFVKILADKETDRILGAHIIGPQAGELIHEICVAMEFGASAEDVARTCHAHPTCSEAVREAAHRRVEAAAARKSPRKLPAQGNARICA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF90</accession>
    <name>A0A2M9PF90_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04240</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000181">
        <property type="protein sequence ID" value="PJN96154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023352">
        <property type="entry name" value="MAPEG-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001129">
        <property type="entry name" value="Membr-assoc_MAPEG"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01124">
        <property type="entry name" value="MAPEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161084">
        <property type="entry name" value="SSF161084"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="62"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="111"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="133" mass="14019" checksum="B259F7FDA8DE62C4" modified="2018-04-25" version="1">MTPELTVLALAVFLQVAQIGLAGAAMNRDVGLEWNASPRDTQPAFSPLTGRLRRAVNNHFEALTFFTIAVVVVTLSGAAGGFTAACAWVYLGARIFYVPAYAYGWAPWRSAIFGVGLTATLLMLLAALVGSGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF93</accession>
    <name>A0A2M9PF93_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000164">
        <property type="protein sequence ID" value="PJN96213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="16230" checksum="B41ADB5726E8BAF3" modified="2018-04-25" version="1" fragment="single">DNVLVFPSPVDLDFRIVDWEMADCGDAGWDVGAVLQSFLSTWISSMPIASGLPPTAYIGMASQPLEAMRPVLKAFWQSYASTRGFDVAQSRSELDRCMRFGAARLVWSAIEQRLHVTELDATANALLQVSLNVLKDPSRAVRELLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF95</accession>
    <name>A0A2M9PF95_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NADH-quinone oxidoreductase subunit A</fullName>
            <ecNumber evidence="6">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">NADH dehydrogenase I subunit A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">NDH-1 subunit A</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">NUO1</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nuoA</name>
        <name evidence="8" type="ORF">CNY89_03935</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 7">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6 7">Cell membrane</location>
            <topology evidence="6 7">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the complex I subunit 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000167">
        <property type="protein sequence ID" value="PJN96201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01394">
        <property type="entry name" value="NDH1_NuoA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023043">
        <property type="entry name" value="NAD(P)H_OxRDtase_bac/plastid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000440">
        <property type="entry name" value="NADH_UbQ/plastoQ_OxRdtase_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038430">
        <property type="entry name" value="NDAH_ubi_oxred_su3_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11058">
        <property type="entry name" value="PTHR11058"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00507">
        <property type="entry name" value="Oxidored_q4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6 7" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 7" id="KW-0874">Quinone</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="3 6 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <keyword evidence="6" id="KW-0830">Ubiquinone</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="63"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="93"/>
            <end position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13733" checksum="71A3D785014C553C" modified="2018-04-25" version="1">MEELLREYLPILIFLGLAIALGLVLLLAAAVVAISNPDAEKISAYECGFNAFDDARMKFDVRFYLVSILFIIFDLEVAFLFPWAVAFQHIGPFGFWSMIVFLAVLTIGFAYEWKKGALEWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB6</accession>
    <name>A0A2M9PFB6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alanine racemase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000163">
        <property type="protein sequence ID" value="PJN96219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001608">
        <property type="entry name" value="Ala_racemase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01168">
        <property type="entry name" value="Ala_racemase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ala_racemase_N" evidence="2">
        <location>
            <begin position="34"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="200"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="273"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="29284" checksum="0E1457BEC8969322" modified="2018-04-25" version="1" fragment="single">MNAPAKITELEVGYDVPAVPGMAYEDIQTPCLILDLDALERNVKKLGDYAKAHGMRHRAHGKMHKSVDVLKLQMELGGAIGVCCQKVSEAEVFARAGIKDILVSNQVRDPAKIDRLARMPKISGGRVIVCVDDVANVADLSAAAQKHGTTIECFVEIDCGAGRCGVKTAAAVVEIAKAIDAAPGLKFTGIQAYQGAMQHMDKFEDRKAKLDAAIAQVTEAVEALKAEGLECELVSGGGTGSYYFESESKVYNELQCGSYAFMDADYGRIHDKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD3</accession>
    <name>A0A2M9PFD3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">N-acetylglucosamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_03670</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000153">
        <property type="protein sequence ID" value="PJN96253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="3" id="KW-0288">FMN</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="4">
        <location>
            <begin position="19"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="5">
        <location>
            <begin position="171"/>
            <end position="308"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="421" mass="45212" checksum="7B9A89C9DE4B3EBC" modified="2018-04-25" version="1" fragment="single">GRRARPRIRDNQPAARAETILLVGSELGSTWGFAATLHAALTEAGQSVHTAPMSTFAPNRYVRANRIVVLASTYGDGDAPTSAKGFLDRLEALDQAPDAAVAVLGFGDRSFPAYCAFAGAVAAAAEAKGWPELLPFETIDRQSPQDFARWGRALGRALGIELELAHQPVLPVTEKLTLVSRRDYGVEVQAPTAILRFAMPRATIWQRLTGRGFARFAAGDLLGIVPEGSAVPRFYSLASGDRDGFIEIVVKKHLGGLCSGQLTTLEPGDHVSAFLRRNPGFRAGQDRAPLILIGAGTGIGPLAGFVRANARRRPVHLFFGMRHLDSDFLYGEEFSIWQTAGRLQRLVTAVSRGARPHYVQDALRAEGEEVARLVRNGARVMVCGGRDMAAGVAHALADILAPVGLTLVGLKAEGRYVEDVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG1</accession>
    <name>A0A2M9PFG1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Histidinol-phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000142">
        <property type="protein sequence ID" value="PJN96286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8497" checksum="C2B3E5F33DC26B7C" modified="2018-04-25" version="1" fragment="single">MPELAPELRREFWKVAEELADAAGARCLPLFRSEDLRTENKVSEGFDPVTAADRAAEAAMREILARRRPQDGVLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP3</accession>
    <name>A0A2M9PFP3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ABC transmembrane type-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03115</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000125">
        <property type="protein sequence ID" value="PJN96342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="17"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="91"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="192"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="15"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="228" mass="24860" checksum="63F7D79D2003A611" modified="2018-04-25" version="1">MENVVSYLPLLLAGLKITLLLALTTVVVGLCLGMLLALAKLSPRPWLSRPVFALTNFLRGIPEFLILLVVFYGGAQVLSDMAGEGGTPLNISPFGAGVFALSIVFGSYASETFRAAFLSVPKGQVEAGLAYGFSPLQIFRYVQLPQIWRVALPGIANLWQGLVKDTALVSIVGLDDLMRKTNQAAQTTREPFTFYLVAALIFLAVTLLSMAFFAWMERRSSRGVRRAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT5</accession>
    <name>A0A2M9PFT5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000110">
        <property type="protein sequence ID" value="PJN96388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014825462" evidence="1">
        <location>
            <begin position="24"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7866" checksum="2AE9F1814CB76D28" modified="2018-04-25" version="1" fragment="single">MRYLPLLPLAPIAAALVISACSADGGFVKPSEMTPQERCDNAALALALVEANMPEGSATVERARVNFALICGAPLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG76</accession>
    <name>A0A2M9PG76_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF2312 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01855</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000068">
        <property type="protein sequence ID" value="PJN96548.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046367">
        <property type="entry name" value="GapR-like_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10073">
        <property type="entry name" value="DUF2312"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2312" evidence="2">
        <location>
            <begin position="17"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="20"/>
            <end position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96548.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="10261" checksum="A02C68A8B60EE635" modified="2018-04-25" version="1">MEDIIEDEQTVQFKVTAAELRSFVERYERLEAEKKDIADQQKEVMAEAKGRGYDVRVIKKLVALRKREPSDVSEEEAILQLYREALGM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE5</accession>
    <name>A0A2M9PGE5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GSCFA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01580</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000057">
        <property type="protein sequence ID" value="PJN96601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014982">
        <property type="entry name" value="GSCFA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08885">
        <property type="entry name" value="GSCFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GSCFA" evidence="2">
        <location>
            <begin position="43"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="317"/>
            <end position="381"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="392" mass="43194" checksum="ACE50385AFDBF714" modified="2018-04-25" version="1">MNAPSPYAGLNPRAYWRSGVAERADGDPGDLYQPRFPVTREMRIMTAGSCFAQHVGRALRRSGFNVIDAERLGRHIPDAVAERFGYRQYSARYGNLYTSRQLRQLLAEALGGRIPALPVWRRGDRFFDAQRPGVEPDGLDSEASVLAHRAAHLGCVRGAVRQADLFVFTFGLTEAWIHGETGTVYPTAPGTIAGEFDPEVFAFRNFDVTEVMADFEAARQRLKRINPEMRFLVTVSPVPLTATATGRHVEVATCYSKAVLRAACGMLTEKHEDVDYFPSFEIITSQTAGGRHYEDNLRNVTAEGVATAMGLFLGAHGVETQGEPTPGIAPAGTGRRRRPRRRQSQAHGVETQGEPTPGIAPAGTGRRRRPRRRQSQAEEVACEEALLEAFSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL6</accession>
    <name>A0A2M9PGL6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage major capsid protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024455">
        <property type="entry name" value="Phage_capsid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05065">
        <property type="entry name" value="Phage_capsid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01554">
        <property type="entry name" value="major_cap_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="380" mass="40715" checksum="71F24275D7530980" modified="2018-04-25" version="1">MRHQTFEMKTAEGGDGDPVESVTKALGDLTKTVEDRFKAIEAKGDPAAPLADRLDKIEARMNRLGAAKSEDAPKAELKAFGSYLRLGNNAPLDDLKTLTVSSDPQGGYLAPAEMSTEFIRDLVEMSPIRSVASVRSTGSPSVIYPRRTGITNAKWKGETQAQEGSEPAFGQSEIVVKEVNTYVDISNQLLADSAGQAEAEVRLALAEDFGKKEGAAFVNGDGVLEPEGFMTAAGIGETVNGHATILSADALIALLYAMPATYRNAGAWAMNGTTLAAYRTIKDGQGNYLWQPSYQLGQPETILGRPVVEMLDMPEAASGTFPVIYGDWSGYRIVDRIGLSILVNPYLLATNGLTRIHATRRVGGGVLQPAKFRKLKMAVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ4</accession>
    <name>A0A2M9PGQ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Alpha-glucoside ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00950</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000032">
        <property type="protein sequence ID" value="PJN96711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="178"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="207"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="248"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="289"/>
            <end position="314"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="350"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="172"/>
            <end position="369"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="383" mass="41578" checksum="1E9B86E8D399B759" modified="2018-04-25" version="1">MQSSSEGVVGQKAALTWVVHISVLLLVALWTLPTFGLFVSSLRDKDQLAVSGWWTALSSSEQNLTGRTGDPATAVQRDGVWVVEGNLFEGSGTITRFGWRPNQPTAFEAGQTAEMNDGETLTVQADGAYAWTSTAQPEGRGQRVFYTASQPPRFTLDNYREVISAEGLSRSFMNSLTVAIPATAIPILIAAFAAYALAWMEFPFRGLLLAVVVGLLVVPLQMSLIPLLKLYAGVGAFFGVPAKTYLGIWLAHTAFGLPLAIYLLYNYMAGLPKDLIESARVDGASDFEIFTKIILPLSFPALASFSIFQFLWVWNDLLVALVFLGAQDEKLVLTARLVNLLGSRGGNWEILTASAFITIIVPLGVFFALQRYLVRGLLAGSVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX2</accession>
    <name>A0A2M9PGX2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">3-oxoacyl-[acyl-carrier-protein] synthase 2</fullName>
            <ecNumber evidence="3 10">2.3.1.179</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="primary">fabF</name>
        <name evidence="14" type="ORF">CNY89_00510</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Involved in the type II fatty acid elongation cycle. Catalyzes the elongation of a wide range of acyl-ACP by the addition of two carbons from malonyl-ACP to an acyl acceptor. Can efficiently catalyze the conversion of palmitoleoyl-ACP (cis-hexadec-9-enoyl-ACP) to cis-vaccenoyl-ACP (cis-octadec-11-enoyl-ACP), an essential step in the thermal regulation of fatty acid composition.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>(9Z)-hexadecenoyl-[ACP] + H(+) + malonyl-[ACP] = 3-oxo-(11Z)-octadecenoyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:55040"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10800"/>
            <dbReference type="Rhea" id="RHEA-COMP:14074"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:83989"/>
            <dbReference type="ChEBI" id="CHEBI:138538"/>
            <dbReference type="EC" id="2.3.1.179"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>a fatty acyl-[ACP] + H(+) + malonyl-[ACP] = a 3-oxoacyl-[ACP] + CO2 + holo-[ACP]</text>
            <dbReference type="Rhea" id="RHEA:22836"/>
            <dbReference type="Rhea" id="RHEA-COMP:9623"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9916"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78449"/>
            <dbReference type="ChEBI" id="CHEBI:78776"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 10 12">Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.179" evidence="3 10"/>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004315">
        <property type="term" value="F:3-oxoacyl-[acyl-carrier-protein] synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00834">
        <property type="entry name" value="KAS_I_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017568">
        <property type="entry name" value="3-oxoacyl-ACP_synth-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000794">
        <property type="entry name" value="Beta-ketoacyl_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018201">
        <property type="entry name" value="Ketoacyl_synth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014031">
        <property type="entry name" value="Ketoacyl_synth_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014030">
        <property type="entry name" value="Ketoacyl_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020841">
        <property type="entry name" value="PKS_Beta-ketoAc_synthase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11712">
        <property type="entry name" value="PTHR11712"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00109">
        <property type="entry name" value="ketoacyl-synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02801">
        <property type="entry name" value="Ketoacyl-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000447">
        <property type="entry name" value="KAS_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00825">
        <property type="entry name" value="PKS_KS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03150">
        <property type="entry name" value="fabF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00606">
        <property type="entry name" value="B_KETOACYL_SYNTHASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 10" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8 10" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5 10" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PKS_KS" evidence="13">
        <location>
            <begin position="4"/>
            <end position="420"/>
        </location>
    </feature>
    <feature type="active site" evidence="11">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR000447"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000447-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU003694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM00825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN96786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="420" mass="43774" checksum="85A536425AA55B73" modified="2018-04-25" version="1">MRRVVITGMGLVTPLACGVEASWTRLIEGRSGAGPITRFDASALPTRIACEVPIGDGSDGTFNPDDWMAPKDQRKVDRFILLAMAAAQQAVEDAGWTPEAEEDRLRTGVMIGSGIGGLENIAATAVTLRDKGPRRVSPFFIPGSLINLCSGHVSIRYGFKGPNHSVVTACSTGAHAIGDAMRMIKWGDADVMVAGGAEAAVCEIGIAGFNACKALSTDFNDEPTRASRPYDKARDGFVMGEGAGVVVLEELEHARARGAKIYAEVVGYGMSGDAYHITSPAPDGDGGFRSMRAALQNAGLDPADVDYVNAHGTSTPLGDEIELGAVTRLLGNHAGETAMSSTKSAIGHLLGAAGAVEAIFSTLAIRDNVAPPTLNLENPSVETPLDLVPLAAQPRRIDVALSNSFGFGGTNASLVLKRFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH39</accession>
    <name>A0A2M9PH39_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Trk system potassium uptake protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_00105</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell inner membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the TrkH potassium transport family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000003">
        <property type="protein sequence ID" value="PJN96865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015379">
        <property type="term" value="F:potassium:chloride symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004772">
        <property type="entry name" value="TrkH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006247">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="8 9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9 10" id="KW-0630">Potassium</keyword>
    <keyword evidence="4 9" id="KW-0633">Potassium transport</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="136"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="182"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="231"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="275"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="327"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="395"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="457"/>
            <end position="482"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="316"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="317"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="433"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022538"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR006247"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR006247-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="484" mass="51131" checksum="5F173D7402CAF239" modified="2018-04-25" version="1">MTDLRPVGYVIGWLVALLGVAMAFPAGVDLIDGDPNASAFLGAMVVTLTTGCAIGLACANGRRPAHRLTTTQGFTITTVAWLVFTAFATLPLTLGAPHLDFVDALFETTSAMTTSGGTVIVGLDHMPRSVLLWRGLLQWIGGLGVVLFAIILLPLFGVGGMQLLRAADFNTIDKILPRAKEIALAFGAVYLFLSTACALGYAWAGMSAFDALVHSMSTIATGGMANYDASFGGFSAAAQYVGTVFMLLGGMSFVRYVQFAAGQPRPLFADSQIRAFLLIYAIFAAGLLIARLLNGDVLSEPVLREVLFNLASIQTTTGFASTDYTKWGSFAVALFFCIGLICGCSGSTAGGPKVFRYQLLLAAVAREMRHLHSPNAVQVMRYQGRRVSPEVIDSVMGFFMLFFLTVGVGAVALVLLGLDPLTAISGATACISNIGPGLGPVIGPAGNFATVPHPAKLVFTFLMLVGRLEIMTVYVLFTAAFWRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T6</accession>
    <name>A0A2M9P4T6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004216">
        <property type="protein sequence ID" value="PJN92535.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92535.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9194" checksum="7BE30E7352E5829A" modified="2018-04-25" version="1" fragment="single">APSDAPFTVDDLVRNFERIALMDEYVDVGGRFVKHETPALTASGRMRQDTAPSDAPFTVDDLVRNFERIALMDEYVDVGGRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T9</accession>
    <name>A0A2M9P4T9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Biotin carboxylation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_28825</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004202">
        <property type="protein sequence ID" value="PJN92540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="5">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="57"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8958" checksum="5965A0B03D4F38EE" modified="2018-04-25" version="1" fragment="single">TGTEVTPFYDPMLAKVIVQAADRSGAIAALRAALDATSIAGIETNLGYLRDRDGGHALLRPDARQGHRPGRRPFRGHRGPARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U1</accession>
    <name>A0A2M9P4U1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004219">
        <property type="protein sequence ID" value="PJN92533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9037" checksum="DDABA80F3DF3A654" modified="2018-04-25" version="1" fragment="single">MIFDPTRLRVYECDALSAYRCPPLAVALPASTARKDEIVRRLTAAIGPQGVIFDPTRLRVYECDALSAYRCPPLAVALPASTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P587</accession>
    <name>A0A2M9P587_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003772">
        <property type="protein sequence ID" value="PJN92683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="11163" checksum="2A86F2E63BB96EC6" modified="2018-04-25" version="1" fragment="single">WVYEGIVNEKSLLTMHPDYFLLSGGLERALYRIARKHAGTRIWWWLCRIEVLRDKTGSDAKPKEFNRMLRRVVETNQLPDYEIALTETVDKSPAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G5</accession>
    <name>A0A2M9P5G5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003551">
        <property type="protein sequence ID" value="PJN92763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="5230" checksum="A7464E8E9FC0B850" modified="2018-04-25" version="1" fragment="single">MGAGGALQCRRRRRLGRPRTTDLREVMNAILYIATTGCQWVQLPKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R0</accession>
    <name>A0A2M9P5R0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003159">
        <property type="protein sequence ID" value="PJN92891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11656" checksum="197ABDDD84D3A089" modified="2018-04-25" version="1" fragment="single">SGGRRGRYREKDLGERAALEAIHDAVQLRSNERAILITEDDRVLRQALVFQPELTDRMIPITTRDFLEGLEQAQRIQSVEAVYRRAEDAGRHASQRQALSAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T8</accession>
    <name>A0A2M9P5T8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003197">
        <property type="protein sequence ID" value="PJN92878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12764" checksum="CEE39ACF820FBE35" modified="2018-04-25" version="1" fragment="single">RFPLNYLFAAFIAFMTALAISTSSLLTMAIQIFLMLYAFVFRRLTYKWPIFLFAMLIATGLYFLLDSFDVVDYITSKIMFSQASGESRSIHFRLWFSGIDAQSVLRSRIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5U1</accession>
    <name>A0A2M9P5U1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_25330</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003090">
        <property type="protein sequence ID" value="PJN92924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="53"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8379" checksum="157143BC4C774D20" modified="2018-04-25" version="1">MDMAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTNRRNGSAARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5X8</accession>
    <name>A0A2M9P5X8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3'-kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003084">
        <property type="protein sequence ID" value="PJN92929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13236" checksum="D20F08FCAEFAC02A" modified="2018-04-25" version="1" fragment="single">LFHKADEDNQADPSSIFIRGAAVARRLLAEDTPSYVLHGDLHHENIRHHPERGWLAIDPKGLYGDRAYDAANALCNPGTLPEIDPEPRQAVETSDDHADALDITRERLLSYVFAHACLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P634</accession>
    <name>A0A2M9P634_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002826">
        <property type="protein sequence ID" value="PJN93024.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93024.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13974" checksum="E1F4F524346867A9" modified="2018-04-25" version="1" fragment="single">SPRAVFLLVLPGKTLWLDGASQPIFQANALLGLQLTVDTALDYLRFFCFFVRSQGAPFYVVEDPGDPNLAELRRTRPELVESIARPASLETGVDGIFRARAAILFDNHCFRAAFDISPAGLVTMTDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P663</accession>
    <name>A0A2M9P663_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002881">
        <property type="protein sequence ID" value="PJN93005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9634" checksum="81407E35C7CB9791" modified="2018-04-25" version="1" fragment="single">MREVERGIGVGLAGIADDELHALGQPDVGQQPRDVRRRDLLGRVVPGPEPRRPGGKVVAVMVVDREFHVAANIEPRGAVLRREALVGVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P686</accession>
    <name>A0A2M9P686_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002720">
        <property type="protein sequence ID" value="PJN93066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="3"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14359" checksum="5EBEBF999B62CA67" modified="2018-04-25" version="1" fragment="single">ETMIRYIAGLYAVEKAVRGHSPDARLAARRQLSAPIVAAMKPWLEKQLSQLSSGSKLAEHICYTLGAWGGLIHFLDDGRLELDTNSIENLIRPVALTRKNSLFAGHEIGTEHWALLASLVATCKLNGVEPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P688</accession>
    <name>A0A2M9P688_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002773">
        <property type="protein sequence ID" value="PJN93043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13883" checksum="17F1DCC7DE5183E1" modified="2018-04-25" version="1" fragment="single">LTIKILYTTHSPFMVPTHALETIRTVSIAEDKGTTVTNDPTGDARTLFPIQAALGYDLAQSLFIGPNNLVVEGVTDYWILSSVSAYLAELGQPSLDEKLTLTPAGGAQKVSYMVALLTSEQLNVLVLMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E3</accession>
    <name>A0A2M9P6E3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_23390</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002526">
        <property type="protein sequence ID" value="PJN93131.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93131.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="8004" checksum="FE4BB9F51152106E" modified="2018-04-25" version="1" fragment="single">MTDEMMTLRGLVEKTPDADLLREMIGFAAERLMELEVGGLTGAAWGEKSAERLVQRNGYRDRMWETRAGSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K6</accession>
    <name>A0A2M9P6K6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TAT-dependent nitrous-oxide reductase</fullName>
            <ecNumber evidence="2">1.7.2.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.7.2.4" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01002481">
        <property type="protein sequence ID" value="PJN93148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050304">
        <property type="term" value="F:nitrous-oxide reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028096">
        <property type="entry name" value="EfeO_Cupredoxin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13473">
        <property type="entry name" value="Cupredoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="COX2_CUA" evidence="1">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9714" checksum="15EF165D3E052A55" modified="2018-04-25" version="1" fragment="single">AFSLDSFTVKQGDEVTVVVTNIDDVEDLTHGFSIINYGINMEVAPQATASVTFKADKPGVYWYYCSWFCHAMHMEMKGRMLVEPASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S1</accession>
    <name>A0A2M9P6S1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002310">
        <property type="protein sequence ID" value="PJN93233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14333" checksum="5900AD7ADA64EF5F" modified="2018-04-25" version="1" fragment="single">MLDAETAMAFNMVQHIYGIPIHSQIVMAPLFATLLAEGSLAWRRERVAEIEDAAERLMDLGGGHFSFANAAYRSLDGAAEERDSIGKRDLFGEHVGPDAFDLGFDPSQNNPFADFLDHFAKQVEAKTVSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U6</accession>
    <name>A0A2M9P6U6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002217">
        <property type="protein sequence ID" value="PJN93271.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93271.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10256" checksum="17611F9B980D4F5B" modified="2018-04-25" version="1" fragment="single">FDETADYTFTTPSCYPDAEYIPSVFEGGTWFLGAPVAAERVAFRFQITIPTGVGGEPYVSPVFLSNPDTGFTLTLTPEELTEIAEQPTITLGSTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V0</accession>
    <name>A0A2M9P6V0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GTA_TIM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21940</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002157">
        <property type="protein sequence ID" value="PJN93294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025195">
        <property type="entry name" value="GTA_TIM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13547">
        <property type="entry name" value="GTA_TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GTA_TIM" evidence="2">
        <location>
            <begin position="25"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="9"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7846" checksum="8552222010C99D07" modified="2018-04-25" version="1" fragment="single">MAAMSFGSSGRSVKATVSRAEENQTGRRLLPPRPTLGRPQIDFIGIDNYMPLSDWRDGFEHLDAAEGWPAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H3</accession>
    <name>A0A2M9P7H3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Replication protein RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20500</name>
        <name evidence="1" type="ORF">CNY89_23910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002670">
        <property type="protein sequence ID" value="PJN93081.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001838">
        <property type="protein sequence ID" value="PJN93483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93081.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12536" checksum="3E005B39EB8F520C" modified="2018-04-25" version="1" fragment="single">LRALRTHGFIDWLRRYVPTGREGRGPQVEQTSNAYRLSLPARARQLLGRLGQTPPMPDDFSYALVQRKAELDAYRASLPLDQLALFEVEDDELAQLLASLARKIQERESS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I2</accession>
    <name>A0A2M9P7I2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SGNH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001849">
        <property type="protein sequence ID" value="PJN93475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043968">
        <property type="entry name" value="SGNH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19040">
        <property type="entry name" value="SGNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH" evidence="1">
        <location>
            <begin position="2"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="12016" checksum="A83FADE11C4427ED" modified="2018-04-25" version="1">MILLEQVPEIPKDMEDLIYSAASLDAPISGVTWDWWTRRREKFDREFQIPPGVRIVNADDVFCDETLCLAGKDGVSYYFDDDHLSVAGATLVAQRVLNALSPKTAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L9</accession>
    <name>A0A2M9P7L9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_20135</name>
        <name evidence="5" type="ORF">CNY89_20335</name>
        <name evidence="4" type="ORF">CNY89_24755</name>
        <name evidence="3" type="ORF">CNY89_25350</name>
        <name evidence="2" type="ORF">CNY89_25390</name>
        <name evidence="1" type="ORF">CNY89_27825</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003857">
        <property type="protein sequence ID" value="PJN92651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003102">
        <property type="protein sequence ID" value="PJN92916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003095">
        <property type="protein sequence ID" value="PJN92922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002923">
        <property type="protein sequence ID" value="PJN92990.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001805">
        <property type="protein sequence ID" value="PJN93503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001768">
        <property type="protein sequence ID" value="PJN93532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92990.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3632" checksum="7C978ABB7F63528D" modified="2018-04-25" version="1" fragment="single">MRHDPASAAIVIMLRSLKMYGMAQAVEDLVEQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q6</accession>
    <name>A0A2M9P7Q6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001704">
        <property type="protein sequence ID" value="PJN93572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15066" checksum="517A22AC7AA6EA51" modified="2018-04-25" version="1" fragment="single">AQTLIQLRCELFAASVANPHRSTIAMRQRRAGSMPDRWKWLLFGYEPPFWALMLATALARAALTSETPRSALFTVPGSIVVSVALTRAILHFLSLPADPYGIAVGALVVLLCQPVMRIVVGLKGVSDLAEIIRAWRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S0</accession>
    <name>A0A2M9P7S0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AAA_31 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001707">
        <property type="protein sequence ID" value="PJN93569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008649">
        <property type="term" value="F:rRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003682">
        <property type="entry name" value="rRNA_ssu_MeTfrase_G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02527">
        <property type="entry name" value="GidB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="2">
        <location>
            <begin position="142"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="21944" checksum="738DDF2B1FE9BB8E" modified="2018-04-25" version="1" fragment="single">AGAGFPGLVIATLARADMPDVKVTLVESDARKCAFLAEAARAMDIQPLIRAERIESIPPLEADVISARALAPLEILVEYVTKHRRPDGIGLFPKGEAVHKEIEAAARRWRFEYRIHPSVTESQGRSSKSEPYRVSETRKPHVLAIANQKGGVGKTTTAINLGTALAASGHKVLLVDFDPQGNASTGLGINAHARRFTAYDLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C3</accession>
    <name>A0A2M9P8C3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18530</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001472">
        <property type="protein sequence ID" value="PJN93768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11243" checksum="9DF20C37250A0DB0" modified="2018-04-25" version="1" fragment="single">IDRSAFNGTTPLVIDDLDFAKGDRIVLTGFKAGTFIRPALDQTFEIWNNGGAAMLNSFSDLDKIEDSLPVAGSVTADGDALIVINQGSAGVFTLLLDNIVGMPDGII</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F3</accession>
    <name>A0A2M9P8F3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18320</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001439">
        <property type="protein sequence ID" value="PJN93803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="257" mass="28106" checksum="79910F2D9C6A53BF" modified="2018-04-25" version="1" fragment="single">AKAALYNCRAFGGVARKATAMLAKTGESSSFFTTLAEQTDWLADEQIQRFFAAPSTLDLQKLKRGKLTVYLVIPPEMLADHPRFLRVFTSLCLGVMWRKMPDGAELGTRCLFVLDEFPALGKMNKLKIEGLPLGRSYGLHAWPFCQNWAQLVDIYGESGAESFLASCDAFCVYGLDDPRTPQLVSDFIGRITPSELGGFQTVKYGDRVAFATARHSATVSCTKKALAAGREASAVGQTGSLDHVRGELAQLKQGLQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M0</accession>
    <name>A0A2M9P8M0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001388">
        <property type="protein sequence ID" value="PJN93870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3638" checksum="B0C74473E4434C5C" modified="2018-04-25" version="1" fragment="single">IVRIGAGADAANIPFLILYGPNELKDQKVSVKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R8</accession>
    <name>A0A2M9P8R8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Plasmid partitioning protein RepB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">repB</name>
        <name evidence="3" type="ORF">CNY89_17520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ParB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001335">
        <property type="protein sequence ID" value="PJN93927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd16405">
        <property type="entry name" value="RepB_like_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004437">
        <property type="entry name" value="ParB/RepB/Spo0J"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017819">
        <property type="entry name" value="Plasmid_partition_RepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011111">
        <property type="entry name" value="Plasmid_RepB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037972">
        <property type="entry name" value="RepB_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07506">
        <property type="entry name" value="RepB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00180">
        <property type="entry name" value="parB_part"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03454">
        <property type="entry name" value="partition_RepB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="7"/>
            <end position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="281" mass="31153" checksum="72135C6D5AD52493" modified="2018-04-25" version="1">MQANAVQDVAPELIDHAGVEDRLAHDDAAHRALVESLRTYGQQVPVLLRPHPETAGRFQIVYGRRRLQALRELGQPVRAMVRQLDDHALVMAQGQENTARQDLSFIEKASFAAQLAEAGYERQTICDALSIDLPMVSRMLKVGQTFPLPFLRRLGSAPGIGRERWLALASAVALPAAWERALAAVEDAGFADLSSDARFEALFKRVTQPVTLPKAPSPPLSERRVVPDASGKILAELRRGPRGVTITIPAHNAGFDRWLEANAEEVVRELHDRWMSQRQED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T7</accession>
    <name>A0A2M9P8T7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001333">
        <property type="protein sequence ID" value="PJN93929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7293" checksum="82313FCB33177256" modified="2018-04-25" version="1">MAEEEPFDWTARFAGLSRLRADVKDTLLQESRVAAVAQGTVIFGPGKAPENLLLLLDGSVRVHQTSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P939</accession>
    <name>A0A2M9P939_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ppx-GppA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001243">
        <property type="protein sequence ID" value="PJN94045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="1">
        <location>
            <begin position="57"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="22915" checksum="DA65C8DA4DD8E0F5" modified="2018-04-25" version="1" fragment="single">MATSHTRQRFSDARIIEIDTRRVLARDQRHFAVIDIGSNSIRLVVYDDLSRAPFPRFNEKSFCALGAGIDASDKLSSEAIEMAVHAIRRFEAIARAMGVETIHVIATEATRRARNGADLVAGIRAATGLETRVLSGQEEATYASLGVISGFFQPKGLAGDMGGGSLEVADVLGDRVGERMTSMPLGALPTKAMMSEGLDAAKKRVDGVLDANLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P995</accession>
    <name>A0A2M9P995_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16505</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001201">
        <property type="protein sequence ID" value="PJN94105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015424">
        <property type="term" value="F:ABC-type amino acid transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030679">
        <property type="entry name" value="ABC_ATPase_HisP-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039085">
        <property type="entry name" value="ABC_ATPase_HisP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="4"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="26273" checksum="7723A178A12C86D4" modified="2018-04-25" version="1">MSLIEITEVRKSYGDNEVLKGITLDVARAEVIAIIGKSGSGKSTLLRCVNGLETINAGTINVAGSPLLPDEVALKALRLKVGMIFQGFNLFPHLTAGKNVMLSQTVVKKTPKAEAEAMARRMLDRVGLKDKFDSYPDQLSGGQQQRVAIARALAMEPLALLCDEITSALDPELVNEVLAVVKELASEGMTLLMVTHEMRFARDVCSRVVFMHMGRVHEIGPPSEVFSNPQTPELRQFLGML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A4</accession>
    <name>A0A2M9P9A4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16360</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001183">
        <property type="protein sequence ID" value="PJN94126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="PBPe" evidence="3">
        <location>
            <begin position="1"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="2">
        <location>
            <begin position="2"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="26489" checksum="5095CE2783D89AEC" modified="2018-04-25" version="1" fragment="single">MAEIAKRLNLSVAYASASWDAMIPAISEGQYDIGMDGITIRDDRREAVDFSDPYMRSEMVMLVRADEARFTDEASFIATDDTLVGAQPGTTPFYVSVYDLLDGNEENPRLRLFETFGASVQALKAGDVDVVLTDAVAGRGYVAAEPDRLKLVGDPMAGEDFGFIFPKGSDLVAPVNAAIAELKADGTLDALTRKWFLALERLADILARSAPYRGFRWRDARTMEFRAPSCCSIRSRPALRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9C0</accession>
    <name>A0A2M9P9C0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001186">
        <property type="protein sequence ID" value="PJN94122.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94122.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12027" checksum="DFEA53E32215188F" modified="2018-04-25" version="1" fragment="single">RDGGATWRRVAGVDNVDDLAFGAPAPGASVPTIFLSGRVDGGYGIWRSTDDAASWRRIGVFPVGSLDQVTVMGADPDRFGRVYVGYMGSGFVYGEPAACEPAPHAAFAAADCSAVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K6</accession>
    <name>A0A2M9P9K6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage portal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001131">
        <property type="protein sequence ID" value="PJN94199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006944">
        <property type="entry name" value="Phage/GTA_portal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006427">
        <property type="entry name" value="Portal_HK97"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04860">
        <property type="entry name" value="Phage_portal"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01537">
        <property type="entry name" value="portal_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="366"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="366" mass="39464" checksum="4E0D391D76835C47" modified="2018-04-25" version="1" fragment="single">WSARDAGTLTRVGFLNNPVAFRCVKLIAEAAAAVPVVAQDEARRFETHPVLDLLAAPNPGQSGAEMLESFYGYLLLTGDAYLEASGETLNGGPRELYALRSDRMKVVPGPDGWPVAFEYAVGAKRHVFDMRAERPPVLHVKSFHPQDDHYGLTPLQSAGAAIDVHNSAAAWSKALLDNAARPSGAIVYKGADGLGSLAADQYARLVDELESHHQGARNAGRPMLLEGGLDWKPMGFSPSDMEFHRTKEAAARDIALAFGVPPMLLGLPGDNTYANYAEAHRAFYRLTVLPMVAKTLAALSGWLPLHYGAAFQVKVDFDNVPALAVEQPLGGQRALRFSSMTISAPRPAGARSSMIIWYFDCPGKVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M7</accession>
    <name>A0A2M9P9M7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_15815</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001119">
        <property type="protein sequence ID" value="PJN94219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043760">
        <property type="entry name" value="DUF5706"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18967">
        <property type="entry name" value="DUF5706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0051">Antiviral defense</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="27"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="62"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="141"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17970" checksum="8D9951192A831328" modified="2018-04-25" version="1">MADPYLQHLTEANKIFADQIKAADQKAAYVFTFLLAMLVWSSETRRAFNWDHLAAATPVTQVVSVVLSLSIITSLISAVLVVAPRSRPGRSLFFWGAWPTAGERLIAARRSEDEEFLFAEYMENTRTLAAICQSKYRTVALALRALLCTVVAYAILLFALPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P4</accession>
    <name>A0A2M9P9P4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Formyltetrahydrofolate deformylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">purU</name>
        <name evidence="4" type="ORF">CNY89_15530</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001084">
        <property type="protein sequence ID" value="PJN94264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008864">
        <property type="term" value="F:formyltetrahydrofolate deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016742">
        <property type="term" value="F:hydroxymethyl-, formyl- and related transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd08648">
        <property type="entry name" value="FMT_core_Formyl-FH4-Hydrolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041729">
        <property type="entry name" value="Formyl-FH4-Hydrolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002376">
        <property type="entry name" value="Formyl_transf_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036477">
        <property type="entry name" value="Formyl_transf_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004810">
        <property type="entry name" value="PurU"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42706">
        <property type="entry name" value="PTHR42706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00551">
        <property type="entry name" value="Formyl_trans_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01575">
        <property type="entry name" value="FFH4HYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53328">
        <property type="entry name" value="SSF53328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00655">
        <property type="entry name" value="PurU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Formyl_trans_N" evidence="3">
        <location>
            <begin position="49"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="256" mass="28638" checksum="D06D7218B71386F0" modified="2018-04-25" version="1" fragment="single">DLENSRFFMRVSFLSEEGATLAELREGLAPIAARFEMETAIHDASERVKVLLMVSRFGHCLNDLLYRWRIGALPIDIVGVASNHFDYQKVVVNHDIPFHHIKVTRDTKAQAEARLLALVEESGAELIVLARYMQVLSDALCVRMSGRIINIHHSFLPSFKGANPYKQAYERGVKLIGATAHFVTAQLDEGPIIEQDTVRVTHAQSPEDYVSLGRDVEAQVLARAVHAYIHRRTFVNGNRTVVFPASPGSYASERMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA55</accession>
    <name>A0A2M9PA55_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-hydroxybutyrate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14610</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000990">
        <property type="protein sequence ID" value="PJN94423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3686" checksum="8865A46351EA2DDE" modified="2018-04-25" version="1" fragment="single">FATTEQIGQTVAFLCSPAAEQITGTTISVDGGWTAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA95</accession>
    <name>A0A2M9PA95_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RES domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14475</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MbcT/ParT/Res family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000973">
        <property type="protein sequence ID" value="PJN94444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014914">
        <property type="entry name" value="RES_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08808">
        <property type="entry name" value="RES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RES" evidence="2">
        <location>
            <begin position="22"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="17535" checksum="268188395714EAB2" modified="2018-04-25" version="1" fragment="single">MSPGPAAAAPETPFVRFKGLAYRGHDPSWAHAPLSGEGAAAQGGRFNPKGVAALYLSLAVETVFKEVSAGFGHRFDPLTICAYDVECEALVDLTTEDARASATTAPASCSRSTPMICSSVNLLRFISGPSPVVRIPAARGGETRGHVTGRARPALPLSPLPAALLGQNPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA6</accession>
    <name>A0A2M9PAA6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Putative addiction module antidote protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000957">
        <property type="protein sequence ID" value="PJN94467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014057">
        <property type="entry name" value="HI1420"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR40275">
        <property type="entry name" value="PTHR40275"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02684">
        <property type="entry name" value="dnstrm_HI1420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="51"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="9966" checksum="BED687157A6701EE" modified="2018-04-25" version="1">MEAIEPFDAAPYIDTPEAEAHLLSDAFESGDAAYIAHALGIVTRARGIALVAKEAGLSRPAIYAAISGESDPKLSTLLSLFTALGVKIVVEPQEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA9</accession>
    <name>A0A2M9PAA9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000951">
        <property type="protein sequence ID" value="PJN94478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5888" checksum="5DD697C5B66DFD61" modified="2018-04-25" version="1">MVRRRGWHGAGWPDLGTGRKCHRVRVAVDQDLSDLSAPLAGVREVAFFPPMTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC3</accession>
    <name>A0A2M9PAC3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000954">
        <property type="protein sequence ID" value="PJN94474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030798">
        <property type="term" value="F:trans-aconitate 2-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.290">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023149">
        <property type="entry name" value="Trans_acon_MeTrfase_C"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12526" checksum="E9973A3E9AD6C949" modified="2018-04-25" version="1">MITPTRTSSPRPSRRGEPRRDAGWYFELLRGAGASPEVWRTIYHHPLAGAEAVVEWFRSTGLRPYLDPLDPEMREGFLDAYREAVARAYPALSDGTILLPFPRLFLLARV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC4</accession>
    <name>A0A2M9PAC4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000942">
        <property type="protein sequence ID" value="PJN94495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="15"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5394" checksum="4633EAC30F841402" modified="2018-04-25" version="1" fragment="single">MDESEPQARRSYHHGNLREALVEAALRLIEEKGPQGFTMAEAARLAGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD0</accession>
    <name>A0A2M9PAD0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">YkuD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14150</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="1">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the YkuD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000940">
        <property type="protein sequence ID" value="PJN94500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071972">
        <property type="term" value="F:peptidoglycan L,D-transpeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd16913">
        <property type="entry name" value="YkuD_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005490">
        <property type="entry name" value="LD_TPept_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038063">
        <property type="entry name" value="Transpep_catalytic_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03734">
        <property type="entry name" value="YkuD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141523">
        <property type="entry name" value="SSF141523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="YkuD" evidence="4">
        <location>
            <begin position="6"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15619" checksum="73C7EC92BCE535C6" modified="2018-04-25" version="1">MGPRTNHIVVSKSKRVLELRVGQEILRRYRIDLGFTPQGHKISSGDGRTPEGRYWIDRRNPRSEFYLSLGVSYPNAEDVARARSLGRNPGGDIMIHGEPVRKPKERARDWTAGCIAVTNAEIEEIWAMTPLGVPITILA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM0</accession>
    <name>A0A2M9PAM0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar biosynthesis regulator FlhF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000908">
        <property type="protein sequence ID" value="PJN94561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044781">
        <property type="term" value="P:bacterial-type flagellum organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010845">
        <property type="entry name" value="FlaF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07309">
        <property type="entry name" value="FlaF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="57"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6115" checksum="773602A7EF9EEF4C" modified="2018-04-25" version="1" fragment="single">MTLHAQARSAYSPAAPVRTPRAAEYEIFARVTHRLSAADETDRAAFPTLAAAASDNQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM6</accession>
    <name>A0A2M9PAM6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000892">
        <property type="protein sequence ID" value="PJN94584.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="24"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="139"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="199"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94584.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="25672" checksum="978D2F01119CD34F" modified="2018-04-25" version="1">MERDDTLGVLTLVGRSFRLVYEGFGFLFPLGFAPSLAISLLTYAVMGGPSEPMPVDFALSPAFLGTLAVNLVGGVLVTGVMCLAALDVALGKRHGLSDYVGQALRHLAPLVLLSLLVSIAIGVGATLFVIPGLYLAARFLPWTQAALFENAGWGALGRAQELTEGHRWPLVLAIVVMGLATLAILLVLGPIMAMAMDSLILASLVEAAFTALAYALISAFSGLAYLRLREIKEGVTATDVAGMID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP0</accession>
    <name>A0A2M9PAP0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13525</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000880">
        <property type="protein sequence ID" value="PJN94604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01324">
        <property type="entry name" value="cbb3_Oxidase_CcoQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008621">
        <property type="entry name" value="Cbb3-typ_cyt_oxidase_comp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05545">
        <property type="entry name" value="FixQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="13"/>
            <end position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6866" checksum="9F907E07885324E3" modified="2018-04-25" version="1">MESYGFLRQLADSWGLVFMVAAFAVVLIWVFRPGSRAKQEEAASQIFRNEDKPKDDDDGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP1</accession>
    <name>A0A2M9PAP1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_13505</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000878">
        <property type="protein sequence ID" value="PJN94607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="56"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11466" checksum="CC4EBC54BEAFC1E5" modified="2018-04-25" version="1" fragment="single">MDMAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTNRRNGVSRKTLKSEDGAFEIEVPRDREGSFEPRLIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT7</accession>
    <name>A0A2M9PAT7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L25</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">General stress protein CTC</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rplY</name>
        <name evidence="6" type="synonym">ctc</name>
        <name evidence="8" type="ORF">CNY89_13250</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000849">
        <property type="protein sequence ID" value="PJN94650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008097">
        <property type="term" value="F:5S rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00495">
        <property type="entry name" value="Ribosomal_L25_TL5_CTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.120.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.240.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01334">
        <property type="entry name" value="Ribosomal_L25_CTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020056">
        <property type="entry name" value="Rbsml_L25/Gln-tRNA_synth_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029751">
        <property type="entry name" value="Ribosomal_L25"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011035">
        <property type="entry name" value="Ribosomal_L25/Gln-tRNA_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020057">
        <property type="entry name" value="Ribosomal_L25_b-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037121">
        <property type="entry name" value="Ribosomal_L25_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001021">
        <property type="entry name" value="Ribosomal_L25_long"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01386">
        <property type="entry name" value="Ribosomal_L25p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14693">
        <property type="entry name" value="Ribosomal_TL5_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50715">
        <property type="entry name" value="SSF50715"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00731">
        <property type="entry name" value="bL25_bact_ctc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 8" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_TL5_C" evidence="7">
        <location>
            <begin position="110"/>
            <end position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF14693"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22253" checksum="99A1BCC7CB31B2E3" modified="2018-04-25" version="1">MPFGSQIMAEAPVLEAVARAGTGKGAARSARREGLVPGVIYGGGEAPMPINIKFNELLKRLKAGKFLSTLLNVKVDGVDTRVICRGVQRDVVKDLPVHVDFLRLSERSRINLFIPIEFINHELSPGLKKGGVLIETRNEIELMVTAGSIPEKIVVDLSGTNIHDTIHISNVTLPAGSRPTISDRDFAVASIQPPSGLSAAEEDEAAEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX8</accession>
    <name>A0A2M9PAX8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13075</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000834">
        <property type="protein sequence ID" value="PJN94679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="40"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="174"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="405" mass="42997" checksum="E41EE26222EC82D8" modified="2018-04-25" version="1" fragment="single">GDEVGVELLEGPPLLAGLPRVGLQPGRQLLGVGVQERTAYMSGIAAKSLAPEVIEDSERFRRILAREPVGVVFVVAPWNYPFLTAINTIVPALIAGNAVVLKHASQTILAGERLAQAFANLPEGVFANLVLTHDTTSELIAARAFDFINFTGSVAGGRSIERAAAGTFAGLGLELGGKDPGYVRADAKLETAVDVLMDGAMYNAGQCCCGIERIYVHESLYAPFVEKAVDWVSKLSLGNPLEEATTLGPMAHRRFADTVRAQTAEALAAGAKGLIDPGLFPQDAGDTAYLAPQILVEVDHSMRVMTEESFGPVVGIMPVRGDAEAIALMNDCRYGLTASVWTQDIGAAEAIGAELESGTVFMNRADYLDPALCWTGVKETGRGASLSHLGFLAVTRPKSYHFRKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB31</accession>
    <name>A0A2M9PB31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Adenylosuccinate synthase</fullName>
            <ecNumber evidence="7">6.3.4.4</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_12705</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.4" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000800">
        <property type="protein sequence ID" value="PJN94738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004019">
        <property type="term" value="F:adenylosuccinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00011">
        <property type="entry name" value="Adenylosucc_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042109">
        <property type="entry name" value="Adenylosuccinate_synth_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042111">
        <property type="entry name" value="Adenylosuccinate_synth_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001114">
        <property type="entry name" value="Adenylosuccinate_synthetase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11846">
        <property type="entry name" value="PTHR11846"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00709">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00788">
        <property type="entry name" value="Adenylsucc_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="1 7" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22094" checksum="A0C1698ED04A2428" modified="2018-04-25" version="1" fragment="single">ALLDIVFGTYPYVTSSNTLAGMAATGTGMGSNAIDFALGIVKAYTTRVGEGPFPAELTDEIGQRLGERGHEFGTVTGRKRRCGWFDAVLVRQTCTTSGAKGIALTKLDVLDGFEELKICVAYDLDGERLDHLPMAAAQQARVKPIFETMEGWSETTAGARSWADLPAQAIKYVRRIEELIGCPVAMLSTSPEREDTILVTDPFAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB45</accession>
    <name>A0A2M9PB45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000787">
        <property type="protein sequence ID" value="PJN94760.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94760.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12246" checksum="B1DE3C066A1193B4" modified="2018-04-25" version="1">MSGFTGRTHTPETKVEAAARGRSAGPRAPISDETRAKLCAARAGFKWSAESKARLAETQRRWFAEHGWKRGIFKHMTAQERADYLTLKKAGQCTRAEALRSIGRADLVEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB48</accession>
    <name>A0A2M9PB48_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">DctM domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12555</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000786">
        <property type="protein sequence ID" value="PJN94763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="58"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="97"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="136"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="178"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="205"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="240"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="322"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="357"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="7"/>
            <end position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="391" mass="41583" checksum="5A01160F6BF5E895" modified="2018-04-25" version="1">MFQPFGTMMWGTLNNFLLVAIPLFVFMGEILVRGGVTERMYNALADWLNPLPGGLLHTNIAASTIFAAISGSSVATAATIGTVAFPTFRQQNYKESWVAGTVASGATLGILIPPSINLIIYGAITNTSIGKLFTAGILPGLLLAAMFMFTIVVWCSLDHSIAGKRVGLAPWPVRRSRLKHLVPPLFIFVLVMGSIYAGFATPTEAAAVGAVAALILVGAQGGLNLAMLRDSMLSTVQTTAMTLLVLIAAFYLNFVLGVLGVPAQVSQFVAGFDVAPWTMMLILVVLYLILGCFLDALAMMIATIPIVWPIVSFLGYDSVWFGIFLVLMCELALITPPVGMNLYIVQSVRGRGSIETVILGVLPFLGCILLLVATICAFPGIVGWLPSLLHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB67</accession>
    <name>A0A2M9PB67_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000781">
        <property type="protein sequence ID" value="PJN94772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014955159" evidence="1">
        <location>
            <begin position="24"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7710" checksum="08C41E2FAD32D366" modified="2018-04-25" version="1" fragment="single">MRSLLLGLSIGLSCLALANPALADDLRRETVRFAPGASGSTIKARVKGYETVQYVLGVRAGQKMSVQLDSSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA9</accession>
    <name>A0A2M9PBA9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000755">
        <property type="protein sequence ID" value="PJN94820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9731" checksum="59759354D72B7E6D" modified="2018-04-25" version="1">MSQLHKPFFYSACDRYVGLILSLVVTAVVARMLTPEELGLFALASGIVLVTETLRDFGAGAYIVQEREPSRTGVRTAFTASLLLGGVLALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE2</accession>
    <name>A0A2M9PBE2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Formate dehydrogenase accessory protein FdhE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12015</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000732">
        <property type="protein sequence ID" value="PJN94850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1670.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024064">
        <property type="entry name" value="FdhE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006452">
        <property type="entry name" value="Formate_DH_accessory"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04216">
        <property type="entry name" value="FdhE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144020">
        <property type="entry name" value="SSF144020"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7327" checksum="290AA21CDA914C3F" modified="2018-04-25" version="1" fragment="single">MTADLKPDPSKLGAIPQPPFALLPDPPRLFARRAERWEFLARESRLAPYLRFLAELARLQARLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE7</accession>
    <name>A0A2M9PBE7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000725">
        <property type="protein sequence ID" value="PJN94866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="14388" checksum="B3C7A0566B81CB10" modified="2018-04-25" version="1">MQGGSTVAPRKPDWLTLRDKGRIRPVAPFVEIWCVLGAENDQANWTRQPLTGALLAAEGLGLAAVSVRVTAMNCKASRRPGPALRHLPAGRGCGRRPCIESAAGQAAMIPAGRFIPLGSSVQMIRPKTQPDAGAGVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI5</accession>
    <name>A0A2M9PBI5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11720</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000707">
        <property type="protein sequence ID" value="PJN94894.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014980786" evidence="2">
        <location>
            <begin position="23"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="28"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94894.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="28033" checksum="6522F04E8119551B" modified="2018-04-25" version="1" fragment="single">MSTLGTTLAFLTAFGAAGAAWAQEQPRPNILVIWGDDVGMWNISAYNRGTMCCGTPNIDRIANDGMLFFDHYAQASCTAGRAAFITGQYPLRVGLSTVGLPGSPIGLSAEDPTLAQFLKPLGYRTGQFGKNHLGDRDEMLPTAHGFDEFFGILYHLNAGEYPEQDDYPAQAFEDAGLAQRGVIHSFATPDGGQEIEDLGPFGEERQRVIDEEMLQESKRFISEAANANEPFFVWHNTTRMHYRTNLDDHYRGIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ9</accession>
    <name>A0A2M9PBJ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR/AcrR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11575</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000697">
        <property type="protein sequence ID" value="PJN94916.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023772">
        <property type="entry name" value="DNA-bd_HTH_TetR-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01081">
        <property type="entry name" value="HTH_TETR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="10"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="33"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94916.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="21731" checksum="825005691B581375" modified="2018-04-25" version="1">MERIAAPPRKDARVKLLDAALSVIRRQGFAATSVDELCKAAGVTKGAFFHHFRSKDDLGVAAAAHFGAMAEGLFAADWSRLPDPAARVPGYVALRREIIGGGFEDFTCLLGTMVQETYATSPAIRAACETGILGHARRLVPDLTAALNQAGREDIDPDGLALHVQAALQGGFILAKASGDPESARATIDHLARYLRLLFHRED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU0</accession>
    <name>A0A2M9PBU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000663">
        <property type="protein sequence ID" value="PJN94982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8901" checksum="E509571BBE54BFCC" modified="2018-04-25" version="1" fragment="single">MTASRLDRQQAALDEAEKRLSQARARRDKAAARLSTSRRKIDTRAKIILGGALLALLGKGSGAAERAVEAILALEAPHWPER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU6</accession>
    <name>A0A2M9PBU6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000647">
        <property type="protein sequence ID" value="PJN95016.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00598">
        <property type="entry name" value="HTHMARR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95016.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16640" checksum="2F32809FCCDD7192" modified="2018-04-25" version="1">MPDYFDLEQFLPYRLNRAAEAVSAGFAVNYRARHGMTRSEWRALALLGATGGITATEITRHSGMHKTKVSRAVAALESRGWLARTADPEDRRLERLELTPAGLAAFADLIEAAKSYEDGLHERLGIDGFAALRAALGAIETALPASTEERDAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW7</accession>
    <name>A0A2M9PBW7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_10860</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000636">
        <property type="protein sequence ID" value="PJN95040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="181"/>
            <end position="198"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="267"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="297"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="22"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="361"/>
            <end position="552"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="395"/>
            <end position="402"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="552"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="552" mass="60496" checksum="DCF423C8CD854972" modified="2018-04-25" version="1" fragment="single">MFESYRKLLELLTPKERRRFYLLFGMMIISGLVEMFTIAAMFPFLAVVARPSVLETNEKLSAVYHFLGFQSTQSFLAFAGLGVFCVIFFGLLFATLTQYAIYRYTAMRGYTIGGRVLRGYLSQPYAWFLSKHSADLGSTVLTEVNEVILRHMLPAMKLISQAAVGIFLVLMLVAVQPMAALGAAMLLGGSYVLIFGVVRKRVSHMGKVRKEANIQKYKIAGEAFGGIKDVKLLGLEEPFLRRYERAALRSAQANAVIGVTEEVPRNILRAVALGGILFFVVVMLLRGDGDLTAMLPILGLYAFAGLRLLPALQVIYASLTAMRFTKPMLDRVHRDFTENLPKGETAAFPPQPAPLPLREKLELRGVVYAYPGSERGALNGLDLVIPARETVGVVGGTGAGKTTAVDVLLGLLTPQQGALLVDGQEVTPDLVRAWQRAVGYVPQQIFLMDESVATNIAFGIDPKRIDMAAVERAARIAELHDFILSDLPQGYETMLGERGVRLSGGQRQRIGIARALYHDPDVLVLDEATSALDNLTERAVMDAVHNLGGQKT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY3</accession>
    <name>A0A2M9PBY3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphonate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10795</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000631">
        <property type="protein sequence ID" value="PJN95051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024370">
        <property type="entry name" value="PBP_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12849">
        <property type="entry name" value="PBP_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014637788" evidence="1">
        <location>
            <begin position="24"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="PBP_domain" evidence="2">
        <location>
            <begin position="22"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF12849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="347" mass="35907" checksum="F4C44189BA96D437" modified="2018-04-25" version="1">MKSALYAGAAAVALAAIGSSAFAQSRTQIQIAGSSTVLPYAAIVAEAFGENFDFPTPVVSSGGSSAGLQQFCAGVGLETIDIANSSRPIREGEIESCKANGVTDIVEVRIGYDGIVFASAVNGPAFTAFTPEQWYKALAAQVLKDGALVPNTATTWSEIDPSLPNAPILAFVPGTKHGTREVFEEKVVAQGCKDAGAYDALVAMGDKTTAHDACVKLRTDGRSVDIDGDYTETLARIQGDSNGIGVFGLAYYEANTSALKVATINGVAPSVETIASGDYPVSRPLYFYLKKAHVAELPGLKEFAEFFVSDPVAGPDGPLAAYGLVSDPELAATQAAVAAERTMGSSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC04</accession>
    <name>A0A2M9PC04_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Cytochrome c-550 PedF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10620</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000616">
        <property type="protein sequence ID" value="PJN95080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030991">
        <property type="entry name" value="c550_PedF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04494">
        <property type="entry name" value="c550_PedF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="5">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014902996" evidence="5">
        <location>
            <begin position="33"/>
            <end position="236"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="6">
        <location>
            <begin position="71"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="24769" checksum="687D403F182E1AAC" modified="2018-04-25" version="1">MPAARLRGGSTAPLAAPLVALSLLAAATMAFAHGDVSPQPVNTDALPEVGEEWLTENPYRADKAGEEVWLKAVEIGGSGFNQNCARCHGLGAVSGGLAPDLRFLEAEEYGDEWFADRFQHGYTQDGVTKMPAFGEVLGQKAAWAIRTYVETRPEDGALDAHSDRLHAIRNELGSGTVADPAALQDELQTIAGEVKTASGAPVADSVAFEAARILSSDAGSWKHASEILTVGLSATQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC31</accession>
    <name>A0A2M9PC31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000617">
        <property type="protein sequence ID" value="PJN95078.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014955155" evidence="1">
        <location>
            <begin position="30"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="36"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95078.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="20699" checksum="1A9CC2556773C797" modified="2018-04-25" version="1" fragment="single">MTLTRRHLFATAVGGLAASLLLVGSLAFAQDRVQAGIVVKIGGIPWFNAMEQGIKQQADADGIEAWMVGPTQADAAQQVRAIEDLIARDVDVIGIVPNDAAALAPVLGRAREAGIKVIAHEGPDLQNIDWDFEMTTVEDYGRAHMDLLAKEMGEQGKYIVYVGSLTVPLHNAWADAAIAYQKEKYPNMEMVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC38</accession>
    <name>A0A2M9PC38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Electron transporter RnfB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10420</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000601">
        <property type="protein sequence ID" value="PJN95110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014730">
        <property type="entry name" value="ETF_a/b_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012255">
        <property type="entry name" value="ETF_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21294">
        <property type="entry name" value="PTHR21294"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01012">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ETF" evidence="2">
        <location>
            <begin position="26"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10168" checksum="7DAE2BD95A48C72A" modified="2018-04-25" version="1" fragment="single">MKILVAVKLVIDPNVKVRVRADRSGVETAGLKQSINPFCEIAVEEAVRLKEKGVAGEIVVVTVGPAAAQEALRTALALGADRAIHVKTTRSPRRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC61</accession>
    <name>A0A2M9PC61_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000587">
        <property type="protein sequence ID" value="PJN95136.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000639">
        <property type="entry name" value="Epox_hydrolase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00111">
        <property type="entry name" value="ABHYDROLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00412">
        <property type="entry name" value="EPOXHYDRLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="98"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95136.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="451" mass="49036" checksum="F3AB91EBDDD259DA" modified="2018-04-25" version="1" fragment="single">PIAHYATFSALNSLQDDPMLSSFLHDIGILPTYGKVCEAPGYQSPRVNMTPDPEKSFWKDEMRHPFPAKFTKAKDGRGVEWEIGYFDVACEGITDQKTLVVVHGKGAFASHYGYLIKFAVEQGYRVIALDAPDYGLSGPGNLGRNPARSLQDIRVAFHDVIVNQLGVDKAYYLGHSMGGQIVLGYALTYPDAVEGIILEGTAGLEEFPKSITIGAEEVALFDPAIDNDKAKWEAVWGPTGMLAGERDRTAQGVRDFFGFQTRDPVTGAVSPSPFGYFKRDTEYARLHTDQRVAMITGNPAEFEQWVFAFIFDVYSIGKELVEGDPNSLYSRLTEIKAPIFLAFGAQEPFIPSTALNGLSDMAADVIIPYVNRMEQAGNPVTTKLYPGVGHFIHTDVPYEFARDTTDFMRTGRVDAISPDVITALVHGVATTAAGGAAGNVGAAEKPSGLSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC81</accession>
    <name>A0A2M9PC81_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Trigger factor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000588">
        <property type="protein sequence ID" value="PJN95133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1050">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008881">
        <property type="entry name" value="Trigger_fac_ribosome-bd_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036611">
        <property type="entry name" value="Trigger_fac_ribosome-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05697">
        <property type="entry name" value="Trigger_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102735">
        <property type="entry name" value="SSF102735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Trigger_N" evidence="2">
        <location>
            <begin position="1"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11843" checksum="D0528355B5419A55" modified="2018-04-25" version="1" fragment="single">MQVTETLNDGLKRGYSITVPASELEAKVAEKLDEARKDFQMKGFRKGKAPAALMKKMFGKSVLGEAMQESIDAAMKAHFDETGDRPALQPEVKVTNPDWKEGEDVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE8</accession>
    <name>A0A2M9PCE8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000562">
        <property type="protein sequence ID" value="PJN95194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8616" checksum="CD045429586CBC25" modified="2018-04-25" version="1">MTDSDPGWLTRAVAGREKIIVGFGALLQTYVGAFAEFPEPHKAFVIGLIGLAQLWLTADSPKPPPADPVHPDEFTSTPKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ3</accession>
    <name>A0A2M9PCJ3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Energy-dependent translational throttle protein EttA</fullName>
            <ecNumber evidence="7">3.6.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Translational regulatory factor EttA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ettA</name>
        <name evidence="10" type="ORF">CNY89_09520</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">A translation factor that gates the progression of the 70S ribosomal initiation complex (IC, containing tRNA(fMet) in the P-site) into the translation elongation cycle by using a mechanism sensitive to the ATP/ADP ratio. Binds to the 70S ribosome E-site where it modulates the state of the translating ribosome during subunit translocation. ATP hydrolysis probably frees it from the ribosome, which can enter the elongation phase.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + H2O = ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13065"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer. Probably contacts ribosomal proteins L1, L5, L33 and S7, the 16S and 23S rRNA and the P-site containing tRNA(fMet).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
        <text evidence="7">Associates with ribosomes and polysomes.</text>
    </comment>
    <comment type="domain">
        <text evidence="7">The P-site tRNA interaction motif (PtIM domain) probably interacts with the P-site tRNA(fMet) as well as the 23S rRNA.</text>
    </comment>
    <comment type="domain">
        <text evidence="7">The arm domain is inserted in the first ABC transporter domain. Probably contacts ribosomal protein L1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the ABC transporter superfamily. ABCF family. Translational throttle EttA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000526">
        <property type="protein sequence ID" value="PJN95259.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043022">
        <property type="term" value="F:ribosome binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045900">
        <property type="term" value="P:negative regulation of translational elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00847">
        <property type="entry name" value="EttA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032781">
        <property type="entry name" value="ABC_tran_Xtn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022374">
        <property type="entry name" value="EttA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43858">
        <property type="entry name" value="PTHR43858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12848">
        <property type="entry name" value="ABC_tran_Xtn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03719">
        <property type="entry name" value="ABC_ABC_ChvD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 7" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="6 7" id="KW-0810">Translation regulation</keyword>
    <keyword evidence="2 7" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="8"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="324"/>
            <end position="542"/>
        </location>
    </feature>
    <feature type="region of interest" description="PtIM" evidence="7">
        <location>
            <begin position="242"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="41"/>
            <end position="48"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7 8">
        <location>
            <begin position="356"/>
            <end position="363"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005868"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022845"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95259.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="555" mass="61779" checksum="D03093BD0CFF4D3D" modified="2018-04-25" version="1">MASYQYVYHMDGVTKAYAAGKKVFENIRLNFLPGVKIGVVGVNGSGKSSLLRIMAGIDKDFQGEARAAEGARVGYLAQEPELDPSLDVRGNVMEGVAAKRALLDRYNEVAMQVAEDYSDELMEEMTTLQDQIDAQNLWDLDNQVDLAMEALRCPPDEASIDALSGGEKRRVALTKLLLEAPDMLLLDEPTNHLDAESIAWLQKHLIAYKGTILIVTHDRYFLDDITSWILELDRGRGIPSEGNYSAWLESKAKRLAQEAREDKSRQNTLSRELEWIRQGAKARQAKQKARINAYNELAQKSEREKITTAQIVIPNGPRLGNRVIEVEGVTKAYGDRTLIDDLTFALPPGGIVGMIGPNGAGKTTLFRMLTGQEQPDSGTISYGETVRLAYVDQSRDALDPNKTAWEEISDGLDVIKLGDAEMNSRVYCGAFNFKGTDQQKKVGLLSGGERNRVHLAKLLRTGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRICTHMLAFEGDGHVEWFEGNFEDYEADKIRRLGPESVEPKRSKHQKFSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK1</accession>
    <name>A0A2M9PCK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000522">
        <property type="protein sequence ID" value="PJN95270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="56"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="84"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="117"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="18"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="16947" checksum="23FF0E992BB65BCE" modified="2018-04-25" version="1" fragment="single">MTSPSASKQTRAPDPRWVLLALAVGAFGIGVTEFSPMGLLPVIAEGVDVSIPRAGLLVSAYAIGVMIGAPLMTLAFGRFGKRTALMLLMAIFTLGNLMSAMAPGYWTLLLARLVTSLNHGAFFGLGAVVAASVVPKDRQASAVAAMFMGLTIANIGGVPAATWIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK6</accession>
    <name>A0A2M9PCK6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Cytochrome c oxidase subunit 2</fullName>
            <ecNumber evidence="10">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_09610</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
        <text evidence="10">Binds a copper A center.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the cytochrome c oxidase subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="10"/>
    <dbReference type="EMBL" id="PHNO01000534">
        <property type="protein sequence ID" value="PJN95248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045187">
        <property type="entry name" value="CcO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011759">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036257">
        <property type="entry name" value="Cyt_c_oxidase_su2_TM_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22888">
        <property type="entry name" value="PTHR22888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00116">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02790">
        <property type="entry name" value="COX2_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81464">
        <property type="entry name" value="SSF81464"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50999">
        <property type="entry name" value="COX2_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-0186">Copper</keyword>
    <keyword evidence="6 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="5 9 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="80"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="123"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="COX2_TM" evidence="13">
        <location>
            <begin position="56"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="276"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="276"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="320"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU000456"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU004024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50999"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN95248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="348" mass="36772" checksum="A49471F5F8A1CA25" modified="2018-04-25" version="1">MQPAEVQEGVPPPAGGEAEAGEIPGAPPAQSVIEGTVEPGAPPPAFVMPDLQVIGKPVPGGVNYQPAVTSVAEDTHWLSWWVHLVMAVIVLLVTALLAIVVVKFNRKSNPTPARFTHHTQLEIAWTLGPVLILILIGSFSLPILFKQLEIPEPDLTIKATGNQWYWNYEYPDNEQGVAGVGVEPFGVFGAEGLRVEPGHALGGDGAGVAGLGAGGVHDRGVLVRRHLVLAEQVEPRLGGAGQGQRPRDAVAQDRFRMLLSGDLGIAELERLVRQPVAGHRRVDPPEGDRPAAGRGQDHVALGGSGVPEIRGPGRFGGLRRSRPGGEDPGCEDEKADRISGHRRCPPVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ7</accession>
    <name>A0A2M9PCQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">23S rRNA (Adenine(2030)-N(6))-methyltransferase RlmJ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09245</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000507">
        <property type="protein sequence ID" value="PJN95313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008649">
        <property type="term" value="F:rRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007473">
        <property type="entry name" value="RlmJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37426">
        <property type="entry name" value="PTHR37426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04378">
        <property type="entry name" value="RsmJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8438" checksum="C4335993D338DB4B" modified="2018-04-25" version="1" fragment="single">MLSYQHAYHAGNPADLHKHAALAELLSRLTAKLRGISYAETHAGRGLYRLDAPEALKTKEAAEGIGRAEPAPDTPYGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV3</accession>
    <name>A0A2M9PCV3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Glutamine synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08870</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamine synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000480">
        <property type="protein sequence ID" value="PJN95371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="4">
        <location>
            <begin position="117"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="461" mass="51317" checksum="CB74B97B296518F3" modified="2018-04-25" version="1">MSRSDVLKRLPDAFRDWVGDRRIEEVECIVPDIAGISRGKAMPFAKFAREDRMYLPTSIFHQTISGDYVDMHDVNQWTESDMVLTPDYSTATAAPWADDVTLQVIHDVQNLAGELVPVSPRNVLKRVIDLYTQAGWAPVVAPEMEFYLVKPNLNPNEPIEPPLGRTGRQMVSRQAYSMSAVDEYGKVIDDIYEFSEAQGFEIDTIIQEGGAGQVEINFLHGDPLKLADQVFFFKRTIREAALRNNCFATFMAKPMQDEPGSAMHIHQSVLDVKTGRNIFTGADGGPTDLFHAYIAGLQRHLPTVVCMLAPYVNSYRRFVPGGAAPINLEWGPDNRTTGIRVPISGPEARRVENRVVGMDCNPYLALAASLTCGYLGMKAGLHPRDAVSGEAYHRPRALPRDLLAALDLFQNCPEVTGMLGEDFCALYKAIKRDEVETFLQVISPWEGRLVEVLPGHQVPLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD81</accession>
    <name>A0A2M9PD81_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_08110</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000424">
        <property type="protein sequence ID" value="PJN95505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="47"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="71"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14459" checksum="C24A9DF3DA9CE42A" modified="2018-04-25" version="1" fragment="single">RAVGENPAAVDTAGVSVTRLRYGAVILTGLLCGVAGAYLSTGQSGGFIRDMTAGKGFIALAALIFAKWRPWPALGACLLFGLLEAVGIRYQNISIPGIGAIPVQFMQALPYILTVVILAGFVGRATPPKAGGRPYVKER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC7</accession>
    <name>A0A2M9PDC7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 8">Shikimate dehydrogenase (NADP(+))</fullName>
            <shortName evidence="8">SDH</shortName>
            <ecNumber evidence="3 8">1.1.1.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">aroE</name>
        <name evidence="12" type="ORF">CNY89_07810</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>NADP(+) + shikimate = 3-dehydroshikimate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:17737"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.25"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the shikimate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.25" evidence="3 8"/>
    <dbReference type="EMBL" id="PHNO01000402">
        <property type="protein sequence ID" value="PJN95551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00087"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004764">
        <property type="term" value="F:shikimate 3-dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008652">
        <property type="term" value="P:cellular amino acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019632">
        <property type="term" value="P:shikimate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00222">
        <property type="entry name" value="Shikimate_DH_AroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046346">
        <property type="entry name" value="Aminiacid_DH-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041121">
        <property type="entry name" value="SDH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011342">
        <property type="entry name" value="Shikimate_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013708">
        <property type="entry name" value="Shikimate_DH-bd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022893">
        <property type="entry name" value="Shikimate_DH_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006151">
        <property type="entry name" value="Shikm_DH/Glu-tRNA_Rdtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21089">
        <property type="entry name" value="PTHR21089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18317">
        <property type="entry name" value="SDH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01488">
        <property type="entry name" value="Shikimate_DH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08501">
        <property type="entry name" value="Shikimate_dh_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53223">
        <property type="entry name" value="SSF53223"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00507">
        <property type="entry name" value="aroE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="7 8" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="5 8" id="KW-0521">NADP</keyword>
    <keyword evidence="6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Shikimate_dh_N" evidence="10">
        <location>
            <begin position="11"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="Shikimate_DH" evidence="9">
        <location>
            <begin position="129"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="SDH_C" evidence="11">
        <location>
            <begin position="245"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="region of interest" description="Shikimate binding" evidence="8">
        <location>
            <begin position="19"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <begin position="133"/>
            <end position="137"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="222"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="224"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="245"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>shikimate</name>
            <dbReference type="ChEBI" id="CHEBI:36208"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001648"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004871"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01488"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF08501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF18317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="28475" checksum="2BCC7DD9A024B01A" modified="2018-04-25" version="1">MTEAAPPLAGVIGWPVGHSRSPRLHGHWLARYGIAGYYIPMAVPPGELAAALAAQRQLGFRGTNVTIPHKEEALALASAATAAAEVIGAANTLVHLPEGGFRADNTDGVGFLANLRQGAPSWVPQGGPALVLGAGGAARGVVWALLEAGVPEIRLANRSRERAIALRDSFGPRVVAIDWAEAQDAVAGAALIVNTTSVGMGGQGDPPVSLDRAESGALVTDIVYTPLVTPLLAAAQARGLATVDGLGMLLHQAAPGFEAWFGRKPEVDAELRAAVLAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH5</accession>
    <name>A0A2M9PDH5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000381">
        <property type="protein sequence ID" value="PJN95601.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045565">
        <property type="entry name" value="Phage_capsid_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19821">
        <property type="entry name" value="Phage_capsid_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95601.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="309" mass="33967" checksum="7B6EF1F219B6B84F" modified="2018-04-25" version="1">MPKDLLVEAHHKLSFEANVQLATQRYGSKLRKYVTEKPCTGEGAVAANLILPIRAVRDVGRRRSNIQTTAERKRRWLVYRDPIAVGDYIDNEDVFRQTGEPTSELIRNGSMAIGRGIDECILGINEDGTIGEGGILGTIVEGKRPGGAGIPLPPANVTAHGGLGLTIGKLRAARKRIGLSEVDLDRVTPVMAITQNQDDDLLGIVETGTADLNQFEQPQLRDGKVTRLMGFEFVHINGLPVRGAIPNLIRSCPVWVPDDVILGVWQDVKTGFWNDTSARNTPYWHIDAYMDCTRREDVGVHVIECVEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM3</accession>
    <name>A0A2M9PDM3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase</fullName>
            <ecNumber evidence="9">2.3.1.117</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Tetrahydrodipicolinate N-succinyltransferase</fullName>
            <shortName evidence="9">THDP succinyltransferase</shortName>
            <shortName evidence="9">THP succinyltransferase</shortName>
            <shortName evidence="9">Tetrahydropicolinate succinylase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 11" type="primary">dapD</name>
        <name evidence="11" type="ORF">CNY89_07180</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(S)-2,3,4,5-tetrahydrodipicolinate + H2O + succinyl-CoA = (S)-2-succinylamino-6-oxoheptanedioate + CoA</text>
            <dbReference type="Rhea" id="RHEA:17325"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15685"/>
            <dbReference type="ChEBI" id="CHEBI:16845"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57292"/>
            <dbReference type="EC" id="2.3.1.117"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="9">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; LL-2,6-diaminopimelate from (S)-tetrahydrodipicolinate (succinylase route): step 1/3.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotrimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.117" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000358">
        <property type="protein sequence ID" value="PJN95657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00019"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008666">
        <property type="term" value="F:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.166.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00811">
        <property type="entry name" value="DapD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005664">
        <property type="entry name" value="DapD_Trfase_Hexpep_rpt_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023180">
        <property type="entry name" value="THP_succinylTrfase_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037133">
        <property type="entry name" value="THP_succinylTrfase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14602">
        <property type="entry name" value="Hexapep_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14805">
        <property type="entry name" value="THDPS_N_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00965">
        <property type="entry name" value="dapD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="7 9" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 9" id="KW-0677">Repeat</keyword>
    <keyword evidence="4 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="THDPS_N_2" evidence="10">
        <location>
            <begin position="6"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF14805"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="282" mass="30270" checksum="EBA2475CE8AD1111" modified="2018-04-25" version="1">MPDPAELERAIEAAWEARDTITPETGGETRAAIETALEGLDKGVIRAAERQPDGEWRVNQWAKKAVLLGFRLQEMGPQSGGPQDGGWWDKVDSKFKGWTDHDWRAAAFRAVPNCIVRRSAYIAPSVVLMPSFVNLGAYVDEGTMVDTWVTVGSCAQIGKRVHLSGGVGIGGVLEPMQAGPTIIEDDCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGSITYGEVPPYSVVVAGSLPGKPFPDGTPGPGLYCAVIVKRVDERTRSKTSINELLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP2</accession>
    <name>A0A2M9PDP2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Host specificity protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07245</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000362">
        <property type="protein sequence ID" value="PJN95646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025195">
        <property type="entry name" value="GTA_TIM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032876">
        <property type="entry name" value="J_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13547">
        <property type="entry name" value="GTA_TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13550">
        <property type="entry name" value="Phage-tail_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GTA_TIM" evidence="1">
        <location>
            <begin position="220"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="domain" description="Phage-tail_3" evidence="2">
        <location>
            <begin position="576"/>
            <end position="736"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="779"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13550"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="779" mass="85116" checksum="81E4014FBFC023E5" modified="2018-04-25" version="1" fragment="single">MALVPGTGEYALATVPIHVQRNKGNSIVANVNNDRGRPDLLVSLDQMQAELPAAKAVSLVVSWFGDDLRCGQCRLEPAVEHAQADGKQMPWRVSGLGRNAAKQVGRIDDRPMFGGTPADASVIQAIRHMTASGQKVMFYPFILMDILTGNGRPDPWTGASSQPQAPWRGRITLSVAPGQAGSPDKSAEAYAEIAAFFGSARPTDFARTSDGVTYAGPEEWSYRRFVLHYAHLCALAGGVDAFCIGSEMRSLTQARDGVASFPAVDALCALATDVRAILGPEVKIGYAADWSEYFGHHPQDGSGDVLFHLDPLWSHPDIDFVGIDNYMPLSDWRDGSGHADEVAGSIYDLGYLKGNVAAGEGFDWFYPSDAARARQERTPITDGAYGEPWVYRYKDLVSWWSLPHHNRIGGVRDGDPTRWRPSAKPIWFTELGCPAVDKGTNQPNVFHDPKSIESFFPYFSNGGRDDLIQQRYLQATYAHWTDPAHNPVSDVYGGSMLDLDRCYVWAWDARPWPDYPNRVETWLDGANYPRGHWLNARVSLPNLGEVVTEICDRAATPRVDVSDLHGSVTGYLVSDVESARQTLQPLMLAYAFDSFGRDGALAFSSRHGRMGLVLFPEELVATEGEATLELTRAAALEATGRVILSYVRGDADYQTGAAESIAADLVESDASRSSVALTLSDDEARAVADRWLSEARVALGTAQFQLPLSMLGITAGDVIGLRSSKGVESYRVDRVEEFNQRGVTTVRIEPGLYRAPIRAATLGRSRAFVAPSPAHVEFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP9</accession>
    <name>A0A2M9PDP9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AMP nucleosidase</fullName>
            <ecNumber evidence="2">3.2.2.4</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">AMP nucleosidase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07175</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>AMP + H2O = adenine + D-ribose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:20129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:78346"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="3.2.2.4"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.4" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000358">
        <property type="protein sequence ID" value="PJN95656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008714">
        <property type="term" value="F:AMP nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031100">
        <property type="entry name" value="LOG_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03641">
        <property type="entry name" value="Lysine_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011985"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00031983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="276" mass="30437" checksum="B3FE2980367596B8" modified="2018-04-25" version="1">MAKLSEHQERFPDAREDLRTSRRTPDTPQTQSPSYRLAFSDPEFLTRDELRPVRLQLELLKPEMALAERRIHSTVVIFGGARIPDPERIDPARAPGLAALAPFYDEAREFARLCTERSVASGNHEGVICSGGGPGVMEAANRGALDAGGLSVSLNIVLPHEQAPNRYGTPELSFNFHYFAIRKMHFLMRAKAIAIFPGGFGTLDEMFEALTLVQTGRMKPLPILLFGGAFWRRVIDWNALVEAGTISPGDVDLVTHVETAAEAMAALDAWDARART</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY0</accession>
    <name>A0A2M9PDY0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000332">
        <property type="protein sequence ID" value="PJN95723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8916" checksum="F7BDAB53547D3A2B" modified="2018-04-25" version="1" fragment="single">RTDFLLGAGGRPWFGEMTFHPAAGLVRYRPPEMERALGDLLDLRRFEEFRRRQRRIWRAGFRPEPPPPSLLRRAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE29</accession>
    <name>A0A2M9PE29_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">NADH-quinone oxidoreductase subunit NuoE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06480</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="6">Binds 1 [2Fe-2S] cluster.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the complex I 24 kDa subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000307">
        <property type="protein sequence ID" value="PJN95782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03064">
        <property type="entry name" value="TRX_Fd_NuoE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1590">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002023">
        <property type="entry name" value="NuoE-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042128">
        <property type="entry name" value="NuoE_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041921">
        <property type="entry name" value="NuoE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000216">
        <property type="entry name" value="NADH_DH_24kDa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01958">
        <property type="entry name" value="nuoE_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01099">
        <property type="entry name" value="COMPLEX1_24K"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 6" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="6">
        <location>
            <position position="96"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="101"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="141"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000216-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="223" mass="24405" checksum="30948B46AF1781F2" modified="2018-04-25" version="1" fragment="single">MLRRLHPEQPESFDFTPANLAWAEAQIAKYPAGRQASAVIPLLWRAQEQEGWVTRPAIEYVARMLGMAYIRVLEVATFYFMFQLQPVGKTAHLQICGTTSCMICGAEELIAVCKSKIAAHAHQLSDDGLLSWEEVECLGSCSNAPMAQIGKDYYEDLTPERLGEMIDAFRAGEVPVPGPQNGRWASEPLGGLTSLTEIPKVEKANASVALAEAQNDVIARITG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE74</accession>
    <name>A0A2M9PE74_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">30S ribosomal protein S4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rpsD</name>
        <name evidence="11" type="ORF">CNY89_06080</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.</text>
    </comment>
    <comment type="function">
        <text evidence="6">With S5 and S12 plays an important role in translational accuracy.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uS4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000284">
        <property type="protein sequence ID" value="PJN95849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015935">
        <property type="term" value="C:small ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00165">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01306_B">
        <property type="entry name" value="Ribosomal_S4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022801">
        <property type="entry name" value="Ribosomal_S4/S9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001912">
        <property type="entry name" value="Ribosomal_S4/S9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005709">
        <property type="entry name" value="Ribosomal_S4_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018079">
        <property type="entry name" value="Ribosomal_S4_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002942">
        <property type="entry name" value="S4_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036986">
        <property type="entry name" value="S4_RNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831">
        <property type="entry name" value="PTHR11831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11831:SF4">
        <property type="entry name" value="PTHR11831:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00163">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01479">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01390">
        <property type="entry name" value="Ribosomal_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00363">
        <property type="entry name" value="S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01017">
        <property type="entry name" value="rpsD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00632">
        <property type="entry name" value="RIBOSOMAL_S4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_S4" evidence="10">
        <location>
            <begin position="3"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="S4" evidence="9">
        <location>
            <begin position="94"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="15"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01390"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="23610" checksum="A095FE36875811ED" modified="2018-04-25" version="1">MTKRTSAKYKLDRRMGENIWGRPKSPVNKREYGPGQHGQRRKQKLSDFGTQLRAKQKLKGYYGDLTEKQFRRIYAEAERIRGDTGENLIGLLERRLDAIVYRAKFVPTVFAARQFVNHGHVTVNGQRVNIASYRVKEGDVVQVRERSRQLAIVLEAAGSPERDVPEYLAVDHSKMTAEFVRAPALSDVPYAVVMEPNLVVEYYAKN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED9</accession>
    <name>A0A2M9PED9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 8">Pyruvate dehydrogenase E1 component subunit alpha</fullName>
            <ecNumber evidence="3 8">1.2.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8 10" type="primary">pdhA</name>
        <name evidence="10" type="ORF">CNY89_05720</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7 8">
            <text>(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue acetyltransferase] + CO2</text>
            <dbReference type="Rhea" id="RHEA:19189"/>
            <dbReference type="Rhea" id="RHEA-COMP:10480"/>
            <dbReference type="Rhea" id="RHEA-COMP:10481"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83111"/>
            <dbReference type="EC" id="1.2.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>thiamine diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58937"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2 8">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.4.1" evidence="3 8"/>
    <dbReference type="EMBL" id="PHNO01000262">
        <property type="protein sequence ID" value="PJN95906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043231">
        <property type="term" value="C:intracellular membrane-bounded organelle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004739">
        <property type="term" value="F:pyruvate dehydrogenase (acetyl-transferring) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006086">
        <property type="term" value="P:acetyl-CoA biosynthetic process from pyruvate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001017">
        <property type="entry name" value="DH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017597">
        <property type="entry name" value="Pyrv_DH_E1_asu_subgrp-y"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00676">
        <property type="entry name" value="E1_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03182">
        <property type="entry name" value="PDH_E1_alph_y"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6 8 10" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0786">Thiamine pyrophosphate</keyword>
    <feature type="domain" description="E1_dh" evidence="9">
        <location>
            <begin position="28"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00014159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033635"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU361139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="36606" checksum="2744B5E376C9660B" modified="2018-04-25" version="1">MATARKAKTPADTRPEPTRDDLLRFYREMLLIRRFEEKAGQLYGMGAIGGFCHLYIGQEAVVVGLEACAKDGDQRVTSYRDHGHMLACGMDPKGVMAELTGREGGYSRGKGGSMHMFSKEKSFYGGHGIVAAQVPIGAGLAFANKYRGNDNVCFTYFGDGAANQGQVYETFNMASLWKLPVVFVIENNQYAMGTSLKRASSTPALWTRGQAFGIPGEAVDGMDVLKVQAAGEKAVAHARAGEGPYILEMNTYRYRGHSMSDPAKYRTREEVQKMREEHDPIDQVRARLLESGAAEDELKHIDRDIKAVVAEAAQFAQDSPEPAEAELWTDVYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE5</accession>
    <name>A0A2M9PEE5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Photosystem reaction center subunit H</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05600</name>
        <name evidence="5" type="ORF">CNY89_21585</name>
        <name evidence="4" type="ORF">CNY89_24000</name>
        <name evidence="3" type="ORF">CNY89_26100</name>
        <name evidence="2" type="ORF">CNY89_29545</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004472">
        <property type="protein sequence ID" value="PJN92456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003327">
        <property type="protein sequence ID" value="PJN92835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002698">
        <property type="protein sequence ID" value="PJN93073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002072">
        <property type="protein sequence ID" value="PJN93339.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000255">
        <property type="protein sequence ID" value="PJN95927.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015083229" evidence="1">
        <location>
            <begin position="22"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93339.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95927.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="34" mass="3354" checksum="50796F02A7CC0F82" modified="2018-04-25" version="1" fragment="single">MLRIALTTTAMAALLATGAVAQTTPAPATEPTTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG5</accession>
    <name>A0A2M9PEG5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Long-chain fatty acid--CoA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000251">
        <property type="protein sequence ID" value="PJN95939.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="20"/>
            <end position="419"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="2">
        <location>
            <begin position="428"/>
            <end position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95939.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="521" mass="56292" checksum="5BF5AC7E5F0A4FB7" modified="2018-04-25" version="1">MRQTLLTLGQMVAAQARLRPQALGARDLERSMTFRQWNARACRLANALLGLGLQKGDRVAVLAYNCVEWAEIYVAAAKAGLIAVPVNFRLSAPEVGYCIADSGAAAVIAQDGLHRLVEAARDGIAVSAGNFILFGAGAPQAGWRGYEDLLAAARDSEPGVRVAASDPWTLMYTSGTTGKPKGVIRTHEANALLALMTDIELGVHREDDALLVMPMCHANSVNFFAAFAYCGGVTSIYSRASFDPEHCLRVLGTSGATFTSLVPTHYIMMLGLTGAARRQDLGRVSKLMVSSAPARADTKREVMEMFPNSGLFELYGSSECGWVTMLRPHEQFTHLGTVGRECVGSAPVRLLDEAGEEVPDGEAGELHSCTPWTFSGYWNQPEKTAEAFRGDYCTVGDMAVRDGEGYLKLIDRKKNMIISGGENVYPSEVEAVLGACPKVKDVAVVGLPDAKWGERVHGVVVLRDGAEASETEILDWCRDRIAGFKRPRSISFFAEAEMPRTATGKILHRVLKDQLAAPADH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ7</accession>
    <name>A0A2M9PEJ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05660</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000259">
        <property type="protein sequence ID" value="PJN95914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="43"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7520" checksum="FF644299D337404C" modified="2018-04-25" version="1" fragment="single">LIQTIFLLGVYAEILVTTNGGPGYASTNLPFLIYRAARLSNDVGGAAAGGIVAVVLANIVAIFLMRAVGKNLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM3</accession>
    <name>A0A2M9PEM3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000234">
        <property type="protein sequence ID" value="PJN95989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="171"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="252" mass="27017" checksum="FA637CCD2A3E1C91" modified="2018-04-25" version="1" fragment="single">MGLFFQNDLHDDFGTWPLGYTATGGVDVGVIIAVGKAVGNGGDDAYWKAWIAAGDAIAADAGAAEAKGRTRDASAFWLQAASCYATASHPLYGRPVEPRLREGFGKQIDAFHRGLALRSHPVRQMRIPCEDTTLPGYFLPAEGRETETRPLIILNDGYDASVVQMYFASAVALSRGGYHVLFFDGPGQGEVLVEQGIPLRPDWENVIRPVVDFALTLPHVDPDRIVLSGWSLGGHLALRGASGEPRLAACVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF00</accession>
    <name>A0A2M9PF00_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000194">
        <property type="protein sequence ID" value="PJN96108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021251">
        <property type="entry name" value="DUF2793"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10983">
        <property type="entry name" value="DUF2793"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="SSF49842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="358" mass="38336" checksum="3079304CD0398FAE" modified="2018-04-25" version="1">MSDATTHLLLPYILAAQAQKHITHNEALRILDGLVQLSVLDRDLTAPPVNPDDGDRYIVGSGATGDWAGWDLSVALWTDGAWLRLPPRTGWRAWVEDEGLLLVYDGAGWIGTTPDALQNLALLGLGTTADASNPFSAKLNAALWTAKTVAEGGTGDLFYTMNKEAAGDDLGLTLQTGFVTKALVGLFGSDRFRLAVSADGSTFFDGLSVDNANGIVDQPRLPRFKAYTNYDNYVGVGTWTKIGLNNTDHNDQGAFDAANNHFVAPVDGTYLFGATLLYKINASATARMRGRLVLNGTTEIRGSLGEISATHVSLATAIWLQTMVPLTAGDTVELQGYFRVADGYFAADHTSFWGCKVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF65</accession>
    <name>A0A2M9PF65_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Cytochrome C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_04125</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000176">
        <property type="protein sequence ID" value="PJN96171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 4" id="KW-0349">Heme</keyword>
    <keyword evidence="3 4" id="KW-0408">Iron</keyword>
    <keyword evidence="2 4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cytochrome c" evidence="5">
        <location>
            <begin position="133"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="25679" checksum="206A23DBCBA68850" modified="2018-04-25" version="1" fragment="single">ISPGRDPGEALLALGGGLELATPFGTFVAPNISSDPEDGIGSWSTGDLANAMLRGVSPEGAHYYPAFPYASYARMEPGDVADLRAYLATLPAVAGKAADHRLAFPYSLRRGIGLWQLAFLSSDPVVAVDEADPELVRGRYLVEGPGHCGECHTPRNFAGGLETGRWLAGGPNPEGEGRIPDITPGGELGEWSVGDIAYYMETGFTPEFDSVGGSMAAVQRNMSMLPASDREAIAGYLKVVPALAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH0</accession>
    <name>A0A2M9PFH0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Calcium-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000136">
        <property type="protein sequence ID" value="PJN96300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24739" checksum="5441C4D31953C4DF" modified="2018-04-25" version="1" fragment="single">MTVDVTQPTSQDGLSFQELELYHQITAYRSEQGLAALRLSAALTTTAGRHVADTRENIWAEDVTLPEGANLHSWSDAYYYSDHRDPSVMWRAPARVGTDYPTAGYEISAAGFATTAEALEGWIGSPSHNAILTNTGVWEGVELQAIGLGVDTTPGAGLYEGRIFHVWFGESLDLTPPDISGTEGDDVAVGTLFEDRLFGLQGDDLISGDDGADWIRGGGGDDTLRGDLGDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH6</accession>
    <name>A0A2M9PFH6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">2-isopropylmalate synthase</fullName>
            <ecNumber evidence="3">2.3.3.13</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alpha-IPM synthase/homocitrate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.13" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000137">
        <property type="protein sequence ID" value="PJN96296.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003852">
        <property type="term" value="F:2-isopropylmalate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019752">
        <property type="term" value="P:carboxylic acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044249">
        <property type="term" value="P:cellular biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901566">
        <property type="term" value="P:organonitrogen compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002034">
        <property type="entry name" value="AIPM/Hcit_synth_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00815">
        <property type="entry name" value="AIPM_HOMOCIT_SYNTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50991">
        <property type="entry name" value="PYR_CT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="2">
        <location>
            <begin position="10"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003523"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96296.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10110" checksum="C25E18834B4100B1" modified="2018-04-25" version="1" fragment="single">MTQASAQDRVFIFDTTLRDGEQSPGATMTLEEKLEIAALLDEMGVDIIEAGFPIASDGDFEAVSAIARQTRDAVICGLARANFKDIDRCWEAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP2</accession>
    <name>A0A2M9PFP2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Sulfatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000122">
        <property type="protein sequence ID" value="PJN96348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="1">
        <location>
            <begin position="35"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="293" mass="31927" checksum="08687C0F22AA2E94" modified="2018-04-25" version="1">MPTARRCGPCWATPRLSDKYEGMRNSQNGWSIQEAGMAQLDDIVGSVMDYLKTNGLDENTIVVFTTDNGAENFTWPDGGQTPFAGGKGTALEGGFRVPAIVRWPGKVPAGKVENGIVSGLDWFPTLVAAAGNPKIAEELKAGKEIGGQTFKVHLDGYDQTALITGQGPSARKEVFYFTESTLSAVRLDDYKYRFTDQPNGWLGGTIKIDWPIIVNLRLDPFERTGMPSGGAGSLAFYNWFVTEFWRFVLVQQEVAAAAQSFIDFPPMQKGASFNMEAVKTQIEAAIAAHNIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW9</accession>
    <name>A0A2M9PFW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP transporter permease DctQ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_02980</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000117">
        <property type="protein sequence ID" value="PJN96364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="72"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="111"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="173"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="22010" checksum="DB1C96F792EA5F9C" modified="2018-04-25" version="1">MSHQHPAERHTPITAEEIAQVFEEEEAPVDLSVHSVEDWVTLAVFWGMAVCVFLQFFTRYVLNDSLAWTEEIAINCLVVVVFLGSIWCVRKSRHIQVDVLYNYLPPRAARALSTLVDLIRIVFFAYAALLLWRYVGIVSGERMVTVDLPRSLVFYSVFAAFVLMLARAIQVAVGNWRRGYSALERPAAFDGLGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ0</accession>
    <name>A0A2M9PFZ0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Acyl-homoserine-lactone synthase</fullName>
            <ecNumber evidence="3">2.3.1.184</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Autoinducer synthesis protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02455</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>a fatty acyl-[ACP] + S-adenosyl-L-methionine = an N-acyl-L-homoserine lactone + H(+) + holo-[ACP] + S-methyl-5'-thioadenosine</text>
            <dbReference type="Rhea" id="RHEA:10096"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:14125"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:55474"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:138651"/>
            <dbReference type="EC" id="2.3.1.184"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the autoinducer synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.184" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000093">
        <property type="protein sequence ID" value="PJN96456.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061579">
        <property type="term" value="F:N-acyl homoserine lactone synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009372">
        <property type="term" value="P:quorum sensing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001690">
        <property type="entry name" value="Autoind_synthase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR39322">
        <property type="entry name" value="PTHR39322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00765">
        <property type="entry name" value="Autoind_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01549">
        <property type="entry name" value="AUTOINDCRSYN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51187">
        <property type="entry name" value="AUTOINDUCER_SYNTH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2 3" id="KW-0071">Autoinducer synthesis</keyword>
    <keyword evidence="2 3" id="KW-0673">Quorum sensing</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU361135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96456.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="23358" checksum="495CC9CCCB2A5070" modified="2018-04-25" version="1">MIRFVYGDELHKYPFLKQSMFQDRAEQFRKRLGWDVTVDLAGEERDQYDALNPLYILWEGPDGRHGGSLRALPTVGRTMTAEHFRHLTHGVKIESPLIWEVTRFCLAPDAGPGVAAALMMAGCELALRFGIDQGLGVFDARMTRIYGRIGFVPEVIGVEGDLRTGIAVGLWNFTEAARRGMSERSGIPEALVAHWFDEAFAPAPVPAAVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG58</accession>
    <name>A0A2M9PG58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000090">
        <property type="protein sequence ID" value="PJN96464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="18209" checksum="19444D8C451B6D93" modified="2018-04-25" version="1">MTETETPETIRSALAYFQRGGLVEMTERTLAEIAAGRTAVECDADGVLALCHLAAEALAARARLAVPGDEMAELLATLSAFGSAGTHSNLFQRAFDALTALRARVAGLEGALTDIRDFPRPGYPRRDEDGYPMEIEYDEFAYRRMVDGYRHVARAALSPSAQEAPDAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG61</accession>
    <name>A0A2M9PG61_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Probable GTP-binding protein EngB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">engB</name>
        <name evidence="10" type="ORF">CNY89_01945</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Necessary for normal cell division and for the maintenance of normal septation.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000071">
        <property type="protein sequence ID" value="PJN96537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01876">
        <property type="entry name" value="YihA_EngB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00321">
        <property type="entry name" value="GTPase_EngB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030393">
        <property type="entry name" value="G_ENGB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019987">
        <property type="entry name" value="GTP-bd_ribosome_bio_YsxC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03598">
        <property type="entry name" value="GTPase_YsxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51706">
        <property type="entry name" value="G_ENGB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="8" id="KW-0132">Cell division</keyword>
    <keyword evidence="6 8" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 8" id="KW-0717">Septation</keyword>
    <feature type="domain" description="EngB-type G" evidence="9">
        <location>
            <begin position="43"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="23107" checksum="5153EE1E0D074E2A" modified="2018-04-25" version="1">MKAVFEVVPPPEWEEAEAGRKLFAGPCDFVKGVVAMDGLPPADRLEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEINFFALGEAIFLVDLPGYGFAEAPKPVVEKWQALLRAYLAGRPTLRRAFLLIDARHGIKAVDEEIIKLLNRSAVTFQTVLTKADKPSKADLAAVIAATAAKLAKQPAAFPGIIVTSAETGDGLPALRATIQGMAAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX5</accession>
    <name>A0A2M9PGX5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000013">
        <property type="protein sequence ID" value="PJN96797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023335">
        <property type="entry name" value="ATP12_ortho_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6951" checksum="948439E7A9059FD0" modified="2018-04-25" version="1" fragment="single">VARGALGAPEAWAASRLDETWQEEQWGVDDEAAEMARIRENDFLRAARLLELLADGRGALAQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY6</accession>
    <name>A0A2M9PGY6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ATP citrate synthase</fullName>
            <ecNumber evidence="2">2.3.3.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00550</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>acetyl-CoA + ADP + oxaloacetate + phosphate = ATP + citrate + CoA</text>
            <dbReference type="Rhea" id="RHEA:21160"/>
            <dbReference type="ChEBI" id="CHEBI:16452"/>
            <dbReference type="ChEBI" id="CHEBI:16947"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.3.3.8"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.3.8" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000016">
        <property type="protein sequence ID" value="PJN96782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003878">
        <property type="term" value="F:ATP citrate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.261">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013650">
        <property type="entry name" value="ATP-grasp_succ-CoA_synth-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032263">
        <property type="entry name" value="Citrate-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016102">
        <property type="entry name" value="Succinyl-CoA_synth-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08442">
        <property type="entry name" value="ATP-grasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16114">
        <property type="entry name" value="Citrate_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ATP-grasp_2" evidence="5">
        <location>
            <begin position="53"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="Citrate_bind" evidence="6">
        <location>
            <begin position="243"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF08442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="427" mass="46078" checksum="51D89A6D6F9C6CC9" modified="2018-04-25" version="1">MNLNGMLQGGRLLGHVDFPTSEVLGPDADEDAIQGLLDRHGLIFVKPVFRGGVGKKGKAGLIGKARTLKEALAEKERLYFCEHRHGNATAKANGVTFEGGVPAEHEVYFSISDDTRFRAPTMTLTHRGGMDIEDLPKSDVATVPFEALTGLKAFVVANALTDIGAPKEIISPLVQHLPKLWELMHHYGMTTLELNPIRMRADKGGRLTPVACDFKCGFDRDDPRVARLGLPDQLFAADVSAFEQEVNQLRTHQGQSDVFVINEQGTILAPTFGGGANSLVTEVLGEAAIISSDFGGNPPYEKMKAVAAICYRHFLARTNVLFIIGGKSNNTDILETFRGMGDALREHFAAHGPTPLYVVVGRGGPNLVRGMGNLSETLDSLGVPYRFFGFDSAISEVVNHARKIDDWMRAGGRAEIAASMGLKAAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH48</accession>
    <name>A0A2M9PH48_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">TRAP transporter small permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_00415</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000012">
        <property type="protein sequence ID" value="PJN96804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="130"/>
            <end position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="173" mass="18661" checksum="EF3A70A746802722" modified="2018-04-25" version="1">MQRLARVFGLLSNLALWLAGIGLVAMTGIVALQVFSRYVLNASPSWTEPMSVMIMGWFIFLGAAVGVRENFHMGFDVLLHFLPPKATPWLRSVSDLAVLAFGLGMLGYGAQLIVQTWTATIPVLGLPGGFSYMPLTAGGVLMSLFALERLALRASGVPVDHDPNAEEIVMNEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH64</accession>
    <name>A0A2M9PH64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8191" checksum="CA3479A560D3596C" modified="2018-04-25" version="1">MTETARLSEMSRLSRRAALLARAEESRPDDDHVPAPEDARDAALIFLGLYAFGWVLHELAHAMGWLPAFLTGAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH66</accession>
    <name>A0A2M9PH66_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="212"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="245" mass="26344" checksum="A9E6814C259D924C" modified="2018-04-25" version="1">MSETNLFDDEVPTTTEGVSPEAPAEGSQPRDEGGRFAAKDQGEAAPAAPAPAEAQAPAPSAPPAPVEKDEVSGLRRALQEERLKRQQAEQRLMQPPQPAPSLPDPIENPEEYTHAIQTSLQQQLVMERVETSRFHAERDPAIGKAGLAELDEFFNANPQASHQFLRSPSPIHAAWDWLQAEKLRQEIGTDPAAYRERLRAELLAELKPAAAVPPTPARNIPPSMARAGASAGSEPPAKGADPLFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A6</accession>
    <name>A0A2M9P4A6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DDE_Tnp_Tn3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_30285</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004743">
        <property type="protein sequence ID" value="PJN92374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7750" checksum="950BBEBA18527091" modified="2018-04-25" version="1" fragment="single">VLWNTTYLQAAIERLSAAGRPVSDDHLAHLSPLGWQHINLTGDYLWADDDMPADRLKPLRQLPGLSEQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q3</accession>
    <name>A0A2M9P4Q3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24250</name>
        <name evidence="1" type="ORF">CNY89_28960</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004246">
        <property type="protein sequence ID" value="PJN92522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002772">
        <property type="protein sequence ID" value="PJN93044.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93044.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8456" checksum="EDE995E507C2ADAC" modified="2018-04-25" version="1" fragment="single">ATVLREGDAAAREGVWPEARQDEPVAGAEVEILDDLRLAGAKGVGVDREDLGVWSTIDRVEALSEKALEVLRTRTPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q6</accession>
    <name>A0A2M9P4Q6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29165</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004319">
        <property type="protein sequence ID" value="PJN92503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7102" checksum="AB6F329AFB13C89A" modified="2018-04-25" version="1" fragment="single">RAVSHRPEAIFTDERAYLMTRVAIRRIEAAPPGDATALEDPAEMLWRAARSATGRRPSSPTSGPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4T1</accession>
    <name>A0A2M9P4T1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004244">
        <property type="protein sequence ID" value="PJN92523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="25"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9090" checksum="630488EB058BFB83" modified="2018-04-25" version="1" fragment="single">VLVGAYAIGFSGASSARGTSFVDGAFFLVAWALPVLLVWLAAFLAEELLRPGRSLRHRVFRSLQRPRDQLRRRGVLPRRLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y5</accession>
    <name>A0A2M9P4Y5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004008">
        <property type="protein sequence ID" value="PJN92602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="33"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9448" checksum="0D4FD9E9BCF2B540" modified="2018-04-25" version="1" fragment="single">LYEPQELRLMRMNPLIALGIDYADPMRAIATGAAAPAERPRADAPAAGADARPGSLYEPQELRLMRMNPLIALGIDYADPMRAIATGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P574</accession>
    <name>A0A2M9P574_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27670</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003815">
        <property type="protein sequence ID" value="PJN92670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7485" checksum="44DAB99D0E124586" modified="2018-04-25" version="1" fragment="single">MTAALNRMSAELLKIGTTKGDVRQKLSPNTVYDIVSTARAAVEHARSTGVAAVPQVPVIEVPGMIAPRDGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D0</accession>
    <name>A0A2M9P5D0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27130</name>
        <name evidence="1" type="ORF">CNY89_27140</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003650">
        <property type="protein sequence ID" value="PJN92730.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003648">
        <property type="protein sequence ID" value="PJN92732.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92730.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92732.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="38" mass="4395" checksum="195844A2185D3A10" modified="2018-04-25" version="1" fragment="single">MPPPRRLGRPRTTDLREVMNAILYIATTGCQWVQLPKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F5</accession>
    <name>A0A2M9P5F5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003589">
        <property type="protein sequence ID" value="PJN92753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="41"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11679" checksum="81EE5DC74E89C9D2" modified="2018-04-25" version="1" fragment="single">TLSAIGPRTMVERRLEGLKVPGRQPKKGRLWLNDGSCIRLRPERPNHVWSYDFVEDRTHDGQKCRMLNLIDEFTRECLAIRIDRKLKSTDVIDVLSDLFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q7</accession>
    <name>A0A2M9P5Q7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003269">
        <property type="protein sequence ID" value="PJN92850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8064" checksum="9782008B5ED676E0" modified="2018-04-25" version="1" fragment="single">FYTGAGFAPSENIVIRGNTIVSSDVRHGVFIFTNSTATENTSDAVRHKNILVEDNYIRSVNTPWRHGDPMPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Y2</accession>
    <name>A0A2M9P5Y2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25150</name>
        <name evidence="1" type="ORF">CNY89_25240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003066">
        <property type="protein sequence ID" value="PJN92935.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003038">
        <property type="protein sequence ID" value="PJN92942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92935.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5838" checksum="F3374D13C794E9D1" modified="2018-04-25" version="1" fragment="single">PNEDSIVRLIGAVLLEQNDEWQLQHRYMQIEGMVELDASAEASPSLIAEADAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P624</accession>
    <name>A0A2M9P624_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002969">
        <property type="protein sequence ID" value="PJN92968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4611" checksum="C37956B0CD4E4D17" modified="2018-04-25" version="1">MNGQQMAEARARIEAGEAVRVVARAYTVTPKTLRATLARQKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P660</accession>
    <name>A0A2M9P660_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Galactose 1-dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002832">
        <property type="protein sequence ID" value="PJN93022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3681" checksum="1EDC7467C7F2A507" modified="2018-04-25" version="1" fragment="single">MTLDLALVGLGKIARDQHLPAIAATPGLRLAAVASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G6</accession>
    <name>A0A2M9P6G6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23640</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002593">
        <property type="protein sequence ID" value="PJN93108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5667" checksum="22ED4C24F88B9B1A" modified="2018-04-25" version="1" fragment="single">QILKGLTPLRVHLQTMDNRTRTIHRRSNPSNAGNKTTRLRRDYRNGPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H5</accession>
    <name>A0A2M9P6H5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002447">
        <property type="protein sequence ID" value="PJN93161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010260">
        <property type="entry name" value="AlpA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05930">
        <property type="entry name" value="Phage_AlpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6760" checksum="45371C91CBDDAB53" modified="2018-04-25" version="1">MIEKHLRLPAVIEATGLSRSTIYDKMKDGTFPRPVNVSARAIAWPESVIAAWLAARVRQVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L1</accession>
    <name>A0A2M9P6L1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002393">
        <property type="protein sequence ID" value="PJN93186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002525">
        <property type="entry name" value="Transposase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01548">
        <property type="entry name" value="DEDD_Tnp_IS110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEDD_Tnp_IS110" evidence="1">
        <location>
            <begin position="2"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="16168" checksum="36F42A67A8DA1A04" modified="2018-04-25" version="1" fragment="single">LVGIEACGSAHHWARQLMSLGHVVRLMPPAYVKAYVRRQKNDAADAAAICEAVTRPSMRFVPVRSVENQTVLMRHKVRELLVAQRTQLLNALRSHLAEIGIIAAQGPNNARALAVLVMEGDDRVPAVVRSALLPVVRRLNELDAEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P9</accession>
    <name>A0A2M9P6P9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22830</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002386">
        <property type="protein sequence ID" value="PJN93189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15509" checksum="E302555740622246" modified="2018-04-25" version="1" fragment="single">MPIQTDFQFNQKHERASRSAGLGLEEADGTRDFLGLLRGLVGPEPVGKAKRVWKGTGFNMIWRPNFNNLSGSQPHFLQLNMTRETLDFTDISGPTGIANRGLLMEDIFLGGVAYLQTIDDSFDNTGQHFEPGVFNLVPPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T8</accession>
    <name>A0A2M9P6T8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nitrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002290">
        <property type="protein sequence ID" value="PJN93243.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027939">
        <property type="entry name" value="NMT1/THI5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31528">
        <property type="entry name" value="PTHR31528"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NMT1" evidence="1">
        <location>
            <begin position="21"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93243.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="15725" checksum="A2C9E13FFBE15091" modified="2018-04-25" version="1" fragment="single">MTAGAASAEDVTLQLKWVTQAQFGGYYVALEKGYYEEEGLDVTIKPGGPDVAPVQVLIGGGADVMVDWMPSALAAREAGAKVVNIAQPFKSSGMMLTCRNDSGVTSTEDFPGHTLGVWFGGNEYPFLSWMSSLGLSTEGGPEGVTVLKQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y5</accession>
    <name>A0A2M9P6Y5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002122">
        <property type="protein sequence ID" value="PJN93311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17761" checksum="F4096D7AA99DA50B" modified="2018-04-25" version="1" fragment="single">PTRRDISCAASEVGHAMRLAWLGRQQQAQAPATYEAWAADFALDDPSRRALNPRVLLTRSQLNDLYVTLQALTEAFAASNDTDPATFFSALKSTLAHVMRDPTQLPALDPSARANVAQVEEFDDLGDLLGAYFANLPYDSDLGTITPETWEGMGDSGRREFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P758</accession>
    <name>A0A2M9P758_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21510</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002060">
        <property type="protein sequence ID" value="PJN93348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="56"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="72"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9723" checksum="83D11B2568CA94B4" modified="2018-04-25" version="1" fragment="single">MDHGEEDDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTNRRNGVSRKTLKSEDGAFEIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P767</accession>
    <name>A0A2M9P767_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002034">
        <property type="protein sequence ID" value="PJN93360.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="26"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93360.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13716" checksum="BBD79F6C63D74321" modified="2018-04-25" version="1" fragment="single">MISDIDFDYNGTQAPNTASWQLGQPFYVENAGGLVLDQLSIDGHRVNGYGTGTGLRIKGSTDVTVSNVEMNDFKIAMNVATSSNVTIKDNSITEMSQDGLYLGALNDVLIENNYIGDFNSATPTSPTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P769</accession>
    <name>A0A2M9P769_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21060</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001960">
        <property type="protein sequence ID" value="PJN93404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6966" checksum="E90BA98DD233715A" modified="2018-04-25" version="1">MTAAFAAANEVYAETSAKNPTFKKVYDSMVAFRANQYLWFQFSEYTMDTFMMGQQRQGML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P778</accession>
    <name>A0A2M9P778_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21230</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002001">
        <property type="protein sequence ID" value="PJN93379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="31"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="47"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6869" checksum="9E6E79FCCF7AA12C" modified="2018-04-25" version="1" fragment="single">MADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTNRRNGVSRKTLKSEDGAFEIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K8</accession>
    <name>A0A2M9P7K8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001746">
        <property type="protein sequence ID" value="PJN93544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8456" checksum="28727045D044CF83" modified="2018-04-25" version="1" fragment="single">MHPDQEPLVGEIGAPYAQRGTNQAGMRAHNERLVLTLVRRRGALAKSEIARLTGLSAQTVSVIMRKLERTACSSAASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q4</accession>
    <name>A0A2M9P7Q4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Formate dehydrogenase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001731">
        <property type="protein sequence ID" value="PJN93555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molybdopterin" evidence="1">
        <location>
            <begin position="2"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="200"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="21717" checksum="81409222A4926E10" modified="2018-04-25" version="1" fragment="single">YATGGNAAIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGACDMGSFPHELAGYRHVAEGDTRALFETEWNCALDHEPGLRIPNMLDAAVEGTFRALYIQGEDILQSDPDTRHVSAGLAAMDCVVVQDLFLNETANYAHVFLPGCTFLEKDGTFTNAERRIQRVRRVMQPKNGYADWEVTQLIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R0</accession>
    <name>A0A2M9P7R0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001698">
        <property type="protein sequence ID" value="PJN93577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7438" checksum="2D937B8D2D406D59" modified="2018-04-25" version="1">MSLVESVANVVVGYGVAVVTQILIFPIFGLHTTLAQNLKMGAIFTIVSIARSFALRRVFEAIRMRTAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R1</accession>
    <name>A0A2M9P7R1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">IS1380 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19685</name>
        <name evidence="4" type="ORF">CNY89_19700</name>
        <name evidence="3" type="ORF">CNY89_23890</name>
        <name evidence="2" type="ORF">CNY89_26030</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003304">
        <property type="protein sequence ID" value="PJN92841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002660">
        <property type="protein sequence ID" value="PJN93083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001675">
        <property type="protein sequence ID" value="PJN93593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001672">
        <property type="protein sequence ID" value="PJN93596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13701">
        <property type="entry name" value="DDE_Tnp_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="2"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6111" checksum="3417F0BDA8224D0B" modified="2018-04-25" version="1" fragment="single">MVADFEGGAITSNAGGLLLGATDRAIGLVERFAACFTDGRSAERVVHDITTLVGQRVFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P818</accession>
    <name>A0A2M9P818_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Replication initiator RepC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001551">
        <property type="protein sequence ID" value="PJN93694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005090">
        <property type="entry name" value="Rep_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03428">
        <property type="entry name" value="RP-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="132"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="21605" checksum="1D49D6B6B626F097" modified="2018-04-25" version="1" fragment="single">MKQISQSTGGAANVRPKASADAPADKWRILDLLTGCAESFGIGHRELNVLRALLSFLPERIIAAGTAVVFPSNATLSDRLNGLPESTLRRHLARLVASGLVGRCDSPNRKRYARRNRSGGLLRAFGFDLAPLATAATAIEAAAERAEAARAEIAVLRENLALLRSDLLTAAAEDHDLAEAARRMLRRHASPQDLRALAEKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A6</accession>
    <name>A0A2M9P8A6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001490">
        <property type="protein sequence ID" value="PJN93748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008757">
        <property type="term" value="F:S-adenosylmethionine-dependent methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044260">
        <property type="term" value="P:cellular macromolecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043412">
        <property type="term" value="P:macromolecule modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007848">
        <property type="entry name" value="Small_mtfrase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05175">
        <property type="entry name" value="MTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTS" evidence="1">
        <location>
            <begin position="29"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13453" checksum="BF3CC5EC49AF55E2" modified="2018-04-25" version="1" fragment="single">LDALRDAGAKPFGIEVDGARAAQCREKGHSVQRANFLETVPTGDYDRVVMNPPFYGTHYVRHVEHALRYLHPNGVLTAILPATARYDHGLLSGSWEDLPVGAFSTSGTNVNTCLLTLRRPAAPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R1</accession>
    <name>A0A2M9P8R1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001336">
        <property type="protein sequence ID" value="PJN93926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.190">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009841">
        <property type="entry name" value="VirC2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038473">
        <property type="entry name" value="VirC2_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07181">
        <property type="entry name" value="VirC2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="8"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="29"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="21979" checksum="FA2D7C7D2E973F50" modified="2018-04-25" version="1">MAGIVKPRKSYDEQRREFNVKRGLPYPPEAGAPEEPAAVPPPAAPETQAEKKTRPQPAARKPRPPRLTPTAPAADGKEAVLVKLRVPAPKPGAFPLFDQAAASMGEKRALQRLLSRSLSDLADAVERGERISPATYPTGKVSLNTTKMLSPRLYAAAKTALDPLDLETPGGLGRAISMAALVRYLEGGIRVSARHAPTLPAANEED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8T3</accession>
    <name>A0A2M9P8T3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001321">
        <property type="protein sequence ID" value="PJN93943.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021242">
        <property type="entry name" value="DUF2799"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10973">
        <property type="entry name" value="DUF2799"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93943.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="18514" checksum="378B1ABE22210536" modified="2018-04-25" version="1" fragment="single">PGPRRWRAGRAEGLKRYCTPQNAYDAGLGGNRLRQGRRHPGPRRWRAGRAEGLKRYCTPQNAYDAGLGGNRLNPVCPASDRLRLALAEEQGLRVHAVRREIDRLDYANASDEARLDDLLTGELDKDDRRRIRKLRRDIEDRNYEIRRLEREAQLSRPGVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W2</accession>
    <name>A0A2M9P8W2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17225</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001296">
        <property type="protein sequence ID" value="PJN93976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="154"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="1"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="21905" checksum="C0D1D971BDDA1266" modified="2018-04-25" version="1" fragment="single">LSAVIGAGLGLLAGYGPRWLGNAIMRGADVIMSFPSLLLAVIVLYMLKPSVGNLILVLAVTRIPIYLRTTRAEVLEVKERMFVQAAQVMGASPFRIVFRHILPIIVPTLVTIATLDFAFVMLAESALSFLGIGIQPPSITWGLMVAQGKQYLANAWWLAFWPGLAIILTTLSLNLLSNWLRIALDPAQRWRLEIGARKNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W7</accession>
    <name>A0A2M9P8W7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001307">
        <property type="protein sequence ID" value="PJN93959.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93959.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11776" checksum="0FC769178EC80E33" modified="2018-04-25" version="1" fragment="single">MWSLEGNALGGFLAAFSQEERLAIVQRKHDRERAALNLRMRAAVKDAIDAIKERAAIERAQAREAFMHDCADLRRQQQEERAAMRMRWQQHSAARRVALTCD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P956</accession>
    <name>A0A2M9P956_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16650</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001220">
        <property type="protein sequence ID" value="PJN94077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15678" checksum="00568A7CB23F7399" modified="2018-04-25" version="1">MTADFPEAGQVIKYHYLWRWQAIQGETEGRKKRPSCVVLVVVNQAGHHVLFIVPITSKAPPKERQALAVPQTEVRRAKLDRDAPLWIIVDELNVDILETSYTLEDRVAQGRFSAAFTDRIIEAVQAVRTSGKLGLSKRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P966</accession>
    <name>A0A2M9P966_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AsnC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_16600</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001213">
        <property type="protein sequence ID" value="PJN94086.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94086.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18482" checksum="F8A0ECA4951F1754" modified="2018-04-25" version="1">MSGQKLDPIDRKILAELQADGRMTNVELSRRVGISAPPCLRRVRALEEEGLIRGYHAEINARELGFEVQVFAMVGLTSQAEADLSAFEAQCRAWPLVRECHMLNGEIDFILKCVAPDLPSFQSFLTEHLTSAPNVASVKTSLVIRCAKDEPAVPFEVYEARARVRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P972</accession>
    <name>A0A2M9P972_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001232">
        <property type="protein sequence ID" value="PJN94059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10040" checksum="EB206D944C1B2596" modified="2018-04-25" version="1">MEARRWVAAATFPPDRPLLNLSQAAPMDPPPEPLRAAMTEMLADPACHIYGPVLGLPDLRAEIADRWSQAYGGRIAPADVAVTPGCGSRSRCW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P990</accession>
    <name>A0A2M9P990_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16580</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001210">
        <property type="protein sequence ID" value="PJN94090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Histidine kinase" evidence="5">
        <location>
            <begin position="50"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="4">
        <location>
            <begin position="2"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="339"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="339" mass="36740" checksum="F387A089622596E2" modified="2018-04-25" version="1" fragment="single">RIADETLQLIEAKRRLERQSRELEEAARQLRAANEALRRVDALKDAFLAQVSHELRTPMTSIRSFAEILGDMEEVDSETAKRFLGIIRDESQRLTRLLDEILDLSFLESGRVSFHIAPVRLADVVDRALGATEGLLTAAGVEVTRDPEGAEVTVETDFDRVAQVAINLISNAVKYGRSANPGIRIAIRETEEAAHLEVSDRGPGIAADKREEVFQKFSRLGEANLAGSAGLGLPIAREIMRNLGGDLIVMPNAPGAVFRVVLPKRARACGRACGGGGGMTAFRVRIAGTEVTVDRVSGLALAADPTRIEEVHDIVGPVGWIAPPAPVRLCLERAFDGSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P992</accession>
    <name>A0A2M9P992_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L7/L12</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rplL</name>
        <name evidence="7" type="ORF">CNY89_16530</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer. Part of the ribosomal stalk of the 50S ribosomal subunit. Forms a multimeric L10(L12)X complex, where L10 forms an elongated spine to which 2 to 4 L12 dimers bind in a sequential fashion. Binds GTP-bound translation factors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the bacterial ribosomal protein bL12 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001205">
        <property type="protein sequence ID" value="PJN94101.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00387">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00368">
        <property type="entry name" value="Ribosomal_L7_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000206">
        <property type="entry name" value="Ribosomal_L7/12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013823">
        <property type="entry name" value="Ribosomal_L7/L12_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008932">
        <property type="entry name" value="Ribosomal_L7/L12_oligo"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036235">
        <property type="entry name" value="Ribosomal_L7/L12_oligo_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45987">
        <property type="entry name" value="PTHR45987"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00542">
        <property type="entry name" value="Ribosomal_L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16320">
        <property type="entry name" value="Ribosomal_L12_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48300">
        <property type="entry name" value="SSF48300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00855">
        <property type="entry name" value="L12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="domain" description="Ribosomal_L12_N" evidence="6">
        <location>
            <begin position="5"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L12" evidence="5">
        <location>
            <begin position="60"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF16320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94101.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="12875" checksum="DA66FA35A5760343" modified="2018-04-25" version="1">MADLKKLAEEIVGLTLLEAAELKKILKDEYGIEPAAGAVVAAAGPAAAGPAEAAEEQTEFDVILKAAGAQKINVIKEVRAITGLGLKEAKDLVEAGGKAVKEGVSKTEAEAIKEKLVAAGAEVELK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I5</accession>
    <name>A0A2M9P9I5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001126">
        <property type="protein sequence ID" value="PJN94207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="136"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="153"/>
            <end position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18715" checksum="89F918414BADDBC0" modified="2018-04-25" version="1">MRAVPDEAAAFQIQAKMRSKTPRRRMTTKAFILGHAANDFEDDMGLVPRLEEQLDAVGEEARHEGKRPPGRIEDSLRPVAILDVGAVDLDRAQPAVGVDVGQDAPLAATEALSGVTAFALPFRSAVRTLWRSRIAAEGDASRPGRTRPAMTRVWSMPAQTLSRSQRRRYQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X7</accession>
    <name>A0A2M9P9X7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15120</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001041">
        <property type="protein sequence ID" value="PJN94333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FCD" evidence="4">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7953" checksum="4A48AB68701EB713" modified="2018-04-25" version="1" fragment="single">SRNPFMRSVSSLIEAALTVAFQLSSPALTPQGIVASAAEHLAIVHAIAARDEARVTEAMRRVILTGATRIRDVLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA16</accession>
    <name>A0A2M9PA16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001022">
        <property type="protein sequence ID" value="PJN94369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015562">
        <property type="term" value="F:efflux transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003423">
        <property type="entry name" value="OMP_efflux"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02321">
        <property type="entry name" value="OEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="80"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007613"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16129" checksum="60546C59F9D6A2A2" modified="2018-04-25" version="1">METTEEGTSQILALQWLVFDFGQRQAVAAAAKQGSRAANVLFNGAHQRLIFEVAQSYYLYGAASQRRVFAESALKNARRRAVLPEARLEGPRSPHPPGDRSQGPLGRAADRRLGPRRADGPRPGGGAGDPSLGRQPRRLGTARPDRHGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA19</accession>
    <name>A0A2M9PA19_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001020">
        <property type="protein sequence ID" value="PJN94372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13586">
        <property type="entry name" value="DDE_Tnp_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="43"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="11462" checksum="BAC75B79DBAB9A16" modified="2018-04-25" version="1" fragment="single">SRRRFPFVEHIFADGGYAGKLVSWAKDKTHVTLEIVRHMPWMKDFVVLRRRWVVERTFAWIMKCRRLVRDYEQLTRVAETFITIAAAATLLRRWP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA60</accession>
    <name>A0A2M9PA60_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Inositol-1-monophosphatase</fullName>
            <ecNumber evidence="5">3.1.3.25</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14645</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>a myo-inositol phosphate + H2O = myo-inositol + phosphate</text>
            <dbReference type="Rhea" id="RHEA:24056"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:17268"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:84139"/>
            <dbReference type="EC" id="3.1.3.25"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the inositol monophosphatase superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.25" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000994">
        <property type="protein sequence ID" value="PJN94414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008934">
        <property type="term" value="F:inositol monophosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052832">
        <property type="term" value="F:inositol monophosphate 3-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052833">
        <property type="term" value="F:inositol monophosphate 4-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046855">
        <property type="term" value="P:inositol phosphate dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01639">
        <property type="entry name" value="IMPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033942">
        <property type="entry name" value="IMPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020583">
        <property type="entry name" value="Inositol_monoP_metal-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000760">
        <property type="entry name" value="Inositol_monophosphatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022337">
        <property type="entry name" value="Inositol_monophosphatase_SuhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00459">
        <property type="entry name" value="Inositol_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00377">
        <property type="entry name" value="IMPHPHTASES"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01959">
        <property type="entry name" value="SBIMPHPHTASE"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00629">
        <property type="entry name" value="IMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="182"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001033"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="19867" checksum="CFE5D29155A41612" modified="2018-04-25" version="1" fragment="single">MSQASANVNVMIKAARKAARSLVRDFGEVEQLQVSSKGPGDFVSKADIRAEQLIREELTEARPNYGWLGEESKEVKGADPTRRWIVDPLDGTTNFLHGLPHWSISIALEHKGEVVAGVIYDPAKDEMFVAEKGGGAWLNDRRLRVSGRRELIETIFATGIPFAGNKALGPTLREIAAVASVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB4</accession>
    <name>A0A2M9PAB4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000950">
        <property type="protein sequence ID" value="PJN94480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11368" checksum="DEC8FE8AF5CE07E0" modified="2018-04-25" version="1">MLAASASIPPEDYVLAIASDSGGAEVGSGRRFGWPSEALVVGGPPRGMTLRAVGKYLATRHMHPAIRTVEGPSRPDIIEDQDDLMDGAFNGTSMEQIMPSRYPRRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC2</accession>
    <name>A0A2M9PAC2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000945">
        <property type="protein sequence ID" value="PJN94490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014948674" evidence="1">
        <location>
            <begin position="30"/>
            <end position="125"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13364" checksum="7C2DED9D2AD57F69" modified="2018-04-25" version="1">MTMATNTTRRALLKAAPAAMALGAGAAAAAEPSEIMRLLRECVALRAYINGPDSPTDDDWGNEAGAALRELELQLTTIPARTAQEMAAKVLVWTAYADLKGVELDYQLDLLILAEVWQLTGFTGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN1</accession>
    <name>A0A2M9PAN1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">LysR_substrate domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13595</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000885">
        <property type="protein sequence ID" value="PJN94596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="1">
        <location>
            <begin position="8"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14257" checksum="625F6443AC1EE264" modified="2018-04-25" version="1" fragment="single">AYARRDIDAAALPWVGQVDEDAPRLAPTRALERLRQRDERLRVTTSETGVILAAVRAGLGRGLLPMRLAEACAELTRLDIQGPALVRTLHLHLHPDTVQTARIQAVVRWLRECAGAVFGAEEFANGAETE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP7</accession>
    <name>A0A2M9PAP7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Beta-ACP synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000882">
        <property type="protein sequence ID" value="PJN94599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5660" checksum="684303A9BA0CAD5B" modified="2018-04-25" version="1" fragment="single">MAGRRVVITGHGAISALGMTAAENRASMREGRCAIGPMQFEDVDRLSISIGGQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU5</accession>
    <name>A0A2M9PAU5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">NADH oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_13315</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000857">
        <property type="protein sequence ID" value="PJN94639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001709">
        <property type="entry name" value="Flavoprot_Pyr_Nucl_cyt_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001433">
        <property type="entry name" value="OxRdtase_FAD/NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00175">
        <property type="entry name" value="NAD_binding_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00371">
        <property type="entry name" value="FPNCR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="3" id="KW-0408">Iron</keyword>
    <keyword evidence="4" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="5">
        <location>
            <begin position="3"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding FR-type" evidence="6">
        <location>
            <begin position="104"/>
            <end position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="342" mass="36535" checksum="53902551A34E0442" modified="2018-04-25" version="1">MCYRIALNFEDGVTRFVDCKAGEKVLDAAFRNKINLPMDCSDGVCGTCKCRAESGAYDIGEDYIEDALSEDEAAEGLVLTCQMVPSSDCVLSVPTTSLACKTGQQSFAATVTGIEPYQDAAVVLELAVDEGAAAPAFLPGQYVNIDVPGSGDHRSYSFSTAPGDRTLGFLIKKIPDGVMGNWLARAKPGARLNLTGPMGSFYLRDGDGPLLFLAGGTGLAPFLSMLEALARAGSRRQIHLIYGVTRDLDLVLVDEIAAYAARLPNFTFATVVAEGASSHPRKGWVTQHMPEEMLAAGETDVYLCGPPPMVDAVRRYLDEKGIKAASFHYEKFTPNAPLKATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW1</accession>
    <name>A0A2M9PAW1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000841">
        <property type="protein sequence ID" value="PJN94662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="32"/>
            <end position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8856" checksum="3C98133FBBC17929" modified="2018-04-25" version="1">MQADDHLHRGGRGKGQALDRGNQATVDQGVGQREEQVDRPRGAEAGEELRALGADAVQRLQLGEERVEGFGARTHAPDRRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY1</accession>
    <name>A0A2M9PAY1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ArsR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000824">
        <property type="protein sequence ID" value="PJN94697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3684" checksum="20876241195D207B" modified="2018-04-25" version="1" fragment="single">MTVALDDLDRNILSLLQEDCTLPLDEIARRLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY8</accession>
    <name>A0A2M9PAY8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2938 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000828">
        <property type="protein sequence ID" value="PJN94689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021329">
        <property type="entry name" value="DUF2938"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11158">
        <property type="entry name" value="DUF2938"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="16731" checksum="EF918039E2FF0926" modified="2018-04-25" version="1">MISLAAHGALLGLGATILFDLWLVALGLKTGSPPDMSPLGRWAWHMKDGAFRHDDIGKAAPYAHEKALGWAVHYAVGIAYGKIFALIMGPGWLAAPTLLPAWIFGIVTLGAGWFILQPCLGAGMAASRTPNPGARRIEGLIGHTVFGIGIWLTALLIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ4</accession>
    <name>A0A2M9PAZ4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000821">
        <property type="protein sequence ID" value="PJN94701.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008866">
        <property type="entry name" value="Phage_lambda_GpA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05876">
        <property type="entry name" value="Terminase_GpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94701.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="30814" checksum="54AA4A20DB8F13F0" modified="2018-04-25" version="1" fragment="single">MYAPTSTNSPRSGPTSGDDDALTDFDGAGEILRAWGNGLRPDPDLTVSEWADRHRMLSGRASAEPGRYRTVRTPYMREIMDRLSPGDPTQRVVFMKAAQVGATEAGNNWIGFAIHQAPGPMLAVQPTVELAKRNSRQRIDPLIDESPELRERVKPARSRDAGNTMLSKEFAGGILIMTGANSAVGLRSTPARYIFLDEVDAYPASADEEGDPVTLAEARSLTFAHRRKVLLVSTPTIRGLSRIEREYEASDQRRFFVPCPHCGAMQWLKFDRLRWQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB28</accession>
    <name>A0A2M9PB28_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12670</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000797">
        <property type="protein sequence ID" value="PJN94741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11203" checksum="12AC27355FB5D6C2" modified="2018-04-25" version="1" fragment="single">EDGGARAPRSAWGAFRLGLFTQLANPKPAVMFSAIFIGTVPPGTPWPVKAALLGVVFLNETLWNIGVARIFSHHRTRAGYLRMKGGIDRAFGGMLAVLGVRIAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB95</accession>
    <name>A0A2M9PB95_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_12315</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M50B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000763">
        <property type="protein sequence ID" value="PJN94801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="100"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="132"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="8">
        <location>
            <begin position="49"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="8">
        <location>
            <begin position="137"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="25679" checksum="827362C332FF523E" modified="2018-04-25" version="1">MKWSARVGRFAGIDVYIHVTFLALLAYFAVVFWTESHSLAAVATGLGLVLLLFLCVLLHEYGHALTARRFGIRTRHITLLPIGGLALLESMPTDPKKEILVALAGPAVNLVIAAAAFLVLQVAPPGMTVPGMAGLGFLEALIAANLTLAIFNLLPAFPMDGGRVLRAALSFRMDRLRATQIAASLGKVLAGGLALWGLMGNPVLILIAAFVWIGGPDLPSAKRPEPDQMDLETYLACRDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA6</accession>
    <name>A0A2M9PBA6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 4">Translation initiation factor IF-2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">infB</name>
        <name evidence="7" type="ORF">CNY89_12165</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000747">
        <property type="protein sequence ID" value="PJN94826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003743">
        <property type="term" value="F:translation initiation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03702">
        <property type="entry name" value="IF2_mtIF2_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10050">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044145">
        <property type="entry name" value="IF2_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000795">
        <property type="entry name" value="T_Tr_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000178">
        <property type="entry name" value="TF_IF2_bacterial-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015760">
        <property type="entry name" value="TIF_IF2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023115">
        <property type="entry name" value="TIF_IF2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036925">
        <property type="entry name" value="TIF_IF2_dom3_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009000">
        <property type="entry name" value="Transl_B-barrel_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43381">
        <property type="entry name" value="PTHR43381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00009">
        <property type="entry name" value="GTP_EFTU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11987">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50447">
        <property type="entry name" value="SSF50447"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52156">
        <property type="entry name" value="SSF52156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00487">
        <property type="entry name" value="IF-2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01176">
        <property type="entry name" value="IF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="4 7" id="KW-0396">Initiation factor</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tr-type G" evidence="5">
        <location>
            <begin position="33"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="IF-2" evidence="6">
        <location>
            <begin position="234"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00020675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000644"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00009"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF11987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="455" mass="48991" checksum="931E6FF2F47C5E3A" modified="2018-04-25" version="1" fragment="single">LWCARRPHGDACDQEPEPRAHRLNAGGCPRGKVAADDSVMPQTIEAINHARAAGVPMIVAINKMDRPGADARKVRTQLLQHEVVVEEMGGETLDVEVSAVTGKGLDTLLENIALQAEVLDLRANPDRLAEGAVIEAKLDVGRGPVATVLVQKGTLRRGDIFVVGEQWGKVRALINDKGERVDEAGPSVPVEVLGLNGTPDAGDMLNVVDDEAKAREIADYRSRLTKDKRAAVGSATTLDQLLAKAKADRDVKELPILIKSDVQGSAEAIVQAMEKVGNAEVRVRVLHSGVGAITESDVTLADASNAPIIGFNVRANAPAREAANQKGVEIRYYSIIYDLVDDVKKAASGLLSPEVKEKFVGYAKIKEVFKITGVGKVAGCVVSEGVARRAAGVRLLRDNVVIHQGKLKTLKRFKDEVKEVLAGQECGMAFENYEDIREGDVIEIFETETVERQLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC5</accession>
    <name>A0A2M9PBC5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyrroloquinoline quinone biosynthesis protein PqqE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12050</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000735">
        <property type="protein sequence ID" value="PJN94846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023885">
        <property type="entry name" value="4Fe4S-binding_SPASM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13186">
        <property type="entry name" value="SPASM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04085">
        <property type="entry name" value="rSAM_more_4Fe4S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SPASM" evidence="1">
        <location>
            <begin position="84"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18291" checksum="70D9CE2A56A6F78B" modified="2018-04-25" version="1" fragment="single">MHRQNMEQLPEAIAMAERLGARRIEVATVQFHGWAMPNRGALMPTREQAKAAGEIVKAARERLKGRLVIDYVPADYHARFPKPCMGGWGSTGINVNPEGRVLPCHAAETIPGLAFERVGERPLAEIWFRGPAFEAFRGTDWMQEPCRSCERREIDFGGCRCQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH3</accession>
    <name>A0A2M9PBH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000716">
        <property type="protein sequence ID" value="PJN94879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="32"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12707" checksum="3D197D9F5F242AF1" modified="2018-04-25" version="1" fragment="single">LDIEANRVGEAIGRSTEKRMLLLAGLMVADTMTQLEDRYASLEDRLRAAEERARITEAKSAMLAANALKLETAATHRIDPAQVQALRQERDAAHSLIQDLAEEIEALAVRAEQGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN0</accession>
    <name>A0A2M9PBN0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">ZnMc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_11435</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000684">
        <property type="protein sequence ID" value="PJN94941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031012">
        <property type="term" value="C:extracellular matrix"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024079">
        <property type="entry name" value="MetalloPept_cat_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001818">
        <property type="entry name" value="Pept_M10_metallopeptidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006026">
        <property type="entry name" value="Peptidase_Metallo"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00413">
        <property type="entry name" value="Peptidase_M10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00235">
        <property type="entry name" value="ZnMc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ZnMc" evidence="5">
        <location>
            <begin position="26"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="359" mass="38381" checksum="C8CD19357C0D5C06" modified="2018-04-25" version="1" fragment="single">MAVPISGAFSGNRQIDAILDNGYFWENETWRGTARIDYVILPYPEDAASVTRWEARAFAAGMAAWEQVADVDFRPARRANRLDLAIGLADTEDLPNAPPEEYVAFQEGPYLASLKDDGPLAVGVYFRDRPSWTAASTEPGGRGFLTVLHELGHFLGLAHPFDEGSSGWSPVEGEVEEISTMSTVMAYADWRNDPATGYADLDRVWPLEAPTPLGYGHFLTPTARDVAAVQHLYGASLDQDDGDGDGDPNDVYRLPGTNAAGTGWTTIWDTGGIDAIRHSGARAVHISLEPFRFEDETTSFGGLSQARSVLGGLMIADDVTGALTRAQGGFRGVLIENASGGSGDDRIEGNLAANALSGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ0</accession>
    <name>A0A2M9PBZ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10935</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000642">
        <property type="protein sequence ID" value="PJN95029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035437">
        <property type="entry name" value="SNase_OB-fold_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016071">
        <property type="entry name" value="Staphylococal_nuclease_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00565">
        <property type="entry name" value="SNase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00318">
        <property type="entry name" value="SNc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50199">
        <property type="entry name" value="SSF50199"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50830">
        <property type="entry name" value="TNASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014767398" evidence="1">
        <location>
            <begin position="25"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="domain" description="TNase-like" evidence="2">
        <location>
            <begin position="21"/>
            <end position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17237" checksum="4E850B64D056C3EE" modified="2018-04-25" version="1">MGRVIRSAFLGASVALLLTGAAHGGESLRVIDGDGIELAGQSVRLWGIDAPELRQECSKDGRRYPCGQKAKEALTAFLRAAAPVCETVNRDRYGRRVAKCEVAGEDLGALMVRSGWAVDWPRYSKGAYAEEQNEAEAHKRGLWAGFFAAPWEWRKEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC18</accession>
    <name>A0A2M9PC18_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Macrolide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10695</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000622">
        <property type="protein sequence ID" value="PJN95068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8776" checksum="ECD7044F10BCAF9B" modified="2018-04-25" version="1" fragment="single">VAIARAIVGRPAVLMADEPTGNLDTARSREIMELVTRFNQDDGVTIVMVTHEADMAQYARRLIHFRDGRIASDAAPPRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC50</accession>
    <name>A0A2M9PC50_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Enolase</fullName>
            <ecNumber evidence="8">4.2.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">2-phospho-D-glycerate hydro-lyase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">2-phosphoglycerate dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">eno</name>
        <name evidence="13" type="ORF">CNY89_10355</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>(2R)-2-phosphoglycerate = H2O + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:10164"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:58289"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="EC" id="4.2.1.11"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 8">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="activity regulation">
        <text evidence="8">The covalent binding to the substrate causes inactivation of the enzyme, and possibly serves as a signal for the export of the protein.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 4/5.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cytoplasm</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Secreted</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell surface</location>
        </subcellularLocation>
        <text evidence="8">Fractions of enolase are present in both the cytoplasm and on the cell surface. The export of enolase possibly depends on the covalent binding to the substrate; once secreted, it remains attached to the cell surface.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the enolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.11" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000594">
        <property type="protein sequence ID" value="PJN95121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00187"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009986">
        <property type="term" value="C:cell surface"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000015">
        <property type="term" value="C:phosphopyruvate hydratase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004634">
        <property type="term" value="F:phosphopyruvate hydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03313">
        <property type="entry name" value="enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00318">
        <property type="entry name" value="Enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000941">
        <property type="entry name" value="Enolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036849">
        <property type="entry name" value="Enolase-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029017">
        <property type="entry name" value="Enolase-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020810">
        <property type="entry name" value="Enolase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020809">
        <property type="entry name" value="Enolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020811">
        <property type="entry name" value="Enolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11902">
        <property type="entry name" value="PTHR11902"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00113">
        <property type="entry name" value="Enolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03952">
        <property type="entry name" value="Enolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001400">
        <property type="entry name" value="Enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00148">
        <property type="entry name" value="ENOLASE"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00002">
        <property type="entry name" value="enolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01192">
        <property type="entry name" value="Enolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01193">
        <property type="entry name" value="Enolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51604">
        <property type="entry name" value="SSF51604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54826">
        <property type="entry name" value="SSF54826"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01060">
        <property type="entry name" value="eno"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00164">
        <property type="entry name" value="ENOLASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5 8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0964">Secreted</keyword>
    <feature type="domain" description="Enolase_N" evidence="12">
        <location>
            <begin position="4"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="Enolase_C" evidence="11">
        <location>
            <begin position="139"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="8 10">
        <location>
            <begin position="364"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="8 9">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8 9">
        <location>
            <position position="337"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="155"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="164"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="312"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent; in inhibited form" evidence="8">
        <location>
            <position position="337"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="8 10">
        <location>
            <position position="388"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR001400-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001400-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM01192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="SMART" id="SM01193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="425" mass="44991" checksum="87D9B0969BF9609E" modified="2018-04-25" version="1">MSVIIDVVGREILDSRGNPTVEVDVLLEDGAMGRAAVPSGASTGAHEAVELRDGDKSRYGGKGVLKAVEAVNGPICDALTGLRATDQVRIDDLLCDLDGSKNKARLGANAILGVSLATAKAAAQSLGTPLYRYVGGTSARVLPVPMMNIINGGQHADNPIDIQEFMIMPVGADSIRDAVRIGAEVFHSLKKGLHDAGHNTAVGDEGGFAPNLSSTREALDFIMTSIEKAGYRPGEDVYLALDCAATEYYKNGKYDISGEGKILTAEENAAYLAALVDSYPIVSIEDGMSEDDWDGWRLLTDAIGDRCQLVGDDLFVTNTERLSRGIEAGVGNSILVKVNQIGSLTETLAAVDMAHRAGYTAVMSHRSGETEDATIADLAVATNCGQIKTGSLSRSDRLAKYNQLIRLEEDLGDNALYAGRSILSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC65</accession>
    <name>A0A2M9PC65_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">ATP-dependent Clp protease ATP-binding subunit ClpA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">clpA</name>
        <name evidence="6" type="ORF">CNY89_10430</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000602">
        <property type="protein sequence ID" value="PJN95108.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028299">
        <property type="entry name" value="ClpA/B_CS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041546">
        <property type="entry name" value="ClpA/ClpB_AAA_lid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17871">
        <property type="entry name" value="AAA_lid_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00871">
        <property type="entry name" value="CLPAB_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="4">
        <location>
            <begin position="148"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="domain" description="ClpB_D2-small" evidence="5">
        <location>
            <begin position="314"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM01086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95108.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="424" mass="46934" checksum="6878C54C764C4170" modified="2018-04-25" version="1" fragment="single">RFQKIDVNEPTTEDAFKILKGLKPYFEDHHDVRYTLDAIRAAVDLSARYIHDRKLPDKAIDVIDEAGAAQHLLPESRRRKTITQKEIEAVVAKIARIPPKSVSKDDAEVLKDLDATLKRVVFGQDKAIEALASAIKLSRAGLREPEKPIGNYLFTGPTGVGKTEVAKQLADKLGVELLRFDMSEYMEKHTVSRLIGAPPGYVGFDQGGLLTDGVDQHPHCVLLLDEMEKAHPDVYNILLQVMDNGKLTDHNGRTVDFRNVVLIMTSNAGAAEQAKEALGFGRARREGEDTAAVERQFTPEFRNRLDAVISFQPLPREVILQVVEKFVLQLEAQLLDRNVQIELTPEAAAWLGEKGYDDKMGARPLGRVIQENIKKPLAEELLFGKLTKGGLVQVTVADGALKLVIEPAGAPRLTSRKPPLLTAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC72</accession>
    <name>A0A2M9PC72_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">tRNA-specific adenosine deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000583">
        <property type="protein sequence ID" value="PJN95147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6711" checksum="490CD67163645A96" modified="2018-04-25" version="1" fragment="single">ALAAARRRAVVYGAADPKSGGVDHGARVFSHPQTHHKPEIVTGVRETECAEILRAFFAGRRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC78</accession>
    <name>A0A2M9PC78_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">MoeA_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000598">
        <property type="protein sequence ID" value="PJN95114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032324">
        <property type="term" value="P:molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005111">
        <property type="entry name" value="MoeA_C_domain_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036688">
        <property type="entry name" value="MoeA_C_domain_IV_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03454">
        <property type="entry name" value="MoeA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63867">
        <property type="entry name" value="SSF63867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoeA_C" evidence="1">
        <location>
            <begin position="9"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4342" checksum="852183E0DEC55A8A" modified="2018-04-25" version="1">MTILPGAFSARIAELAAADGLVVIPADCAEIRPGAPLRFLSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC80</accession>
    <name>A0A2M9PC80_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000583">
        <property type="protein sequence ID" value="PJN95146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014754291" evidence="1">
        <location>
            <begin position="23"/>
            <end position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7697" checksum="2E1DE34713F36EDB" modified="2018-04-25" version="1">MSVCHGLPLVFATGLIAGAASAHDPSTTLSESMAAGRMSQPAAEQFVAHTGYDVDEAQEMTINEIAFIRWGDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC87</accession>
    <name>A0A2M9PC87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sodium-independent anion transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_10130</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000578">
        <property type="protein sequence ID" value="PJN95160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011547">
        <property type="entry name" value="SLC26A/SulP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00916">
        <property type="entry name" value="Sulfate_transp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="26"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfate_transp" evidence="6">
        <location>
            <begin position="1"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00916"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="17602" checksum="32AFECA1BA7B2FFF" modified="2018-04-25" version="1" fragment="single">MAAVIVTIMLIPQSLAYAMLAGLPPEVGLYASILPLVAYAIFGTSRALAVGPVAVVSLMTAAAIGKLNVAGPAEYAAAAAVLAFLSGVILLAMGVFRLGFIANFLSHPVISGFITASGILIATSQARAILGIEAGGETLPAMLASLAAHIGTTNLPTLAIGLSAAAFLFWVRRGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC98</accession>
    <name>A0A2M9PC98_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000589">
        <property type="protein sequence ID" value="PJN95132.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002560">
        <property type="entry name" value="Transposase_DDE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01610">
        <property type="entry name" value="DDE_Tnp_ISL3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_ISL3" evidence="1">
        <location>
            <begin position="8"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="DDE_Tnp_ISL3" evidence="1">
        <location>
            <begin position="245"/>
            <end position="319"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95132.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="35617" checksum="270D566000E20BCF" modified="2018-04-25" version="1">MAWLKANPQVRIICRDRGPGYGAAAAEAAPQAQQMADRWHLFENASAAFLAAVRSELPRLRKALSPEGPVDPEILSKAERIQWEAAMTREAVNRRVLALASQGVPLKAIARTTGLSRQTIRKIVRGQRHDIFRARQSSLDPWIVRLEAEWTGGCRVGAELWRRLRASGFAGSLRVVSEWTTRRRRDDRLGQPAGSPLSARTIARGLTVEREAGSARIALVNAAIETAVPELIVARDLMDRFHAMMRSNDVGRLEPWIASAKEGNLASFAAGVEADREAVAAAITEPWSSGQVEGKVNRLKLIKRQMYGRANFDMLKARVMSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ8</accession>
    <name>A0A2M9PCQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09205</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000504">
        <property type="protein sequence ID" value="PJN95320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10587" checksum="DCA73E23616188C8" modified="2018-04-25" version="1" fragment="single">MGLGLGLVSAPAFAQVADLVDRTAFRVCADPANKPLSAEDGSGFENQIAEVVAAGLGVPVRYTWFPQVTGFIRQTLQAGKCDVVMGYAQGDELVLNTNHY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV1</accession>
    <name>A0A2M9PCV1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_08885</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000481">
        <property type="protein sequence ID" value="PJN95370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00474">
        <property type="entry name" value="SSF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="16"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="76"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="151"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="183"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="218"/>
            <end position="236"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="27817" checksum="0E3B8BF25C79CF9F" modified="2018-04-25" version="1">MRFFTVPDAVEARKSVVYASGFIGYFFLLICVLGLGGVAIVSQNPDFFVNGEVGGTLIGGNNMVALHLAKATGGDLMLGFLSAVAFATILAVVSGLALAGAAAVSHDLYANVIRKGKSTEAEEVRVTKLATIVIGVIAIGLGIAFKGQNLAFLVALAFGIAASSNFPILILSMYWKGLTTRGAVAGGVTGLVSAVALVILGPAVWVKVLGHAAPIFPYDNPALFSMSAAFLVTYVVSKLDKSPRAAAEAAAYEDQYIRAQTGFGAAAASSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX0</accession>
    <name>A0A2M9PCX0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AP endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000478">
        <property type="protein sequence ID" value="PJN95373.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036237">
        <property type="entry name" value="Xyl_isomerase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013022">
        <property type="entry name" value="Xyl_isomerase-like_TIM-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01261">
        <property type="entry name" value="AP_endonuc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51658">
        <property type="entry name" value="SSF51658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AP_endonuc_2" evidence="1">
        <location>
            <begin position="30"/>
            <end position="321"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95373.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="352" mass="39249" checksum="E4BC8BFFFAC7F552" modified="2018-04-25" version="1">MRAIKGPALFLAQFAGDAAPFDDWRSITSWAADCGYVGVQIPSWDARLFDLNKAAASQDYCDEVKGVAAEAGLVVTELSTHLQGQLVAVHPAYDAAFDGFAAPEVRGNPKARAEWAVDQVRKALTASRNLGLTAHATFSGALAWPYVYPWPQRPAGLVEEAFDELARRWRPILDHAEEMGVDLCYEIHPGEDLHDGITFEMFLERVGGHARANMLYDPSHYVLQHLDYLEHIDIYHDRIRMFHVKDAELNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGGVFSKLTQYDFDGWAVVEWECCLKHPEDGAREGAEFVRAHMIRVTEKAFDDFAGAGTDRAANRRMLGLEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ5</accession>
    <name>A0A2M9PCZ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000462">
        <property type="protein sequence ID" value="PJN95411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="174" mass="18683" checksum="E667BF74802C3DA2" modified="2018-04-25" version="1">MTDLDDLRLKAGDALFLDFDGTLAELGPDPDAIRLPEAKIAALDPELVVCLGDSFDDMDASGALSGRDHARLGAIASGRDWLWIAGNHDPLPLTLPGAHQTELRLGPLTFRHAAETDTAPGEVSGHYHPKLRLAAKGRAITRACFLHDSRRLILPAFGAYTGAISRQLKDALND</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCZ7</accession>
    <name>A0A2M9PCZ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000465">
        <property type="protein sequence ID" value="PJN95403.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95403.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7954" checksum="3110BA0A28AA3B65" modified="2018-04-25" version="1" fragment="single">MFHRVLPALPVASLAGSRAARKGASRRAQWVSRPSTLTRSGSCFVQIGDENVHRVRALMDEVFGEENFLSLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD01</accession>
    <name>A0A2M9PD01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08585</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000458">
        <property type="protein sequence ID" value="PJN95419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007452">
        <property type="entry name" value="TamB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04357">
        <property type="entry name" value="TamB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7292" checksum="3709CBA95F8D0A36" modified="2018-04-25" version="1">MITEEDGSTAVRAGRYIDDNIYLDVQTDSRGDSRAQINLEVSDSLTLRGAVGTGGNSSLGVFYERDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD23</accession>
    <name>A0A2M9PD23_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">5'-nucleotidase</fullName>
            <ecNumber evidence="3">3.1.3.5</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">surE</name>
        <name evidence="8" type="ORF">CNY89_08475</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a ribonucleoside 5'-phosphate + H2O = a ribonucleoside + phosphate</text>
            <dbReference type="Rhea" id="RHEA:12484"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:18254"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58043"/>
            <dbReference type="EC" id="3.1.3.5"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the SurE nucleotidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.5" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000451">
        <property type="protein sequence ID" value="PJN95436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106411">
        <property type="term" value="F:XMP 5'-nucleosidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030048">
        <property type="entry name" value="SurE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002828">
        <property type="entry name" value="SurE-like_Pase/nucleotidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036523">
        <property type="entry name" value="SurE-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30457">
        <property type="entry name" value="PTHR30457"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01975">
        <property type="entry name" value="SurE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64167">
        <property type="entry name" value="SSF64167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00087">
        <property type="entry name" value="surE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SurE" evidence="7">
        <location>
            <begin position="3"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="6">
        <location>
            <begin position="146"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17102" checksum="BA2F3C73AE45BE0F" modified="2018-04-25" version="1" fragment="single">MRILITNDDGISAPGLAVAEAIAAELAGPEGDVWVVAPAFEQSGVGHCVSYIRPMRIEPLEERRFAVEGSPADCVLAGIGEILRDHPPDLIISGVNRGHNIAEDTLYSGTVGGAMEGALHGLPSVALSQYFTTTSFFKRGGSEMVPAGPPFPPPPLGNLPQTTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD84</accession>
    <name>A0A2M9PD84_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08090</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000423">
        <property type="protein sequence ID" value="PJN95507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="313"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="313" mass="33985" checksum="DF97FFC67F274943" modified="2018-04-25" version="1" fragment="single">MQWGVNGHPITAYPGVDYGEQIALVAGMGATSYRVNVSHADQAPYLARLVEAAKAQGVVILPVLTPGVDLAGADPDQLRRAAHDFATALAARFKDDIPVWELGNELENFAILQPCETRDDGTVYPCDWGPAGGLGALDYFGPRWAKVSAVLRGLSEGIEAVDPDLRKAIGTAGWGHVGAFERMRADGLDWDISVWHVYGEDPEWAFARLAEYDRPIWVTEINHPLGSQDGEAAQAEGLRRMMLRLVELSGRFDLEAAHLYQLLDEPYWAPSFEALMGLVPPRALPGGGWRPLAPKPAYAVARAIMEEDSAGAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC0</accession>
    <name>A0A2M9PDC0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07925</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000411">
        <property type="protein sequence ID" value="PJN95536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015159">
        <property type="term" value="F:polysaccharide transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003715">
        <property type="entry name" value="Poly_export"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019554">
        <property type="entry name" value="Soluble_ligand-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02563">
        <property type="entry name" value="Poly_export"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10531">
        <property type="entry name" value="SLBB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <keyword evidence="4" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942217" evidence="2">
        <location>
            <begin position="23"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="domain" description="SLBB" evidence="3">
        <location>
            <begin position="107"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF10531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="18288" checksum="AB7430DDF2F36C57" modified="2018-04-25" version="1" fragment="single">MRQVLLALLTLVLAAPMALAQAAGYRIQPGDVLSVTVLEDETLNRQALVLPDGRISVPLAGTIRASNQTVESVEKTIADRLASNFAVRPNVFVSVTTVNEDGLTFPIYVLGRVSDPGLREVETGTNLLQAVALAGGLDRFAATKRIQLRRRGADGQEQIFVFNYKAVER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD2</accession>
    <name>A0A2M9PDD2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glyco_trans_2-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000403">
        <property type="protein sequence ID" value="PJN95550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="29"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="339" mass="37080" checksum="630B4D428BC0C49A" modified="2018-04-25" version="1">MRQRPVPIPRTPAPPCKRGPDVSVAPLVSVVIPAYNRVASIRVAIESVLRQSWTDFELLVVDDGSTDGTQDAVRAIPDPRLRLIETPRNMGASAARNLGIEEARGDWVAFQDSDDEWLPLKLEKQMARLLAPRPEGEAGYVAAYCGMMILGEPHGPVGAPDGRMWPRYFPGPEEGVVEGDLLVPLLRMSLISTQTLVARRDRLREVGGFDPELRALIDWDCVLRLAPLGPIAFVDEPLALQRFSTNSITRDRARKLAAQKRMAEKHAALFAAHPKLSARHHYVMAGGHRIAGDLPGARAELALARKLDPGNARYWGMSLGLAALSLLPGRSPDNGSDLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG8</accession>
    <name>A0A2M9PDG8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_07545</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000383">
        <property type="protein sequence ID" value="PJN95595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006042">
        <property type="entry name" value="Xan_ur_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00801">
        <property type="entry name" value="ncs2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="17"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="107"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="134"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="238"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="284"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="388"/>
            <end position="410"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="422"/>
            <end position="439"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="451"/>
            <end position="471"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="492" mass="51417" checksum="BF903696B7B30828" modified="2018-04-25" version="1">MATAVHPVDEMLPPPKLFTLGLQHVLVMYAGAIAVPLIVGRALQLPPEDVAFLISADLFCCGVVSILQSLGVTPWFGVRMPVMMGVTFASVGPMVSIALVHPGAEGARMIFGSIIAAGFIGVLIAPIASRMLRFFPPVVTGTIILVIGITLMRVGINWIFGVPVGPTAPHLVSPEHAAWLEQVSALGGTVPPAPPGLKLAPTLDNPAYAPVSNIVLSMIVLGVVMVIARFAKGFVSNIAVLLGIVTGGVIAALLGMMHFEKIAEAAWFAPITPFHFGTPIFDPVLIATMTLVMIVTLIESTGMFLALSDLTDSKLTQPRLSAGLRMDGLGTIIGGVFNTFPYTSFSQNVGLVGVTGVRSRYVCVAGGVIMVVLGLIPKMGALVEALPTVVLGGAGIVMFGMVAATGIRILHRVDFVTNRNNLFVVAISVGLGMIPLVAPDFKMWLPHVIHPLIDSGIILAALGAVLLNVFFNGAKAVSEEDMREAAIAGGEH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ0</accession>
    <name>A0A2M9PDQ0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 5">Biotin carboxyl carrier protein of acetyl-CoA carboxylase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_07280</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 5">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000364">
        <property type="protein sequence ID" value="PJN95642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001249">
        <property type="entry name" value="AcCoA_biotinCC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01071">
        <property type="entry name" value="ACOABIOTINCC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0092">Biotin</keyword>
    <keyword evidence="5" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="5" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="6">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017562"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6154" checksum="FEA150D03F2D1A31" modified="2018-04-25" version="1" fragment="single">APPFAKVGDVVAEGQTILIIEAMKTMNQIPAPRAGRVKRVLVEDGSPVEFGAPLIILE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE17</accession>
    <name>A0A2M9PE17_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkaline phosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000319">
        <property type="protein sequence ID" value="PJN95754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014721872" evidence="1">
        <location>
            <begin position="22"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="9846" checksum="634F412F18DE446A" modified="2018-04-25" version="1" fragment="single">MKPILLGCASVLALCAAQARAEAFNRIASFPVARNLPEGADPATVTSAEIVSATADGMTLVYTDSPTGRIGFVDIADPRAPRALGGLDMGGEPTSVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE68</accession>
    <name>A0A2M9PE68_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000287">
        <property type="protein sequence ID" value="PJN95839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="21133" checksum="E23FC800074279BF" modified="2018-04-25" version="1">MARRPSTVLGLPELEKALAELGQRLGATVGYRVLEKVAAPIRDDMIAAAPFDDGVTRDSIKMIRASSERSRLGKAAYSQTLRDGGSIGEARGALRSTMRGLKASSGLAGIIIGPGRAPQALLAEFGTGERFHKNGKSVGTMEAQPYVRPSWDKHAGGLVAATMHFVRLALGLACTAAIVTVLALGSAPAPANANACNPRIQSC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE69</accession>
    <name>A0A2M9PE69_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000287">
        <property type="protein sequence ID" value="PJN95840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9163" checksum="80DA50C610C41591" modified="2018-04-25" version="1">MADKFKGISSGTSGPAVRHFLITPSDSVDLDPRPRLIYCAAAGTIVVRDAAGTDLSYTLERGDRLEFRGVRVMAAGTTGTWYGWI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA8</accession>
    <name>A0A2M9PEA8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06055</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000283">
        <property type="protein sequence ID" value="PJN95852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="137"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="177"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="233"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="71"/>
            <end position="249"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="266" mass="27462" checksum="3BDBA7185E083F64" modified="2018-04-25" version="1">MAKKAQPRSETAGRARSRPPVALLRLGFLVLILAAWQAVALAAPPGLFAGPLETAQAFAGLATEGRLTQALGQSLTVYLTGTLAAVVVGVTIGAAMGTVQSLGATLDVYVHALAATPRVAFIPLIILLLGLGLEAKILVVFLGAVMPVILNAFAGVRAADADLIEMARATGASRSRILVHVVLPGALPYLLAGVRIGATIGLINTVVAELYTAVSGLGGLLALYASRFQMAEYLAVVVVLALIGVAMTEGLRLAETRLLRWRGEPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA9</accession>
    <name>A0A2M9PEA9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Gamma-glutamylcyclotransferase</fullName>
            <ecNumber evidence="1">4.3.2.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>glutathione = 5-oxo-L-proline + L-cysteinylglycine</text>
            <dbReference type="Rhea" id="RHEA:47724"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58402"/>
            <dbReference type="ChEBI" id="CHEBI:61694"/>
            <dbReference type="EC" id="4.3.2.7"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the gamma-glutamylcyclotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.7" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000271">
        <property type="protein sequence ID" value="PJN95885.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003839">
        <property type="term" value="F:gamma-glutamylcyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061928">
        <property type="term" value="F:glutathione specific gamma-glutamylcyclotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006751">
        <property type="term" value="P:glutathione catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06661">
        <property type="entry name" value="GGCT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006840">
        <property type="entry name" value="ChaC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013024">
        <property type="entry name" value="GGCT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036568">
        <property type="entry name" value="GGCT-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12192">
        <property type="entry name" value="PTHR12192"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04752">
        <property type="entry name" value="ChaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110857">
        <property type="entry name" value="SSF110857"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95885.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="19437" checksum="9EA3C9557CB62855" modified="2018-04-25" version="1">MDVWIFGYGSLIWKPGFDWAEQRLATLTGWRRRFCMTSIHYRGTPEAPGLVLALDADREGQCHGVAYRLAPETAEETLAYLRARELVSNAYDEHRVPLSLDDGREVEAYAYVTNRAHPQYRGGLSLAEQAEVIARAVGPMGPNAEYLLNTVASLEALGLEDAELAELAALVRGAGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC6</accession>
    <name>A0A2M9PEC6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000264">
        <property type="protein sequence ID" value="PJN95901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8728" checksum="17F6FA70DEA651BE" modified="2018-04-25" version="1">MTHAAIIENKHLSAVLAWIKSEQDKTPPKVKTKLSSARNAYVKTGWTPPGRPSMVDAIAEKRRAEAAREADRAAGQSCDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF1</accession>
    <name>A0A2M9PEF1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">GlsB/YeaQ/YmgE family stress response membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05825</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0410 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000268">
        <property type="protein sequence ID" value="PJN95892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007341">
        <property type="entry name" value="Transgly_assoc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04226">
        <property type="entry name" value="Transgly_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="33"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8767" checksum="87A50A29949D73E7" modified="2018-04-25" version="1">MLGVGFVTFLIVGLIAGYLASRLRGARNSLGQNLAIGILGAFLGGGLFWLVGLRSSGFIGAIVVATVGAFVLLWLLDRYGRPKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG6</accession>
    <name>A0A2M9PEG6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000247">
        <property type="protein sequence ID" value="PJN95947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004675">
        <property type="entry name" value="AhpD_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00778">
        <property type="entry name" value="ahpD_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="26"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="12372" checksum="34C2D542C2EFF39F" modified="2018-04-25" version="1">MAAEKDYRAIIAGIGAYTGELRRGVPSVMQGFGALARAATAAGAVDQKTKELIALAIGVTQRCDGCIGFHGKALVDLGATREEVSEVLGMCVYMGGGPALMYAADALRAFDQFAAARDAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI1</accession>
    <name>A0A2M9PEI1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cytochrome C biogenesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05480</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000248">
        <property type="protein sequence ID" value="PJN95946.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003834">
        <property type="entry name" value="Cyt_c_assmbl_TM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02683">
        <property type="entry name" value="DsbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="180"/>
        </location>
    </feature>
    <feature type="domain" description="DsbD" evidence="2">
        <location>
            <begin position="3"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95946.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="20027" checksum="935C0C54918F1729" modified="2018-04-25" version="1">MTAAVFFVLGLSTVFLLLGLAASTLGRALLAWQREMTIAAGLVITLFGLHFLGVLRIPFLMREARVEAKVAVGSPFGAYVLGLAFAFGWTPCIGPVLGSILSLAAQEGSVERGMLLMAVYAAGLGLPFLLTALFLRQAMGLMAGIKRHMALVERLMGGLLLVVGVLMLTGGFTALSFWLLETFPGLALIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI5</accession>
    <name>A0A2M9PEI5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein ParB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000263">
        <property type="protein sequence ID" value="PJN95904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="1">
        <location>
            <begin position="5"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="558"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="558" mass="60983" checksum="90736A1923762EB6" modified="2018-04-25" version="1" fragment="single">MMVVEQVSFADLYIHPLNPRLDPPQAEIDALAANIRELGLIQNLAGLRCDGGKVGVIAGGRRLRALAQLQDDARFATVPVKFADDEATAAVWAAAENSLRSALHPADEIHEYAMLRDKGIGEAAIAIAFGVTKAHVKRRLRLAGLPEPVLAALRADRIGLTEAAVFVLCDDPARIEEVLTQIGGHPGRYSEDSIKRLLKAGAVRDTDRRVRFVGVPAYREAGGRISTDLFGGELYLDDVDILDACFAARFAEVAEETRVRDGWKWVQTSAESSAWGISDQLDAITLYPAEGALTEEETARRDELVLRAEGDDLDPAETEELDRLTAILDGDHTAEQKQHAGVVLYLDYGGELRATHAMVLPVDQPAAAEAGIIERALVAEDDEAPEAAQDGAPRLSEALKQDLRAVRRGARQHAALQQPDLLLDLLAFHLQSNFGRAFSLHRYAVNVTPTTETGYAPDPRLLDTEAGRSNATDLAKAFRAFRKRGAEHVREVLTLELARLLDPSDYGNDMLAPVFDKLAKVEPRAVWTPTTENFFKRAPGGYLDTLWCELRGIEADST</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP1</accession>
    <name>A0A2M9PEP1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Preprotein translocase subunit Tim44</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05050</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Tim44 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000224">
        <property type="protein sequence ID" value="PJN96020.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006886">
        <property type="term" value="P:intracellular protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039544">
        <property type="entry name" value="Tim44-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007379">
        <property type="entry name" value="Tim44-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016985">
        <property type="entry name" value="UCP031890_Tim44-rel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10721">
        <property type="entry name" value="PTHR10721"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04280">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031890">
        <property type="entry name" value="UCP031890_transporter_Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00978">
        <property type="entry name" value="Tim44"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-0496">Mitochondrion</keyword>
    <keyword evidence="2" id="KW-0999">Mitochondrion inner membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tim44" evidence="5">
        <location>
            <begin position="73"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023128"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96020.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="221" mass="24142" checksum="62385FA62F61FAA1" modified="2018-04-25" version="1">MGSQMIQIIILAAIALFLVLKLRSVLGTREGFEKKPPIPAPAPASRRDRSFEVIEGGGPDPDIADFIDVEGPAGKALAAMKKADPNFGVHDFTHGARQAYEMIVMAYENGDLDTLRDLLSPEVFEPFAAAIEERRAKGYVVQAEFIGVREVRLVDAHFDPATAEGDVTMRFVGELTSVVRDPQGAIVEGDAKEIKQQRDVWTFSRVMTSENPNWLLTGTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF13</accession>
    <name>A0A2M9PF13_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000203">
        <property type="protein sequence ID" value="PJN96084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12844">
        <property type="entry name" value="HTH_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="22"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11543" checksum="6212B14FDE892F20" modified="2018-04-25" version="1">MPKPAISRIPPQMRPEEIGKRLREIREAFGLKPAEIADMLDIERTYWSRFERGHRPINEEVAYLLTERFGVTLDFILLDRWGGLPLDVAEKLRSVRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF50</accession>
    <name>A0A2M9PF50_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000180">
        <property type="protein sequence ID" value="PJN96158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10800" checksum="AC6CC9A4C4883C60" modified="2018-04-25" version="1">MPDQPDDITRLRKASYAFEDLPETISLPQRPGDEPREPLPVAEATVDEIAFAIVEAERESTAAYRRADALKRLYKLAREAGCIGADRAAAAVMKKEGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF72</accession>
    <name>A0A2M9PF72_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1 2">Hypoxanthine phosphoribosyltransferase</fullName>
            <ecNumber evidence="1 2">2.4.2.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">hpt</name>
        <name evidence="4" type="ORF">CNY89_04000</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>diphosphate + IMP = 5-phospho-alpha-D-ribose 1-diphosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:17973"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="ChEBI" id="CHEBI:58053"/>
            <dbReference type="EC" id="2.4.2.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Purine metabolism; IMP biosynthesis via salvage pathway; IMP from hypoxanthine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the purine/pyrimidine phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.8" evidence="1 2"/>
    <dbReference type="EMBL" id="PHNO01000169">
        <property type="protein sequence ID" value="PJN96193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00591">
        <property type="reaction ID" value="UER00648"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0052657">
        <property type="term" value="F:guanine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004422">
        <property type="term" value="F:hypoxanthine phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032264">
        <property type="term" value="P:IMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006166">
        <property type="term" value="P:purine ribonucleoside salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005904">
        <property type="entry name" value="Hxn_phspho_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01203">
        <property type="entry name" value="HGPRTase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 4" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="2" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-0660">Purine salvage</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="3">
        <location>
            <begin position="8"/>
            <end position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU364099"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="20332" checksum="3710EECE31D756E3" modified="2018-04-25" version="1">MSRSYVIDQLISAKAIAARVEELAREITAHFAGTDKLVVIGLLRGSFIFIADLVREIDLPVEVDFLEVSSYGDRTISSREVRILKDLRGKIEGRDVLVVEDIIDTGHTLTRVLEILATRRPARLEVCAMLDKPSRREVEVDARWIGFAIPDRFVVGYGIDYAQRNRNLPYIGSVRFTDEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF88</accession>
    <name>A0A2M9PF88_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">C1q domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000168">
        <property type="protein sequence ID" value="PJN96199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001073">
        <property type="entry name" value="C1q_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008983">
        <property type="entry name" value="Tumour_necrosis_fac-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00386">
        <property type="entry name" value="C1q"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49842">
        <property type="entry name" value="SSF49842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="C1q" evidence="1">
        <location>
            <begin position="107"/>
            <end position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="23658" checksum="521870B01C72DBD1" modified="2018-04-25" version="1">MAISLNAALFAARTVAQGGTGSLWLKLNKEAAGADAGHLFQTNFVTRALAGLFGSNRYRISVSPDGGTFRDAISIDDATGIVDQPRLPRFKASTNFDNVAAADTWIRIAINTAEANEQGAFNAATNRFVAPAAGSYMLGATLLYKISASTNARLRGRLVKNGTVEIPGSFGEISSAHTSLATALWLQTMVTLAQGDTVELQGSFRGAEAYFAANHTSFWGYKVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW1</accession>
    <name>A0A2M9PFW1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptide ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03030</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000120">
        <property type="protein sequence ID" value="PJN96354.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030678">
        <property type="entry name" value="Peptide/Ni-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002741">
        <property type="entry name" value="MppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="2"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96354.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="431" mass="46362" checksum="BDCFA2D18E116160" modified="2018-04-25" version="1" fragment="single">FADVTAMEAVDPQTLKITFAVPKPYPYGPLVGAQSPVLQKAQFADCLGAKAPTCTEANTKPIGTGPFVVTDFKPNDVVTLAANPNYRDPAKPAFATAVIKGGGDPASAARAVLETGEFDYAWNAQVEPEILAAMATAGKGEVISSFGTLVERIHVNQTDPSPSHGETRSTAAHPHPFLTDEAVVKALSLAIDRDILVETGYGAAGKPTCNLVPAPDYAASPNNDWCLKQDMAQANKLLDDAGWAKGSDGVRAKDGVRLSVLYQTSTNSVRQGAQALIKQWWEELGVETELRNIDAAVFFGADPGSPDTLQKFFADVEMYANNFEGADAEKYLGDWTCEQIPRPESQWQGGNTSRFCSEEYEAKLAELAKAAGQDERSALVIELNDMIVNSPSIIPLIHRGRVSTKSNTLEGVKLNSWDSELWNAADWSRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG11</accession>
    <name>A0A2M9PG11_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta-lactamase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000104">
        <property type="protein sequence ID" value="PJN96414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001466">
        <property type="entry name" value="Beta-lactam-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00144">
        <property type="entry name" value="Beta-lactamase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta-lactamase" evidence="1">
        <location>
            <begin position="9"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00144"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="345" mass="36296" checksum="2CDA20D04A8641BA" modified="2018-04-25" version="1">MPPDTVKALDALIAGEMASGNLPSVAVSIHGGGLGVYETAVGAANVGTGAARLLGDPFRIGSVTKAAIATVVLQLAAEKKLALDAPIEAWFPGFPNAGRITVDDLLRMRSGIVDPWDEAALDAFYDDPLHPPGLDEMIARAAARGADFAPPGEATVYSNVNYLMLDRIVSAVEGRPTGEVLADRLFAPLALSATEMPEGPILPGALHGYGWNEGTKAFEDRTELDPGPVGGAGAMVSSAADLSVLVRAICEGELLPPDLQAARMAVEPLEGSPAFVGYGEGVARLGPFCGHNGTIMGFSTEAWRWPERDATIIVNVSRLDRDDQSRSTELFLKIAKLLYPNDLPW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG94</accession>
    <name>A0A2M9PG94_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000081">
        <property type="protein sequence ID" value="PJN96494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7541" checksum="D7AF63B8FBA83228" modified="2018-04-25" version="1">MGATRRSRDAVVREIIAESLAAYPGPCPCPYSVSPRSGRCGGRSAWSKPGGAEPFCFPDDIPKTMIEARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ5</accession>
    <name>A0A2M9PGJ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GguC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000042">
        <property type="protein sequence ID" value="PJN96660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4368" checksum="695DE45507B3DA45" modified="2018-04-25" version="1" fragment="single">MHLSQLKSGGVVVREGGSARLLTGLAAIYALAAEAVAGGAAHRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK9</accession>
    <name>A0A2M9PGK9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01180</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000040">
        <property type="protein sequence ID" value="PJN96671.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96671.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="11108" checksum="3B9E30FC04142D34" modified="2018-04-25" version="1">MGVSPLTIKMAIAYYVSPTSPEQFFTPETWACAPAREARDWLFENDLLYRDETADITHLAPKLAAWVDFICATPLPVQEWRLPEREGARPYRSEPHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS7</accession>
    <name>A0A2M9PGS7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Alpha-hydroxy-acid oxidizing enzyme</fullName>
            <ecNumber evidence="7">1.1.2.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">lldD</name>
        <name evidence="7" type="ORF">CNY89_00885</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.2.3" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000029">
        <property type="protein sequence ID" value="PJN96722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004460">
        <property type="term" value="F:L-lactate dehydrogenase (cytochrome) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd02809">
        <property type="entry name" value="alpha_hydroxyacid_oxid_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012133">
        <property type="entry name" value="Alpha-hydoxy_acid_DH_FMN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000262">
        <property type="entry name" value="FMN-dep_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037396">
        <property type="entry name" value="FMN_HAD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008259">
        <property type="entry name" value="FMN_hydac_DH_AS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01070">
        <property type="entry name" value="FMN_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000138">
        <property type="entry name" value="Al-hdrx_acd_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00557">
        <property type="entry name" value="FMN_HYDROXY_ACID_DH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51349">
        <property type="entry name" value="FMN_HYDROXY_ACID_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0288">FMN</keyword>
    <keyword evidence="2 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FMN hydroxy acid dehydrogenase" evidence="6">
        <location>
            <begin position="1"/>
            <end position="382"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="26"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="79"/>
            <end position="81"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="129"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="131"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="157"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="166"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="253"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="275"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="277"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="280"/>
        </location>
        <ligand>
            <name>glyoxylate</name>
            <dbReference type="ChEBI" id="CHEBI:36655"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="308"/>
            <end position="312"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="331"/>
            <end position="332"/>
        </location>
        <ligand>
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00024042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR000138-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000138-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51349"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="389" mass="42459" checksum="8479DEAA64E2756E" modified="2018-04-25" version="1">MVQNALTIADLKEMARRRVPKMFFDYADSGAWTESTYRANEADFAKVFLRQRVLVDMTNRSLATEMVGEPVSMPVALAPTGICGMQHPDGELLAAKAAEAFGVPFCLSTMSIASIEDVAAHTKRPFWFQLYVMRDRAFVERLIDRAKAAMCSALVLTLDLQILGQRHKDLRNGLSAPPRWTPKHLWQLATRPGWCLGMAHTRRRSFGNIIGHAGDVGDVSSLSVWTKEQFDPRLSWADVEWIKQRWGGKLILKGVLDPEDARRAVESGADALIVSNHGGRQLDGARSSIAALPGIVEAVQGRIEVHMDGGVRSGQDVLKAVALGAKGVWIGRPYLYGLGAGGKAGVTRALEIIRGELDITMALCGRRDIRGIDRAIVDEAATTLPAPIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH31</accession>
    <name>A0A2M9PH31_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Vitamin B12-dependent ribonucleotide reductase</fullName>
            <ecNumber evidence="4 10">1.17.4.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_00080</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9 10">Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>[thioredoxin]-disulfide + a 2'-deoxyribonucleoside 5'-diphosphate + H2O = [thioredoxin]-dithiol + a ribonucleoside 5'-diphosphate</text>
            <dbReference type="Rhea" id="RHEA:23252"/>
            <dbReference type="Rhea" id="RHEA-COMP:10698"/>
            <dbReference type="Rhea" id="RHEA-COMP:10700"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:29950"/>
            <dbReference type="ChEBI" id="CHEBI:50058"/>
            <dbReference type="ChEBI" id="CHEBI:57930"/>
            <dbReference type="ChEBI" id="CHEBI:73316"/>
            <dbReference type="EC" id="1.17.4.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 10">
            <name>adenosylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the ribonucleoside diphosphate reductase class-2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.4.1" evidence="4 10"/>
    <dbReference type="EMBL" id="PHNO01000002">
        <property type="protein sequence ID" value="PJN96869.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050897">
        <property type="term" value="F:cobalt ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004748">
        <property type="term" value="F:ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071897">
        <property type="term" value="P:DNA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02888">
        <property type="entry name" value="RNR_II_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013678">
        <property type="entry name" value="RNR_2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000788">
        <property type="entry name" value="RNR_lg_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013344">
        <property type="entry name" value="RNR_NrdJ/NrdZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029072">
        <property type="entry name" value="YebC-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08471">
        <property type="entry name" value="Ribonuc_red_2_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02867">
        <property type="entry name" value="Ribonuc_red_lgC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75625">
        <property type="entry name" value="SSF75625"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02504">
        <property type="entry name" value="NrdJ_Z"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 10" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="8 10" id="KW-0170">Cobalt</keyword>
    <keyword evidence="7 10" id="KW-0237">DNA synthesis</keyword>
    <keyword evidence="10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ribonuc_red_2_N" evidence="13">
        <location>
            <begin position="31"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="domain" description="RIBORED_LARGE" evidence="12">
        <location>
            <begin position="198"/>
            <end position="746"/>
        </location>
    </feature>
    <feature type="domain" description="RIBORED_LARGE" evidence="12">
        <location>
            <begin position="807"/>
            <end position="911"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1088"/>
            <end position="1114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00014409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU364064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02867"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF08471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN96869.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="1221" mass="132475" checksum="03706E3594E721F3" modified="2018-04-25" version="1">MKFERRFTTEDTGAYGALAFRATASEIRNPDGSIVFRLADIEVPEGWSQVASDVLAQKYFRKAGVPAALKRVKEKGVPEFLWRSVPDEAKLAALPEEERIVGETRATQVFDRLVGAWTYWGWKGGYFSSEADARVYHDEMRYMLAAQMAAPNSPQWFNTGLHWAYGIDGPGQGHYYVDFQTGVLTKSTSAYEHPQPHACFIQSVSDDLVNDGGIMDLWTREARLFKYGSGTGTNFSSLRGINEPLAGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVICDMDHPDIEAFINWKVVEEQKVASLVAGSKIHRERLSALLDAIRAWDGAEEDAFDPKANAGLKAAIRAAKKSHVPDAYIKRALQQAQSGMDAADFATYDTDWDSEAYLTVSGQNSNNSVRVTDAFLKAVREDGDWQLTRRIDGKAARTLKARKLWDDIGHAAWACADPGVQFHDTINAWHTCPADGPIRGSNPCSEYMFLDDTACNLASMNLLAFLKDGRFDAKAYVHATRLWTVTLEISVLMAQFPSPEIARLSYEFRTLGLGYANIGGLLMTMGHGYDSPEGRALCGALTAVMTGASYATSAEMAAELGAFPGYGRNAASMLRVMRNHRRAATGALTGYEGLAVPPVALDHANCPDPQLLNLAESLWDKALELGEAHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPAALTGLGYKPAEIEEIIAYALGHGSLGNAPAINRTSLIGHGFGPAEIEKIEAALPTAFDIRFVFNQWTLGEEFCTQVLGIPEEKLRDPAFDLLRSLGFTRAQVEAANTHVCGAMTLEGAPHLRPEHYVVFDCANPCGKLGTRYLSVESHIRMMAAAQSFISGAISKTINMPNEASVDDCKAAYELSWSLGVKANALYRDGSKLSQPLSAALIEEDDDLEEALIEAPQSERAAVFAEKIVEKIVIREIERVNRQRLPERRKGYTQKAMVGGHKVYLRTGEYQDGRLGEIFIDMHKEGAAFRAMMNNFAIAVSVGLQYGVPLEEFVDAFTFTRFEPAGMVQGNDSIKSATSIIDYIFRELAVSYLDRTDLAHVQPTGESFDTVGRGAGDKPTPVEARPETPRTSLEMIRQVSSTGYLRKRLPQELVLLQGGAGVSGALGFDGSLSGIVTQATGTYAASVSVSGSAVDPRAKARLQGYEGDPCGECGNFTLVRNGTCLKCNTCGGTSGCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4B9</accession>
    <name>A0A2M9P4B9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DEAD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004698">
        <property type="protein sequence ID" value="PJN92387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DEAD" evidence="1">
        <location>
            <begin position="14"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7584" checksum="0807CE9D2669CD1D" modified="2018-04-25" version="1" fragment="single">GATPEGRRTLMVSATTVVIDEADDMLDLGFRAELDALLGATPEGRRTLMVSATTVVIDEADDMLDLGFRAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U2</accession>
    <name>A0A2M9P4U2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004227">
        <property type="protein sequence ID" value="PJN92528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4238" checksum="D529527FF4313B90" modified="2018-04-25" version="1" fragment="single">MPRHANAALKMRPVKTDRNDAAGLAQIMRTGWFKEVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X6</accession>
    <name>A0A2M9P4X6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_28290</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the ExbD/TolR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004016">
        <property type="protein sequence ID" value="PJN92597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015031">
        <property type="term" value="P:protein transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003400">
        <property type="entry name" value="ExbD"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30558">
        <property type="entry name" value="PTHR30558"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02472">
        <property type="entry name" value="ExbD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0653">Protein transport</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="45"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005811"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN92597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8345" checksum="5DA7E7D036959991" modified="2018-04-25" version="1" fragment="single">MAGSLDTRSSGEEMEENHEINVTPFIDVMLVLLIIFMIAAPLATRAPSPARRSRAMAGSLDTRSSGEEMEENHEIN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z0</accession>
    <name>A0A2M9P4Z0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_28380</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004045">
        <property type="protein sequence ID" value="PJN92590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9612" checksum="2FC9B0CBD9E4F7B4" modified="2018-04-25" version="1" fragment="single">PVVIFDALRVKIRDKDSRIVKNKAVYLALGIDGDGEREVLGLWIAENEGAKFWLSVMTELRNRGVQDILIAVVDGLKGFPEAITAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P588</accession>
    <name>A0A2M9P588_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_27475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TrbL/VirB6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003748">
        <property type="protein sequence ID" value="PJN92690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030255">
        <property type="term" value="P:protein secretion by the type IV secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007688">
        <property type="entry name" value="Conjugal_tfr_TrbL/VirB6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04610">
        <property type="entry name" value="TrbL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="34"/>
            <end position="52"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8507" checksum="FA2F399F597114E0" modified="2018-04-25" version="1">MRLGGVVALAFLGINVMMQWVPLRVTDFAKWGVRYLIILAVATSWAQFLPFYDMLTNVPSSIAPRSSRHRRTRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P591</accession>
    <name>A0A2M9P591_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003666">
        <property type="protein sequence ID" value="PJN92724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10717" checksum="EA2B1B78605C4EFA" modified="2018-04-25" version="1" fragment="single">VRDSAGRSTTAERFASLGHRDTVMLLADPQLRPVSTLLETSIWEASICTIQSADFRNFAHGRHGWLHHRADETLVLALTTKDTREVWAPLGAALPPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P599</accession>
    <name>A0A2M9P599_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003732">
        <property type="protein sequence ID" value="PJN92695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="2"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10418" checksum="F69D994218101303" modified="2018-04-25" version="1" fragment="single">VAAMKPWLEKQLSQLSSGSKLAEHIRYTLGAWGGLIHFLDDGRLELDTNSIENLIRPVALTRKNSLFAGHEIGAEHWALLASLVATCKLNGVEPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A9</accession>
    <name>A0A2M9P5A9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polyamine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003702">
        <property type="protein sequence ID" value="PJN92710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TOBE_2" evidence="1">
        <location>
            <begin position="47"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10827" checksum="E4ACD87D95B8B462" modified="2018-04-25" version="1" fragment="single">MGSVTIFEGRVSEDEPEYIRIDCPEIGGTIHVGHGVTCTLDQKVWYAIRPEKMRLTRERPEGAFNLFSAVVEDIGYLGDISVYRLRLPTGKLVSATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C3</accession>
    <name>A0A2M9P5C3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003652">
        <property type="protein sequence ID" value="PJN92729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022441">
        <property type="entry name" value="Para_beta_helix_rpt-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03804">
        <property type="entry name" value="para_beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="4"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11145" checksum="E8A3661904656CC9" modified="2018-04-25" version="1" fragment="single">YHRNILIENNYIHSTNKLGITVAHGDGVVIRNNTVLHNDDMGFNSVPLINVSLLSRNVDIIGNTVYSVQKCGEFFLGGSRQHCRRPFQKSLGRHLQEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H2</accession>
    <name>A0A2M9P5H2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chemotaxis protein MotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26790</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003540">
        <property type="protein sequence ID" value="PJN92765.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92765.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6719" checksum="649D50EA072F1641" modified="2018-04-25" version="1" fragment="single">MFSQDVLAQDATGRLGGPDEAADESLWDLENRLRGASGDAVAADPLLRHIRTRLTDEGLIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I7</accession>
    <name>A0A2M9P5I7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003426">
        <property type="protein sequence ID" value="PJN92802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005498">
        <property type="entry name" value="T4SS_VirB10/TraB/TrbI"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03743">
        <property type="entry name" value="TrbI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7432" checksum="DB6C91F51A647CA0" modified="2018-04-25" version="1">MISIFALGPQFAIDDETDEDVADAIDAMGGDLESTSRSALDAYLRIPPTINVDQGDRLTIFVNRDLVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M2</accession>
    <name>A0A2M9P5M2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003361">
        <property type="protein sequence ID" value="PJN92823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="29" mass="3492" checksum="11E800E402184473" modified="2018-04-25" version="1">MYQQTVSFRRRPLESDFFSNLISIVIQCI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P1</accession>
    <name>A0A2M9P5P1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_25775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003218">
        <property type="protein sequence ID" value="PJN92871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="6">
        <location>
            <begin position="49"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7281" checksum="1D2D930606AAB22A" modified="2018-04-25" version="1" fragment="single">MTDERMALIELVEKAADADLVREMLAFAAERIMDAEAEMLTGAAKGARTALRENHRNGYRERDW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P618</accession>
    <name>A0A2M9P618_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">16S rRNA (Guanine(527)-N(7))-methyltransferase RsmG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002928">
        <property type="protein sequence ID" value="PJN92986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008649">
        <property type="term" value="F:rRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003682">
        <property type="entry name" value="rRNA_ssu_MeTfrase_G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR31760">
        <property type="entry name" value="PTHR31760"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02527">
        <property type="entry name" value="GidB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12959" checksum="14195B1815EC6DCE" modified="2018-04-25" version="1" fragment="single">MIATLARADMPDVKVTLVESDARKCAFLAEAARAMDIQPLIRAERIESIPPLEADVISARALAPLEILVEYVTKHRRPDGIGLFPKGEAVHKEIEAAARRWRFEYRIHPSVTESQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P665</accession>
    <name>A0A2M9P665_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002829">
        <property type="protein sequence ID" value="PJN93023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="18"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="78"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14385" checksum="5D1528A769E152C1" modified="2018-04-25" version="1" fragment="single">ARLCGRPGVHSESFGLPLFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQLSFETFLVYGAFCVMGFQMFFYIYSDRFPLNYLFAAFIAFMTALAISTSSLLTMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B8</accession>
    <name>A0A2M9P6B8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002630">
        <property type="protein sequence ID" value="PJN93096.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93096.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="13830" checksum="D840A592BDE49897" modified="2018-04-25" version="1" fragment="single">GSPAVRSKTSLDPSVVSPPIYDTAPLAIPVLQAGQAVVMQIPWYPPDPVPFGSQGFSLLARIETSTTPPYGMRTAEGATVSTNIRNNNNIARRNITVLPATAGTGTPEAATATLSNEFSTTQAVHDAGGGGGGRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E2</accession>
    <name>A0A2M9P6E2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arsenical-resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_23850</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002648">
        <property type="protein sequence ID" value="PJN93085.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015103">
        <property type="term" value="F:inorganic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004706">
        <property type="entry name" value="Arsenical-R_Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43057">
        <property type="entry name" value="PTHR43057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="70"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93085.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13287" checksum="96B228840435DB7F" modified="2018-04-25" version="1" fragment="single">MSVFERYLTVWVGLCIVVGVALGHVLPGVFQAIGAVEYANVNIPMAALIWLMIIPMLVRIDFASLGKVGAYWRGIGVTLFVNWAVKPFSMALLGWLFIGYLFRPWLPADQIDSYIAGLII</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E8</accession>
    <name>A0A2M9P6E8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_23445</name>
        <name evidence="3" type="ORF">CNY89_27635</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003803">
        <property type="protein sequence ID" value="PJN92674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002541">
        <property type="protein sequence ID" value="PJN93126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="5"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="10126" checksum="CE83398EFB6E0698" modified="2018-04-25" version="1" fragment="single">MKYRREVDGLRTIAVLPVILFHGGFAAFSGGFVGVDVFFVISGYLITFLIIDEIGEGRFSIRRFYERRARRILPALFFVMLTCVPFAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q6</accession>
    <name>A0A2M9P6Q6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22600</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002329">
        <property type="protein sequence ID" value="PJN93223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16621" checksum="B0BA8A92120051F3" modified="2018-04-25" version="1" fragment="single">PRPALTRRAKAPYDVVIAGAGFAGAVLAERLAAASGKRVLLCDRRSHVGGNAYDEHDAAGLLIHRYGPHIFHTNSDEVVAYLSRFTDWRPYEHRVLADLGGGLRLPMPINRTTLAGIFPRRAFPVFRMKRSRPSGGAERTRADHPEFRPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q8</accession>
    <name>A0A2M9P6Q8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002313">
        <property type="protein sequence ID" value="PJN93232.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93232.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7315" checksum="3EC5BD924C8AC811" modified="2018-04-25" version="1">MAIVERDFNTEDLHPIDIVESLAEERSWDFDRIADDQIAMAIEGAWSTIPSPWPFRRARRPCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R5</accession>
    <name>A0A2M9P6R5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22690</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002348">
        <property type="protein sequence ID" value="PJN93209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014916013" evidence="2">
        <location>
            <begin position="23"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="130"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16252" checksum="FEF17397661445BD" modified="2018-04-25" version="1" fragment="single">FSMRIVAVALVGACVVAGSTEAATFYYVGGVYDFANVRGEPAPKFATGVMEIDEDRLPEGQGLANLEVNFDYEEVDGALVTTPTYLSLRVNNQRIRLVGTNWREYGAIEVGSHMTFGVNGMPSSWQIRSTPEGPGFFGSEGKGSDSWLWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P774</accession>
    <name>A0A2M9P774_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">TetR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21075</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001963">
        <property type="protein sequence ID" value="PJN93401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001647">
        <property type="entry name" value="HTH_TetR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036271">
        <property type="entry name" value="Tet_transcr_reg_TetR-rel_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013573">
        <property type="entry name" value="Tscrpt_reg_YcdC_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08362">
        <property type="entry name" value="TetR_C_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00440">
        <property type="entry name" value="TetR_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00455">
        <property type="entry name" value="HTHTETR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48498">
        <property type="entry name" value="SSF48498"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50977">
        <property type="entry name" value="HTH_TETR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH tetR-type" evidence="2">
        <location>
            <begin position="15"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="1">
        <location>
            <begin position="38"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50977"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14024" checksum="F92AE55B064E9837" modified="2018-04-25" version="1" fragment="single">MTRAASRPNPTPNQKAKAEAILEAALGVFAAQGFRGATLDQIAEAAGLSKPNLLYYFASKEAVHRALLDRLLHRWLAPLQAIDPSGDPQAEIRGYVARKLAMAQDFPRESRLFADEMLQGAPRLGDVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B9</accession>
    <name>A0A2M9P7B9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20845</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001910">
        <property type="protein sequence ID" value="PJN93432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13536" checksum="3E4CA5BE1BAF029A" modified="2018-04-25" version="1" fragment="single">SSAASLLDGEVELKFLGDVTRKLRHQPIVPIPPEQRGGPEVVRLGRPGNSSVTLIRSWPKPPKSMLPLRVDVIQSLPASALIVWLSAVARSRSFPTLGVVENAIVEIPLLQAGAWFPQTRSVNDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D8</accession>
    <name>A0A2M9P7D8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20680</name>
        <name evidence="1" type="ORF">CNY89_20700</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001879">
        <property type="protein sequence ID" value="PJN93452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001875">
        <property type="protein sequence ID" value="PJN93454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="43" mass="4786" checksum="27FB0542AA0380F3" modified="2018-04-25" version="1" fragment="single">MASMEHPLFTLATRPDRRVLRYAHGAAEIEVTPSVKGLPTIHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J5</accession>
    <name>A0A2M9P7J5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001793">
        <property type="protein sequence ID" value="PJN93512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8969" checksum="6715AB31F3A09660" modified="2018-04-25" version="1" fragment="single">MSISPRRPFEASALAAGFAAVTRDRIGTAQRQAGVLGQMRDLILRALRLQTQTIARSHGAPAQDPRRRAGRLAEEMSSARAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K1</accession>
    <name>A0A2M9P7K1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS1595 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001762">
        <property type="protein sequence ID" value="PJN93536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024445">
        <property type="entry name" value="Tnp_ISXO2-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12762">
        <property type="entry name" value="DDE_Tnp_IS1595"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01126">
        <property type="entry name" value="DDE_Tnp_IS1595"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS1595" evidence="1">
        <location>
            <begin position="1"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="16498" checksum="4A2EBFEECF2EE645" modified="2018-04-25" version="1" fragment="single">RRVVVVLRQRKGRTLPFVVKQEADGVEIIRQRVALGTVLHADEGTHWDNVEAAYDTFRINHSLAYSLDGACTNQAESYFSRLRRAVVGQHHHVSKQYLHQYATEAAWREDNRRSDNKAQHVAVLGAALHSPVSRNWKGYWQRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y2</accession>
    <name>A0A2M9P7Y2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Allantoin permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_19435</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the purine-cytosine permease (2.A.39) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001621">
        <property type="protein sequence ID" value="PJN93633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001248">
        <property type="entry name" value="Pur-cyt_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045225">
        <property type="entry name" value="Uracil/uridine/allantoin_perm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30618">
        <property type="entry name" value="PTHR30618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02133">
        <property type="entry name" value="Transp_cyt_pur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11500" checksum="24081B23397C0AA3" modified="2018-04-25" version="1" fragment="single">MTEFTHTITGHDPALYNEDLAPLPPEARSWGWFEIFNVWNNDIQSLFGYTLAASLFLSYGLNGWLTFAAIVVAGFIVMALVNLTGRPSVKYGVPYPVMARVAMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y6</accession>
    <name>A0A2M9P7Y6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001587">
        <property type="protein sequence ID" value="PJN93661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7936" checksum="12E27026C69238C4" modified="2018-04-25" version="1">MLGRFEHGTKPMGDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLLSVEAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P813</accession>
    <name>A0A2M9P813_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">ATP synthase F1 subunit epsilon</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">atpC</name>
        <name evidence="12" type="ORF">CNY89_19155</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Produces ATP from ADP in the presence of a proton gradient across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the ATPase epsilon chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001568">
        <property type="protein sequence ID" value="PJN93677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045261">
        <property type="term" value="C:proton-transporting ATP synthase complex, catalytic core F(1)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd12152">
        <property type="entry name" value="F1-ATPase_delta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00530">
        <property type="entry name" value="ATP_synth_epsil_bac"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001469">
        <property type="entry name" value="ATP_synth_F1_dsu/esu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020546">
        <property type="entry name" value="ATP_synth_F1_dsu/esu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036771">
        <property type="entry name" value="ATPsynth_dsu/esu_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13822">
        <property type="entry name" value="PTHR13822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02823">
        <property type="entry name" value="ATP-synt_DE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51344">
        <property type="entry name" value="SSF51344"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01216">
        <property type="entry name" value="ATP_synt_epsi"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="7 9" id="KW-0139">CF(1)</keyword>
    <keyword evidence="5 9" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ATP-synt_DE_N" evidence="11">
        <location>
            <begin position="5"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="91"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="10">
        <location>
            <begin position="100"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004170"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005712"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023196"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF02823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN93677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17278" checksum="EE3ED72C1CBF4042" modified="2018-04-25" version="1" fragment="single">MAETLHFELVSPERKLVSTAATQVQIPGAAGDFTAMPKHAPFLTTLRPGVVKVVGEKGVEEFVVTGGFAEVSPTSATILAELAVPKGEGDRDMIATLVASRRRRRRRPRRKAGRRRTSSCGTPSNWPPSSGPEAPDRGGLSGAVLRGRALFRACRSGRDGSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G1</accession>
    <name>A0A2M9P8G1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001419">
        <property type="protein sequence ID" value="PJN93826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11953" checksum="1B696C34D692042E" modified="2018-04-25" version="1">MKVSPDLRLRNSHWILPAAAQPDILPLAHYRFTPDLQRRIPSALASRAYAMESKAYVVYDAILDRLERDGGSFLFEGSRRFETPADFYAAGAAVDGAPALDANRRTGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H0</accession>
    <name>A0A2M9P8H0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cytochrome P450</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18090</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the cytochrome P450 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001410">
        <property type="protein sequence ID" value="PJN93842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.630.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001128">
        <property type="entry name" value="Cyt_P450"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002397">
        <property type="entry name" value="Cyt_P450_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017972">
        <property type="entry name" value="Cyt_P450_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036396">
        <property type="entry name" value="Cyt_P450_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00067">
        <property type="entry name" value="p450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00359">
        <property type="entry name" value="BP450"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48264">
        <property type="entry name" value="SSF48264"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00086">
        <property type="entry name" value="CYTOCHROME_P450"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0349">Heme</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12987" checksum="60FA1E34D38D1852" modified="2018-04-25" version="1" fragment="single">PYFFRSCEQAVVLSGGTDHARAVEPGTIVFALTHAAMFDSTVFSDPEVFDPTRPPSAMFHFGLGIHECLGAAIGYVMIPEIVRQCLRLEDLEAEGPVDYRGGPVPEFYPIRWRTNGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J9</accession>
    <name>A0A2M9P8J9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">tRNA 2-thiouridine(34) synthase MnmA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001401">
        <property type="protein sequence ID" value="PJN93850.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93850.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="4913" checksum="156D95DC5EB175CE" modified="2018-04-25" version="1" fragment="single">PKPARLFPAPGGATVELLDAEEGVSPGQACVFYDGDRVLGGGWIQRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L5</accession>
    <name>A0A2M9P8L5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">MlaD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17805</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001373">
        <property type="protein sequence ID" value="PJN93887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003399">
        <property type="entry name" value="Mce/MlaD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02470">
        <property type="entry name" value="MlaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="domain" description="MlaD" evidence="3">
        <location>
            <begin position="39"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="25417" checksum="7E8A87300DE26574" modified="2018-04-25" version="1">METKANYVLIGAVTLAGIVGSLMFFLWFAHLSLDRRYDYYDILFDQVSGLSNAADVQFNGITVGRVTDISIHPDDAARVRVRIEVDATTPIRSDTIATLQAQGVTGVSFVSLSGNEADAPPLEPDPKTGVPIIPSRPSTLDSLLQTAPELLREARDLLKGLSAFTGEENQQRVSTILDNLATASAGLETAIADISNVAGSVREGVGQIAGFTGRARATACCSPSSSGTAPISRRCGPSPGPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q5</accession>
    <name>A0A2M9P8Q5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001365">
        <property type="protein sequence ID" value="PJN93899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="45"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7611" checksum="680D4A527694E387" modified="2018-04-25" version="1" fragment="single">LFLSWNVATLTIFSKLTGHKGWAITGWAPSLIRMRAAIEEAVADRARRRDKRHAGAVMDDDEEEGEAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V1</accession>
    <name>A0A2M9P8V1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein ParA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001311">
        <property type="protein sequence ID" value="PJN93954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="111"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="30588" checksum="2CF3BC1356AA6B85" modified="2018-04-25" version="1" fragment="single">MFTHSDLASLQAQSLKMQGWIRRQTFSPENEKTLRRFSSWEVSELVFKVNQSTFRGRLAAEPGLPAGEVEEDGRQRWFSLDEINDLRRRMKINRQSLMPPRPKGKRALRAAIANFKGGAGKSTVALHFAHAAALDGYRVLCVDFDPQATLSHSMGLTDVSEEHTVWGILARDLIHETDRMNAGPRGAQSGAALPQRRLPASIRGLGLAELRVGDFLKSTAWSTIDIIPSCANAAFVEFASAQYRHVNPEWSFFAAVSRYLDALPDDAYDLIIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W5</accession>
    <name>A0A2M9P8W5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001296">
        <property type="protein sequence ID" value="PJN93977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="26"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="12271" checksum="75B2AD532B1E412F" modified="2018-04-25" version="1" fragment="single">MAEHLLEVRNLSVRFHTAAGTVNAVRDISWHLDRGETLAILGESGSGKSVSASAIMNLIDMPPGEITQGEVLFDGRDLLKMSRASRRQINGKRISMIFQDPLSHLNPVYTVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X2</accession>
    <name>A0A2M9P8X2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001290">
        <property type="protein sequence ID" value="PJN93982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="7950" checksum="E4D620D8479307F0" modified="2018-04-25" version="1">MPGYGMAIFATPSAMAALDGMLDRASFEIAMGKGPVVAVEWTGGAATRAWLRKRIGKKAGGRGPWWSRRTSPGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P930</accession>
    <name>A0A2M9P930_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Lipoprotein-releasing system transmembrane subunit LolC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_16980</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001263">
        <property type="protein sequence ID" value="PJN94019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005615">
        <property type="term" value="C:extracellular space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013858">
        <property type="entry name" value="Peptidase_M10B_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08548">
        <property type="entry name" value="Peptidase_M10_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0449">Lipoprotein</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="160"/>
            <end position="184"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="205"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="269"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M10_C" evidence="9">
        <location>
            <begin position="11"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="8">
        <location>
            <begin position="189"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF08548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="32244" checksum="B8FFB3C5DB4F01EC" modified="2018-04-25" version="1" fragment="single">FNALQYGNDTRSLIEAAIGGSGNDTMIGNVADNEGIALGVGVAQELGVSVGDVVTLISPQGMETPFGTQPRIVDYEVVYVFGVGRYDIDRTRVYLGLEAAQSFFDREGGADEIAVTVADPSQVDELRAGLLAAAGDRGAIWTWRDASGSFLDALDVERRVMFIILSLVVLIAAMNIISGLVMLVKNKGRDIGILRTMGLTSGSIMRVFFLCGAGIGVTGTVLGVILGCLFAYYIQDIQAVVEWVSGGSVWNPEIRFLTEIPSRLRWGDVAAVAGMALGLSFLITLAPARNAARLSPVEALRHE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H5</accession>
    <name>A0A2M9P9H5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sodium-independent anion transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001132">
        <property type="protein sequence ID" value="PJN94197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="14"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="2">
        <location>
            <begin position="69"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="194" mass="21344" checksum="4D2239AE62396C8F" modified="2018-04-25" version="1" fragment="single">GVLRRAWSYSRADFAAVAVTIAVTLGVGVEAGVSAGVALSVLLFLWRTSRPHIAEVGRVPGTEHFRNILRHRVETDPRVLTIRVDESLYFANARYLEDYILDRAAGCPDLRHVVLLCSAVNDVDMSALESLEAIDHRLRSMGVMLHLSEVKGPVMDKLRRTPLIERLSGSVFLSQHDAIAALTGDPSWPFSQTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q1</accession>
    <name>A0A2M9P9Q1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Spermidine/putrescine ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15505</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001081">
        <property type="protein sequence ID" value="PJN94268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019808">
        <property type="term" value="F:polyamine binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015846">
        <property type="term" value="P:polyamine transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001188">
        <property type="entry name" value="Sperm_putr-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00909">
        <property type="entry name" value="SPERMDNBNDNG"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014683375" evidence="4">
        <location>
            <begin position="20"/>
            <end position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="343" mass="37480" checksum="A29386375429F612" modified="2018-04-25" version="1">MMKLTLGALLGLVAPMAMADEIRVLNWQGYGTDLDWAVAAFQEKTGTTVVHEYFTSEQELLTKLRTNPGAYDVVMINSAFTAQAVEEGLIGPIDRAAIPHLSDLDPVFLDNPDLNAGGALHGVPWTWGLTAFAVNSNDFPEPPASLAVFWDPEWKGRVSIRDDALEAVQFAALATGQDINDIRDLDAVKGELETLMPQIRAFWSSENDWNQFMAAGEIAVATYWSGSAARSLDKGLPITFVVPEEGAIGWVDGLSIPTASTHKAQAAAFIDWMIDPEFYVRWDAEGSPAPTSLKAAEALPETSFNRMVLGDPEVVALVQFMRPVPDAKREEYLALWQGLKAKQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S9</accession>
    <name>A0A2M9P9S9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001062">
        <property type="protein sequence ID" value="PJN94297.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94297.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="35003" checksum="CF2F520E1EF10B8D" modified="2018-04-25" version="1" fragment="single">GACTRGIYDNMKTAVDTILVGKDRAYNRRFQQMCGHYLVEPVACTPASGWEKGQVENQVGTVRQRFFSPRVRVRSYDELNAWLLDRCIAWAKAQPHPDVRDKTIWQMFEAERPSLVPYAGPFDGFHATPVSPSKTCLVRFDNNKYSVMASAVGRPVELRAYADRIELRQDGRVVGRHRRAFGRGETVYDPWHYVPVLARKPGALRNGAPFQDWVLPAALERVRRKLKAAPDGDRQMVEVLGAVLTDGLSAVEAACIEALREGVHSADVILNILSRRRDPGPPATITTPEALRLRHEPVADCARYDSLRRTSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U6</accession>
    <name>A0A2M9P9U6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_15315</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the DEAD box helicase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001060">
        <property type="protein sequence ID" value="PJN94302.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003724">
        <property type="term" value="F:RNA helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000629">
        <property type="entry name" value="RNA-helicase_DEAD-box_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014014">
        <property type="entry name" value="RNA_helicase_DEAD_Q_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00039">
        <property type="entry name" value="DEAD_ATP_HELICASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51195">
        <property type="entry name" value="Q_MOTIF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 6" id="KW-0347">Helicase</keyword>
    <keyword evidence="2 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Q_MOTIF" evidence="10">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase ATP-binding" evidence="8">
        <location>
            <begin position="23"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="domain" description="Helicase C-terminal" evidence="9">
        <location>
            <begin position="230"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="368"/>
            <end position="391"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Q motif" evidence="5">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00552"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94302.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="391" mass="43217" checksum="E113D9795A1F8C1A" modified="2018-04-25" version="1" fragment="single">PRVLSAVIDAGYTDPTPIQIQAIPSALEGRDVLGIAQTGTGKTAAFVLPMIHHLSKGRARARMPRSLVLCPTRELAAQVAENFEKYAKNVRLSMALLIGGVSFKDQDKLIDRGVDVLIATPGRLLDHFERGKLMLTGVNIMVVDEADRMLDMGFIPDIERIFKLVPFTRQTLFFSATMAPEITRITEEFLHNPVRVEVARQATTSETILQAVVKHTPRRKDTGASEKREVLRRLIVSEGEALTNGIIFCNRKIDVDVLAKSLKKHGFDAAALHGDLDQKLRMKILQAFRDGELKLLIASDVAARGLDIPNVSHVFNFDVPIHSEDYVHRIGRTGRAGRSGKSITLALPHEQKYLDKIEELVKKPIPLMESPLAGGPAAVEPEPVEERSSSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X6</accession>
    <name>A0A2M9P9X6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15205</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001049">
        <property type="protein sequence ID" value="PJN94321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035596">
        <property type="term" value="F:methylthiotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12160">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013848">
        <property type="entry name" value="Methylthiotransferase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038135">
        <property type="entry name" value="Methylthiotransferase_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00919">
        <property type="entry name" value="UPF0004"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51449">
        <property type="entry name" value="MTTASE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MTTase N-terminal" evidence="6">
        <location>
            <begin position="6"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51449"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10818" checksum="351C3587495BE180" modified="2018-04-25" version="1" fragment="single">MTASQKKVFVKTYGCQMNVYDSERMAAALAAEGYGATETPEQADLILLNTCHIREKAAEKVYSELGRLRLLKADRPSLRIGVAGCVAQAEGAEMIARAPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA35</accession>
    <name>A0A2M9PA35_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14715</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001001">
        <property type="protein sequence ID" value="PJN94405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="30"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11792" checksum="44941F588E862086" modified="2018-04-25" version="1" fragment="single">MTLPLSAETDAAALLAVQERRRKASLAVRYAILTLVGFVMLYPLIWLIGASFKTNAEIFQSPGFLPADPTIQGYIDGWRTSTPYTFARFFWNTFLIIAPKTLFTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA56</accession>
    <name>A0A2M9PA56_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14735</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001003">
        <property type="protein sequence ID" value="PJN94401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="98"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="227"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="25621" checksum="B0BAF6D06D26C177" modified="2018-04-25" version="1">MPDSAWLILAALGAGILNTIAGGGTFLTFPALVFIGVPPVMANATSAVAVFPGYLGGALGFRKELQAFDRPTLLRLVVITLAGGLAGSLLLLVSSNEAFSLVVPFLLLAATLVFLLGDRIRVWAAKHSRSVTPFGAAGLFATSVYGGYFNGGLGIVLLALFALWGMTNIHAMNGLKTALSFALSAISVVTFAAAGIVAWPQAIIMMVASTVGGYLGAPIARALPIKVVRGIVAAVGFGMSLIFFVRLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA68</accession>
    <name>A0A2M9PA68_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000992">
        <property type="protein sequence ID" value="PJN94419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12974" checksum="78B93523976E1BD0" modified="2018-04-25" version="1">MNGFDRLKGQLIDAVKSRVAGDRHPRLPEAGTLFWNAFCDLCATRTYHASGPNPIAYAEIEAWTRVRRRPLEPRHVELILAMDQAWIDASASARKRGGKAIEPVGGPLTPAFFDAVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG9</accession>
    <name>A0A2M9PAG9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CobW C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000920">
        <property type="protein sequence ID" value="PJN94536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011629">
        <property type="entry name" value="Cbl_biosynth_CobW-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036627">
        <property type="entry name" value="CobW-likC_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07683">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00833">
        <property type="entry name" value="CobW_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CobW C-terminal" evidence="1">
        <location>
            <begin position="21"/>
            <end position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13713" checksum="9FB492C303D75334" modified="2018-04-25" version="1">MSAFPEEALTRDAFLGGRLRLWQPRVGYRAAIDPILLDLWAETLIATRGARILRLKGLIWATGFETPFVLHGVQHLLDPLVRLKRWTGGDRRSRVVLIARDVPPEALRDSLDLLRLRPGAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI4</accession>
    <name>A0A2M9PAI4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000912">
        <property type="protein sequence ID" value="PJN94553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5201" checksum="522F665DA9615C54" modified="2018-04-25" version="1" fragment="single">EVLAEAVEADEEPIHAVYLGGPRLPQRVRVFLDFVVPPLQRFLAGEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI6</accession>
    <name>A0A2M9PAI6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000925">
        <property type="protein sequence ID" value="PJN94529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023614">
        <property type="entry name" value="Porin_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="413" mass="45452" checksum="8B6983ED87C052AC" modified="2018-04-25" version="1" fragment="single">GVAPGMQGLLRTPPSPGVAGHPFYGALPDGRETNILATGNQNVRLTFSGQINRALNTVDDGISTDVYQVDNENASSRFRFLGESNALEETQALALFEFEWPVNGSLDVSQLEQSVSDSINRTFNLRLLEVGFSNNTYGSFFIGQGWMASDGTSEMDITGVTTPLWSGQTFAFGGMLPTVNGEDFDYIPRRSTPNREDYASEEEYNQALGDFSVASSNFVNVFTLGNNLDGLSRLVRVRYNTPVWGGFQLSGSAATEDRYDVALRYAGETDWARFVAAGSWWTDASDGGFDGVSGSASLVLKSDRWWNGVGAAVQAAQMSFDDLDNEPTTYMGKLTYVRNFWDIGRTGFALQYSRYEDFYVDGTDYKLYGVGVSQNIDRLGTEVYAGITQNDFTIPNYDVNDMTVYQVGAMVRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN9</accession>
    <name>A0A2M9PAN9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transket_pyr domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_13630</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000888">
        <property type="protein sequence ID" value="PJN94589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023874">
        <property type="entry name" value="DNA_rSAM_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21180:SF9">
        <property type="entry name" value="PTHR21180:SF9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01102">
        <property type="entry name" value="Uncharacterised_Radical_SAM_Su"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <feature type="domain" description="Transket_pyr" evidence="6">
        <location>
            <begin position="207"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="247" mass="27191" checksum="7F2FB45B92361369" modified="2018-04-25" version="1" fragment="single">MDAKLSAKLRILADAAKYDASCASSGAPRRKAGPGGLGSTTGAGICHAYTPDGRCVSLLKILLTNWCLYDCVYCVNRRSSNTPRARFTVEEVVTITLEFYKRNYIEGLFLSSGVVKSPDHTMEEMTRIARTLRRDHGFAGYIHLKTIPEASPWLVEQAGLWADRLSINLELPTDAGLARLAPEKNGTTIRAAMGQTRERIAEARGPVGDFVERRQIMIDQFISSGEAKWLRMSGLVMLLPHGYEGQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV5</accession>
    <name>A0A2M9PAV5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RNA_pol_Rpb1_5 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000842">
        <property type="protein sequence ID" value="PJN94661.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003899">
        <property type="term" value="F:DNA-directed 5'-3' RNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006351">
        <property type="term" value="P:transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007081">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04998">
        <property type="entry name" value="RNA_pol_Rpb1_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA_pol_Rpb1_5" evidence="1">
        <location>
            <begin position="13"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94661.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5605" checksum="62D646EBCB3FCFBB" modified="2018-04-25" version="1" fragment="single">MDLKHERGERRHFDILGIEALADYLIDEVQEVYRLQGVKINDKHIEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW2</accession>
    <name>A0A2M9PAW2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000836">
        <property type="protein sequence ID" value="PJN94677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13678" checksum="F8D12CD657995FF4" modified="2018-04-25" version="1" fragment="single">AARYRGGTARQALPAAVTYERMVTEMADRLLPAFGYGTSLALLPNGPNETPFVSIRTDQPPPSPSSEPPPDEAAPSAPLRPFACVERDMELFSSALLLPADESGSAPVERISVEGFRAALAQLDRPGLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB47</accession>
    <name>A0A2M9PB47_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Magnesium/cobalt efflux protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_12610</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0053 family. Hemolysin C subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000791">
        <property type="protein sequence ID" value="PJN94752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04590">
        <property type="entry name" value="CBS_pair_CorC_HlyC_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044751">
        <property type="entry name" value="Ion_transp-like_CBS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005170">
        <property type="entry name" value="Transptr-assoc_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03471">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM01091">
        <property type="entry name" value="CorC_HlyC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0129">CBS domain</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="72"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="6">
        <location>
            <begin position="139"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="273"/>
            <end position="297"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="297"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006446"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="32251" checksum="AC2F8C445DCECACB" modified="2018-04-25" version="1" fragment="single">MGEMESGAASSGGSDAADADSPARPGFLTRLFRRDVPEDPPHHARDRAASSNGAEIVVNLRRIRRMRVEEVSTPRAEIVAVPEDIPLSDLVEVFQANSMSRLPVYAGELDHPKGLVHFKDFALRYGFGAEAGAFDLESLLRPLLYVPPSMPIGVLLRKMQADRIHMALVIDEYGGVDGLVTIEDLIEEIVGEIDDEHDDEALVLLEEEDGVFAVPGRMDLDDFEEATGVRLADPELAEEVDTLGGLLFRLAGRVPAAGEEVAHPDGHVFEVIDADSRRGEPAAGAAEASGDRRSRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC2</accession>
    <name>A0A2M9PBC2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GAF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000750">
        <property type="protein sequence ID" value="PJN94825.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01590">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAF" evidence="1">
        <location>
            <begin position="75"/>
            <end position="179"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94825.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="30113" checksum="5DFDF015193883A1" modified="2018-04-25" version="1">MTRTLEHIGEIERVVGGGPSTRDPVVVDSWRRCVERYGLDPTRAQEAFILPEAELRSHRQQSEELIAIARSGLEALYAQVAGQNYVLLLGDRSGVAVEFLGDPNFDHRLRKAGLYLGAEWSEPRAGTCAIGACIATGEALTIHQTDHFDLTHTPLSCTAAPIYDTRGEFAAVVDISLLSSPIDKLGQTLALHAVAGTVRRIELANLMAQTRDEWVLRFSRAPEFLDVDPEAAISLDGSGRILGMTHGGAQILARASGVDWRRSDLLLGSGRDRPPDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD6</accession>
    <name>A0A2M9PBD6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Flavin-dependent thymidylate synthase</fullName>
            <shortName evidence="1">FDTS</shortName>
            <ecNumber evidence="1">2.1.1.148</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">FAD-dependent thymidylate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Thymidylate synthase ThyX</fullName>
            <shortName evidence="1">TS</shortName>
            <shortName evidence="1">TSase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">thyX</name>
        <name evidence="3" type="ORF">CNY89_11985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + dUMP + H(+) + NADPH = (6S)-5,6,7,8-tetrahydrofolate + dTMP + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:29043"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:57453"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:63528"/>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <dbReference type="EC" id="2.1.1.148"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
        <text evidence="1">Binds 4 FAD per tetramer. Each FAD binding site is formed by three monomers.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Pyrimidine metabolism; dTTP biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the thymidylate synthase ThyX family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.148" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000729">
        <property type="protein sequence ID" value="PJN94856.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00575"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050797">
        <property type="term" value="F:thymidylate synthase (FAD) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006231">
        <property type="term" value="P:dTMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006235">
        <property type="term" value="P:dTTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01408">
        <property type="entry name" value="ThyX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003669">
        <property type="entry name" value="Thymidylate_synthase_ThyX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036098">
        <property type="entry name" value="Thymidylate_synthase_ThyX_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34934">
        <property type="entry name" value="PTHR34934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02511">
        <property type="entry name" value="Thy1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69796">
        <property type="entry name" value="SSF69796"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02170">
        <property type="entry name" value="thyX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51331">
        <property type="entry name" value="THYX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="1" id="KW-0521">NADP</keyword>
    <keyword evidence="1" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="active site" description="Involved in ionization of N3 of dUMP, leading to its activation" evidence="1">
        <location>
            <position position="223"/>
        </location>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <note>ligand shared between neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="109"/>
            <end position="112"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="112"/>
            <end position="114"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="120"/>
            <end position="124"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="120"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <note>ligand shared between neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="196"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <begin position="212"/>
            <end position="214"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <note>ligand shared between neighboring subunits</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="223"/>
        </location>
        <ligand>
            <name>dUMP</name>
            <dbReference type="ChEBI" id="CHEBI:246422"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94856.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="302" mass="34225" checksum="6FED0156AFEADC3A" modified="2018-04-25" version="1">MSLTPEQQAEIAAARAQQKPTGRAVAPGMEPRLNQAIPVLDHGFLRVVDYMGDDAAIVQAARVSYGAGTRTARDDAGLIRYLMRHWHSTPFEMCEIKLHVKLPIFVARQWIRHRTANVNEISARYSILDREFYTPSPEHLAAQSRVNNQGRGEVLEGPEAARVLDLLRAGAGRSFDDYEAMLSQEGQQGLARELARMTLPASIYTQWYWKVDLHNLFHFLRLRADPHAQYEIRAYADALCEVVRDWVPQAYAAFEDYRLNAVQFSGKAMDCLRRMLAGETVTQETSGMSKGEWREFEAALRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF0</accession>
    <name>A0A2M9PBF0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11920</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000725">
        <property type="protein sequence ID" value="PJN94864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036852">
        <property type="entry name" value="Peptidase_S8/S53_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52743">
        <property type="entry name" value="SSF52743"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="6854" checksum="FE0B6D968885106C" modified="2018-04-25" version="1">MAAPAVTGLVALILAEAARSGRDLDIASLRAHLVAGALRDPPTGPGPAWDPRYGHGRASGASIAERIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH6</accession>
    <name>A0A2M9PBH6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11760</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000710">
        <property type="protein sequence ID" value="PJN94887.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008166">
        <property type="entry name" value="Glyco_transf_92"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01697">
        <property type="entry name" value="Glyco_transf_92"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94887.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="300" mass="33358" checksum="29818729736B97FF" modified="2018-04-25" version="1">MFGAAFNRLWKIGRIGIAPPPPEPDRHGLAIVLIVRNEATHIGEWAAFHRRAGARAFFVYDNGCTDATVPILRDRLGDRLTTVPWRQLFTDGRLGREIHNQALAYAHAVSNFGGAFRWMTFIDADEFLVPRQAADLDGALAHLEGVRNVSLPWHMFGRSGHAEPPAGGVLPNYLRRAADPMSDVRGVRAFKCIVDPCAVTEVGVHSFVTDPAGLTANDQGVTVPLRRRTERGFYSADHLQLNHYYSRSDAELQAKVGRGPNVASKAPEYRRKVLRTVENIEATEVEDRSALEYLARIDQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP2</accession>
    <name>A0A2M9PBP2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cation:proton antiporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11290</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000672">
        <property type="protein sequence ID" value="PJN94966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005451">
        <property type="term" value="F:monovalent cation:proton antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0098662">
        <property type="term" value="P:inorganic cation transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005133">
        <property type="entry name" value="PhaG_MnhG_YufB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34703">
        <property type="entry name" value="PTHR34703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03334">
        <property type="entry name" value="PhaG_MnhG_YufB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01300">
        <property type="entry name" value="CPA3_mnhG_phaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="77"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12370" checksum="1E6C294E7BE9FFB0" modified="2018-04-25" version="1">MSHFADVPIWVAVPVSILIVLGALLTLLGTIGLVRLSSFYARIHAPTLGTSWGAAGVVLASMLLFSATGERPVLHEILLGVFVTITTPVTLMLLGRAALYRDDDREEAKPAEETEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS7</accession>
    <name>A0A2M9PBS7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">C4-dicarboxylate transporter DctA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_11090</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000655">
        <property type="protein sequence ID" value="PJN95000.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95000.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8181" checksum="59C982D8DC6E78A4" modified="2018-04-25" version="1" fragment="single">AATLSVVPAVPVAGMALILGVDRFMSEVRALTNFVGNAVATLVVARWEGELDKDMLDAVLNGQVPVDEEGYPIEVKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU8</accession>
    <name>A0A2M9PBU8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11020</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000649">
        <property type="protein sequence ID" value="PJN95011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="35"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9096" checksum="7B49426E14E2E0D3" modified="2018-04-25" version="1">MPQSSGADERIAAAIGRLRAALDARDAASAPDPDIEGLHARIAQLEQDKAALEDELERLRAKRDKDVAALDELIAQLKPLIEEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY1</accession>
    <name>A0A2M9PBY1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Cell division topological specificity factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">minE</name>
        <name evidence="6" type="ORF">CNY89_10710</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the MinE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000623">
        <property type="protein sequence ID" value="PJN95066.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032955">
        <property type="term" value="P:regulation of division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1070.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00262">
        <property type="entry name" value="MinE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005527">
        <property type="entry name" value="MinE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036707">
        <property type="entry name" value="MinE_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03776">
        <property type="entry name" value="MinE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55229">
        <property type="entry name" value="SSF55229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01215">
        <property type="entry name" value="minE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4 6" id="KW-0132">Cell division</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="106"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="121"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00262"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95066.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14992" checksum="973605B70A4D99D4" modified="2018-04-25" version="1">MDMLSFFRRGRTPATTADTAKERLQILLSHERTDRSSPEYLPQLQRDILEVIERYMNVGGDSVDIKLERGDELSTLEINIELPGARNSRPAGVWLSTSIASAPPIPSPARIGAWKTSAPVDRSSAWLSRSKSATR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC95</accession>
    <name>A0A2M9PC95_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000573">
        <property type="protein sequence ID" value="PJN95170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_5" evidence="1">
        <location>
            <begin position="31"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="14828" checksum="4F81874ACF4D80A7" modified="2018-04-25" version="1" fragment="single">MNAHAPAPPPLYRPVADECAVFEAAHRAGLPLLLKGPTGCGKTRFVEHMAARLALPLFTVACHDDLSAADLIGRYLLRGGETEWVDGPLTRAVRAGGIAYLDEVVEARKDVTVVLHPLTDDRRRLLIDRTGEELAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE2</accession>
    <name>A0A2M9PCE2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptide deformylase</fullName>
            <shortName evidence="2">PDF</shortName>
            <ecNumber evidence="2">3.5.1.88</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Polypeptide deformylase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">def</name>
        <name evidence="3" type="ORF">CNY89_09860</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>H2O + N-terminal N-formyl-L-methionyl-[peptide] = formate + N-terminal L-methionyl-[peptide]</text>
            <dbReference type="Rhea" id="RHEA:24420"/>
            <dbReference type="Rhea" id="RHEA-COMP:10639"/>
            <dbReference type="Rhea" id="RHEA-COMP:10640"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:49298"/>
            <dbReference type="ChEBI" id="CHEBI:64731"/>
            <dbReference type="EC" id="3.5.1.88"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2">Binds 1 Fe(2+) ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the polypeptide deformylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.88" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000557">
        <property type="protein sequence ID" value="PJN95206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042586">
        <property type="term" value="F:peptide deformylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00487">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00163">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023635">
        <property type="entry name" value="Peptide_deformylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036821">
        <property type="entry name" value="Peptide_deformylase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10458">
        <property type="entry name" value="PTHR10458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01327">
        <property type="entry name" value="Pep_deformylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF004749">
        <property type="entry name" value="Pep_def"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01576">
        <property type="entry name" value="PDEFORMYLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56420">
        <property type="entry name" value="SSF56420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00079">
        <property type="entry name" value="pept_deformyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="140"/>
        </location>
        <ligand>
            <name>Fe cation</name>
            <dbReference type="ChEBI" id="CHEBI:24875"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="19273" checksum="14AD61429727FAA1" modified="2018-04-25" version="1">MTLRSILIHPDPRLRKTAEPVTRFDSALRGLADDMLSTMYDAPGIGLAATQIGVMKRVFVMDCAGKDDPPSPLVVVNPELLWVSEEQVASEEGCLSIPDVYEDVVRPARIRLAWTDLDGTPQEQDFADRWAVCAQHELDHLNGKLFIDYLGAVKRTLITSRMKKLKREKARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF7</accession>
    <name>A0A2M9PCF7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000558">
        <property type="protein sequence ID" value="PJN95204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001087">
        <property type="entry name" value="GDSL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00657">
        <property type="entry name" value="Lipase_GDSL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="354"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="354" mass="36280" checksum="7ECE706503C5924C" modified="2018-04-25" version="1" fragment="single">MADIADLVFFGDSLTDQGVLSALTSRTAIVTIPVPSAGYGTAFTNGPTHAQVLAGLLGASSDNYAVGGARAVGSQTLTQYLEPRIGGQVPGLDIYQEDAAQADLDFDINFGGQVQRFLADAATMPAAPGTAAGFFIGLNDYSEFTPTSPETALAEATALVGEVVGNTIEAAAAATLAGVETILFYTMPNFRFFPASTLQTPETLALGDQLVAAHNGALTQGGAFLETLGAEVRFIDLARISDEISADPSSFGLRADLFASPALLTTGGNPTLVERPDGTWAAVFAPNPAVAGVDPGQLAFLDFVHPTASVHAIWGVFSAETLTSETFFRGAGDDVIVGARRDDLVLAGAGDAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI0</accession>
    <name>A0A2M9PCI0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NTP_transf_9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000535">
        <property type="protein sequence ID" value="PJN95246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.170.150.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007361">
        <property type="entry name" value="DUF427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038694">
        <property type="entry name" value="DUF427_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04248">
        <property type="entry name" value="NTP_transf_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NTP_transf_9" evidence="1">
        <location>
            <begin position="16"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="12186" checksum="094D0884562A595C" modified="2018-04-25" version="1">MMDELRIRAAEGTWVVLAGDAVIGESAKALELSEPGLPPVIYFPRDDLAMALLDASETTWTCPVKGQAQHFHVSAINGAIRDAGWSFETPGPEAERIAGHIAFARDKVTLRQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD32</accession>
    <name>A0A2M9PD32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000457">
        <property type="protein sequence ID" value="PJN95422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="141"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="22654" checksum="1C8CB2867FA0E369" modified="2018-04-25" version="1">MEVVDRFKIRFRRRPSAVPTTRQGIVDAIAAGVASGSGPYVIGLAGTIDFGGADMAVSGRHKGGEPIVVKSISRLAPVVIRGIAGHGFSFSQCSSIVLDQIVQDGWRLFRRNGNVLIEGEYGHDPVIYHALAISGIKPNHHPDGSQISTGLPDGWTRPAGARMGGDRNIRRMLGRSCGAGGAIYHGDGYWGGEACRLHDPQLGDPRPDPPSAGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD34</accession>
    <name>A0A2M9PD34_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000453">
        <property type="protein sequence ID" value="PJN95433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="171" mass="19536" checksum="3DD0C64B9BEAF9B3" modified="2018-04-25" version="1">MAAYAGWYVEEGMSDIFVSNPETPLTWTYAGDHLVAGAVTRRIATLWRHVDVEPEFGIGKRFGKQWETEVWGAFFFRWRGFPWDDKLITTVAVSTGMNYATDISDVEQERARDGKGDQWMHFFSPEITFALPSHPDVELLLRLHHRSGVFGLVSDAWGGAQYATIGLRFRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD67</accession>
    <name>A0A2M9PD67_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Cysteine--tRNA ligase</fullName>
            <ecNumber evidence="11">6.1.1.16</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Cysteinyl-tRNA synthetase</fullName>
            <shortName evidence="11">CysRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysS</name>
        <name evidence="13" type="ORF">CNY89_08260</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 11">
            <text>ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)</text>
            <dbReference type="Rhea" id="RHEA:17773"/>
            <dbReference type="Rhea" id="RHEA-COMP:9661"/>
            <dbReference type="Rhea" id="RHEA-COMP:9679"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78517"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.16"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="11">Binds 1 zinc ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3 11">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.16" evidence="11"/>
    <dbReference type="EMBL" id="PHNO01000434">
        <property type="protein sequence ID" value="PJN95480.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004817">
        <property type="term" value="F:cysteine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006423">
        <property type="term" value="P:cysteinyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00672">
        <property type="entry name" value="CysRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00041">
        <property type="entry name" value="Cys_tRNA_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015803">
        <property type="entry name" value="Cys-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024909">
        <property type="entry name" value="Cys-tRNA/MSH_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032678">
        <property type="entry name" value="tRNA-synt_1_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10890">
        <property type="entry name" value="PTHR10890"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01406">
        <property type="entry name" value="tRNA-synt_1e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00983">
        <property type="entry name" value="TRNASYNTHCYS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00435">
        <property type="entry name" value="cysS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="8 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 11 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9 11" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 11" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="tRNA-synt_1e" evidence="12">
        <location>
            <begin position="21"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="11">
        <location>
            <begin position="35"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="11">
        <location>
            <begin position="273"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="215"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="276"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01406"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95480.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="477" mass="53385" checksum="F45E5566688406E7" modified="2018-04-25" version="1">MRPAMDIHLYDTRSRGKVRLSPVRPGRVGMYVCGPTVYDRAHIGNARPVVVFDTLFRLLRQAYGAEAVTYVRNVTDVDDKINARAAESGRTIREITEETVDWYHADMDALGALRPTVEPRATEYIGAMVAMIETLIARGHAYAAEGHVLFSVTSDAQYGTLARRTLEDMRAGARVEVAPYKRDPMDFVLWKPSTPELPGWDSPWGRGRPGWHIECSAMAHQLLGESFDIHGGGIDLAFPHHENEAAQSRCAHPTGEFARIWMHNGFLNVEGEKMSKSLGNFFTVRDLIDRGVPGRVIRFVLLSTHYRQPMDWTERKATETEERLRRWHAEIRFYVDPSDIDETRVSPEILRALADDLNSPLAISLLDPAGARQQDPGARWLQLAHDLKFLGLLDEAALAAEGATWVDPMSRLETSVQARIQAIVDSRLAAKKLREFARADSLRDQLVAAGVVVNDSRDGTSWELGPGFDPSKLEGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE0</accession>
    <name>A0A2M9PDE0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATPgrasp_ST domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000404">
        <property type="protein sequence ID" value="PJN95549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039523">
        <property type="entry name" value="RimK-rel_E_lig_ATP-grasp"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14397">
        <property type="entry name" value="ATPgrasp_ST"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPgrasp_ST" evidence="1">
        <location>
            <begin position="161"/>
            <end position="345"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="365" mass="41072" checksum="D98B26FEB26404E9" modified="2018-04-25" version="1">MAATAPWKTLPKRVIDRAHRFTKAEARARWVRWDVDRHMAKLVANTDAKAPSAAELRRIRDYARERFGSAAHAPWLEFYAAYRGRFVEGWVPEDFIQGVAMPYLNGSYHKLCQARTLQWRLLGSDSLPDLAHFVGGEWFDLDGARLERGRLRDLLFAGRERVCVKTEQSIWGRGVSFATPERFDLAAIEAQGNLVVQSALVQGDWFARVFPGAVTTVRIATGKLPGKRPHLVGAFLRIGHGAAQNVDGNSLDLPILDAGGRLNPFAVAQDWTRLPAHPDTGFRFEGEAAPDFERAVGHCLGLHDRLPQFGFVGWDVVIDDQDRVQVMEFNTAHPETRLLEMAVGPCFEPYRMEQYQGRAIKDVWA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE7</accession>
    <name>A0A2M9PDE7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_07685</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000394">
        <property type="protein sequence ID" value="PJN95570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003838">
        <property type="entry name" value="ABC3_permease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005891">
        <property type="entry name" value="DevC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02687">
        <property type="entry name" value="FtsX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF031773">
        <property type="entry name" value="DevC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="269"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="322"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="357"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="FtsX" evidence="8">
        <location>
            <begin position="299"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="380"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="380" mass="40778" checksum="6A983D90B0D59F87" modified="2018-04-25" version="1" fragment="single">MSRLLQWIFGRLPIGWLQLTHKRGRFIAALSGVAFANVLVFVQLGIMNSMATATLRPYTFFQADIMISAKDANALDEGGNVARQWMLQAFGDPDVVAGMGLLVGKAPWDRGGADISFTTFGIDPGQPDFIAPEIAADIAMLQVKDVAILDRLARGLARDEAAAIRPQTPLSLETQSRTLTAMTTFAGGGGFGGDGYMFVSDQTFLSLFPDRRSAAPDHVLLRVRSGANVELVAERLRGLISDDTLRVRSYAEAAGEELRYQQTQRPTGVIFGFGVLIGVLVGLIIVYQVLSADVADHLREYATFKAMGYGPRFFIGIVVEEALVLGILGFLPGLAVGTAMLTLMGKVTTLPLAMTPGMAITVFLGTVVFSVVSGIVATRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF2</accession>
    <name>A0A2M9PDF2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_07655</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000391">
        <property type="protein sequence ID" value="PJN95577.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0075713">
        <property type="term" value="P:establishment of integrated proviral latency"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046718">
        <property type="term" value="P:viral entry into host cell"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044826">
        <property type="term" value="P:viral genome integration into host DNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044068">
        <property type="entry name" value="CB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038488">
        <property type="entry name" value="Integrase_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025166">
        <property type="entry name" value="Integrase_DNA_bind_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13356">
        <property type="entry name" value="Arm-DNA-bind_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51900">
        <property type="entry name" value="CB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-1179">Viral genome integration</keyword>
    <keyword evidence="5" id="KW-1160">Virus entry into host cell</keyword>
    <feature type="domain" description="Core-binding (CB)" evidence="8">
        <location>
            <begin position="82"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="domain" description="Tyr recombinase" evidence="7">
        <location>
            <begin position="188"/>
            <end position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95577.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="382" mass="41935" checksum="305ABA7103D368CB" modified="2018-04-25" version="1">MKTLATPGKYFDGHGLYLRVDSNGSRFWVQRIVIRGKRCELGLGSPSLVTLAEARSVALDNRKLARAGGDPMADKRKAKSILTFQEAARKAHAELSPTWKNPKDRAAFLATLTTHAFPRIGSCSIPEVTSSDIRQVILGARKVAPEVARKLVFRISAVFKWAIAEGMRKDNPARADALALPRTTTKRERRKALPYSEVATCLDAVRASGASQATKLALEFLVLTAARSGEVRMAVWSEFDLEAAVWEIPEERMKMKRPHRVPLSPAALAILGQAKALEDGSGLVFPGTKLGRPLSDMTLSKLVKELGFAADVHGFRTSFRTWAQERTNFPREVAEAALAHAVGDAVEQAYARSDVFEKRRKMMNAWAAYLAGTRAKVVRIGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM4</accession>
    <name>A0A2M9PDM4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000359">
        <property type="protein sequence ID" value="PJN95651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13086" checksum="1E356ACFB93186E4" modified="2018-04-25" version="1" fragment="single">TLGGWNVAVSQHSEHKDAAIALALYLAGPEVQKRRAIASSSLPTLPALYDDAEIAAAQPIIPLWKDVLANAVPRPSAPAKVKYNELSSKFWSAAHETLSGNGSAAENLEVLELDLTDLKGDAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ9</accession>
    <name>A0A2M9PDQ9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">tRNA modification GTPase MnmE</fullName>
            <ecNumber evidence="6">3.6.-.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">mnmE</name>
        <name evidence="6" type="synonym">trmE</name>
        <name evidence="11" type="ORF">CNY89_07125</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
        <text evidence="6">Binds 1 potassium ion per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.-.-" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000354">
        <property type="protein sequence ID" value="PJN95666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04164">
        <property type="entry name" value="trmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.430">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00379">
        <property type="entry name" value="GTPase_MnmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031168">
        <property type="entry name" value="G_TrmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006073">
        <property type="entry name" value="GTP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018948">
        <property type="entry name" value="GTP-bd_TrmE_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004520">
        <property type="entry name" value="GTPase_MnmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027368">
        <property type="entry name" value="MnmE_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025867">
        <property type="entry name" value="MnmE_helical"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005225">
        <property type="entry name" value="Small_GTP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01926">
        <property type="entry name" value="MMR_HSR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12631">
        <property type="entry name" value="MnmE_helical"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10396">
        <property type="entry name" value="TrmE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00450">
        <property type="entry name" value="mnmE_trmE_thdF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00231">
        <property type="entry name" value="small_GTP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 7" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 6 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0630">Potassium</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="TrmE_N" evidence="9">
        <location>
            <begin position="4"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="MnmE_helical" evidence="10">
        <location>
            <begin position="122"/>
            <end position="425"/>
        </location>
    </feature>
    <feature type="domain" description="G" evidence="8">
        <location>
            <begin position="217"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="21"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="79"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="119"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="225"/>
            <end position="230"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="225"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="244"/>
            <end position="250"/>
        </location>
        <ligand>
            <name>GTP</name>
            <dbReference type="ChEBI" id="CHEBI:37565"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="244"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="249"/>
        </location>
        <ligand>
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="250"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="428"/>
        </location>
        <ligand>
            <name>(6S)-5-formyl-5,6,7,8-tetrahydrofolate</name>
            <dbReference type="ChEBI" id="CHEBI:57457"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003313"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF10396"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF12631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="428" mass="45878" checksum="BC2A0CEECEE64469" modified="2018-04-25" version="1">MEQTIFAQATPPGRSGVAVIRISGPNAHDAARALGAGDPPLRHAALRRLTDPRTHATLDTALVLRFAAPNSFTGEDCVELHVHGGPAVCRSVQAALLALPGLRLAEPGEFTRRALLNGKIDLAQAEGLADLLAAESESQARQAMALMDGRLSAKATDWRRLLIESLALLEACIDFSDEEIPSDLIWRVEADLRGLAVSLDAELEGSEASERLRLGYEVALVGAPNVGKSTLLNALAKRDVAITSEIAGTTRDVIEVRMELRGLPVTIIDLAGLREARDPIEEIGVGRARERAGYADLRIFLLEQEEDIVELGVDRKDRDLVVFAKADVRKDGRGVSGRTGQGLEGLIDSIVTELGQRAASASLIGHERQRDAVQHACSATVRALQMLASPELAAEDVRQALRSLDFLLGAADVEAVLDVIFGRFCIGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR5</accession>
    <name>A0A2M9PDR5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">CagE_TrbE_VirB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06970</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TrbE/VirB4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000343">
        <property type="protein sequence ID" value="PJN95695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018145">
        <property type="entry name" value="CagE_TrbE_VirB_cntrl_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03135">
        <property type="entry name" value="CagE_TrbE_VirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CagE_TrbE_VirB" evidence="2">
        <location>
            <begin position="72"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006512"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03135"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="664" mass="72631" checksum="94D16EB66D8C01A3" modified="2018-04-25" version="1">MELRERRSFLTVVLRPQKLLRLSTRLFGAGATAQRDHLARRIERLNETVSYLMETLAVAGPERLTVADGRWLGLLRTLVTGRFEPIPLPQTFEPVANLVAGSSVRFEGDRFLVPGASTEDMRFGAVFSLKAYPASTAPGIFDHFDLDFDSVVTHSFTPIEQFEALARIRRTVRQMGAADDAAASLRGQLIDAADDLASGRISFGLHHASIAVFARDEEDLDEAAAQVRASGQRAACVLVREDIGARSTWFAQHPGNQSYRARAAMVSSRNFAHFTALHAAPGGLDADRTPWGEAVTILPTVSSSAYRFNFHLGGKAGERTVGHTLVLGQTGSGKTLGTAFLIAQGRRTGCRVIVFDKDRGLEMPVRAMGGAYSAVRLGEATGFNPFAAETDDRGRAWLADWLAAMLSREGPLTAIQSQALTQAVAANAETDPGLRTLASFRRQFRSVDDDGALHDRMGDWDQDGSFGWLFSGAGVDTLSFDQPVTGFDLTEIFDTSAVRTAWLSYVFRRIERTVEDSRPTLIVLDEAWKLLDDPYFERRLKDWMLTMRKKNVAVVLLTQRVAHIRESKAGGSILESAVTTVLYPNSRNTAEELAPLALSDRELDFACVSALEARLALVRSGGASAIVDMDLRALGPLVKVLGGGAGEWAAEGWRERPDFWKEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS0</accession>
    <name>A0A2M9PDS0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">FAD-oxidase_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000356">
        <property type="protein sequence ID" value="PJN95662.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.45.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004113">
        <property type="entry name" value="FAD-linked_oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016171">
        <property type="entry name" value="Vanillyl_alc_oxidase_C-sub2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02913">
        <property type="entry name" value="FAD-oxidase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-oxidase_C" evidence="1">
        <location>
            <begin position="9"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95662.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="179" mass="19033" checksum="126781EDA6F0DB5F" modified="2018-04-25" version="1">MKRDASSKDEATDRAVDAGLATDALIAQNEAQRRAFWTVRETIPEANRLIGSVSSHDVSVPMARIPAFLVEADAAMAALDPTLRINCFGHLGDGNLHYNVFPAAGRSRDAYDALREPVKRGLHDLVAAYGGSVAAEHGVGRLKTADLARYGDPTRVALMRAVKAAFDPLGVLNPGAVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU8</accession>
    <name>A0A2M9PDU8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Ubiquinone-dependent pyruvate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_06800</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TPP enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000329">
        <property type="protein sequence ID" value="PJN95727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012000">
        <property type="entry name" value="Thiamin_PyroP_enz_cen_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00205">
        <property type="entry name" value="TPP_enzyme_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="TPP_enzyme_M" evidence="2">
        <location>
            <begin position="14"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="3">
        <location>
            <begin position="203"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007812"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="397" mass="42224" checksum="89FCF878B91DE704" modified="2018-04-25" version="1" fragment="single">PPEPLVFPREPELAALADLLNGSKRVTLFCGRGCAGAHGPLLALAEALKAPIVHALGGKEHVEYDNPYDVGMTGLIGFSSGYEAMQACDTLLMLGTDFPYKQFYPTEAKIAQVDVRPGNLGRRCRLELGLVGDVGATIAALLPRLEVKADRRHLDESLARYVKSREGLDELAQGTPGRLPIHPQYLARLISEQAAEDAVFTFDVGTPTIWAARYLKMNGRRRMVGSLVHGSMANALPQAIGVQAADRGRQVISLSGDGGFTMLMGDLITLTQAKLPVKVVILNNGNLGFVALEMKAAGLPEFGADLQNPDFGAMARAMGIHGVRVEDPGDLPGAVAEILAHDGPAVLDVATAPQELSMPPTISLDQVKGFSLWAVRAVMSGRGDAVLDLAKQNLLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ0</accession>
    <name>A0A2M9PDZ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000327">
        <property type="protein sequence ID" value="PJN95733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7825" checksum="98919880B8E54D0C" modified="2018-04-25" version="1">MAYASHLDIARYDDDQGLFGRVLDAIAGYRKYVETLNELNQLTDRELLDLNLSRHAIRDVAREAVFGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE16</accession>
    <name>A0A2M9PE16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000305">
        <property type="protein sequence ID" value="PJN95789.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95789.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6595" checksum="7B4418DB4B70319B" modified="2018-04-25" version="1">MTEILPFDAAAPDAAPVVQSVTEQMRAQAAEDVLTLMAQAVQASEGLQVNQALLERVLAQFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE18</accession>
    <name>A0A2M9PE18_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SBP_bac_5 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06655</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000321">
        <property type="protein sequence ID" value="PJN95748.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="7"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95748.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="27063" checksum="E6480C495787B131" modified="2018-04-25" version="1">MVRLGHARRPARDASILAMNNAKPPFDDIRVREAIGHAIDRKAIIDGAMFGYGTPIGSHFPPHHPAYVDMTAATSFDPALARTMLAEAGLPDGFKARLVLPPPPYARRGGEIVAAQLRAVGIETEIQNVEWAQWLEQVFKNKDYDLTIVSHTEPMDIGIYARDDYYFGPADPVVKALMDGMETMTDPEDRAEVLAAVQRRVADRATNVFLFQLPKTGVADARIQGLWENMPTQANDMTGVYWTE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE41</accession>
    <name>A0A2M9PE41_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">L-serine ammonia-lyase</fullName>
            <ecNumber evidence="4">4.3.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_06525</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-serine = NH4(+) + pyruvate</text>
            <dbReference type="Rhea" id="RHEA:19169"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="EC" id="4.3.1.17"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the iron-sulfur dependent L-serine dehydratase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.17" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000310">
        <property type="protein sequence ID" value="PJN95774.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003941">
        <property type="term" value="F:L-serine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006094">
        <property type="term" value="P:gluconeogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029009">
        <property type="entry name" value="ASB_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005131">
        <property type="entry name" value="Ser_deHydtase_bsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03315">
        <property type="entry name" value="SDH_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143548">
        <property type="entry name" value="SSF143548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="8" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SDH_beta" evidence="9">
        <location>
            <begin position="4"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95774.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4611" checksum="E5C404387561E52B" modified="2018-04-25" version="1" fragment="single">MFLSVFDIFKIGVGPSSSHTMGPMLAAARFLDALRSGADRVPGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE43</accession>
    <name>A0A2M9PE43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06235</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000293">
        <property type="protein sequence ID" value="PJN95820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015501">
        <property type="term" value="F:glutamate:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015813">
        <property type="term" value="P:L-glutamate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004445">
        <property type="entry name" value="GltS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03616">
        <property type="entry name" value="Glt_symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8672" checksum="73D07F14B69C7272" modified="2018-04-25" version="1">MTQIQFPDFMSVTFGLVAYLLGEGINRRVALLRKFNIPDPVTGGLLLALAFFALYRLGLAEVSGRPAAADEAAASRTRFP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE48</accession>
    <name>A0A2M9PE48_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000294">
        <property type="protein sequence ID" value="PJN95819.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95819.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16262" checksum="1A78B24C81BFB6D5" modified="2018-04-25" version="1" fragment="single">RLDALFNNGAYAIPGAAEDLPRDALRAIFETNFFGQVDLANRLLPAMRAAGSGRIVMNSSVLGLMAAPWRAAYTATKFALEGFTDTLRVELRGSGVHVALIEPGPIDTPFRRKAIPHFERWIDWRASPHSRRGTARPRPRGAAAPASRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ5</accession>
    <name>A0A2M9PEJ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">MnhB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_05285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000239">
        <property type="protein sequence ID" value="PJN95977.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007182">
        <property type="entry name" value="MnhB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04039">
        <property type="entry name" value="MnhB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="152"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="181"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="222"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="262"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="MnhB" evidence="8">
        <location>
            <begin position="157"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF04039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95977.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="300" mass="33068" checksum="D71581E2DA63405F" modified="2018-04-25" version="1">MVEIVTTVLLLLGLRWLPKRREHIAADVEVPAKLRRARDLVIAVACGTGLAAISYAVMTRPIDREIATFFLENAYKEGGGTNVVNVILVDFRGFDTFGEIAVLAIVALTVFALLRRFRPADESVDLPEQQRLQDAFDDEAEDRSRGDTVRDYMLVPSVIMRWMFPAIIVVSAYLFLRGHDLPGGGFAAGVTLAIGFLLQYLGSNVRKVEAQLRILPVRWMGLGLLTAAATGAGAWLFGYPFLTSYSRYVELPWIGKVPFATALLFDLGVYLLVVGAIVLVLVAIAHQSLRSMRARNKEDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK7</accession>
    <name>A0A2M9PEK7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Orotidine-5'-phosphate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05225</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000235">
        <property type="protein sequence ID" value="PJN95987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004590">
        <property type="term" value="F:orotidine-5'-phosphate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006207">
        <property type="term" value="P:'de novo' pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001754">
        <property type="entry name" value="OMPdeCOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00215">
        <property type="entry name" value="OMPdecase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMPdecase" evidence="2">
        <location>
            <begin position="6"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00215"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10625" checksum="50E22385489FBE89" modified="2018-04-25" version="1" fragment="single">MTNSDPRLILGLDLPDAVAARAMVDRLEGEVGFFKIGLGLLASGGLDLAAGLKAEGARVFLDLKLFDISATVTAAVRGLMRIAPDFLTVHGDPHVVRAAVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN6</accession>
    <name>A0A2M9PEN6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000245">
        <property type="protein sequence ID" value="PJN95954.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95954.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="15084" checksum="9FACE861488F6FF1" modified="2018-04-25" version="1" fragment="single">GGPLNGPLVTESSFSGITWVEVKRLETLGAIGDTSEPVTFDDIGEARRIKLKGVRDAGTMEVVAGIDYSDAGQEDVLEAEASPNSFAFKIQFNDAPAGGTPSLRLFVAHVLSASEQLDTASSVMKLNMSLGVNSNVVRVAAEEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP3</accession>
    <name>A0A2M9PEP3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000225">
        <property type="protein sequence ID" value="PJN96015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="34"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8416" checksum="50B88E775FC1F647" modified="2018-04-25" version="1">MTDAPHPIRKPDQDGKAARQAAALRANLGRRKAQKRARGAEDKAARDMAVPDTVEQDAAPQDAAPQDMALQDAAEQDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX0</accession>
    <name>A0A2M9PEX0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cobalt ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04950</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000218">
        <property type="protein sequence ID" value="PJN96034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03225">
        <property type="entry name" value="ABC_cobalt_CbiO_domain1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015856">
        <property type="entry name" value="ABC_transpr_CbiO/EcfA_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="14"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="45"/>
            <end position="52"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="27153" checksum="F2DAB65AF987E975" modified="2018-04-25" version="1">MDGMRMAGAVALTIELDDLCYEAGGRAILSGVTLACSARRIGVVGRNGSGKSTLARLLAGLLAPTSGRVRLGDVDVFRDRRAALDRVGILFQNPEHQIIFPRVAEEIAFGLRQQGLGKAEAAERCEAVLRSFDKAHWKDAPVSALSQGQKHLLCMMAVLAMRPRLLILDEPYAGLDIPTRRQLGRYLRRADTQTLHISHDPGDLEDCDALFWLDRGRIVAEGPPSGLLPDFTAEMIRLGDLDDIADFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY3</accession>
    <name>A0A2M9PEY3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Protein HflK</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">hflK</name>
        <name evidence="8" type="ORF">CNY89_04555</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">HflC and HflK could encode or regulate a protease.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">HflC and HflK may interact to form a multimeric complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the band 7/mec-2 family. HflK subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000197">
        <property type="protein sequence ID" value="PJN96099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03404">
        <property type="entry name" value="SPFH_HflK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.479.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001107">
        <property type="entry name" value="Band_7"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036013">
        <property type="entry name" value="Band_7/SPFH_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010201">
        <property type="entry name" value="HflK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018968">
        <property type="entry name" value="Phasin"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43327:SF2">
        <property type="entry name" value="PTHR43327:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01145">
        <property type="entry name" value="Band_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09361">
        <property type="entry name" value="Phasin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00244">
        <property type="entry name" value="PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117892">
        <property type="entry name" value="SSF117892"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01933">
        <property type="entry name" value="hflK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="PHB" evidence="7">
        <location>
            <begin position="156"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="319"/>
            <end position="346"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU364113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="442" mass="48024" checksum="D2A3F007E7CF11FF" modified="2018-04-25" version="1">MTARTKAVAAVEDATEATTNAFQDTTAKVETFVADAQKTFTVNVEKFTKGIEGLTAFSQENVEALKKSSEIAAKASEGIASEVSAYSKKAFEDGVAAAQDFAAAKTLTELFEKQTAFAQSSFEGFVQQSTKMNEILAAATKDIAIAAALFGFWLLMSFYTVRPEEQAVELTFGECRGDCIGEPGLNFAPWPVVTREIVQVTGERTEEIGSGTLRGTSAGLMLTGDENIVDITFQTVWNVRDPAQFLFNLSDPRATIEAVSESAMREVVSRSDLSPILSRDRGVISQEVQSLIQATLDEYGSGVNVVRVNFDQADPPEQVIDAFREVQAARQERSTLQNRADAYANERLAAARGQSAQLLQESESYRAQQVNSAQGEASRFNAVLAEYVKAPDVTRKRLYLETMEGVLGDVQMFLVDTPNANGQGVVPFLPLNELRRPAGGDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF37</accession>
    <name>A0A2M9PF37_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase U37</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04165</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000177">
        <property type="protein sequence ID" value="PJN96170.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="181"/>
            <end position="264"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96170.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="684" mass="74542" checksum="86D37DB2FD2D0334" modified="2018-04-25" version="1">MDTMIELPAMRRSAELAPNTADADSRTVEVVWSAGARVRRATFFGEPYDEELSLDPAHVRLDRLNAGAPFLKVHELDTLDAVIGSVVPGSARIENGRGIALVRISERADVEPIWRDIQAGHIRAVSIGYQVHRFEVSKPDAARELWRAVDWTPFEVSAVAVGADPAAGFRAQHPLHDCVLHRRDAPSSPKGPIPMTDKTETPASDAAPATPQPTEPVETEDTTMTDQKPAAPEPKGAAVETRSQPKTQATPAPDTEAIATRAREAERDRVSTIYDLAGRLNLERGFAEDLVKRGVSVDESRRLILDQVTTKSDETRTFGHVSVPLGGRDERITRRDAVANALLHRYSPTLFQLEDAARQYRGMTLLELARESLGNAGVNTRGLSRDEVATRALHSTSDFPEILSAVTNKTLRQAYEAYPRTFMLFCRQVLATDFKAMHRVQLGEAPQLLEVGESGEFKRGTLGESKESYKVKTYGRVVAITRQTLINDDLDAFTRIPAMYGNSIAQLESDVVWGIITANPAMADGNALFHTTHKNLAGTGAALDVGSVGAARAAMAKQTGLDKKTVLNVRPAFLIVPASLELKAEQLVAQNLVPAATSSVVPQSIRTLAPISEPRLDAASETAWYLAASPNQIDTIEYAYLEGQQGAYIETRNGFDVDGVEIKCRLDFGAKAIDWRGLYKNPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF67</accession>
    <name>A0A2M9PF67_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">ATP synthase subunit b</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">ATP synthase F(0) sector subunit b</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">ATPase subunit I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">F-type ATPase subunit b</fullName>
            <shortName evidence="13">F-ATPase subunit b</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">atpF</name>
        <name evidence="15" type="ORF">CNY89_04095</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria.</text>
    </comment>
    <comment type="function">
        <text evidence="11 13">F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">F-type ATPases have 2 components, F(1) - the catalytic core - and F(0) - the membrane proton channel. F(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). F(0) has three main subunits: a(1), b(2) and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F(1) is attached to F(0) by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cell membrane</location>
            <topology evidence="13">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 13 14">Belongs to the ATPase B chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000174">
        <property type="protein sequence ID" value="PJN96179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01398">
        <property type="entry name" value="ATP_synth_b_bprime"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002146">
        <property type="entry name" value="ATP_synth_b/b'su_bac/chlpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00430">
        <property type="entry name" value="ATP-synt_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 13" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="13" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 13 14" id="KW-0138">CF(0)</keyword>
    <keyword evidence="6 13 14" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="15" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 13 14" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 13" id="KW-0472">Membrane</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 13 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 13" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 13 14" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="13">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005513"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00025198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01398"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="RuleBase" id="RU003848"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="200" mass="20594" checksum="03C4A12F159B370E" modified="2018-04-25" version="1">MAEETEAGHGVVVQNGEAVAVGAGHETTGAAVLEHAEVAMPQLDIALYPNLIFWLVVSLVAIYMILTRIALPRVGAILAERNDAISNDLEQAALYKRRATEAEAAYNAALAKAREESQKIAAEAKAAVGKELAVVMAKADAEIAAKAAESEARIREIEASAAQSVAEVAKSTAEAIVAALGPRAIDSAAIDAAVTARLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN1</accession>
    <name>A0A2M9PFN1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000121">
        <property type="protein sequence ID" value="PJN96351.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="83"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96351.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="161" mass="17337" checksum="14C84B5129FF0CB4" modified="2018-04-25" version="1" fragment="single">MGADRTLGVVKSVLVAVLVLNFATVVLRPQVGIHQFEAGGDPGLIGDWRGFFPEKNLTGAVTAVTFLILWFDPRSKTNLAHLGLILGSLVFLVQTGSKTSLGIGLVSLVLGLAYRRYDWRFWPVAMVALALLALAAAWAVVASWDIISATLDRQDAFTGRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG06</accession>
    <name>A0A2M9PG06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000084">
        <property type="protein sequence ID" value="PJN96487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6605" checksum="E55433666F766C10" modified="2018-04-25" version="1" fragment="single">TVPTFVESGLAPRHVDLRPYCLVGREVHLCPGGLTRVAMREGSLVVNSSQGGGVKDTWVLAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG09</accession>
    <name>A0A2M9PG09_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Dihydroxy-acid dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02255</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IlvD/Edd family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.9" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000084">
        <property type="protein sequence ID" value="PJN96485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004160">
        <property type="term" value="F:dihydroxy-acid dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.30.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042096">
        <property type="entry name" value="Dihydro-acid_dehy_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000581">
        <property type="entry name" value="DiOHA_6PGluconate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037237">
        <property type="entry name" value="IlvD/EDD_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00920">
        <property type="entry name" value="ILVD_EDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143975">
        <property type="entry name" value="SSF143975"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="585" mass="62772" checksum="AFB1DE3AA1E16199" modified="2018-04-25" version="1">MTSTPKVFTPKAWPRKLRSQEWFGGSSRDAIYHRGWMKNQGFPHDLFDGRPVIGILNTWSELTPCNGTLRDLAERVKHGVYEAGGFPVEVPVFSASESAFRPTAMMFRNLAAMAVEEAIRGQPMDGCVLLVGCDKTTPSLLMAAASCDLPAIVVTGGPMLNGYFRNERVGSGTHLWKFSEAVKAGEMTAAEFAEAEASMSRSPGSCNTMGTASTMASMAEALGMALSGNAAIPAVDSRRRVMAQLTGRRIVQMVKDDLKPSDVMTKQAFENAIRTNGAIGGSTNAVIHLLGIAGRVGVDLTLDDWDRCGRDVPTIVNLMPSGEYLMEEFFYAGGLPVVIKRLGESGLLHKDALTVSGETMWDQVKDVVNHNEDVIRPVERALAASGGVAVLKGNLAPKGAVLKPSAASPHLMVHRGRAVVFEDIDDYKARIADEALDIDETCVMVMKHCGPKGYPGMAEVGNMGLPPKVLRKGITDMVRISDARMSGTAYGTVVLHTSPEAAVGGPLAVVRDGDMIEIDVPNRRIHLDVSEDELAARLEAWTPRTDPPPSGYAKLFHDTVQGADTGADLDFLKGCRGAPVGRDSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG43</accession>
    <name>A0A2M9PG43_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TonB_dep_Rec domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the TonB-dependent receptor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000082">
        <property type="protein sequence ID" value="PJN96492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039423">
        <property type="entry name" value="TonB-dep_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000531">
        <property type="entry name" value="TonB-dep_rcpt_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036942">
        <property type="entry name" value="TonB_rcpt_b-brl_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32552">
        <property type="entry name" value="PTHR32552"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00593">
        <property type="entry name" value="TonB_dep_Rec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TonB_dep_Rec" evidence="2">
        <location>
            <begin position="36"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="324" mass="35179" checksum="2A0194426C29457A" modified="2018-04-25" version="1">MSPCGRLAPSRFVLRAARAGRPDAGDHLARRQDRHAGRVQTVEQIGLYFHDQAQVTDRLLASFGLRQSWVRNRYDDHLGSDDSRQDDAKLVGDIGFVYELPNGVLPYASYSTGFVTNVGADFDGNLQEPTEAEQYEIGARYRPQSFDALFSVALYQITKTNVLTVDPEHSGFWVQTGEVRHRGVEVEADVTLAEGLSAVASWSFIDAEITSSNDGDEGNVPAQVPEHSGSIWANYALPGGRLEGLSFGAGVRYVGSSYGDATNTRKSDAYTTVDAALRYGRGAVQGSVNVTNLFDEAYHPICYAGGGCTQGEARTVQAMLSFAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC0</accession>
    <name>A0A2M9PGC0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Spermidine/putrescine import ATP-binding protein PotA</fullName>
            <ecNumber evidence="8">7.6.2.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">potA</name>
        <name evidence="10" type="ORF">CNY89_01620</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">The complex is composed of two ATP-binding proteins (PotA), two transmembrane proteins (PotB and PotC) and a solute-binding protein (PotD).</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.6.2.11" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000058">
        <property type="protein sequence ID" value="PJN96598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015417">
        <property type="term" value="F:ABC-type polyamine transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005893">
        <property type="entry name" value="Sp_pt_ABC_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01187">
        <property type="entry name" value="potA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 7 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-1278">Translocase</keyword>
    <keyword evidence="1 8" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="9">
        <location>
            <begin position="2"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="32"/>
            <end position="39"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU364083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="354" mass="39118" checksum="C2BD7F2B603BF92C" modified="2018-04-25" version="1" fragment="single">FEHVQKSYDGETLVVKDLNLDIGRGEFLTMLGPSGSGKTTCLMMLAGFETATHGDIRLGGRPINHIPPEKRGIGMVFQNYALFPHMTVGENLAFPLQVRKMGKAEIEAKVARALDMVQMGAFAARRPAQLSGGQQQRVALARALVFEPELVLMDEPLGALDKQLREHMQFEIKHIHERLGVTVVYVTHDQGEALTMSDRVAVFNDGRIQQLAPPEELYERPLNRFVASFIGENNTLGGVVETIDGGVCTVRLPTGELLDATAVNVSRPGEATTVSIRPERVEYKSANIPAGVHTLEAEVLEFIYMGDIFRTRMRVAGNDDFVMKCRNSPGQRRLAPGERLRIGWLPDDCRALDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC3</accession>
    <name>A0A2M9PGC3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000059">
        <property type="protein sequence ID" value="PJN96590.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="403"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96590.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="403" mass="42332" checksum="5591BFFD30EFDE9A" modified="2018-04-25" version="1" fragment="single">MIVEALKRDGIDPATLGTLNASGKPMTIADLGPNTRQLVGAASRQGGEGRKLMEQFFENRTLGQFGRISDDLARGTGVRGEDFAATTGSVLQRRGADAAAGYPAAYAKQAPVLSENAFGILATPDGRRAVSTATRMMANKRAPVVDESGAYTVEMLDQIQRAMRDSANRASGARAGEMAGNLNAMREQFLTELPADLRSVMADYRSQSELLDALKAGREFFKGDAEALASAVQQMSPAERGMFRLGAVRELRGRVGAKLDSGDASGMFQNPAMRERLAAVFPDDVTLQRFVDSTATERAMQETRNAILKGSPTAQRLVDDAEFNGGALGEFAMDMATGGGGGVGVVKAVTNAALKGKDRFLQGVNEQVAGSVARTATNPDLGQVATQLGGPGVPALPYPVAPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH0</accession>
    <name>A0A2M9PGH0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Amino acid permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_01325</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000045">
        <property type="protein sequence ID" value="PJN96647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002293">
        <property type="entry name" value="AA/rel_permease1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13520">
        <property type="entry name" value="AA_permease_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="43"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="126"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="150"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="187"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="226"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="275"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="319"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="345"/>
            <end position="365"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="377"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="402"/>
            <end position="424"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="436" mass="45497" checksum="074A14669C4BEC79" modified="2018-04-25" version="1">MTKSDYEKNSITLPGAVAMGTGVMIGAGIFALTGQIAELAGPLFPLSFVVGAIVTAFSAYTYIKMSNAYPSAGGIGMILKKAYGPTTVAAGAALLMALSMVINESLVARTFGTYTLRAFGGDPDSVLVPILGVGLIVFAWLVNVSGNRSVGLFSIVMAVLKVGGIALFGAAGLWASGISFEATGGDMGATGFVASVALSILAFKGFTTITNSGAEVTDPHRNVGRAIIWSIAICVVVYLLVAFAVGSSLPLDRIVAAKDYALAEAAQPSLGQTGFYLTVALALVATASGLIASVFAVSRMLAMLTDMKMIPHSHFGMPGAIKDHTLVYTVVIAGFLTIFFDLSRIASLGAFFYLVMDMIIHFGVFRHLREEIGARGWVLLTAIAFDSVVLAAFAGMKWQSDPLIVVLGAIGMALVFLFVGIFLARNPAPEDAHDHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL2</accession>
    <name>A0A2M9PGL2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96678.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH" evidence="1">
        <location>
            <begin position="67"/>
            <end position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96678.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13057" checksum="B6A244C785586E57" modified="2018-04-25" version="1">MPMRAPRLCRCGHRVAHGVACPCERKADAARKARFDKGRPSAAARGYDGDWRKLRAAHLKAHPFCRCGAKAVEVDHHIPIRIAPARRLDPNNLKSLCLHCHRALKQSADSRTYERT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR9</accession>
    <name>A0A2M9PGR9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00820</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000026">
        <property type="protein sequence ID" value="PJN96733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043968">
        <property type="entry name" value="SGNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19040">
        <property type="entry name" value="SGNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="122"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="22"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="SGNH" evidence="3">
        <location>
            <begin position="304"/>
            <end position="508"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF19040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="529" mass="57283" checksum="FB3D81F0F65BD3B3" modified="2018-04-25" version="1" fragment="single">VFVSNVLLYADTGYFTTAAATLPLLHTWSLAIEEQFYIFWPIVLLLAIRFGRRATLMAVLGLCTLSLAASQWMVVRDPSAAFYLIPFRTWELGLGGILAILHLNQPATVRRDGAGFALVRNLLAAAGLGAILACVCTYRQPIVFPGLSALPPTLGTVAVIAAGSGAFVNRMLALPPVRFLGRISYSLYLWHWPVIVFSQRGLFLPETPSVIAGQIVVSIGLAWISYELVETRLRAVLARQDASAVLRRAGVAMAASALVSLTILRFDGFARRYNDDQLALASILDRDQEKACRRGTCFVVEAGDRFDKDACLASDGARPSLLLAGDSVAAHLSPGLAAVATDYDLDQATMVGCRPYLGNDPRLSCSRFFDTLLDEWVPQKRPDLLLLAGNWIASDAEPLRGTLEKLAASHQATVVVGPMPQYDSSPPRLLSFGTGPDRAARARAALNENLWRIDAEIGEVARSTGAFYISLLDMLCPSGECPTYARPNVPLQFDYVHLTTEGSEVVVGKMMERITALRRGEVSSAVASP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS8</accession>
    <name>A0A2M9PGS8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Monofunctional biosynthetic peptidoglycan transglycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_00785</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000024">
        <property type="protein sequence ID" value="PJN96740.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009274">
        <property type="term" value="C:peptidoglycan-based cell wall"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016763">
        <property type="term" value="F:pentosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011812">
        <property type="entry name" value="Pep_trsgly"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30400">
        <property type="entry name" value="PTHR30400"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0133">Cell shape</keyword>
    <keyword evidence="10" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="9" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="Transgly" evidence="12">
        <location>
            <begin position="55"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="232"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="240"/>
            <end position="312"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96740.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="34453" checksum="91123E35256C5490" modified="2018-04-25" version="1">MLAPGTRRLVLRLWLVLRRLALGLAVLAVGLVLAFRVVNPPITWLMATERLRVGELRKDWVPIEEMSVYLPLSAVAAEDANFCNHWGFDLDGIRAALADDERLRGGSTISQQVAKNVFLWPGRSWLRKGLEAGFTVLIEIFWPKRRILEVYLNVAEFDAGVFGVEAAREVGDPGGRLQLALGRDGAGDAGDVLDAPGQPVLVLDRGEDDLGDAERGDGEIVRAQAERDLAYQIGGPRGEEPAHRPGDQHRQAEAAEIAGRRGVDRLDRQRGGLEEDAHDRVADQHHDQARRPPHARGEPVAQEQRRAQRADD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P498</accession>
    <name>A0A2M9P498_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004758">
        <property type="protein sequence ID" value="PJN92364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7394" checksum="75010BC4D3B7A7E3" modified="2018-04-25" version="1" fragment="single">PRKRRHSGKDLKSKDFPMKPLLMLAVVGTSMLAGTAGFSQDASAEDLLETLKGVAPADLLQNATLVQVSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C0</accession>
    <name>A0A2M9P4C0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS256 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_30200</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004707">
        <property type="protein sequence ID" value="PJN92384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7889" checksum="EFC64DEC2485DD13" modified="2018-04-25" version="1" fragment="single">MRGLVEKTPDADLLREMIGFAAERLMELEVGGLAGAAWGEKSAERLVQRNGYRDRMWETRAGSVELRIPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C6</accession>
    <name>A0A2M9P4C6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004680">
        <property type="protein sequence ID" value="PJN92396.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92396.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3604" checksum="2A5F8F14B51675A3" modified="2018-04-25" version="1" fragment="single">MGGLFAPDLRRRTGLVLAVWFLVSISYYGVFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E1</accession>
    <name>A0A2M9P4E1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Quinolinate synthase</fullName>
            <ecNumber evidence="3">2.5.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_29870</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from iminoaspartate: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.72" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01004593">
        <property type="protein sequence ID" value="PJN92421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008987">
        <property type="term" value="F:quinolinate synthetase A activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10800">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003473">
        <property type="entry name" value="NadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036094">
        <property type="entry name" value="NadA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02445">
        <property type="entry name" value="NadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142754">
        <property type="entry name" value="SSF142754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN92421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6619" checksum="06409D292173D7EC" modified="2018-04-25" version="1" fragment="single">EFAKPCNMCPYMKKITLEKVLYSLHTGLGEVTVDPQVSARARLAVERMIEISRRPAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H2</accession>
    <name>A0A2M9P4H2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VapC toxin family PIN domain ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004498">
        <property type="protein sequence ID" value="PJN92444.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92444.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="4083" checksum="805364D925E20D91" modified="2018-04-25" version="1" fragment="single">MIFLLDVNVLIALTDPAHVAHDDAHVWFAETGRHAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K2</accession>
    <name>A0A2M9P4K2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">EamA family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004413">
        <property type="protein sequence ID" value="PJN92474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3588" checksum="2217BCFBD49D5F5B" modified="2018-04-25" version="1" fragment="single">MVQRRDNLRGAAFMTLSMAGFCLNDTLVKSLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L1</accession>
    <name>A0A2M9P4L1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004353">
        <property type="protein sequence ID" value="PJN92491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8614" checksum="48B55E972421DCA2" modified="2018-04-25" version="1" fragment="single">DALLSPWKDMSPDHDLKSYLTAKINALYGHPRIGRYKAVWNETSAAAQAIFQAMADLAKISASFSTSVTTVEKATCGSHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P5</accession>
    <name>A0A2M9P4P5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">HAD family hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21205</name>
        <name evidence="1" type="ORF">CNY89_29185</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004329">
        <property type="protein sequence ID" value="PJN92500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001991">
        <property type="protein sequence ID" value="PJN93382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4962" checksum="C7721E9C1BF5DA99" modified="2018-04-25" version="1" fragment="single">GPAQGLPDSPVGTFSQEMYDLGKKEGWVIVSMKNDWKKIFAFEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z3</accession>
    <name>A0A2M9P4Z3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Haemagg_act domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_28085</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003942">
        <property type="protein sequence ID" value="PJN92624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008638">
        <property type="entry name" value="Filamn_hemagglutn_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05860">
        <property type="entry name" value="Haemagg_act"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01901">
        <property type="entry name" value="adhes_NPXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Haemagg_act" evidence="2">
        <location>
            <begin position="1"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="49"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF05860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="10226" checksum="89B149358A3621FF" modified="2018-04-25" version="1" fragment="single">QKSKRAIVDWKRFDVGRGHEVIFDQPDARSATLNRVRSAERSLIEGAIRRAGHGRPPEVEARHRRLEALRRRPRPRGDLRPAGRPLGHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P530</accession>
    <name>A0A2M9P530_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA chaperone Hfq</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003866">
        <property type="protein sequence ID" value="PJN92647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01716">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00436">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005001">
        <property type="entry name" value="Hfq"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34772">
        <property type="entry name" value="PTHR34772"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17209">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02383">
        <property type="entry name" value="Hfq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0346">Stress response</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6590" checksum="7E3E3F341CECC259" modified="2018-04-25" version="1" fragment="single">MVNNVRKAKVPVTIFLMNGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTVMPSQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P573</accession>
    <name>A0A2M9P573_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003790">
        <property type="protein sequence ID" value="PJN92679.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92679.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6821" checksum="25D0B194957605E9" modified="2018-04-25" version="1" fragment="single">MRGGAVLGVALDLDVEPAGKDRRQPLRQARGLEMHVVGGDERQVEIVGECDQLRLGRGLDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C2</accession>
    <name>A0A2M9P5C2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26945</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003586">
        <property type="protein sequence ID" value="PJN92754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TPP_enzyme_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="TPP_enzyme_C" evidence="1">
        <location>
            <begin position="34"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10486" checksum="A35BB5A314191BF3" modified="2018-04-25" version="1" fragment="single">VVCFTGDGDFQMTATELGTALQAGAQPIVLLLNAARIAHPDRRVVCFTGDGDFQMTATELGTALQAGAIEDKNAILPLDSAIQGNLKETTTRVLASLTPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D4</accession>
    <name>A0A2M9P5D4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein ParA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003631">
        <property type="protein sequence ID" value="PJN92739.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="9"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92739.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7305" checksum="340C99CBB8D1D036" modified="2018-04-25" version="1" fragment="single">MSETRKPHVLAIANQKGGVGKTTTAINLGTALAASGHKVLLVDFDPQGNASTGLGINAHARRFTAYDLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F7</accession>
    <name>A0A2M9P5F7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003521">
        <property type="protein sequence ID" value="PJN92772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7858" checksum="E99FC964FA1B8788" modified="2018-04-25" version="1" fragment="single">MLRRSQVIAVEIRQRLDKCLPKRLDRFFVGEVRNVLGQLEFRLIVASRTARAARARSTRASSISARTCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K2</accession>
    <name>A0A2M9P5K2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydropyrimidine dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003338">
        <property type="protein sequence ID" value="PJN92831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1060.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028261">
        <property type="entry name" value="DPD_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006006">
        <property type="entry name" value="GltD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009051">
        <property type="entry name" value="Helical_ferredxn"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42783:SF1">
        <property type="entry name" value="PTHR42783:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14691">
        <property type="entry name" value="Fer4_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fer4_20" evidence="1">
        <location>
            <begin position="1"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12014" checksum="7EFFBDFFAE6A24CC" modified="2018-04-25" version="1" fragment="single">YCQSHCPLHNNIPDWLKLTAEGRLREAYEISQATNTFPEICGRICPQDRLCEGNCVIEQSGHGTVTIGAVEKYITDTAWDEGWVQPIRPYAERAESVGVIGAGPAARRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K8</accession>
    <name>A0A2M9P5K8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003438">
        <property type="protein sequence ID" value="PJN92798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010468">
        <property type="term" value="P:regulation of gene expression"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007820">
        <property type="entry name" value="AbrB_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05145">
        <property type="entry name" value="AbrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="10716" checksum="844F6E661EF0B7AF" modified="2018-04-25" version="1" fragment="single">MIGAAIGSSVTPAILGQAPSWWPTLLAMLPFVIAVQLANFALLRRLGGYDRPTAYFASSPGGLVDAVLLGEPVIGAAIGSSVTPAILGQAPSWWPTLLAMLPFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q2</accession>
    <name>A0A2M9P5Q2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_25005</name>
        <name evidence="7" type="ORF">CNY89_25685</name>
    </gene>
    <organism evidence="7 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003186">
        <property type="protein sequence ID" value="PJN92884.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002993">
        <property type="protein sequence ID" value="PJN92958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92884.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN92958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7747" checksum="07C174C16C3C32BD" modified="2018-04-25" version="1" fragment="single">TNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V9</accession>
    <name>A0A2M9P5V9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Carbohydrate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003041">
        <property type="protein sequence ID" value="PJN92941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4891" checksum="6EFACC4074F08F4E" modified="2018-04-25" version="1" fragment="single">MRATIVPDMAVWRARLDVLYPLANLVKISAEDLEQLHPGLSAES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z5</accession>
    <name>A0A2M9P5Z5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19470</name>
        <name evidence="2" type="ORF">CNY89_24740</name>
        <name evidence="1" type="ORF">CNY89_24810</name>
    </gene>
    <organism evidence="1 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002934">
        <property type="protein sequence ID" value="PJN92981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002920">
        <property type="protein sequence ID" value="PJN92991.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001626">
        <property type="protein sequence ID" value="PJN93628.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92991.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93628.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5454" checksum="17062B985534DFA5" modified="2018-04-25" version="1" fragment="single">MPSYAALDVSQETTAICVVDEAGRILAEKKVATCPDAITSYLTQKAPDLVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P683</accession>
    <name>A0A2M9P683_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD-dependent dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002797">
        <property type="protein sequence ID" value="PJN93037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9906" checksum="7BE926EDF8D90EA8" modified="2018-04-25" version="1" fragment="single">MKIAVLGGDGFVGWPTCLHLSEAGHEVHILDNLSRRWIDTELGVQSLTPMDSIQERTRIWRQETGRRIHFHLIDLARDYEILKAW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P690</accession>
    <name>A0A2M9P690_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24180</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002750">
        <property type="protein sequence ID" value="PJN93052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="4"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="106"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14490" checksum="6DA89C7D6DBD1B98" modified="2018-04-25" version="1" fragment="single">YHRNILIENNYIHSTNKLGITVAHGDGVVIRNNTVLHNDDMGFNSVPLINVSLLSRNVDIIGNTVYSVQKCGEFFLGGSRQHCRRPFQKSLGTASTRMAFWCAAPPTPSPKAPPPCRWSTRAPRSSRSTPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D9</accession>
    <name>A0A2M9P6D9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002674">
        <property type="protein sequence ID" value="PJN93080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6200" checksum="3B82641107F0A2C8" modified="2018-04-25" version="1">MPVAVLSLMQQYGSQAQGCNTAAQGPSVTMNEVSMKTASLVAALYIACSALAPQWAPADR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P3</accession>
    <name>A0A2M9P6P3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3'-kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002411">
        <property type="protein sequence ID" value="PJN93178.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93178.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12373" checksum="F2F2320A4256DF47" modified="2018-04-25" version="1" fragment="single">LFHKADEDNQADPSSIFIRGAAVARRLLAEDTPSYVLHGDLHHENIRHHPERGWLAIDPKGLYGDRAYDAANALCNPGTLPEIVLNPDRLLRQATIMADALDITFPRPRVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S2</accession>
    <name>A0A2M9P6S2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ku protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22715</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002354">
        <property type="protein sequence ID" value="PJN93205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009187">
        <property type="entry name" value="Prok_Ku"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016194">
        <property type="entry name" value="SPOC-like_C_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41251">
        <property type="entry name" value="PTHR41251"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100939">
        <property type="entry name" value="SSF100939"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16524" checksum="2C29B14B72AD2F7A" modified="2018-04-25" version="1" fragment="single">LAPASGTAGEAFVLIREGMRRKKVAAIAQAVLFRRVRTLLIRAHGDGLIATTLNFDYEVRSAREAFRSVSDRKIEGEMLDLAEHIIKTKMGRFDPATFEDRYEAALAELVKAKLEGRRIRPRKEPRREKVVDLLAALRESAGAGGGKPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T2</accession>
    <name>A0A2M9P6T2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002342">
        <property type="protein sequence ID" value="PJN93215.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93215.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5283" checksum="E199420D7DE50E93" modified="2018-04-25" version="1" fragment="single">MKRSRFTEEQIIGVLREHEAGAVVAELCRKHGLSSATFYAWKAKYGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6U7</accession>
    <name>A0A2M9P6U7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002300">
        <property type="protein sequence ID" value="PJN93238.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024501">
        <property type="entry name" value="DUF3141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11339">
        <property type="entry name" value="DUF3141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93238.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11153" checksum="56FE2EEE3C4A46DE" modified="2018-04-25" version="1" fragment="single">GGPPGPDGARPPRPGRSGQPLPRPAGARLRPDRGPGNPFLAWVAPLAQTVRDHRAPADPDNPFLALQARVSDRIVEGLEAYRKAVEATSEETFRRIYGAPARLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6X8</accession>
    <name>A0A2M9P6X8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19100</name>
        <name evidence="3" type="ORF">CNY89_22315</name>
        <name evidence="2" type="ORF">CNY89_24360</name>
        <name evidence="1" type="ORF">CNY89_27360</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003704">
        <property type="protein sequence ID" value="PJN92708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002800">
        <property type="protein sequence ID" value="PJN93035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002260">
        <property type="protein sequence ID" value="PJN93255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001559">
        <property type="protein sequence ID" value="PJN93686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8961" checksum="065B967EE4DB8931" modified="2018-04-25" version="1" fragment="single">MAKPLKDRDPTSRTGPDVICFSHLRWDFVLQRPQHLMQRFAHTSRVFFVEEIIPTDHHLPYLEFHAFEGTSVTAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D9</accession>
    <name>A0A2M9P7D9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001855">
        <property type="protein sequence ID" value="PJN93471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008759">
        <property type="term" value="F:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009245">
        <property type="term" value="P:lipid A biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004463">
        <property type="entry name" value="UDP-acyl_GlcNac_deAcase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015870">
        <property type="entry name" value="UDP-acyl_N-AcGlcN_deAcase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33694">
        <property type="entry name" value="PTHR33694"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03331">
        <property type="entry name" value="LpxC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="83"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="100"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12793" checksum="37BBA5C987B72D9B" modified="2018-04-25" version="1" fragment="single">MLTTVKQEIAFVGTGLHSGRPVRMIVRPAATGGLRFRRTDVTDRDNVIPARYDLVNDTRLNTRLTNAAGVSVSTVEHLMAALAGDGRAAVPPDRRDRPRQRHPRALRPRQRHPAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M0</accession>
    <name>A0A2M9P7M0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001761">
        <property type="protein sequence ID" value="PJN93537.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="19"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93537.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7878" checksum="CADC5C9D0076CF3F" modified="2018-04-25" version="1" fragment="single">MILSARNLSKQFAGFKAVSGVDLDVRRGSIHALIGPNGAGKTTCFNLLTKFLQPSSGTITFNGRDITKMPPAEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S1</accession>
    <name>A0A2M9P7S1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001737">
        <property type="protein sequence ID" value="PJN93550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9359" checksum="68BFD481396D816A" modified="2018-04-25" version="1">MLRRSQVIAVEIRQRLDKCLPKRLDRFFVGEVRNVLGQLEFRLIVALAHGKGSSGEVDARILDQRQNMRTIGDALRAMNSPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U0</accession>
    <name>A0A2M9P7U0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001682">
        <property type="protein sequence ID" value="PJN93588.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93588.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="15095" checksum="A045FCFB1C56CF8B" modified="2018-04-25" version="1">MDSVRCYGRNEGFILRNTLFDGPNGDLWRATQATADGDKRHIDFLQFNNGASNALGTCNFLIENNAFYGSFGYHQSIFMFNEKCRENGGNIDDNGHQNGIIRGNYIESRHQHAITLSGHKNVLIEGNLIRTAGEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U4</accession>
    <name>A0A2M9P7U4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19610</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001658">
        <property type="protein sequence ID" value="PJN93607.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="16"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93607.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14804" checksum="FC8E13EF3CE58483" modified="2018-04-25" version="1" fragment="single">SWRLIMENSSTNWIDYLISLSPVLQTAIWACVAILFAWVIKEPIRHLAERLVERVGQGDKIITPYFSIERQEQLNQLDYIQTVSRGEDASTIIRTENSEKSPTSSQEFEAYRQSIYDKIGTYSWRTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y3</accession>
    <name>A0A2M9P7Y3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gfo/Idh/MocA family oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001618">
        <property type="protein sequence ID" value="PJN93635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="18877" checksum="617A7DB36BA4F736" modified="2018-04-25" version="1" fragment="single">YQCPVYLERFTKLSMNARKSYTVRNSNLLQWLFHVGGRRLKLIRNPPPGQKTIIPFAGSLWSPKAAIRRLIRGELGVQDKVVGIAEMADAIKTGRPAFPSSDFTLHLNELTLAIQNAGPQGVSHKLTTSFAPVEPMPGTLNAKVDNRKALRIPLLARLAENLVDRMHRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z1</accession>
    <name>A0A2M9P7Z1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Guanine permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_19515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) family. Azg-like subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001634">
        <property type="protein sequence ID" value="PJN93620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015205">
        <property type="term" value="F:nucleobase transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1904823">
        <property type="term" value="P:purine nucleobase transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045018">
        <property type="entry name" value="Azg-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006043">
        <property type="entry name" value="NCS2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43337">
        <property type="entry name" value="PTHR43337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00860">
        <property type="entry name" value="Xan_ur_permease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16408" checksum="1D395EDABE1796B6" modified="2018-04-25" version="1" fragment="single">MLESYFKLKEHGTNVRTEVIAGITTFLTMAYIIFVNPQILATTGMDQSAVFVATCLAAALGSAIMALYANWPIAMAPGMGLNAFFAFTVVGALGFTWQQALGAVFISGCIFLILTVTGVRRWLVAGIPHSMRSAVAAGIGMFLGIIALKNAEIVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z4</accession>
    <name>A0A2M9P7Z4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001590">
        <property type="protein sequence ID" value="PJN93657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12697" checksum="9B7386A0E980B73E" modified="2018-04-25" version="1">MLFDPRRYLRMIEQEERNQEMRGVEGPPRAIRAIRAIPTEPLGAISTFSTDPAPIADPDALLTLLRERGPMTYGAAATALGWGATRAWQAEAALRAAGRVEHDRFGRAALNARAGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P801</accession>
    <name>A0A2M9P801_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19305</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001595">
        <property type="protein sequence ID" value="PJN93653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="16978" checksum="0FB4747ECCD0C452" modified="2018-04-25" version="1" fragment="single">MDQSSGRMGAEMEQAVSRVAQSIDDLRSAMGATAASTSTALTQGAEQLLGVMNQTLAGIRDNTGEGARAMSAAASEMREAATGFRTELETASRSGAEAARHSLEAAASDASRIVSDSFGRTSAEIAGMATGLAERASQDLIAPIDAIAARIQQVVTELGAGVVEMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P816</accession>
    <name>A0A2M9P816_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001579">
        <property type="protein sequence ID" value="PJN93668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="13255" checksum="A0C8B01E461B6655" modified="2018-04-25" version="1" fragment="single">MRVKLLVPEGGFERQFDDLYCWLDQEVGRGEYALHAASALGISRDAVAVYFRAPETAHRFVARFPDLLLADGTDSVVYTSPYLPFGRPQDEKSPMCNLYSMTRSQEAMRRLFAGLDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P865</accession>
    <name>A0A2M9P865_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AAA_15 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_18780</name>
        <name evidence="3" type="ORF">CNY89_22645</name>
        <name evidence="2" type="ORF">CNY89_25380</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003101">
        <property type="protein sequence ID" value="PJN92917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002341">
        <property type="protein sequence ID" value="PJN93216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001507">
        <property type="protein sequence ID" value="PJN93731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041685">
        <property type="entry name" value="AAA_15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13175">
        <property type="entry name" value="AAA_15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_15" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5179" checksum="54B327E9BAF292A6" modified="2018-04-25" version="1" fragment="single">MKLKSFRVENFRSINDSGDIDVADITALLGRNESGKSNLLLGLRSLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D3</accession>
    <name>A0A2M9P8D3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001451">
        <property type="protein sequence ID" value="PJN93791.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93791.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6469" checksum="5F7BE30460C27C71" modified="2018-04-25" version="1" fragment="single">MPSLIASLAGYRPGWIGRDLAAGLAVAAVSLPSAIAPYTAIAGLPLETRLYASIGRPSIMPCSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F2</accession>
    <name>A0A2M9P8F2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sarcosine oxidase subunit gamma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001416">
        <property type="protein sequence ID" value="PJN93832.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007375">
        <property type="entry name" value="SoxG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04268">
        <property type="entry name" value="SoxG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93832.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15766" checksum="47C09BB271122A83" modified="2018-04-25" version="1" fragment="single">APALPPCAPTSCACGSLPWHTRSSRRCAASASPPDEWLLEVPVEDAAAFLERLSDLGARMPVSAVEVSDREVTLALSGPAVLDLLASGCPRDLARMAVGTGARTVFDTVQVVLTREAEDRFHMTVWRSFAPHVRALLDLAAREIAAGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M5</accession>
    <name>A0A2M9P8M5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DedA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17855</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the DedA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001380">
        <property type="protein sequence ID" value="PJN93879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032818">
        <property type="entry name" value="DedA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032816">
        <property type="entry name" value="SNARE_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30353">
        <property type="entry name" value="PTHR30353"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09335">
        <property type="entry name" value="SNARE_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="20"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="60"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="121"/>
            <end position="141"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU367016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="179" mass="19099" checksum="496F700A18BA2045" modified="2018-04-25" version="1">MEALLDRILEFIRDNAAWAPYIAFVFALFETIAFVSILIPSTVILVGVGGLVATGALQMFPLWIGASLGALVGSTFSWWLGQRYGTNILSVGPLRDQQPTIQRGKDAFARFGPAAVLIGHFFGPLRAVAFVLAGAAAMAFLRFQAANIPGALAWAYVIPKSGEVGGDVLGHLWRSFFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S7</accession>
    <name>A0A2M9P8S7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Znf/thioredoxin_put domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001325">
        <property type="protein sequence ID" value="PJN93938.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011723">
        <property type="entry name" value="Znf/thioredoxin_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005735">
        <property type="entry name" value="Znf_LSD1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13717">
        <property type="entry name" value="zinc_ribbon_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01053">
        <property type="entry name" value="LSD1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02098">
        <property type="entry name" value="MJ0042_CXXC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Znf/thioredoxin_put" evidence="1">
        <location>
            <begin position="1"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93938.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5409" checksum="7C239A63F291835F" modified="2018-04-25" version="1" fragment="single">MRLSCPNCAAIYELSEDRLTPGGSHVQCSECHTRWFARPPALAAPPSPSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X3</accession>
    <name>A0A2M9P8X3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001290">
        <property type="protein sequence ID" value="PJN93983.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93983.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8513" checksum="19194265DD814939" modified="2018-04-25" version="1" fragment="single">MRVDYALQSHWRDPRVAFLAWRSRIEEIGVLVFQASRIESGEASGFAYWADALPFIVVNRKDAYARRVFSLLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P927</accession>
    <name>A0A2M9P927_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Catechol 1,2-dioxygenase</fullName>
            <ecNumber evidence="5">1.13.11.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">catA</name>
        <name evidence="11" type="ORF">CNY89_16835</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>catechol + O2 = cis,cis-muconate + 2 H(+)</text>
            <dbReference type="Rhea" id="RHEA:23852"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:18135"/>
            <dbReference type="ChEBI" id="CHEBI:32379"/>
            <dbReference type="EC" id="1.13.11.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Fe(3+)</name>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="3">Aromatic compound metabolism; beta-ketoadipate pathway; 5-oxo-4,5-dihydro-2-furylacetate from catechol: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.13.11.1" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01001245">
        <property type="protein sequence ID" value="PJN94043.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00157">
        <property type="reaction ID" value="UER00258"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018576">
        <property type="term" value="F:catechol 1,2-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042952">
        <property type="term" value="P:beta-ketoadipate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019614">
        <property type="term" value="P:catechol-containing compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03460">
        <property type="entry name" value="1_2-CTD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007535">
        <property type="entry name" value="Catechol_dOase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012801">
        <property type="entry name" value="Cchol_dOase_prob"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04444">
        <property type="entry name" value="Dioxygenase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02439">
        <property type="entry name" value="catechol_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00083">
        <property type="entry name" value="INTRADIOL_DIOXYGENAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 11" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="10">
        <location>
            <begin position="136"/>
            <end position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004957"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS00083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94043.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="312" mass="34228" checksum="B85BA7417D48FD75" modified="2018-04-25" version="1">MTVKIFDRPDVQEFLRELSGLNNNAGNPRMKEITHRLMSDLFKAVDDLNITPDEYWQGVAWLNDLGAAGQAGLISPGLGLDHFIDERLDAIDASLGIDNPTPRTIEGPLYVAGAPVEQGFARLDDGRDANGHTLVMHGTVHGADGKPLPGAQVEVWHCDTRGFYSHFDPTGLQSDFNMRRTIIADENGRYKFQSILPSGYGVPAGSPTEKVLTALGRHGQRPAHIHFFISADGHRKLTTQINIEGDPLIDDDFAYATREGLVPHVIERTDEESIHANGLNGPFAEIVFDIHLTALVDGADNQINEQRRRAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P994</accession>
    <name>A0A2M9P994_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VapC toxin family PIN domain ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001190">
        <property type="protein sequence ID" value="PJN94116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6832" checksum="CD64ED5D3B5A9B64" modified="2018-04-25" version="1" fragment="single">MIFLLDVNVLIALTDPAHVAHDDAHVWFAETGRHAWATCPITENGVLRILGNPKYPNSPGSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F4</accession>
    <name>A0A2M9P9F4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">EamA/RhaT family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16080</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001150">
        <property type="protein sequence ID" value="PJN94174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6532" checksum="05D1AAAB1E88AC6A" modified="2018-04-25" version="1" fragment="single">MTLAALRPADRPFLGVLLMLGFCVLAPVADAFAKDLGGRVGLFHILALRFAIQTALLAPLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G1</accession>
    <name>A0A2M9P9G1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DNA ligase (NAD(+))</fullName>
            <ecNumber evidence="1">6.5.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_16150</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.5.1.2" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01001160">
        <property type="protein sequence ID" value="PJN94162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003911">
        <property type="term" value="F:DNA ligase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033136">
        <property type="entry name" value="DNA_ligase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013839">
        <property type="entry name" value="DNAligase_adenylation"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013840">
        <property type="entry name" value="DNAligase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004150">
        <property type="entry name" value="NAD_DNA_ligase_OB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010994">
        <property type="entry name" value="RuvA_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004149">
        <property type="entry name" value="Znf_DNAligase_C4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01653">
        <property type="entry name" value="DNA_ligase_aden"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03120">
        <property type="entry name" value="DNA_ligase_OB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03119">
        <property type="entry name" value="DNA_ligase_ZBD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00532">
        <property type="entry name" value="LIGANc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47781">
        <property type="entry name" value="SSF47781"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01056">
        <property type="entry name" value="DNA_LIGASE_N2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3" id="KW-0235">DNA replication</keyword>
    <keyword evidence="2 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="7" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LIGANc" evidence="8">
        <location>
            <begin position="3"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="357"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="357" mass="38158" checksum="115CFE45243AC952" modified="2018-04-25" version="1" fragment="single">REGAEAGDDFVGGLVDGVALHGHRARAAGAAARPLHFFAYGWGETSEPLGETQSGAMARLRGLGFVTNPLGLVCDDVEALLACYRGIEVQRATLGYDIDGVVYKVDDLALQARLGFRSTTPRWALAHKFSAQRASTLLEAIDIQVGRTGALSPVARLTPVTVGGVVVANATLHNADYIAGRDSKGQPIREGRDIRVGDWVTVYRAGDVIPKIEDVDLSRRPADSVPYAFPKTCPICGSDAVREEGEAAVYCTGGLICPAQAMEKLKHFVSRGAFDIEGLGAKAVEAFFADGWIREPADIFTLADRHGPGRPTQVKNREGWGGKSAENLFAAIEQRRAIPLDRLIFGLGIRHVGETAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W3</accession>
    <name>A0A2M9P9W3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Nucleoside deaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_15180</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001045">
        <property type="protein sequence ID" value="PJN94327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016192">
        <property type="entry name" value="APOBEC/CMP_deaminase_Zn-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002125">
        <property type="entry name" value="CMP_dCMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00383">
        <property type="entry name" value="dCMP_cyt_deam_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00903">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51747">
        <property type="entry name" value="CYT_DCMP_DEAMINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="CMP/dCMP-type deaminase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17514" checksum="A6EF4FB9EF62C7B5" modified="2018-04-25" version="1">MYEEAFMRRAVAISAEALTNPGTEPFGAVVVRDGRIVGEGINRSLQNFDPTSHGETEAIRDACRNLATLDLTGCDIYTSCEPCPLCVAAMTIAGIGRLYYAASMDQAGAAFEGLTPAMRHPIDVDLLTSECAAPVHGRRLPAKQGMSKEAAEILRAWAAARKEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA80</accession>
    <name>A0A2M9PA80_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">TonB-dependent receptor</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_14460</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell outer membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000972">
        <property type="protein sequence ID" value="PJN94446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.170.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039426">
        <property type="entry name" value="BtuB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000531">
        <property type="entry name" value="TonB-dep_rcpt_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036942">
        <property type="entry name" value="TonB_rcpt_b-brl_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30069">
        <property type="entry name" value="PTHR30069"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00593">
        <property type="entry name" value="TonB_dep_Rec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0675">Receptor</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TonB_dep_Rec" evidence="3">
        <location>
            <begin position="3"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="269" mass="29518" checksum="817F7F1D76E62D9F" modified="2018-04-25" version="1" fragment="single">DPRTSSWIAGAWLQAAWTPTEAFAFNASGRVDDHSEFGYFPTARATFAWLVTPQTTIRGSLANGFRAPSNYELFSSTGDQDLEPETSVSADLGVARSFAEGRGAASATVFWLEIEDLIEYDAAIPPFGGYTQTDGTAKSRGVELAADWTFMEAFALRGAYTYTDAEQSDGEPRNRIPKHDLSLTASGAWQRLSYDLGANFVWDYVDQTGSPSAGWSDDFVVVNARLAYAVTERAEVYLRGENLLDEQYQTARGYSTSDRAFYAGVSARF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA90</accession>
    <name>A0A2M9PA90_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1244 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000958">
        <property type="protein sequence ID" value="PJN94465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023163">
        <property type="entry name" value="SMc04008-like_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036810">
        <property type="entry name" value="SMc04008-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06844">
        <property type="entry name" value="DUF1244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158757">
        <property type="entry name" value="SSF158757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1244" evidence="1">
        <location>
            <begin position="27"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10578" checksum="17679EF237185AFE" modified="2018-04-25" version="1">MDDATRTELEAAAFRALRDHLASRPDVQNIDLMNLAGFCRNCLSRWWQEAAEARGVAVTKDEAREAFYGMPYADWVAANQTEASPEAKAKFSGSH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK9</accession>
    <name>A0A2M9PAK9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13705</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000897">
        <property type="protein sequence ID" value="PJN94576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8781" checksum="8B99C4F3A2506B48" modified="2018-04-25" version="1">MRASADSAVWPEGVRSRATTRLPSSGLLRSDRMRKPSALATWRDSRVRPSAVISYWRYFCPDGRAGAGGGTVPGGLRGFRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU0</accession>
    <name>A0A2M9PAU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13200</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000844">
        <property type="protein sequence ID" value="PJN94658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7053" checksum="138F2D6CA45942AB" modified="2018-04-25" version="1">MIGAACCAATPDGAPNGMNRNAATATALVTLNMPFLPLVGSPCPTAISDLNSVPGAARAGPPGVMSPRRPPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW9</accession>
    <name>A0A2M9PAW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Flagellar motor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_13015</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000828">
        <property type="protein sequence ID" value="PJN94690.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0966">Cell projection</keyword>
    <keyword evidence="4" id="KW-0969">Cilium</keyword>
    <keyword evidence="4" id="KW-0282">Flagellum</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpA-like" evidence="3">
        <location>
            <begin position="1"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94690.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9938" checksum="D4782B57DCEFF276" modified="2018-04-25" version="1" fragment="single">RSPPRSPWVLRVDGHTDRTPLSPGSPFRDNWELSQARALSVVRFLIDAEGFPANRVAATGFGEFQPVDPGTSPEALARNRRIELKLTER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB41</accession>
    <name>A0A2M9PB41_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000789">
        <property type="protein sequence ID" value="PJN94756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011045">
        <property type="entry name" value="N2O_reductase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022456">
        <property type="entry name" value="PQQ_b_propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011964">
        <property type="entry name" value="YVTN_b-propeller_repeat"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50974">
        <property type="entry name" value="SSF50974"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02276">
        <property type="entry name" value="beta_rpt_yvtn"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03866">
        <property type="entry name" value="PQQ_ABC_repeats"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014760840" evidence="1">
        <location>
            <begin position="18"/>
            <end position="317"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="34448" checksum="76CC709BFD584E51" modified="2018-04-25" version="1">MRIAALVLATLPMAASAGEIWVTNEKDDTITVVDADSLEVLREIGVGERPRGITFNSDFSRAYVCASDSDTVQVIDPATGEILHDLPSGEDPEQFVLSPDDRHLWIANEDDAITTVVDVETRQVVAQVDVGIEPEGMAISPDGKIAITTSETTNMAHWIDTSTMEIFANTLVDARPRHAEFAKGGTELWVSSEIGGTVTVFDVATQREKAKIRFGIRGVNDDLLQPVGFEFTPDGKTAFVALGPANHVAAVNAETYEVEDYILVGRRVWHLAFSPDHERLFTTNGVSGDVTVIDVARREAVKSVKVGRYPWGAASRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB68</accession>
    <name>A0A2M9PB68_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Flagellar P-ring protein</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">Basal body P-ring protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 7" type="primary">flgI</name>
        <name evidence="7" type="ORF">CNY89_12420</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the FlgI family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000774">
        <property type="protein sequence ID" value="PJN94784.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009428">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod, P ring"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00416">
        <property type="entry name" value="FlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001782">
        <property type="entry name" value="Flag_FlgI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30381">
        <property type="entry name" value="PTHR30381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02119">
        <property type="entry name" value="FlgI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01010">
        <property type="entry name" value="FLGPRINGFLGI"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="7" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015016182" description="Flagellar P-ring protein" evidence="6">
        <location>
            <begin position="22"/>
            <end position="368"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00019515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032344"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94784.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="368" mass="38485" checksum="3F04A32C3260F1FA" modified="2018-04-25" version="1" precursor="true">MRILACLLLVICAFLPGPGIAAPARIKDLVDIDGVRGNDLLGYGLVVGLNNTGDSLRNSPFTEDAIVNLLERLGVNVTGEQIRARNVAAVLVTGSLPPFARAGSQMDVTVSAIGDAKSLMGGTLVLTPLNAADGQIYAVAQGSIIAGGIVAEGEASSVTQGVPTSGLIPSGARVEREVAYDFSQAAELRLALRNPDFTTAARIERAINREVGERIARMMDSGTIRLDLAGFGIERPALLMAQIENIEVQTSTRARVVVDQRSGTIILGENVRISRVAVTQGSITLRVEEEPLVVQPNPFANGQTVVIPRTDASIEEDPGTGLALVETSVSLPEVVAGLNALGVSANDMIDILKSIKAAGALHAEFIVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB70</accession>
    <name>A0A2M9PB70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000779">
        <property type="protein sequence ID" value="PJN94775.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94775.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8265" checksum="EA102B01FD02EC2B" modified="2018-04-25" version="1" fragment="single">MWRSALDGARLPGLERRRPRNRSPDDRALPLRRGALRPLSRALQHGRPHLRRRGADPRQGGAGGRHGPRPGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB87</accession>
    <name>A0A2M9PB87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Acetylornithine transaminase</fullName>
            <ecNumber evidence="4">2.6.1.11</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12300</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.11" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000762">
        <property type="protein sequence ID" value="PJN94804.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003992">
        <property type="term" value="F:N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00610">
        <property type="entry name" value="OAT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004636">
        <property type="entry name" value="AcOrn/SuccOrn_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000521">
        <property type="entry name" value="Transaminase_4ab_Lys_Orn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00707">
        <property type="entry name" value="argD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00600">
        <property type="entry name" value="AA_TRANSFER_CLASS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="347"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94804.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="347" mass="36442" checksum="E00FC6806964B651" modified="2018-04-25" version="1" fragment="single">MIPPVLPTYARAPLAFVEGEGPWLVTDKGERYLDLGAGIAVTLLGHANPALVAALEAQARKLWHTSNLYQIPNQEALAERLVAHTFADTVFVTNSGTEAIECAIKMARKHFDAEGQPERTRIIAFEGSFHGRSYGAISAAGSEKMVRGFGPVVPGFDHLPFFDLDQVRATIGPETAAVLVEPIQGEGGIRALSADQLRGLRALCDETGVLLILDEIQCGMGRTGKLFHHEWAGIAPDIMTVAKGIGGGFPLGACLATEKAASGMVLGTHGSTYGGNPLACAVGIAVMDIVTAPGFLDQVSRIGGRLRQGLEGLVASHPGVFEGVRGEGLMLGLKCRVAPAEVVKAGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB98</accession>
    <name>A0A2M9PB98_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000763">
        <property type="protein sequence ID" value="PJN94802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003781">
        <property type="entry name" value="CoA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13380">
        <property type="entry name" value="CoA_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00881">
        <property type="entry name" value="CoA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CoA_binding" evidence="1">
        <location>
            <begin position="9"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10360" checksum="1F2B7823B470EE4C" modified="2018-04-25" version="1" fragment="single">MSVRNLQYVLRPASVAVFGASERPGSLGEAVTRNLLAGGFKGPIHLVNPRHETVMGRPCFASAADLPDPPELSAIVAPADLVPRTVAEIGAAGGKAAVVFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB1</accession>
    <name>A0A2M9PBB1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ftsk_gamma domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12210</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000755">
        <property type="protein sequence ID" value="PJN94818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018541">
        <property type="entry name" value="Ftsk_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09397">
        <property type="entry name" value="FtsK_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00843">
        <property type="entry name" value="Ftsk_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ftsk_gamma" evidence="2">
        <location>
            <begin position="19"/>
            <end position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00843"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8913" checksum="77DADE8833CE4120" modified="2018-04-25" version="1">MSQISEMTDQVGCSGFENGRALQPYDPAAAIVAKNRKRSTSSIQRKLSVGHNKAAKLVELMEEAGVASQANQAGKREVLAPER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF4</accession>
    <name>A0A2M9PBF4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EamA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000728">
        <property type="protein sequence ID" value="PJN94859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="99"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="5"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="13714" checksum="F7D0C8166852376A" modified="2018-04-25" version="1" fragment="single">LAATRGATTRTDPLSTLAAQCLLGAALLAPFALAQGTPRITPELVTGALALGAISALCHFLTVAAYQRAEATVLAPFLYFNMITAMAAGYFWFGETLSPASLIGLGGIAAGGLVTLLGARLPAVGRGLPARLRFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ5</accession>
    <name>A0A2M9PBJ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000704">
        <property type="protein sequence ID" value="PJN94905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038444">
        <property type="entry name" value="DUF465_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="10"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8474" checksum="A8FBA2E581A86EF3" modified="2018-04-25" version="1">MTEPPLLQREEMLRIRLELLQREHRDLDDAIAALDLALRADPLTVRRLKKRKLMLKDEMARISDEITPDIIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK2</accession>
    <name>A0A2M9PBK2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1428 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000697">
        <property type="protein sequence ID" value="PJN94917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009874">
        <property type="entry name" value="DUF1428"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07237">
        <property type="entry name" value="DUF1428"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF007028">
        <property type="entry name" value="UCP007028"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="13062" checksum="E9B140C4A42453C9" modified="2018-04-25" version="1">MAYVDGFVAAVPTANKDKYLRHANEAAAIFREYGALEVVECWGDDVPEGETTSFTLAVKRQDDETAVFAWIRWPSKAARDEAWTKIMADPRMAPDRAPMPFDGKRMIYGGFAQILSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN8</accession>
    <name>A0A2M9PBN8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000683">
        <property type="protein sequence ID" value="PJN94944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14817" checksum="9E8D9E34DC635EEA" modified="2018-04-25" version="1">MDAHSFMPQVEVLPVTDSGRRRRWSAAEKVRIVEESLSVPRSAAATARRHDVSRTLLTRWRKEYREGLLGHEPSVAFAPVMIAAAPPKAEAPRAPEPESACADTLAITLVNGRHVVVPAMIDPVLLARLLPVLDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR5</accession>
    <name>A0A2M9PBR5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF1153 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000662">
        <property type="protein sequence ID" value="PJN94986.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009534">
        <property type="entry name" value="DUF1153"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010921">
        <property type="entry name" value="Trp_repressor/repl_initiator"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06627">
        <property type="entry name" value="DUF1153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48295">
        <property type="entry name" value="SSF48295"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94986.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10473" checksum="F0839C98CCC634B2" modified="2018-04-25" version="1">MYIRREKGPVFVMLPDGSKLTRSDLPPVTTKRWVARRKATVVAAVDNGLLDPVEACEMYRLSPEELDIWRTAVHRHGAGALRVTAIQKYRQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV5</accession>
    <name>A0A2M9PBV5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000641">
        <property type="protein sequence ID" value="PJN95030.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95030.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11166" checksum="BC9C153AE14DFE7D" modified="2018-04-25" version="1" fragment="single">MIVLAQFAGQGYVVVGADCLDLGLSTEPDGYIAKARHQQAGADMLAVSREMLAGLGVATTKELFLAGWSQGGFVTLGLLLRTYHGVPGLARSVITDEIYEVVRRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX7</accession>
    <name>A0A2M9PBX7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Fructose-bisphosphate aldolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000634">
        <property type="protein sequence ID" value="PJN95045.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004332">
        <property type="term" value="F:fructose-bisphosphate aldolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002915">
        <property type="entry name" value="DeoC/FbaB/LacD_aldolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041720">
        <property type="entry name" value="FbaB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01791">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF038992">
        <property type="entry name" value="Aldolase_Ia"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01133">
        <property type="entry name" value="DeoC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95045.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="309" mass="32701" checksum="AEB1A5D977C09D3B" modified="2018-04-25" version="1">MRASRTVQKILANYEGETPGVKAGLCRILMEGKLGGTGKVIILPVDQGFEHGPARTFAANPAGYDPHYHYQLAIDAGLNAYAAPLGMIEAGSDTFAGQIPTILKVNSANSLLSDSAGKNQAITGSVDDAARLGCVAIGFTIYPGSDAQLDMYEEIVEMRKEAASRGIATVIWSYPRGEAITKDGETAIDVAAYAAQIAALLGAHIIKIKLSTDHLMLPEAKKVYEDKKIDISTQAKRVAHCMDASFGGRRIVVFSGGAAKGEDAVYDDARAIRDGGGNGSIIGRNSFQRARPDALAMLAKLVEIYKGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY4</accession>
    <name>A0A2M9PBY4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cell division protein ZapA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000649">
        <property type="protein sequence ID" value="PJN95012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.160.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007838">
        <property type="entry name" value="Cell_div_ZapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036192">
        <property type="entry name" value="Cell_div_ZapA-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042233">
        <property type="entry name" value="Cell_div_ZapA_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05164">
        <property type="entry name" value="ZapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102829">
        <property type="entry name" value="SSF102829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6770" checksum="4CAD687976906E27" modified="2018-04-25" version="1" fragment="single">MPELTIEIGGRVFEVACEPGQEPSLARAAQLLDIEANRVGEAIGRSTEKRMLLLAGLMVADTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC35</accession>
    <name>A0A2M9PC35_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Cytochrome c family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_10725</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000625">
        <property type="protein sequence ID" value="PJN95062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002327">
        <property type="entry name" value="Cyt_c_1A/1B"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11961">
        <property type="entry name" value="PTHR11961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00034">
        <property type="entry name" value="Cytochrom_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00604">
        <property type="entry name" value="CYTCHRMECIAB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 5" id="KW-0349">Heme</keyword>
    <keyword evidence="4 5" id="KW-0408">Iron</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014650799" evidence="6">
        <location>
            <begin position="25"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="7">
        <location>
            <begin position="27"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15816" checksum="F928122937E540D9" modified="2018-04-25" version="1">MRRHSRPALAAALASAFLAAPALAQEGDPVAGEKAFRKCAACHSIEPGAPSKIGPNLHDVVGRVTGTFEGFKYSDAMTKAGQEGHVWTVEELNIYLENPKTAMPGNKMTFVGVKKPEERADLIAYLVSLNPAGARRQRPPRPTDPSPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC75</accession>
    <name>A0A2M9PC75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000584">
        <property type="protein sequence ID" value="PJN95141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11854" checksum="D43AA51B6AA8C78D" modified="2018-04-25" version="1" fragment="single">VTPPGASDWLMSAMAAFMLLAILGVGIFYLKLHALPEHMAHRSQKVQMQFVAVLGLLALFTHNHLFWVAALLLALVDLPDFGTPMASMAASLEKMSGRTPADPAVPEEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD6</accession>
    <name>A0A2M9PCD6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sodium/glutamate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000567">
        <property type="protein sequence ID" value="PJN95183.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015501">
        <property type="term" value="F:glutamate:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015813">
        <property type="term" value="P:L-glutamate transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004445">
        <property type="entry name" value="GltS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36178">
        <property type="entry name" value="PTHR36178"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03616">
        <property type="entry name" value="Glt_symporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="106"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="134"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="200"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95183.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="230" mass="24160" checksum="73D252B30AF811DE" modified="2018-04-25" version="1" fragment="single">GAVVGGPLARLLIEPRGLKSDDPDEVNTVGMVDDAPSGHLVSRSELMRALLVTFLCIILGWFAHRAILSTGLMLPLFVPCLLVGMLVGNLLALFPKLPPVSHTPALALLSEFALGVFLAISLMALQLWALAGMAGTLLLVLTAQTLLALGFAYFLAFRFLGRDYQAAVLSAGYASFVVGATPTAIATMTAVTKRYGPAPAAFIVLPLVSALFVDLANALVTQGFLTIWAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN8</accession>
    <name>A0A2M9PCN8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09215</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000505">
        <property type="protein sequence ID" value="PJN95317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="208"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="69"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="27445" checksum="AB2E483A7B673336" modified="2018-04-25" version="1" fragment="single">MATRQTEGIARLMRLPSIGLLLIWMIVPLSLTVYFSFRYYNLLNPSASGWAGFENYSYFLSDPAFWQAIRNTLTIVLGVLAITVVGGIGVALLIDQPIFGQGIVRILVISPFFVMPPVAALVWKNMILHPGYGVSAEIAQFFGLQPIDWFSSYPLFAIIVIVAWQWLPFATLILLTSLQSLDSEQKEAAEMDGAGFVSRFWHLTLPHMARAITIVVLIQTIFLLGVYAEILVTTNGGPGYASTNLPFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ0</accession>
    <name>A0A2M9PCQ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09155</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000501">
        <property type="protein sequence ID" value="PJN95327.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014754292" evidence="1">
        <location>
            <begin position="24"/>
            <end position="500"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="104"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="379"/>
            <end position="483"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95327.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="500" mass="55456" checksum="BB6470319E193644" modified="2018-04-25" version="1">MHKRPVLLALMASAALSATSASAETYKYQTQTPPGVAAPDSVETRLGTLKFESGYPDDATARAIYDNLDFQRAVQSYMLALPPVNQAANRNAIRPLGPVNRTVPIFEQLVTPEQIFLTANDNTVYSWAWLDLKDGPMVVEVPPKVLGLVDDMWYHWVIDVGITGADKGEGGKYLFLPPGYAGDVPAGDFVEVVHAPTYNLWMPWRSFLVDGDPKPGVELVKAHTRFYPLGGKPEEMTYVDLSSKGYFNTVNPAGYEFWELLNQVVQEEPAGSLDPVTAGFFASIGIEHGKPFAPDERMKKILTEAAAVGDATARTIAFQSRDKDFFYYDDSHWQVGFVGGYEFQSQPGVDNLDGASFFYFLATGVTPAMEEKLIGKGSQYMWTAHDKDGAPLDGGKTYHMRLPKDVPVKDFWSVILYSNQTRSMIQTDQLHPSVSSQQKDLMVNDDGSIDIWFGPKAPDGKESNWVQTAPGQTWNAILRLYGALEPFYDQSWRPGEIEAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV0</accession>
    <name>A0A2M9PCV0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000478">
        <property type="protein sequence ID" value="PJN95375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="47"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10940" checksum="F75757CE45352158" modified="2018-04-25" version="1">MLARRKLRPVRFVNALFNSRFNQMQPQVTPQHRHNLAEAAKRRHAKARAAEAECASLRAEVARLREVNREQAADLRDMRTEVAAVRATLNRLGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD25</accession>
    <name>A0A2M9PD25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000457">
        <property type="protein sequence ID" value="PJN95424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8955" checksum="03251E542F7F5D3A" modified="2018-04-25" version="1" fragment="single">ANGQVFTGRLALERGLVDEIGGEREGLAWLESTDPDLAELPVEDWMVERERGIMGSILGSAGPSGGILGEISRFLGPRLYSLGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD98</accession>
    <name>A0A2M9PD98_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pyruvate carboxyltransferase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08185</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the HMG-CoA lyase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000428">
        <property type="protein sequence ID" value="PJN95493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016833">
        <property type="term" value="F:oxo-acid-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043594">
        <property type="entry name" value="HMGL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000891">
        <property type="entry name" value="PYR_CT"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42738">
        <property type="entry name" value="PTHR42738"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00682">
        <property type="entry name" value="HMGL-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyruvate carboxyltransferase" evidence="3">
        <location>
            <begin position="4"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00682"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="17883" checksum="9AC6AB4488AAD0DA" modified="2018-04-25" version="1">MSEVTIYEVGPRDGLQNEARAIPTAQKIALVDMLSATGLRRIEVTSFVSPRWIPQLADGAQVLAGIRRAPGVAYAVLVPNLKGFEAARASGVEEVAIFTAASETFSRRNINATIQESLERFAPVAEAAAAASVAAASRTGVTTVKSGAEVMNGAGLTGRAAGWCAGAADRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB3</accession>
    <name>A0A2M9PDB3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000418">
        <property type="protein sequence ID" value="PJN95519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="27780" checksum="0558E08817D1FF91" modified="2018-04-25" version="1">MRHLRRLRTFLGRLIRDVARKVEGDPDRKAAFAHTLARARRIHGQRPGDADKLYAFHAPEVECIARGKARARYEFGVKTSVAVTNARQPGGQFVLGAQTLPGAPYDGHSLAAQIDQVARLTGRTVQRAYVDRGYRGHGVVREGLQVVLSHTRGILSPTIRREMRRRNAIEPVLGHMKTDGLLERNHLHGPDGDAVNAILCAVGHNCRLLLAWFRRLLAYLITAAPSIVAEFLRAIAAIRQPRPTRQILAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD5</accession>
    <name>A0A2M9PDD5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Toprim domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000396">
        <property type="protein sequence ID" value="PJN95565.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13362">
        <property type="entry name" value="Toprim_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Toprim" evidence="1">
        <location>
            <begin position="162"/>
            <end position="254"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13362"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95565.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="28525" checksum="52E321BF0B5D507A" modified="2018-04-25" version="1" fragment="single">AEARQREEAEREKAVERSRASAHRLWLGCHQRLNDTPVAAYLAARGIGLAQLGRTPNAIRYAPRLPYRHVDPETGEIFEGEYPAMVTAIMGPHVAGEPAAFWGAHRTWLAQEPGGRWWKAPVPKPKKVLGSIKGGYIRLWAGFGPRGGHGAPLSRAPHGTSVFVAEGIETGLSAAVLRPDARVLAAVSLGNFRDMVLPPQVARVIVIRDHDTNPKNRAQVDRAKERWLGEGRAVGDWECPEGGKDLNDVLMAALRAEGQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE4</accession>
    <name>A0A2M9PDE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000412">
        <property type="protein sequence ID" value="PJN95532.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95532.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6662" checksum="F58971C14EA537CD" modified="2018-04-25" version="1">MSLYLGIDLGTSSVKAALFDADQRLIGQASRSLEVSRPQGRRLGVRQTGERAQFSKRTIPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP4</accession>
    <name>A0A2M9PDP4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Glucohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07095</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyl hydrolase 13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000352">
        <property type="protein sequence ID" value="PJN95670.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.400.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022567">
        <property type="entry name" value="DUF3459"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045857">
        <property type="entry name" value="O16G_dom_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11941">
        <property type="entry name" value="DUF3459"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aamy" evidence="3">
        <location>
            <begin position="15"/>
            <end position="408"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95670.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="547" mass="60927" checksum="644340B7061E9401" modified="2018-04-25" version="1">MPETAAWWRRATAYQIYPRSFCDSDGDGIGDIPGIVSRLDHLRDLGIGFIWLSPVYASPMIDNGYDISDYQAIAPEFGTLADFDRLVAEARARGIGIVMDLVVNHSSSEHRWFKAARASRAAAEHAFYVWREPAADGGPPDDLQSYFGGSAWEFVPEVGLYYLHLFAREQPDLNWRDPKLRAEIHAMMNWWFDRGVAGFRMDVIDLIGKDVDRGLIAAGPYLHEYIQEMHRETLKGRDVVTVGETWSVTPDTGLLYCGRDRGELSMVFQFDHVKIGWDETHGKWRPLPFDLVAFKKVFTDWQLALAEDGWNSLFLSNHDLPRQVSRYGDDGAFRVRSARMLATVLHLMKGTPYVYQGEEIGMTNVAFDRMEQFRDVETSGQHAEATLRGVTTEAFIAGANANGRDNARTPMQWSAGPGAGFTTGEPWIEVNPNAAEVNVEADRADPEGVFEHYRKLIALRRELPVIVEGRYVPFAEDDASVFAYARVLDGQRLSVVANFTGAEVGFDVPEGLGGTGRCVVANCGAREGLAGRITLAPYEAVAVLMEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT1</accession>
    <name>A0A2M9PDT1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Diaminopimelate decarboxylase</fullName>
            <shortName evidence="2">DAP decarboxylase</shortName>
            <shortName evidence="2">DAPDC</shortName>
            <ecNumber evidence="2 3">4.1.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 6" type="primary">lysA</name>
        <name evidence="6" type="ORF">CNY89_07070</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Specifically catalyzes the decarboxylation of meso-diaminopimelate (meso-DAP) to L-lysine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>H(+) + meso-2,6-diaminoheptanedioate = CO2 + L-lysine</text>
            <dbReference type="Rhea" id="RHEA:15101"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:32551"/>
            <dbReference type="ChEBI" id="CHEBI:57791"/>
            <dbReference type="EC" id="4.1.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 2 3">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 3">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; L-lysine from DL-2,6-diaminopimelate: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.20" evidence="2 3"/>
    <dbReference type="EMBL" id="PHNO01000350">
        <property type="protein sequence ID" value="PJN95674.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00027"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008836">
        <property type="term" value="F:diaminopimelate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06828">
        <property type="entry name" value="PLPDE_III_DapDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.37.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02120">
        <property type="entry name" value="LysA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009006">
        <property type="entry name" value="Ala_racemase/Decarboxylase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002986">
        <property type="entry name" value="DAP_deCOOHase_LysA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022643">
        <property type="entry name" value="De-COase2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022657">
        <property type="entry name" value="De-COase2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022644">
        <property type="entry name" value="De-COase2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022653">
        <property type="entry name" value="De-COase2_pyr-phos_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000183">
        <property type="entry name" value="Orn/DAP/Arg_de-COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029066">
        <property type="entry name" value="PLP-binding_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02784">
        <property type="entry name" value="Orn_Arg_deC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00278">
        <property type="entry name" value="Orn_DAP_Arg_deC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01181">
        <property type="entry name" value="DAPDCRBXLASE"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01179">
        <property type="entry name" value="ODADCRBXLASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50621">
        <property type="entry name" value="SSF50621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51419">
        <property type="entry name" value="SSF51419"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01048">
        <property type="entry name" value="lysA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00878">
        <property type="entry name" value="ODR_DC_2_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00879">
        <property type="entry name" value="ODR_DC_2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="2 3" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="2 3" id="KW-0456">Lyase</keyword>
    <keyword evidence="2 3" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Orn_DAP_Arg_deC" evidence="4">
        <location>
            <begin position="30"/>
            <end position="373"/>
        </location>
    </feature>
    <feature type="domain" description="Orn_Arg_deC_N" evidence="5">
        <location>
            <begin position="36"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="region of interest" description="Pyridoxal phosphate binding" evidence="2">
        <location>
            <begin position="275"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="239"/>
        </location>
        <ligand>
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="278"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="314"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="318"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="347"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="375"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95674.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="45833" checksum="5E00A67C68C87A3F" modified="2018-04-25" version="1">MDHFLYRGGVLHAEDVPLTEIAAAVGTPAYVYSAATLTRHYRVFDEALAGMPHLVCYAMKANSNLAVVALLGALGAGMDVVSGGEYRRARAAGVPGERIVFSGVGKTREEMRLALEGGVRQFNVESEPELFALSEVASGLGLRAPIAIRVNPDVDAKTHAKIATGKSENKFGIPIARARAVYAIAAALPGIEVVGVDVHIGSQLTELAPFESAFLKVAELTEALREDGHVIRRLDLGGGLGIPYERTNEAPPLPFDYGEVIRRTVGRLGCEIEIEPGRLIAGNAGVLLSRVIYVKRGEGRDFLILDAAMNDLVRPAMYDAWHDLVPVIEPPAGGDLAAFDVVGPVCETGDTFARARMLPPMEAGDLAAFRSAGAYGAVMASEYNSRPLVPEVLVSGDHFQVVRARPSFDEMLARDTIPSWIGRGSPPTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE19</accession>
    <name>A0A2M9PE19_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Plasmid partitioning protein RepB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06360</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000300">
        <property type="protein sequence ID" value="PJN95800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7745" checksum="B30EE998BC9446DB" modified="2018-04-25" version="1" fragment="single">MARKGLFTEFSPAPRPKETAPAPEGAARAPLMPRGAVGALQSSLARMQANAVQDVAPELIDHAGVEDRLAHDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE80</accession>
    <name>A0A2M9PE80_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DNA recombination protein RmuC homolog</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06285</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in DNA recombination.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the RmuC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000296">
        <property type="protein sequence ID" value="PJN95814.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003798">
        <property type="entry name" value="DNA_recombination_RmuC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30563">
        <property type="entry name" value="PTHR30563"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02646">
        <property type="entry name" value="RmuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="127"/>
            <end position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003416"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95814.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="16991" checksum="D0BEB12FE9AD93F5" modified="2018-04-25" version="1">MQHDRHVLARLQMMFLPSEAVYAELHANFGELVREGFGLRVWIVSPTTCMATLTTLRAVLKDARLKAEAHAIRRELSLLGKDLERLGTRVGNLDRHFGQASADLAELRISAERAAVRARRLEEVEFAPEDEEPPVRRTPRIETGPANSRLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB3</accession>
    <name>A0A2M9PEB3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Anthranilate phosphoribosyltransferase</fullName>
            <ecNumber evidence="4">2.4.2.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4 7" type="primary">trpD</name>
        <name evidence="7" type="ORF">CNY89_05910</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>diphosphate + N-(5-phospho-beta-D-ribosyl)anthranilate = 5-phospho-alpha-D-ribose 1-diphosphate + anthranilate</text>
            <dbReference type="Rhea" id="RHEA:11768"/>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <dbReference type="ChEBI" id="CHEBI:18277"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="4">Binds 2 magnesium ions per monomer.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 2/5.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the anthranilate phosphoribosyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.18" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000275">
        <property type="protein sequence ID" value="PJN95879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00035">
        <property type="reaction ID" value="UER00041"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004048">
        <property type="term" value="F:anthranilate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000162">
        <property type="term" value="P:tryptophan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1030.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00211">
        <property type="entry name" value="TrpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005940">
        <property type="entry name" value="Anthranilate_Pribosyl_Tfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000312">
        <property type="entry name" value="Glycosyl_Trfase_fam3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017459">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036320">
        <property type="entry name" value="Glycosyl_Trfase_fam3_N_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035902">
        <property type="entry name" value="Nuc_phospho_transferase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43285">
        <property type="entry name" value="PTHR43285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02885">
        <property type="entry name" value="Glycos_trans_3N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00591">
        <property type="entry name" value="Glycos_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47648">
        <property type="entry name" value="SSF47648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52418">
        <property type="entry name" value="SSF52418"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01245">
        <property type="entry name" value="trpD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="1 4 7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 4" id="KW-0822">Tryptophan biosynthesis</keyword>
    <feature type="domain" description="Glycos_trans_3N" evidence="6">
        <location>
            <begin position="15"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_3" evidence="5">
        <location>
            <begin position="76"/>
            <end position="324"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="4">
        <location>
            <begin position="84"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="4">
        <location>
            <begin position="91"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoribosylpyrophosphate binding" evidence="4">
        <location>
            <begin position="109"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="112"/>
        </location>
        <ligand>
            <name>anthranilate</name>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="121"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="167"/>
        </location>
        <ligand>
            <name>anthranilate</name>
            <dbReference type="ChEBI" id="CHEBI:16567"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="226"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022822"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00591"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="35253" checksum="28E571CA672E6DC0" modified="2018-04-25" version="1">MSDRLKPLIARAIEGPLTRAQAEAAFAAIMEGEATPAQIGGFLMILRTRGETVDEYAAAASVMRAKCVKVHAPEGAMDIVGTGGDGKGTLNISTATAFVVAGAGVVVAKHGNRNLSSKSGAADALTELGVNVMVGAEVVERALREVGIGFMMAPMHHPAVRHVMPARSELGTRTIFNILGPLTNPASVRRQLTGAYSRSVIRPMAETLAALGSDRAWLVHGADGTDEMSIAGETHVVELRDGQIMEFSIHPEMAGLPVHPFVAVEGGTPAQNAAALRDLLDGARSAYRDAVLLNAAAALIIADKARDLSEGVEMAAASIDGGAAKGKAEALARLSQAEAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI4</accession>
    <name>A0A2M9PEI4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000244">
        <property type="protein sequence ID" value="PJN95961.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011929">
        <property type="entry name" value="Phage_pept_NlpC/P60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02219">
        <property type="entry name" value="phage_NlpC_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NlpC/P60" evidence="2">
        <location>
            <begin position="10"/>
            <end position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95961.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17206" checksum="FF7FFC6CEE290EC2" modified="2018-04-25" version="1">MDRADAATEAASGEEVVARARLWIGTPYQHQASCRGAGTDCLGLLRGLWREMLGAEPEEVPAYTPDWSEPARTEDLLLAARRHLIAIEVERRAAGDVAVMRMSENAVAKHVGVISRSDAGFETLIHAYSGHGVVESSLTPAWRRRIAAVFRFPKRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER4</accession>
    <name>A0A2M9PER4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LuxR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04845</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000212">
        <property type="protein sequence ID" value="PJN96050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005143">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036693">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03472">
        <property type="entry name" value="Autoind_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75516">
        <property type="entry name" value="SSF75516"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="149"/>
            <end position="214"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23503" checksum="B6254C3D17E2618D" modified="2018-04-25" version="1">MDAKVQIGRGSALDIAEWTESDGARRLAPAGHYIAVRISFAFPLVEQNCLPESWIREYTASGLLVHDPAMIWAHQNQGYVRTSDLADDDSQGVLELAKVHGLNFGAAVCCVDGLGGGERSFGFFFRSDRAYETAELEQLHAWLLATHRAHARPKNLTEAELETLGLVKNGLLMKEIASALGVSESAVKQRLRNARLKLNAKTGSQAAARATMLGMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW3</accession>
    <name>A0A2M9PEW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_04705</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000204">
        <property type="protein sequence ID" value="PJN96079.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="3">
        <location>
            <begin position="170"/>
            <end position="341"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96079.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="368" mass="40763" checksum="AE70F5C3C6BB039B" modified="2018-04-25" version="1">MTTIKVKGFKIFRDKKRPFKARCYHRKTGLKIDLEKAPLGSAAFFAECAKIAAVYEACQAKEPRPGTLGALPAFYFRQEHYLNLSRRTQADYRKVANFLAPIADTPLHLIDTPLIAGIHDKAAKKIGWRQANMLRTFLSEVFRFAVPAGLIDANYAEAVIPKPRPKGRPRANRPWTIEELLKVLELAPPRLAAAVAVIANTGLDPSDAIALRRDAVEDGVIWADRGKTGEPVAIPVPQRLQAVMDAARQHNAITMLASTLGGPWSYSGLSTAWHRFKKAQAGVVPAELTLKGLRHTMATILREAGAAPRKIADLLGQRTESMALFYSRDAQLAERNRETMDIYQGEIERRTEVVKLSLKSVKPGQISK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ9</accession>
    <name>A0A2M9PEZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Cobalamin adenosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000192">
        <property type="protein sequence ID" value="PJN96113.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005624">
        <property type="entry name" value="PduO/GlcC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038084">
        <property type="entry name" value="PduO/GlcC-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03928">
        <property type="entry name" value="Haem_degrading"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143744">
        <property type="entry name" value="SSF143744"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96113.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="13863" checksum="46F76099F48AE43C" modified="2018-04-25" version="1">MTAAHARPAVTLEAANRILAAVIAGAGTQGLTVSAAVVDPWGVLVAFARMDGSAVPVATFAQDKAYTAATLGKPTREFGEKMTSKPFLAAGLSTRERMLCWPGGLPILLEGAVIGGLGVSGASDEEDEALGALGLAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF74</accession>
    <name>A0A2M9PF74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000167">
        <property type="protein sequence ID" value="PJN96205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7868" checksum="78095B3542386A18" modified="2018-04-25" version="1">MTSTTTNVARSGDLFDKIANAFHGVVAVMANASVGMACSREAERLARLSDADLAKLGLTRDRIIPHAFARYMI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF85</accession>
    <name>A0A2M9PF85_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Transketolase_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03950</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000167">
        <property type="protein sequence ID" value="PJN96203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008661">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.920">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005477">
        <property type="entry name" value="Dxylulose-5-P_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009014">
        <property type="entry name" value="Transketo_C/PFOR_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033248">
        <property type="entry name" value="Transketolase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43322">
        <property type="entry name" value="PTHR43322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02780">
        <property type="entry name" value="Transketolase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52922">
        <property type="entry name" value="SSF52922"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transketolase_C" evidence="3">
        <location>
            <begin position="9"/>
            <end position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02780"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11860" checksum="25DE5561A2CD6FC1" modified="2018-04-25" version="1">MSQAMPADLDARFAKPLDRELILRLAREHEALIAIEEGAVGGFGSQVAQLLAEAGVFDRGLKFRSMTFPDTFIDQDSPARMYAAAAMNADHIEAKALSVLGLAQVSARRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF91</accession>
    <name>A0A2M9PF91_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03920</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000166">
        <property type="protein sequence ID" value="PJN96208.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006797">
        <property type="term" value="P:polyphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016898">
        <property type="entry name" value="Polyphosphate_phosphotransfera"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022300">
        <property type="entry name" value="PPK2-rel_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028756">
        <property type="entry name" value="PPK2_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03709">
        <property type="entry name" value="PPK2_rel_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="4">
        <location>
            <begin position="31"/>
            <end position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96208.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="32702" checksum="B0A8F9ADC66FB449" modified="2018-04-25" version="1">MDYRKKLIVEPGAKLRLKSLDPGWHGKHEDEKDAVEEIARHLARITTQQQLLYGEKKHALLIVLQGIDAAGKDGTCWHVISAMNPQGVNVTGFKQPTPEEQAHDFLWRVHPHAPGLGQVGVFNRSHYEDVLVVRVHKLVPKSVWSKRYDAINAFEALLADSGVTILKFFLLISPEEQLKRFAERLDDPARQWKISESDYTERALWEDYIAAYEAMLAKCSTKHAPWYVIPSNHKWFRNLAVSQIVAATLEDLRMKLPAPSVDLAAIRAAYHAAAGDPAHPGKADRGKAKAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF96</accession>
    <name>A0A2M9PF96_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Serine dehydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03860</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000163">
        <property type="protein sequence ID" value="PJN96220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="23"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="323" mass="34848" checksum="2368B53D5B2894A3" modified="2018-04-25" version="1">MTLIDGTRIPTYDDVLAAHERVRPYIHRTPVLTSSFLNQLTGAELFFKCENLQKAGAFKVRGACNAVFGLTEAQAARGVATHSSGNHALSLSYAAGRRGIPCHVVMPRTAPQAKKDAVIGYGGQITECEPSTSSREAVFAEVEARTGADFVHPYNDPRVIAGQGTCSRELMDQVEGLEAVIAPIGGGGMISGTCLTLSTIAPDVEIFAAEPERADDAYRSFKAGHIIADDAPDTIADGLKVPLKELTWHFVQRHVTDILTASDPEIVDAMKLIWKRMKIVMEPSSAVPLATILKNPDRFRGKRVGVIVTGGNVDLDRLPWMQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI0</accession>
    <name>A0A2M9PFI0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 8">30S ribosomal protein S3</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rpsC</name>
        <name evidence="13" type="ORF">CNY89_03290</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7 8">Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 8 10">Belongs to the universal ribosomal protein uS3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003729">
        <property type="term" value="F:mRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1140.32">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01309_B">
        <property type="entry name" value="Ribosomal_S3_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004044">
        <property type="entry name" value="KH_dom_type_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005704">
        <property type="entry name" value="Ribosomal_S3_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001351">
        <property type="entry name" value="Ribosomal_S3_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036419">
        <property type="entry name" value="Ribosomal_S3_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018280">
        <property type="entry name" value="Ribosomal_S3_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07650">
        <property type="entry name" value="KH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00189">
        <property type="entry name" value="Ribosomal_S3_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54821">
        <property type="entry name" value="SSF54821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01009">
        <property type="entry name" value="rpsC_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50823">
        <property type="entry name" value="KH_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00548">
        <property type="entry name" value="RIBOSOMAL_S3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 8 10" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 8 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="4 8 9" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3 8" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="KH type-2" evidence="12">
        <location>
            <begin position="39"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="214"/>
            <end position="239"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016776"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01309"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU003624"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="27243" checksum="835B27F963BF55E1" modified="2018-04-25" version="1">MGQKINPIGFRVQINRTWDSRWFADGKDYGNLLHEDLAIREFIKKNAVQAGVSRVIIERPHRKCRVTIHAARPGVIIGKKGADIEVLRKKLSQFTKSELHLNIVEVRKPELDAALVAENVAQQLERRVSFRRAMKRAVQNSMRMGALGIRINVAGRLGGAEIARTEWYREGRVPLHTLRADIDYALAEAKTAYGIIGIKVWIFKGEILEHDPQARDRRQAELQEGGGMRPQRSRDRDAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX3</accession>
    <name>A0A2M9PFX3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">General stress protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000093">
        <property type="protein sequence ID" value="PJN96457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038725">
        <property type="entry name" value="YdaG_split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16242">
        <property type="entry name" value="Pyrid_ox_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyrid_ox_like" evidence="1">
        <location>
            <begin position="11"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF16242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9548" checksum="92D43648251B5540" modified="2018-04-25" version="1" fragment="single">MPDTKPDDASAIDMIWELADKLDPCLLVTRDGDWQRVRPVFARARRDEGRIYILTDTSGEKHEQIVRFPQVSLAFADPQANDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA2</accession>
    <name>A0A2M9PGA2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000066">
        <property type="protein sequence ID" value="PJN96561.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045422">
        <property type="entry name" value="DUF6511"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20121">
        <property type="entry name" value="DUF6511"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96561.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7520" checksum="6CE2BA6DF547C271" modified="2018-04-25" version="1">MVDLTEEERAAITATMKRVALLMDEIGWATPLADLTEAQVRALIEEAVEGFREAMSDIARAQTPEVPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC8</accession>
    <name>A0A2M9PGC8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">NADH-quinone oxidoreductase subunit I</fullName>
            <ecNumber evidence="6">7.1.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">NADH dehydrogenase I subunit I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">NDH-1 subunit I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">nuoI</name>
        <name evidence="8" type="ORF">CNY89_01685</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 2 [4Fe-4S] clusters per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">NDH-1 is composed of 14 different subunits. Subunits NuoA, H, J, K, L, M, N constitute the membrane sector of the complex.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Peripheral membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the complex I 23 kDa subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000061">
        <property type="protein sequence ID" value="PJN96582.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050136">
        <property type="term" value="F:NADH dehydrogenase (quinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01351">
        <property type="entry name" value="NDH1_NuoI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010226">
        <property type="entry name" value="NADH_quinone_OxRdtase_chainI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10849">
        <property type="entry name" value="PTHR10849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12838">
        <property type="entry name" value="Fer4_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01971">
        <property type="entry name" value="NuoI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0520">NAD</keyword>
    <keyword evidence="6" id="KW-0874">Quinone</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="6" id="KW-1278">Translocase</keyword>
    <keyword evidence="6" id="KW-0830">Ubiquinone</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="7">
        <location>
            <begin position="54"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="7">
        <location>
            <begin position="94"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="64"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="67"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="74"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="103"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="113"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96582.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18749" checksum="21B6796ABA79E22E" modified="2018-04-25" version="1">MGIPFDRAARYFLLTDFLGGFMLGMKYFFRPKATLNYPHEKGPLSPRFRGEHALRRYANGEERCIACKLCEAICPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETREELLYDKAKLLSNGDRWEPEIARNLELDAPYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX7</accession>
    <name>A0A2M9PGX7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_00450</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000013">
        <property type="protein sequence ID" value="PJN96799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="23"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="96"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="140"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="192"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="273"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="375"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="92"/>
            <end position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="405" mass="44500" checksum="0A2D374CAE1CE5B7" modified="2018-04-25" version="1">MTTLDLQQNEPFRLSMLIYDTRYRSLTIQIVALILTLTFFSWIVHNTVANLAALGKDFNFGFLWQRAGYDISQTLVPYSNDSTHGRAALVGILNTLLVAFLGCVTATVIGVFMGVLRLSPNWLVSRLASVYVEMFRNVPVLIWIMALMAVITDVAPAPAAFRGENATASMLLGDSFAITNRGIYSPWPVWGAGWQVVVGTFLASLVAMRLFTIYARKRQEETGDILPSFWIKLALFFGPVLIVDFLMGGPVSFDYPVLQRFNFQGGGFIDKALIALWFALALYTGAFIAEIVRAGIQAVSKGQSEASAALGLRPGRTMRLVILPQALRVIIPPLISQYLNLTKNSSLAIVVGYADVRATLGGITMNQTGRELESMLLLMAFYLVVSLAISGAMNWFNASVSLKER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ3</accession>
    <name>A0A2M9PGZ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000009">
        <property type="protein sequence ID" value="PJN96817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14707" checksum="0857332E78CC80F9" modified="2018-04-25" version="1" fragment="single">MHGLLARTATITLRILVGLVLLALVVGLVAFFVIRGLVMPRSDEFGTVDDEAKVAKLTLADLPGAADEYFAGMDKALLLRPEPGQPYPAEIREVAAATGLPEEEVRTRAIKGQNMWIVWTGGNDRFWDFAARTAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH01</accession>
    <name>A0A2M9PH01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Methylmalonyl-CoA mutase</fullName>
            <ecNumber evidence="7">5.4.99.2</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00400</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>adenosylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.99.2" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000011">
        <property type="protein sequence ID" value="PJN96811.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004494">
        <property type="term" value="F:methylmalonyl-CoA mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006159">
        <property type="entry name" value="Acid_CoA_mut_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016176">
        <property type="entry name" value="Cbl-dep_enz_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006099">
        <property type="entry name" value="MeMalonylCoA_mutase_a/b_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006098">
        <property type="entry name" value="MMCoA_mutase_a_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01642">
        <property type="entry name" value="MM_CoA_mutase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51703">
        <property type="entry name" value="SSF51703"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00640">
        <property type="entry name" value="acid_CoA_mut_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00641">
        <property type="entry name" value="acid_CoA_mut_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0846">Cobalamin</keyword>
    <keyword evidence="5" id="KW-0170">Cobalt</keyword>
    <keyword evidence="4 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="6">
        <location>
            <begin position="322"/>
            <end position="454"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022628"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023285"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96811.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="456" mass="49002" checksum="0A480CAABC483B72" modified="2018-04-25" version="1" fragment="single">AIASGMDVDDFAGRLSFFFAIGMNFFMEIAKLRAARLLWHRIMSEFNPKKDSSLMLRTHCQTSGVSLQEQDPYNNVVRTAYEAMAAALGGTQSLHTNALDEAIALPTEFSARIARNTQLILQEETGITHVADPLAGSYYVEKLTAELAEAAWKLIEEVDGLGGMTKAVESGMPKLRIEESAARRQAAVDRGTEVIVGVNKYRLAQQDPIDILDIDNAAVRESQIARLKRIRETRDAEVCAAALAELERVAAEGGNLLAAAVEAARARASVGEISDAMEKVFGRHRAEVRTLAGVYGAAYEGDAGFAAIQADVERFAAEEGRRPRMLVVKMGQDGHDRGAKVIATAFADIGFDVDVGPLFQTPEEAAQDAIDNDVHVIGVSSQAAGHKTLAPKLIEALKAQGAGDILVICGGVIPQQDYDFLYKAGVKAIFGPGTNIPEAAKNILDLIRDARPQAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH55</accession>
    <name>A0A2M9PH55_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutamyl-tRNA amidotransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000002">
        <property type="protein sequence ID" value="PJN96867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016884">
        <property type="term" value="F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.410">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023168">
        <property type="entry name" value="GatB_Yqey_C_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019004">
        <property type="entry name" value="YqeY/Aim41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042184">
        <property type="entry name" value="YqeY/Aim41_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28055">
        <property type="entry name" value="PTHR28055"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09424">
        <property type="entry name" value="YqeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="16882" checksum="1CD1E37177C231E9" modified="2018-04-25" version="1">MLRERFSADLKDAIRSKDAPRVSTLRLILAAVKDRDIAARTEDASEGVPDSEIVAILGRMVKQRQESARLYEEGGRIDLAEGERAEIKIIKDYLPRQMSEDELRAAVARVIADTHAATIRDMGKVMAELKTRHAGKMDFARASAVVKDVFCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P1</accession>
    <name>A0A2M9P4P1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004300">
        <property type="protein sequence ID" value="PJN92507.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92507.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="9150" checksum="F5FC7F0A98BA2A35" modified="2018-04-25" version="1" fragment="single">LTRSSLHRCLQRHGVSRLPKVEGDKPARKKFKAYPIGFFHIDIAEVQTAEGKLYLYVGIDRTSKFAFAWLADKATTVTARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R4</accession>
    <name>A0A2M9P4R4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DDE_Tnp_Tn3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_28720</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004164">
        <property type="protein sequence ID" value="PJN92551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="1"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9319" checksum="F4196C31720ACA03" modified="2018-04-25" version="1" fragment="single">VLWNTTYLQAAIERLSAAGRPVSDDHLAHLSPLGWQHINLTGDYLWADDDMPADPPQAPAPTSRPFRANQSLEYICARSMYRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P552</accession>
    <name>A0A2M9P552_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003796">
        <property type="protein sequence ID" value="PJN92676.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92676.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8384" checksum="C31E4064252B464E" modified="2018-04-25" version="1" fragment="single">LVTQAINGEACEMEFAYVLPSGESFTFTVHAVYLPRPRIEISGPQGVQATFDWQAARDSTVGRMCTATLINDIEVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P566</accession>
    <name>A0A2M9P566_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003782">
        <property type="protein sequence ID" value="PJN92682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023614">
        <property type="entry name" value="Porin_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6666" checksum="46DF561AD2CABC1A" modified="2018-04-25" version="1" fragment="single">GAFGVYDGEQTYGLTVAYDLGGGASVNMGVAQSYGRDAYGTPGADNYIAGVEDATIADFGIKMEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H0</accession>
    <name>A0A2M9P5H0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003429">
        <property type="protein sequence ID" value="PJN92801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11392" checksum="71BD2D872224ED1E" modified="2018-04-25" version="1" fragment="single">PATPRTGRLRFRWRTSQLHPWSDAGAPLAVPAPEGIVDRSLFAMTRAEADDVLPIALVTFKVASTFSGSGEGAPCNNIRAQHGPVLLALEAFSEQTRTFTSKNWT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H5</accession>
    <name>A0A2M9P5H5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003498">
        <property type="protein sequence ID" value="PJN92779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9875" checksum="DEB3BC48094640D9" modified="2018-04-25" version="1" fragment="single">EFQLSGYGQYGHFLTLLVIILTFRHSDFLRAAHVLRNTGFLRLFETRQEMPNRAQLGGVREGYRREMILVTMINRHFTSQDCIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M3</accession>
    <name>A0A2M9P5M3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type IV secretion system protein VirD4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003383">
        <property type="protein sequence ID" value="PJN92818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032689">
        <property type="entry name" value="TraG-D_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12696">
        <property type="entry name" value="TraG-D_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TraG-D_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11899" checksum="DEE6DB1A521561C3" modified="2018-04-25" version="1" fragment="single">GAHLMLIVQSLANLREVYGADGAANFLGNCELQLFMAPTDADTPRYVSEAIGDHTRMVQVKSWRQRGWDAASIQERQEGIRLIRPEQIRMLGPGAAIALVRDQNPVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M8</accession>
    <name>A0A2M9P5M8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003371">
        <property type="protein sequence ID" value="PJN92820.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92820.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7885" checksum="83948BE3BA8085A3" modified="2018-04-25" version="1" fragment="single">ILGGTLTLIGTSTNLLIDGVARGAGLEPFGIFEDRFCDRPPLRQQHVDLPQLRDDLLGLVLSLRHSWPPPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P0</accession>
    <name>A0A2M9P5P0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25870</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003246">
        <property type="protein sequence ID" value="PJN92857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="34"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="11009" checksum="F46FF6884E98803A" modified="2018-04-25" version="1" fragment="single">MDPGAAASSVGAVDLAAERAVVKETGMRQNRFWPSRSKIGCGATSTKMSEIPRRSAAAARPRPRRRGGSWTCRSWTPRDLGPGCGRLERRRRRSRRRASG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P9</accession>
    <name>A0A2M9P5P9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25820</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003235">
        <property type="protein sequence ID" value="PJN92862.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014696186" evidence="2">
        <location>
            <begin position="18"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92862.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="7745" checksum="BA564FE2E8FBDED7" modified="2018-04-25" version="1" fragment="single">MLAAAVAATAFSTPLLAQDAEFQLPEQCTTAAAAGGMDHSAMGHGGMQDDQPGGMDSGMMGMMGMGGMDLESIPEHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S4</accession>
    <name>A0A2M9P5S4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003220">
        <property type="protein sequence ID" value="PJN92870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="36"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="11858" checksum="0C689926731F5AEB" modified="2018-04-25" version="1" fragment="single">SLGQDVSGTIEIIGVTTESEELKAVTATVHDLPTRAKKRGAGIGTGGGGGELGNDGDSTAPQQGELSFSVDEFSRAIMAKIVKKCGTRDYWEDWATNIAEIAKNHIARLTGIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D3</accession>
    <name>A0A2M9P6D3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002550">
        <property type="protein sequence ID" value="PJN93121.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005625">
        <property type="entry name" value="PepSY-ass_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34219">
        <property type="entry name" value="PTHR34219"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03929">
        <property type="entry name" value="PepSY_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="102"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93121.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15266" checksum="1E168E484AC30FAB" modified="2018-04-25" version="1" fragment="single">ATLYGLMYPLHFGHFAGILSKVVWGALGVSMAFLGRRAAVGTEPSLGATLYGLMYPLHFGHFAGILSKVVWGALGVSMAFVVLSGFRIWLQRRAQTPVWIRFGRAVEVTAYGLPFAMVASAWGFFLTRPAADPFLWTPLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I9</accession>
    <name>A0A2M9P6I9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002402">
        <property type="protein sequence ID" value="PJN93184.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93184.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3796" checksum="C47CFE4B2707E6A4" modified="2018-04-25" version="1" fragment="single">MPSYAALDVSQETTAICVVDEAGRILAEKKVATCPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S3</accession>
    <name>A0A2M9P6S3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Damage-inducible protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002336">
        <property type="protein sequence ID" value="PJN93219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044260">
        <property type="term" value="P:cellular macromolecule metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043412">
        <property type="term" value="P:macromolecule modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044238">
        <property type="term" value="P:primary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002052">
        <property type="entry name" value="DNA_methylase_N6_adenine_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00092">
        <property type="entry name" value="N6_MTASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16702" checksum="07DE736676FAE6DB" modified="2018-04-25" version="1" fragment="single">AINIEAVYHGTMGGDYVPFEGICLTDTFQMYESDDLISHYMPDNSERRKRQKATDIRVIVGNPPYSSGQNSANDHAANTVYPQLDDRLRDTFVSRSNNPNKEPYTDSYIRAIRWASDRIGDAGVVAYVTNAGWIDGTAADGLRACLAEEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S4</accession>
    <name>A0A2M9P6S4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002292">
        <property type="protein sequence ID" value="PJN93242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010093">
        <property type="entry name" value="SinI_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01764">
        <property type="entry name" value="excise"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="9"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10680" checksum="CD69BB8A36415409" modified="2018-04-25" version="1" fragment="single">MMASPEENWLSLEETATYIGVGKTVLYGMAREGTIPARKVGKKWTFEKAGLDAWMRGHRPVQSFFTDIEFKIEGNDELRDPQREGYLRTYEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V7</accession>
    <name>A0A2M9P6V7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002197">
        <property type="protein sequence ID" value="PJN93281.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051536">
        <property type="term" value="F:iron-sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016226">
        <property type="term" value="P:iron-sulfur cluster assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044304">
        <property type="entry name" value="NUBPL-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033756">
        <property type="entry name" value="YlxH/NBP35"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42961">
        <property type="entry name" value="PTHR42961"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10609">
        <property type="entry name" value="ParA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93281.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15639" checksum="5B7607AEAA075153" modified="2018-04-25" version="1" fragment="single">KMFSALAAEGVNIRVITTSEIKVSVLVDRKYMAANLAVALAQEGKATGLLDADIYGPSIPRMMGVSARPSSPDGKTIHPLHAHGVTLMSIGLMVKPDEALVWRGPMLMGALQQLMGQVVWGDLDGPSRVSRMIRTRSIKLNVSICS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W6</accession>
    <name>A0A2M9P6W6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22060</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002191">
        <property type="protein sequence ID" value="PJN93282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="15"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="58"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15845" checksum="7BD9AA30D43B0C00" modified="2018-04-25" version="1" fragment="single">MLAGCFGGTPRHRTSAPLPKSSTERLSATSSCLRPPPALKLSGSDARNERHQQKPELDSFDSPSTPVKTSLLTEKSGSLPHPPHSEAPPPELGQLTDLCQEALSFFPEATASWRDLSCTADKIAPMIGIPRVLMLKARAAMGWCEAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y6</accession>
    <name>A0A2M9P6Y6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_21695</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002098">
        <property type="protein sequence ID" value="PJN93326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18321" checksum="FA34AB4441158BFF" modified="2018-04-25" version="1" fragment="single">SGCGKSTLLRLIAGLEPISDGDLAFDGTRMNDLAPSRRGIAMVFQSYALYPHMKIYDNMAFGMTLAKSDPGEIRRRVQKAAEMLQIDHLLDRLPKQLSGGQRQRVAIGRAIVRDPRVFLFDEPLSNLDAALRVQTRLEIAKLHHEMDNVTMIYVTHDQVEAMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P713</accession>
    <name>A0A2M9P713_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002125">
        <property type="protein sequence ID" value="PJN93309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005183">
        <property type="entry name" value="DUF305"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03713">
        <property type="entry name" value="DUF305"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="DUF305" evidence="2">
        <location>
            <begin position="40"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17607" checksum="87D22403F5736EC5" modified="2018-04-25" version="1" fragment="single">YMLGMYSNKGLNIAIFVGAIIVFALSLWLVRSQVTVSGPSYMRAMIPHHSIAIMTSERAQIRDPRVRHLADEIIEAQRREIAEMRYLIAEVSAGNVVESIYQDPPAEPGSVEDALSNTLISGLDLAPMPEAEADRVLGAPAPCTFNRSPESDPILWASEGGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A5</accession>
    <name>A0A2M9P7A5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">5-carboxymethyl-2-hydroxymuconate isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20730</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001886">
        <property type="protein sequence ID" value="PJN93446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011234">
        <property type="entry name" value="Fumarylacetoacetase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01557">
        <property type="entry name" value="FAA_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0413">Isomerase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAA_hydrolase" evidence="1">
        <location>
            <begin position="26"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13112" checksum="015D46405CFFE858" modified="2018-04-25" version="1" fragment="single">MELCFAAAPQVLLPIDGSDLRFPVRRVYCVGRNYAEHAREMGHDPEREPPFFFQKNPDNLDISGQFPYPSATQDLHHEVELAVLLGGGGAEIDPRDAQALVFGYAVALDMTRRDLQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H1</accession>
    <name>A0A2M9P7H1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_20615</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001861">
        <property type="protein sequence ID" value="PJN93465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="20521" checksum="3E9A78683BB5D50C" modified="2018-04-25" version="1" fragment="single">RPLEGAWPYLWLDATYIKVRESGRIISRAVIVAVAVNEDGKREVLGVATGPSEAETFWTEFLRSLADRGLRGVKLVIADDHKGLRAAARRVFDATHQRCRVHWLRNALAHAPAKQRAAVAAMLKTIFAQETRTEAIDQWGIVADALREKQPKLGALMDASREDVLAYMDFPREHWPQIASTNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J7</accession>
    <name>A0A2M9P7J7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19385</name>
        <name evidence="3" type="ORF">CNY89_20390</name>
        <name evidence="2" type="ORF">CNY89_23030</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002430">
        <property type="protein sequence ID" value="PJN93172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001818">
        <property type="protein sequence ID" value="PJN93495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001612">
        <property type="protein sequence ID" value="PJN93642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7772" checksum="7A6835430E9763F0" modified="2018-04-25" version="1">MTRRKFSRAFKIEIVRLVTDRGVAVAQAARDLDAAESVLRRWMRELTATPTTAFPGNGQMGATWPRLQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L0</accession>
    <name>A0A2M9P7L0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ATP-dependent Clp protease adapter protein ClpS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">clpS</name>
        <name evidence="3" type="ORF">CNY89_20160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Binds to the N-terminal domain of the chaperone ClpA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the ClpS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001773">
        <property type="protein sequence ID" value="PJN93527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1390.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00302">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022935">
        <property type="entry name" value="ClpS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003769">
        <property type="entry name" value="ClpS_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014719">
        <property type="entry name" value="Ribosomal_L7/12_C/ClpS-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33473">
        <property type="entry name" value="PTHR33473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02617">
        <property type="entry name" value="ClpS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54736">
        <property type="entry name" value="SSF54736"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ClpS" evidence="2">
        <location>
            <begin position="25"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="12366" checksum="FD9EC7BEA03E232C" modified="2018-04-25" version="1">MRMSNPRPPGEDAGLLTKTRIRTQRPPLYKVMLLNDDYTPMEFVVHVLERFFGTTNAQAVEIMLTVHRKGLAVVGVFSFEIAETKVTQVMDYARRNQHPLQCTMERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R2</accession>
    <name>A0A2M9P7R2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein RecA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_19930</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RecA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001725">
        <property type="protein sequence ID" value="PJN93559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013765">
        <property type="entry name" value="DNA_recomb/repair_RecA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020588">
        <property type="entry name" value="RecA_ATP-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR45900">
        <property type="entry name" value="PTHR45900"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00154">
        <property type="entry name" value="RecA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50162">
        <property type="entry name" value="RECA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RECA_2" evidence="5">
        <location>
            <begin position="46"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009391"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00015553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13560" checksum="310D54464FB874C4" modified="2018-04-25" version="1" fragment="single">MNAPVVDFSERRGMDKQKALESALAQIERSFGKGSIMRLGSTPALDIEAISTGSIGLDIALGIGGLPKGRIIEIYGPESSGKTTLALHVIAEEQAKGGICAFVDAEHALDPTYARKLGVNIDDLLIAQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P850</accession>
    <name>A0A2M9P850_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4-carboxymuconolactone decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001548">
        <property type="protein sequence ID" value="PJN93698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="39"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11308" checksum="1DE75E8E6AE55057" modified="2018-04-25" version="1">MSDAISERHAQGMATRRSVLGDAHVDRAEAAKTDFDAPFQELITEAAWGHVWSRPDWSKRDRSIVTIALLAALGQDEEVAMHVRATANTGATPEVLFRSYDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P891</accession>
    <name>A0A2M9P891_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18565</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001479">
        <property type="protein sequence ID" value="PJN93762.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="244"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93762.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="26554" checksum="B761DF09E096526D" modified="2018-04-25" version="1" fragment="single">AGFAAGIIDVDLAAGSVRTPLMRGHIAETWKEYRDTLIDQTVDGQTVLRNSARPSMFFNLDDLGFGAGFARFIPGLFVTAGLFLTFLGLISALTSMDLSGGNSTAALNDLLQIASAKFIMSLTGLLCSIVFTIVLRVEMGRLERRLHQLCHDLERRLSFVSLESLAIDQLKAAQEQREHLRALAFEMVAELGRPLREELPAAISNSITTAMSPLLDQVSRMGTDGMGSMVEDLSRQFSGDVSRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B4</accession>
    <name>A0A2M9P8B4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001483">
        <property type="protein sequence ID" value="PJN93758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11605" checksum="17752B7E0A5939FF" modified="2018-04-25" version="1" fragment="single">AQFFEHGGRTIGEGGDVEGFTDADFIEWRGHGCSLQNPWRASWIFTFRSIFPSFSKMRPDKFCAWRVILSLWGSRPILEAWWAGKAVRPLQVDDKSARSKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I3</accession>
    <name>A0A2M9P8I3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">CbbX protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17980</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001396">
        <property type="protein sequence ID" value="PJN93855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000470">
        <property type="entry name" value="CbxX/CfqX_mono"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000641">
        <property type="entry name" value="CbxX/CfxQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00819">
        <property type="entry name" value="CBXCFQXSUPER"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00820">
        <property type="entry name" value="CBXXCFQX"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase_AAA_core" evidence="3">
        <location>
            <begin position="72"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="18359" checksum="62D7529E652EEC06" modified="2018-04-25" version="1" fragment="single">MQDVSEIVPATVDLRAEYESSGVREVLDELDRELIGLKPVKDRIRETAALLLVDRARRQMGLSNETPTLHMSFTGNPGTGKTTVAMKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTKDVLKKAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I8</accession>
    <name>A0A2M9P8I8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001408">
        <property type="protein sequence ID" value="PJN93844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12802">
        <property type="entry name" value="MarR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="22"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12802"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8440" checksum="7C4EA271E0804093" modified="2018-04-25" version="1" fragment="single">MKKVRVTADRLDDAARAGWLYYIAGRTQDEIAAEMGVSRQVAQRLVSLAVDARLVRVWMDHPIASCLELAARLRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U7</accession>
    <name>A0A2M9P8U7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Benzoate 1,2-dioxygenase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001308">
        <property type="protein sequence ID" value="PJN93957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051213">
        <property type="term" value="F:dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006725">
        <property type="term" value="P:cellular aromatic compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00667">
        <property type="entry name" value="ring_hydroxylating_dioxygenases_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000391">
        <property type="entry name" value="Rng_hydr_dOase-bsu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41534">
        <property type="entry name" value="PTHR41534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00866">
        <property type="entry name" value="Ring_hydroxyl_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009570"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="17046" checksum="AC5DB905812B1BFB" modified="2018-04-25" version="1" fragment="single">MNREHNLTGARVEYDAVCAFLYREARLLDDREWDEWLTCYMPDASYWMPAWDDDDQTTEDPQSQISLIYYPNREGLEDRVFRIKTERSGASTPEPRTSHTVSNVEVTADRGSEVDVRYNFHTLNHRYKSTDQFFGTMFVTLRQT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y3</accession>
    <name>A0A2M9P8Y3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001283">
        <property type="protein sequence ID" value="PJN93994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="26904" checksum="9810B5B8BE5A0CBF" modified="2018-04-25" version="1" fragment="single">MRDGQKAALNLANWHHFMDALKLAGYRSEKMISSGTTIIFSYVLYLIGLRDYGVDRVTMRQTIAEFFFMATLTGRYTNSPETRFESDLSLIRDLPDGTAFLARLRALCTTTLTGDFWTITLPSQLATSASRSPSLFAYQAALIKLDANALYSPLKISAMVDPAVKGTKAALEQHHLFPRGYLEETGINDLKQINQIANFAAVEWPANIKIGKKPPADYVPPLDHAMSADERDRLYGWHALP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H1</accession>
    <name>A0A2M9P9H1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001154">
        <property type="protein sequence ID" value="PJN94171.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94171.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="169" mass="17998" checksum="07919786907A2A44" modified="2018-04-25" version="1" fragment="single">GLAASSLFPALMMGIFSKRVNKEGAIAGMLVGESVEGRGAQATGGVEFGEYPTVRTPEGNGIGAGAQPQASTRILGQGIVGISGDEQDQRRAAVLGKGPGIEIGEDDLRIHGRRRLGRRRSCGAERRSRQKQPSCAAHRLFPSKRRPRRTRTTSADYIGSMRIGATRLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9P6</accession>
    <name>A0A2M9P9P6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molybdopterin converting factor subunit 1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">moaD</name>
        <name evidence="1" type="ORF">CNY89_15535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001085">
        <property type="protein sequence ID" value="PJN94263.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016155">
        <property type="entry name" value="Mopterin_synth/thiamin_S_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003749">
        <property type="entry name" value="ThiS/MoaD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02597">
        <property type="entry name" value="ThiS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54285">
        <property type="entry name" value="SSF54285"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94263.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8788" checksum="43EC6EA17A97CC86" modified="2018-04-25" version="1">MTVLYFAWLRERVGLPSEAVETEAATVAELVEELRGREERYAAAFADMAAVRVAVDQDLSDLSAPLAGVREVAFFPPMTGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q6</accession>
    <name>A0A2M9P9Q6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase</fullName>
            <ecNumber evidence="3">2.7.6.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_15550</name>
        <name evidence="14" type="ORF">CNY89_15775</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 7,8-dihydroneopterin triphosphate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPPK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.3" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001114">
        <property type="protein sequence ID" value="PJN94226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001086">
        <property type="protein sequence ID" value="PJN94260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003848">
        <property type="term" value="F:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046656">
        <property type="term" value="P:folic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000550">
        <property type="entry name" value="Hppk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035907">
        <property type="entry name" value="Hppk_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01288">
        <property type="entry name" value="HPPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55083">
        <property type="entry name" value="SSF55083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0289">Folate biosynthesis</keyword>
    <keyword evidence="7 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HPPK" evidence="13">
        <location>
            <begin position="4"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="15">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00033413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF01288"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN94260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9272" checksum="32044923DCFAB5EA" modified="2018-04-25" version="1" fragment="single">MKLIAFGANLPIEGCSPLATLENALKRLEMRGVRIVARSRWWGSPAFPAGSGPDFVNGAAALATDLEPEDLLATLHAVEAELGRERS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U4</accession>
    <name>A0A2M9P9U4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15325</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001061">
        <property type="protein sequence ID" value="PJN94300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6874" checksum="2F42CF26D2520D03" modified="2018-04-25" version="1">MTARRSPSLPTPKQIRDVHDAVSALHPGARIIKIGPEGLTFEYPDTTKPGAMAWEGRAFSDRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V4</accession>
    <name>A0A2M9P9V4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001052">
        <property type="protein sequence ID" value="PJN94315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="393"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="393" mass="43109" checksum="2AC1ADBCCA238C0E" modified="2018-04-25" version="1" fragment="single">RPFPPAGEGLPPGRGRDYSPAARAADLDYGLNDRILFDRPTFGNSSTAITAGPWWRSLPRQALTEDDGTGPMRLWQTAAANQVYVYPAHKDYGAEAGDLFPANTPYLIVSRGSSGSDQPFLEAVAMILASLRPDTKAKAAEAGMINSTVQMVFRRSLQNVRSRESYFSSDAHPAAFEAFNVNLARMVSLANSLKASELPAEARIRVVEEDLGTEGVDFFGEGLSERLFDTPQAVARVWRSSTGRRSMVLSAEDSRDANDRPLTFQWRLLQGDPAKVKIEPLEGGRQARVTLDWHEPFAISEENAQKTSRVDIGLFAVNGVHDSAPAILSWAFPTHETRVYAAGEGGAPRIVSIDHADPAKAGVYADPLLYPRADWRDVYRYDASGRPLGWTRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V8</accession>
    <name>A0A2M9P9V8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15230</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001050">
        <property type="protein sequence ID" value="PJN94320.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94320.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="4986" checksum="8D204027A74B6718" modified="2018-04-25" version="1" fragment="single">MKAQGLLAPHRSAPRAAHPHDGTIVTERVDETWGSDMTETITTIEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA86</accession>
    <name>A0A2M9PA86_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aminoacyl-tRNA hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14530</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prokaryotic/mitochondrial release factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000980">
        <property type="protein sequence ID" value="PJN94434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003747">
        <property type="term" value="F:translation release factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000352">
        <property type="entry name" value="Pep_chain_release_fac_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045853">
        <property type="entry name" value="Pep_chain_release_fac_I_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00472">
        <property type="entry name" value="RF-1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75620">
        <property type="entry name" value="SSF75620"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00745">
        <property type="entry name" value="RF_PROK_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RF_PROK_I" evidence="2">
        <location>
            <begin position="21"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010835"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS00745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7089" checksum="4F8C6C28059ADD69" modified="2018-04-25" version="1" fragment="single">MLRINDQVSLADWELTETFTRASGPGGQNVNKVSTAVELRFEAARSPHLDPGAKARLRRLAGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC6</accession>
    <name>A0A2M9PAC6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14260</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000950">
        <property type="protein sequence ID" value="PJN94482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010266">
        <property type="entry name" value="NnrS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05940">
        <property type="entry name" value="NnrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="28"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6081" checksum="63BBA335DF5C896F" modified="2018-04-25" version="1" fragment="single">SYLCLFAAALVRPAADLAGEPRLLELAGGLWIAAFLLFLAEYGPMLLFDRKRRIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF6</accession>
    <name>A0A2M9PAF6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC_trans_aux domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000931">
        <property type="protein sequence ID" value="PJN94517.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005586">
        <property type="entry name" value="ABC_trans_aux"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03886">
        <property type="entry name" value="ABC_trans_aux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC_trans_aux" evidence="1">
        <location>
            <begin position="3"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94517.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7003" checksum="4D3ACBBB7759F25A" modified="2018-04-25" version="1">MIGAPEGPFQFSGQYVLVSPASGRIVSTDRFAITTQAGPGPQGLVAAHARAVEALADQIAARVTGRPIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI0</accession>
    <name>A0A2M9PAI0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 3">Methionine aminopeptidase</fullName>
            <shortName evidence="2">MAP</shortName>
            <shortName evidence="2">MetAP</shortName>
            <ecNumber evidence="2 3">3.4.11.18</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">Peptidase M</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2 5" type="primary">map</name>
        <name evidence="5" type="ORF">CNY89_13945</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 2">Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 3">
            <text>Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.</text>
            <dbReference type="EC" id="3.4.11.18"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <cofactor evidence="2 3">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
        <text evidence="2 3">Binds 2 divalent metal cations per subunit. Has a high-affinity and a low affinity metal-binding site. The true nature of the physiological cofactor is under debate. The enzyme is active with cobalt, zinc, manganese or divalent iron ions. Most likely, methionine aminopeptidases function as mononuclear Fe(2+)-metalloproteases under physiological conditions, and the catalytically relevant metal-binding site has been assigned to the histidine-containing high-affinity site.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Monomer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.11.18" evidence="2 3"/>
    <dbReference type="EMBL" id="PHNO01000922">
        <property type="protein sequence ID" value="PJN94534.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070006">
        <property type="term" value="F:metalloaminopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046914">
        <property type="term" value="F:transition metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070084">
        <property type="term" value="P:protein initiator methionine removal"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01086">
        <property type="entry name" value="MetAP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01974">
        <property type="entry name" value="MetAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036005">
        <property type="entry name" value="Creatinase/aminopeptidase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000994">
        <property type="entry name" value="Pept_M24"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001714">
        <property type="entry name" value="Pept_M24_MAP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002467">
        <property type="entry name" value="Pept_M24A_MAP1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00557">
        <property type="entry name" value="Peptidase_M24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00599">
        <property type="entry name" value="MAPEPTIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55920">
        <property type="entry name" value="SSF55920"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00500">
        <property type="entry name" value="met_pdase_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00680">
        <property type="entry name" value="MAP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 5" id="KW-0031">Aminopeptidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 3" id="KW-0645">Protease</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M24" evidence="4">
        <location>
            <begin position="23"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="89"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="114"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="125"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="188"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
            <label>2</label>
            <note>catalytic</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="252"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00557"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94534.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="281" mass="30607" checksum="8413347CF136EC6E" modified="2018-04-25" version="1">MEGQPPSRLNRDGIRIHDPADFEGMRAAGRLVADILDRIAPAVQPGVTTLELDAQIHDMVRAAGAVSATVGYKGYKHASCISINYVVCHGIPNDVRTPGAPNPRLKAGDILNIDVTVILDGWYGDSSRMYVAGAPDRKAERLIDITHRALMEGIEQVRPGNTFGDIGAAIQRYAEGQRCSVVRDFCGHGLGRVFHAAPNVLHFGRWGTGPVLEPGMFFTIEPMINLGRPETKVLEDDWTAVTKDRSLSAQFEHSVGVTEAGCEIFTLSPAGRFHPTWDRKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL2</accession>
    <name>A0A2M9PAL2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Propionyl-CoA carboxylase</fullName>
            <ecNumber evidence="3">6.4.1.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_13780</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + hydrogencarbonate + propanoyl-CoA = (S)-methylmalonyl-CoA + ADP + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:23720"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57327"/>
            <dbReference type="ChEBI" id="CHEBI:57392"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.4.1.3"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:23721"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Metabolic intermediate metabolism; propanoyl-CoA degradation; succinyl-CoA from propanoyl-CoA: step 1/3.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.4.1.3" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000907">
        <property type="protein sequence ID" value="PJN94562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00945">
        <property type="reaction ID" value="UER00908"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004658">
        <property type="term" value="F:propionyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016042">
        <property type="term" value="P:lipid catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001882">
        <property type="entry name" value="Biotin_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041265">
        <property type="entry name" value="PCC_BT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18140">
        <property type="entry name" value="PCC_BT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00188">
        <property type="entry name" value="BIOTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0092">Biotin</keyword>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0442">Lipid degradation</keyword>
    <keyword evidence="8" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="7" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="13">
        <location>
            <begin position="1"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="12">
        <location>
            <begin position="12"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="Lipoyl-binding" evidence="11">
        <location>
            <begin position="343"/>
            <end position="422"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000634"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="422" mass="46007" checksum="683FC4EFCBB4B1EB" modified="2018-04-25" version="1" fragment="single">FLDAATRKAMGEQAVALAKAVDYCSAGTVEFIVDGDRNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGEKLSLTQDDVKLNGWAIESRLYAEDPYRNFLPSIGRLTRYRPPAAYHAAKGAVRNDTGVFEGGEISMFYDPMIAKLCAWAPTRADAIQTMHRALDSFELEGIGHNLPFLSAVMEHPRFQSGEITTAFIAEEYPDGFLGAPQSEETLVDLAALAIALKVLHEERAAKISGTLSNHQRKIGADWVARVQGASRTGRVSVTPGRYVIDWAEGGQSEVLLAVNEGFGPLVRSVVDGGERIVKVAATAKGFRMRYRGADLAVAVLTPRQAELAALMPEKAPPDTSKFLLCPMPGLVVRIDVAEGDEVQDGQALCMVEAMKMENVLRAERKGVIAKIRAKEGDSLGVDEIILEFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL6</accession>
    <name>A0A2M9PAL6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Type-4 uracil-DNA glycosylase</fullName>
            <ecNumber evidence="3">3.2.2.27</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_13640</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Hydrolyzes single-stranded DNA or mismatched double-stranded DNA and polynucleotides, releasing free uracil.</text>
            <dbReference type="EC" id="3.2.2.27"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the uracil-DNA glycosylase (UDG) superfamily. Type 4 (UDGa) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.2.2.27" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000889">
        <property type="protein sequence ID" value="PJN94587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004844">
        <property type="term" value="F:uracil DNA N-glycosylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005273">
        <property type="entry name" value="Ura-DNA_glyco_family4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005122">
        <property type="entry name" value="Uracil-DNA_glycosylase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036895">
        <property type="entry name" value="Uracil-DNA_glycosylase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03167">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00986">
        <property type="entry name" value="UDG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52141">
        <property type="entry name" value="SSF52141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00758">
        <property type="entry name" value="UDG_fam4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0408">Iron</keyword>
    <keyword evidence="8" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="UDG" evidence="9">
        <location>
            <begin position="66"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001400"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006521"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019403"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24154" checksum="602F80282100DDAE" modified="2018-04-25" version="1" fragment="single">RSGLRDAGGAAGGGGGVRGLCAEEGGAIHGLCAAIAAACGTLEALRAAVAEFEGCALKKGARSTVFADGNPLARLMVIGEAPGREEDQAGLPFVGRSGRLLDLMLAAIGLSRKAAEVKDSVYISNVLPWRPPGNREPSSDEVAMMAPFLFRHVELKAPEAILLLGSPATRTVLGTSQGIARMRGKWAEWRGIPVMPTWHPAALLRDPAKKREAWADLLMLSARLEGEGRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN7</accession>
    <name>A0A2M9PAN7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cytochrome C oxidase Cbb3</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13520</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000880">
        <property type="protein sequence ID" value="PJN94603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032858">
        <property type="entry name" value="CcoP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038414">
        <property type="entry name" value="CcoP_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14715">
        <property type="entry name" value="FixP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="domain" description="FixP_N" evidence="4">
        <location>
            <begin position="13"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF14715"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9527" checksum="FED86264A243A814" modified="2018-04-25" version="1" fragment="single">MAADRDFDEATQTETTGHEWDGIKELDTPMPRWWLWTFYATIVWGIGFVILYPAWPMVHGATPGLLGYSSRGVVAAEVAALREAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU3</accession>
    <name>A0A2M9PAU3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_13190</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000843">
        <property type="protein sequence ID" value="PJN94660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03301">
        <property type="entry name" value="ABC_MalK_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015855">
        <property type="entry name" value="ABC_transpr_MalK-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3 5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="6">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="36"/>
            <end position="43"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="357" mass="38783" checksum="3BA60DD2C2EC8764" modified="2018-04-25" version="1">MADVKLTNLKKSFGQVDIIKGIDLDIKHGEFVVFVGPSGCGKSTLLRMIAGLEEITGGELQIDGKRVNEAQPQERGIAMVFQSYAIFPHMTVRENIAFGLTISGTPRAEKDRAVNEAARILQMEHLLDRKPSQLSGGQRQRVAIGRSIVRKPKVFLFDEPLSNLDAALRVDMRMEIGKLHKDLGATMIYVTHDQVEAMTLADKIVVLRAGEVMQVGTPLDLYHNPANQFVAGFLGSPKMNFLDVEVREAVNGRVVVASPALEPVSIPHAVGSFAPGHRAVLGVRPQFLHPGAAADRGHLHGRVSLVERLGTETVLNMELTAGGRIVVSLDGDRPFDLGAEMLVGFEPERAHLFTAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB11</accession>
    <name>A0A2M9PB11_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Damage-inducible protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000806">
        <property type="protein sequence ID" value="PJN94727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15054" checksum="8A36837FD127EA34" modified="2018-04-25" version="1" fragment="single">MPDAVPDLVLAELRSRIARLEQGRAQDRAALPFGIKSIDAVLPSGGLVFGALHEVAGGGDGAVDGAAAALFAAGVASRTKGKVLWCVTRQDLFAPALSQAGLAPARVIYVEAGDEKSMLSCFEEGLRHGGLGAVVAEVARLSMTASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB78</accession>
    <name>A0A2M9PB78_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sulfate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12390</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000771">
        <property type="protein sequence ID" value="PJN94790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030287">
        <property type="entry name" value="FbpC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24220:SF675">
        <property type="entry name" value="PTHR24220:SF675"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="18"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7750" checksum="3198F6E93BAF2851" modified="2018-04-25" version="1" fragment="single">MTMTLSRLTRRFGETEVLRGIDLEIAPGELIALLGPSGSGKTTLLKIIAGLDWPDGGALTMAGADWLALRPQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB91</accession>
    <name>A0A2M9PB91_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">50S ribosomal protein L13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rplM</name>
        <name evidence="5" type="ORF">CNY89_12350</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the universal ribosomal protein uL13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000766">
        <property type="protein sequence ID" value="PJN94798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00392">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01366">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005822">
        <property type="entry name" value="Ribosomal_L13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005823">
        <property type="entry name" value="Ribosomal_L13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036899">
        <property type="entry name" value="Ribosomal_L13_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11545">
        <property type="entry name" value="PTHR11545"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00572">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002181">
        <property type="entry name" value="Ribosomal_L13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52161">
        <property type="entry name" value="SSF52161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01066">
        <property type="entry name" value="rplM_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 4 5" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01366"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="17017" checksum="AC5D27B82B2F55EA" modified="2018-04-25" version="1">MKTFSARPADIDKKWIVIDAEGVVLGRLASVVAMRLRGKHKPTFTPHMDMGDNIIVINAEKVQLTGNKRADKRYYWHTGFPGGIKHRTAGQILEGRHPERVIEKAVERMLPGGPLSRKQLGNLRIYAGGAHPHEAQSPEALDVAALNPKNTRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH1</accession>
    <name>A0A2M9PBH1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AAA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11870</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000720">
        <property type="protein sequence ID" value="PJN94875.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019476">
        <property type="entry name" value="T4SS_TraD_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10412">
        <property type="entry name" value="TrwB_AAD_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="2">
        <location>
            <begin position="94"/>
            <end position="361"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="422"/>
            <end position="441"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="505"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94875.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="505" mass="55047" checksum="642DBF3A74B7F1DB" modified="2018-04-25" version="1" fragment="single">MRASGQRAGCVLVREDIGARSTWFAQHPGNQGYRARAAMISSRNFAHFTALHAAPRGLGAHETPWGATVTILPTVSASAYRFNFHLRGKAGERSVGHTLVLGQTGSGKTLGTAFLIAQARRTGCRVIVFDKDRGLEMPLRAMGGAYGTVRLGEATGFNPFAAETDERGRAWLADWLTALLSRDGPLTAIQAQALAQAVAANAETDPALRRLSAFRRQFRSVDDDGALFDRMGAWDAEGGFGWLFSGTGLDDLSFEAPVTGFDLTEIFEADAVRTAWLAYVFRRIERTVEDGRPTLIVLDEAWKLLDDPYFERRLKDWMLTMRKKNVAVVLLTQRVAHIRESQAGGAILESAATTILYPNSRNTPQELAPLALTDRELDFACLSALEARLALIRSGGVSAIVDMDLRPLGGLTRVLGGARAATGPLRAGATPPTSGRRSPDARFETMGVDRARRIHARRLRRRLHRQDQPLRLRLDAGQRRRGGADMRARLCKVGATAALGVALLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI3</accession>
    <name>A0A2M9PBI3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000714">
        <property type="protein sequence ID" value="PJN94882.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bact_transglu_N" evidence="2">
        <location>
            <begin position="4"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="129"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94882.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="210" mass="23392" checksum="0B894CE8B224E935" modified="2018-04-25" version="1" fragment="single">MTNLRIHHRTTYRYRQPVDFGPHRLMVRPRESRELRLTGFEVRVTPAARVTWALDVWGNAVATAVFSSMHDRMVVECVSEIELDTADWPVFEIAASAMVYPFLYSPDEWTDLGALTVPQHPDPQGRLAAWARGIVRGATTDTLALLKDLCAAIPDAILYQDREAEGTQTPLETLDRGWGSCRDFAVLFAEAARGLGFGARIVSGYLKDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI6</accession>
    <name>A0A2M9PBI6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11650</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000703">
        <property type="protein sequence ID" value="PJN94906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="108"/>
            <end position="128"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13969" checksum="4D7A288A4DC493C6" modified="2018-04-25" version="1">MTRTRSPVAVDDFLGFAFAFLITSLTFFVPCTELGLRVGMTTGSLFAAVINLNRLHDAAGFRPEFALVDRLAFLIFGALVGSLVIAIFTNRIAKRGDEAWANRLDTRLGAAMMVTVLGLILLSVQVAMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS4</accession>
    <name>A0A2M9PBS4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Penicillin-binding protein 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">mrdA</name>
        <name evidence="4" type="ORF">CNY89_11095</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000656">
        <property type="protein sequence ID" value="PJN94997.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009002">
        <property type="term" value="F:serine-type D-Ala-D-Ala carboxypeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005311">
        <property type="entry name" value="PBP_dimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036138">
        <property type="entry name" value="PBP_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017790">
        <property type="entry name" value="Penicillin-binding_protein_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03717">
        <property type="entry name" value="PBP_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56519">
        <property type="entry name" value="SSF56519"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03423">
        <property type="entry name" value="pbp2_mrdA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PBP_dimer" evidence="3">
        <location>
            <begin position="42"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="Transpeptidase" evidence="2">
        <location>
            <begin position="249"/>
            <end position="461"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="466"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94997.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="466" mass="50126" checksum="B3D530EA4CDC1573" modified="2018-04-25" version="1" fragment="single">MLLGLQAGVIGGLAWRMRDLQIVQNEKFSLLAEENRVNLRLIPPARGLIFDRAGLPLAGNRQNYRIVIVREQAGEVAPVLDRLAGIVPLPPDRRQRAEREIASRSAFVPVVVTEHVTWDDVVRVSANAPVLPGVYAEVGLSRFYPDAYSTAHVVGYVGPVSESDLARIENPDPVLQIPRFQIGKTGVEQRLETDLRGQAGDMRIEVSAAGRVVRELGRVEGQAGADITLTIDKGLQNFAMQRMAGESASAVVVDVANGDIVALASSPGFDPNSFVFGISSAEWKGLMDDPYRPLANKAVSGANPPGSTFKMVVALAALEAGVIRPGDTVSCGGYTQLGSRRFHCWKRGGHGRVDLRRSLSQSCDVYYYELARRVGPDGISAMARRLGLGVRHDLPIPAVTEGLMPDRAWKPANRDSAWTTGDSFNYGIGQGFTLASPMQLAVMVARIASGTDVAPRLVKAVGGVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT8</accession>
    <name>A0A2M9PBT8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glutathione S-transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000652">
        <property type="protein sequence ID" value="PJN95006.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006749">
        <property type="term" value="P:glutathione metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010987">
        <property type="entry name" value="Glutathione-S-Trfase_C-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040079">
        <property type="entry name" value="Glutathione_S-Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004045">
        <property type="entry name" value="Glutathione_S-Trfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02798">
        <property type="entry name" value="GST_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00019">
        <property type="entry name" value="Glutathione_Transferase_(cytos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50405">
        <property type="entry name" value="GST_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50404">
        <property type="entry name" value="GST_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GST N-terminal" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="domain" description="GST C-terminal" evidence="2">
        <location>
            <begin position="82"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="181"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50405"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95006.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="181" mass="19522" checksum="DF729E57841CEC2A" modified="2018-04-25" version="1" fragment="single">MTTLYFRPGTCALAPHVALEWIGAPYVAKPIAAASPELLALNPAGAVPVLQEDDGWILTQAGAILHYLARKHPEAGLAGGTGLRAEAESDRWSSFLTGDLHPAFYPVFMPYRYTADPSEEAKSKVVAAGIALVKKKLDLIEAHLSGREWFLEGRSIVDAYAFPMLRWARAKVPGGLAAWPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW4</accession>
    <name>A0A2M9PBW4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">GlsB/YeaQ/YmgE family stress response membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_11125</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0410 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000659">
        <property type="protein sequence ID" value="PJN94992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007341">
        <property type="entry name" value="Transgly_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33884">
        <property type="entry name" value="PTHR33884"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04226">
        <property type="entry name" value="Transgly_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="30"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8584" checksum="A23F45FA1D39D224" modified="2018-04-25" version="1">MGFIWTIIIGFVAGIIAKFIFPGRNEPSGFILTTILGIVGAFVATFLGQALGWYGPNQGAGLIGAVVGACVVLGIWGMLSKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC05</accession>
    <name>A0A2M9PC05_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aldo/keto reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000626">
        <property type="protein sequence ID" value="PJN95059.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="1">
        <location>
            <begin position="15"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95059.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="341" mass="36667" checksum="80A02A952759F2D7" modified="2018-04-25" version="1">MRYRTLGPSGLLVSELCLGTMTFGGSDGIWGQIGQLGQDEADRLVRTALDAGINFIDTANVYAGGESERILGQAIRNLGVNRDDVVIATKVLGPMGEGPNARGASRAHILAQAKASLQRLQMDHIDLYQIHGFDPVTPIVETLEALDILVKHGHVRYVGLSNWAAWQIVKAVGIAEARKLAPILSLQAYYTLVGRDLEREVVPMLRAEGLGLMVWSPLAGGFLSGKYAAGANDGRRATFDFPPVDLERGDAVIAAMRPLAEAKGVSVAQVALAWLLHQPVVTSVIVGAKRIEQLQDNIRSTEVALSAEDLAALDAVSALPPEYPGWMLERQGHYRAAFAPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC82</accession>
    <name>A0A2M9PC82_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Serine acetyltransferase</fullName>
            <ecNumber evidence="5">2.3.1.30</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_10345</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>acetyl-CoA + L-serine = CoA + O-acetyl-L-serine</text>
            <dbReference type="Rhea" id="RHEA:24560"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.3.1.30"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.30" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000593">
        <property type="protein sequence ID" value="PJN95124.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009001">
        <property type="term" value="F:serine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03354">
        <property type="entry name" value="LbH_SAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045304">
        <property type="entry name" value="LbH_SAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005881">
        <property type="entry name" value="Ser_O-AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000441">
        <property type="entry name" value="CysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="2 5 6" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95124.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="18346" checksum="0A833B6AFC694A49" modified="2018-04-25" version="1">MLRGALGSRCFRPIFTMRLCQWASNSRLRPLLPVFMALHWMASSLGGMELPWRANVGAGFAIHHGYGLVVSPGARIGRNVTMLHGATLGRRDSLGPDLDSPRVSGFPTIEDEVWIGPHAVILGGITVGRGSRIAAGAVVVADVPPHSLVAGNPGRILRSNCRPDVFNPARLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC99</accession>
    <name>A0A2M9PC99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">MBL fold hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_10080</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000574">
        <property type="protein sequence ID" value="PJN95166.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004527">
        <property type="term" value="F:exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10710">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042173">
        <property type="entry name" value="RNase_J_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00849">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="Lactamase_B" evidence="3">
        <location>
            <begin position="19"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00849"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95166.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="308" mass="32865" checksum="6BAF44212E9D99B9" modified="2018-04-25" version="1" fragment="single">MAKPDRLIYLALGGAGEIGMNAYLYGYGPAGSERFILVDLGVTFPTMENAPGVDLIMADIAWIQARADRLDGIFITHAHEDHVGALGLLHARLKAPVYARRFTAAIAQNKMERAGQDPSLVRQAAVWPQRVQAGPFSVGFVPVAHSIPECSSLLIETPAGRILHTADFKTDVDPVVGEAFDAELFRSVGDLGIRAMTCDSTNVFSPQPGRSESGLGGPLQELIASAEGMVVATTFASNVARLKTLAEAGRAAGREVIVLGRAMNTMLKTARTAEVLKSFPPTLDPLDAESVPRHRLLVLATGSQGERR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA6</accession>
    <name>A0A2M9PCA6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000565">
        <property type="protein sequence ID" value="PJN95187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="239" mass="24547" checksum="D323C54888F18CAA" modified="2018-04-25" version="1" fragment="single">LWGDTALRTNGSDSFDSVENVQTGTGADTVFGTSGYNRIWTGSGNDSVYAMGGDDEIRAGSGHDVVVGYGGDETIYGDSGSDHLYGNGGEDAISGASGDDFLQGGDGDDDLWGGDDADTFHFASGDDGVDTIHDFAASEDKLSFGTGYFQGQNQGGFDVSEALWAHSWGGEVLLYADRFGQGLIQIAIIEGVSAGTINQKIANGTIFDVDTSDVGGDGPGGLAPIAPIAVFDPGWDMVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM1</accession>
    <name>A0A2M9PCM1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF3168 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000512">
        <property type="protein sequence ID" value="PJN95295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021508">
        <property type="entry name" value="Gp17-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11367">
        <property type="entry name" value="DUF3168"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15183" checksum="58B7101499D770FE" modified="2018-04-25" version="1">MSAALALQIALRERLLATPAVIDLVPAEHILDRNQRPNPDPSIILGEAQELDDDDSLDRRLVRIYHTFHVWRQEPSLEGVTAIMAAARTAALAGRLALSPGFHCVDLRVASSRAMRDPDGETSHGVMTLEARIQEVET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ1</accession>
    <name>A0A2M9PCQ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000518">
        <property type="protein sequence ID" value="PJN95282.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95282.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7336" checksum="217ECAAE3D9BA59B" modified="2018-04-25" version="1" fragment="single">MDAVRIRSVQPEGRYRAGRCWTAKGVVVGRDELDADAWEAIAADPILRAEPAELEDQEAAAGAEAEIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ4</accession>
    <name>A0A2M9PCQ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 12">Pyruvate kinase</fullName>
            <ecNumber evidence="4 12">2.7.1.40</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">pyk</name>
        <name evidence="15" type="ORF">CNY89_09160</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>ATP + pyruvate = ADP + H(+) + phosphoenolpyruvate</text>
            <dbReference type="Rhea" id="RHEA:18157"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.40"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>K(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29103"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2 12">Carbohydrate degradation; glycolysis; pyruvate from D-glyceraldehyde 3-phosphate: step 5/5.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 12">Belongs to the pyruvate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.1.40" evidence="4 12"/>
    <dbReference type="EMBL" id="PHNO01000502">
        <property type="protein sequence ID" value="PJN95325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00109">
        <property type="reaction ID" value="UER00188"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030955">
        <property type="term" value="F:potassium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004743">
        <property type="term" value="F:pyruvate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1380.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001697">
        <property type="entry name" value="Pyr_Knase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011037">
        <property type="entry name" value="Pyrv_Knase-like_insert_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018209">
        <property type="entry name" value="Pyrv_Knase_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015793">
        <property type="entry name" value="Pyrv_Knase_brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015795">
        <property type="entry name" value="Pyrv_Knase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036918">
        <property type="entry name" value="Pyrv_Knase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015806">
        <property type="entry name" value="Pyrv_Knase_insert_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11817">
        <property type="entry name" value="PTHR11817"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00224">
        <property type="entry name" value="PK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02887">
        <property type="entry name" value="PK_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01050">
        <property type="entry name" value="PYRUVTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50800">
        <property type="entry name" value="SSF50800"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52935">
        <property type="entry name" value="SSF52935"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01064">
        <property type="entry name" value="pyruv_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00110">
        <property type="entry name" value="PYRUVATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 12" id="KW-0324">Glycolysis</keyword>
    <keyword evidence="7 12 15" id="KW-0418">Kinase</keyword>
    <keyword evidence="9 12" id="KW-0460">Magnesium</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11 15" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PK" evidence="13">
        <location>
            <begin position="5"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="PK_C" evidence="14">
        <location>
            <begin position="355"/>
            <end position="467"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008663"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012142"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023317"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00224"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN95325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="482" mass="51583" checksum="263698369E0CC634" modified="2018-04-25" version="1">MRRQRNVKIVATLGPSSDSQEMIRALFLAGADVFRLNMSHGTQEDIARRHGQIRAVEKELGRPIGILADLQGPKLRCGVFADGPVLLKEGQTFRLDLDETPGDIDRVGMPHPEIFAALQVGSTLLVNDGKIRLKVIERSPQHAVTEVIVGGEISNRKGVNVPDVMLPLAALSKKDRADLEFACELGVDWLALSFVQRPEDVYEARELADGRAAILAKIEKPSAVTSFNEILAASDGIMVARGDLGVELPLQSVPPIQKRLTRACRAVGKPVIVATQMMESMITSPVPTRAEVSDVATAIYEGADAVMLSAESAAGEYPVEAVKTMSDVAEAVEGDSIYRQVIESSRVAGSTGVSDAITVAAREVAETTKVKAICCFSHSGTTALLAARERPRVPIIALTPLIGTARRLTLSWGLHTVVVPEVERFKMAVVNAARAARDLGFATEEDRVVVTAGIPFGVAGTTNILRVAPCSEKAIYEGGLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR2</accession>
    <name>A0A2M9PCR2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_09125</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000498">
        <property type="protein sequence ID" value="PJN95331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="52"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="86"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="139"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="184"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="17"/>
            <end position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="23619" checksum="208D452DFF2D812D" modified="2018-04-25" version="1">MIRPFGLDDFLLIAMAIRWTIALSLIAFIGGAVGGLIVALARTADAPAPRRVAAVFIRLFQGTPLLMQLFLVFFGMNIFGLPINPWFAASLALTLHASAFLGEIWRGCIEAVPPGQREAATALGLTYRHRMGSVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRTGQIINNATFSPMMVFGTVALFYFLLCWPLSLMARSMESRFSRASAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU5</accession>
    <name>A0A2M9PCU5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08925</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the myoviridae tail sheath protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000483">
        <property type="protein sequence ID" value="PJN95366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035089">
        <property type="entry name" value="Phage_sheath_subtilisin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020287">
        <property type="entry name" value="Tail_sheath_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04984">
        <property type="entry name" value="Phage_sheath_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17482">
        <property type="entry name" value="Phage_sheath_1C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phage_sheath_1" evidence="2">
        <location>
            <begin position="3"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="domain" description="Phage_sheath_1C" evidence="3">
        <location>
            <begin position="162"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF04984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="30555" checksum="9B057F39841B0918" modified="2018-04-25" version="1" fragment="single">QSVTGQTPRILAAPGFTSTAAAAPVSPVTSALISVAERLRSIVVADGPNATEADALTDRGKYGSDRLYIVDPAVRVFDTESASYVVRPASGYVAGLISKRDQERGFWWSPSNQEVRGIGGTARPISFVLSSTETEANRLNEQEVATIVRTDGYRLWGNRTTSADPLWAFLSVRRTADMIYESIEDAMLWAMDRPFSEQLIRDIRDSVQAYLDTLIARGALLGASCWLDPELNTQVALMAGQLYLDFDIEPPAPLERLTFRAHRNGDYYEDLISSVASAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD15</accession>
    <name>A0A2M9PD15_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleotide-disulfide oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08630</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the NADH dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000461">
        <property type="protein sequence ID" value="PJN95414.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003954">
        <property type="term" value="F:NADH dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006116">
        <property type="term" value="P:NADH oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045024">
        <property type="entry name" value="NDH-2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43706">
        <property type="entry name" value="PTHR43706"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="428"/>
            <end position="508"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95414.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="546" mass="59590" checksum="62AF81CE5B9358B7" modified="2018-04-25" version="1">MRILVLGGGFAGMFAARELRRELGDKAVIELINDVNYFVFQPLLPEVAAGAVSIRDAVSPLRRLLPGVRLRQAQIFGVDLERKVAVIFQGLQRRYTEVPYDHLVVALGQSVDLSRFPGLAAHALPMKTLADAMALRNHVIDKLEHADITALPEVKKELLTFTVIGGGFSGVETAGEMKDLIDRSLEFYPNIDPKEVRILVIEFADRLLGELPASLGDYARTFFEKRGIEVLLKTGVKEATGTAIVTSSGELIGTRTVVATIGNAPTPLVAKMGLPNDRGRVKTDRSLRVEGHADVWSLGRRGADPAGRGPLGAGALRAPTAQFAVREARHLAKNMRAALEGKPVEPFVYKSKGAMASLGGGRGVAEVYGMRLSGFPAWLLWRSYYLSFVPGFATRIRIAAQWMLDLVLGRSTVQTGSKTARTTRYLRYRAGDRVFEEGNRADGFYTVIEGAFELSIREPDGAVTDRRIGPGGHFGERVLLGEGLRTGSVRALEDSVVLIVDPEDFQRLARAMPPLSEYFRDYLSATFQTEAAPERLRASAETDAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD45</accession>
    <name>A0A2M9PD45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000439">
        <property type="protein sequence ID" value="PJN95467.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046150">
        <property type="entry name" value="DUF6152"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19649">
        <property type="entry name" value="DUF6152"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014916016" evidence="1">
        <location>
            <begin position="25"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95467.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13482" checksum="14075E34E6606F05" modified="2018-04-25" version="1">MPAPTRAGSVLALAALLAAGTASAHHGWSWAEPEQSELAGVVRAVSMAPPHPSLEVEAEDGTLWRIDLSNPRQTAASGFDGDSAEPGDAIQILGNRSAREGERLMKAVRILVDGQVYDIYPDRIRTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD86</accession>
    <name>A0A2M9PD86_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heme ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08230</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000432">
        <property type="protein sequence ID" value="PJN95483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="11"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="280"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="30306" checksum="794C57C66797424A" modified="2018-04-25" version="1" fragment="single">MDAPVSDGLAIELVGVSKSFGPVQANKDIHLAVRRGTIHGIVGENGAGKSTLMSILFGFYQADAGEIRVNGRALDIPDSQTAIAAGIGMVHQHFMLVEPFTVLENVVLGAEGGPLLKPSLARAREELTRLARDYELNVDPDAVVGELSVGLQQRVEILKALYRQADILILDEPTGVLTPSEADHLFRILGFLREQGKTIILITHKLREIMAITDEVSVMRRGEMVRTLTTAQTDPSEIAELMVGRRVLLRVDKAPATPGEVLLSVRGLSLVDGRGVARLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD94</accession>
    <name>A0A2M9PD94_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CMD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000427">
        <property type="protein sequence ID" value="PJN95494.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051920">
        <property type="term" value="F:peroxiredoxin activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029032">
        <property type="entry name" value="AhpD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003779">
        <property type="entry name" value="CMD-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02627">
        <property type="entry name" value="CMD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69118">
        <property type="entry name" value="SSF69118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CMD" evidence="1">
        <location>
            <begin position="34"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02627"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95494.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="15996" checksum="BF857F2BF1EC9D3B" modified="2018-04-25" version="1" fragment="single">MTHETRLERGRRALAEIDGEAGARVVDALADIAPDFATYLLEFPFGDIYARPGLGLREREIATIAALAAMGNAAPQLKVHLEAGLNVGLTRAEIVEILMQIAVYAGFPAALNGLFAAREASTSEVYGRNPAVPWSETATGCSARLPSTAGAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB2</accession>
    <name>A0A2M9PDB2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Succinate-semialdehyde dehydrogenase (NADP(+))</fullName>
            <ecNumber evidence="6">1.2.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gabD</name>
        <name evidence="6" type="ORF">CNY89_08120</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.16" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000425">
        <property type="protein sequence ID" value="PJN95502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009013">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="5">
        <location>
            <begin position="1"/>
            <end position="306"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="311" mass="32586" checksum="8CFE836B6FEF7253" modified="2018-04-25" version="1" fragment="single">AGCGFVAKPASETPLSALAMAVLAERAGVPPGLFSVVTSSSSSTIGKTFCSHPKVRKLTFTGSTEVGRILLAQAAEQVLKCSMELGGNAPFIVFDDADLDAAAEGAMISKYRNNGQTCVCANRIYVQAGVYDAFAAKLAEKAAALKIGDGFEPGVQAGPLITEKAVEKVEAHIADALAKGAKVALGGRRSPLGGTFFEPTILTGVTRDMAVATDETFGPVAPLFRFETEADVIAQANDTIFGLASYFYARDLARVWRVAEALEYGMVGINTGLISTEVAPFGGVKQSGLGREGSHHGIEDYLEMKYLCMSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDR6</accession>
    <name>A0A2M9PDR6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000342">
        <property type="protein sequence ID" value="PJN95697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006521">
        <property type="entry name" value="Tail_protein_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09684">
        <property type="entry name" value="Tail_P2_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12730" checksum="0C2203C868CF47FC" modified="2018-04-25" version="1">MAEAIPLHQRKGTRASIVRALRVAGYGDAELIENQAAARHDGGATYGGAIDHMRSDHWAEYRLILSRPVTIRQAAQVRSILDATAPARCHLKVMDFVAVAHLHNGAIRNDGAFAHGAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE14</accession>
    <name>A0A2M9PE14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06510</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000309">
        <property type="protein sequence ID" value="PJN95776.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014993725" evidence="1">
        <location>
            <begin position="21"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95776.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14529" checksum="5BF19958675BACDC" modified="2018-04-25" version="1" fragment="single">MIRKVLLALLLTLIAGLALAQTAEPVETIRTAPVVLDGRILYEVRGTSAITPEERAAGIRRNLLAAAEDPAFDPAAMTLLPIAGGVELRAGDRVIRGVYDADARLEGVETSVLAGSVRIRTARAIETWRADRSITD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE21</accession>
    <name>A0A2M9PE21_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">D-3-phosphoglycerate dehydrogenase</fullName>
            <ecNumber evidence="5">1.1.1.95</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_06600</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 5">
            <text>(2R)-3-phosphoglycerate + NAD(+) = 3-phosphooxypyruvate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:12641"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18110"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="EC" id="1.1.1.95"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 5">Amino-acid biosynthesis; L-serine biosynthesis; L-serine from 3-phospho-D-glycerate: step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 5">Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.95" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000315">
        <property type="protein sequence ID" value="PJN95763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00135">
        <property type="reaction ID" value="UER00196"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004617">
        <property type="term" value="F:phosphoglycerate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006564">
        <property type="term" value="P:L-serine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029009">
        <property type="entry name" value="ASB_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006139">
        <property type="entry name" value="D-isomer_2_OHA_DH_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029753">
        <property type="entry name" value="D-isomer_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006140">
        <property type="entry name" value="D-isomer_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006236">
        <property type="entry name" value="PGDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045626">
        <property type="entry name" value="PGDH_ASB_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00389">
        <property type="entry name" value="2-Hacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02826">
        <property type="entry name" value="2-Hacid_dh_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19304">
        <property type="entry name" value="PGDH_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143548">
        <property type="entry name" value="SSF143548"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01327">
        <property type="entry name" value="PGDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00670">
        <property type="entry name" value="D_2_HYDROXYACID_DH_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00671">
        <property type="entry name" value="D_2_HYDROXYACID_DH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0718">Serine biosynthesis</keyword>
    <feature type="domain" description="2-Hacid_dh" evidence="6">
        <location>
            <begin position="4"/>
            <end position="315"/>
        </location>
    </feature>
    <feature type="domain" description="2-Hacid_dh_C" evidence="7">
        <location>
            <begin position="108"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="domain" description="PGDH_inter" evidence="8">
        <location>
            <begin position="327"/>
            <end position="446"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005216"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005854"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363003"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF02826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF19304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="530" mass="55560" checksum="363CC1D32A2C5E5B" modified="2018-04-25" version="1">MPKVLISDELSDAAVQIFRDAGVEVDFQPQLGKDPARLAEIIGDYDGLAIRSATKVTAELLARADRLKVVGRAGIGVDNVDIPAASAKGVVVMNTPFGNSITTAEHAIAMMFACARQIPAADASTRAGKWEKSKFMGVEITGKTLGLIGAGNIGSVVAARAIGLRMKVVAYDPFLSAERAQTMGVERIENLDDLLARADFITLHLPKTAQTANLLSAERIAKMKPGARLINCARGGLVDEAAVAEALKSGHLAGAAFDVFSVEPAKENPLFSAPNVVCTPHLGASTSEAQENVALQVAEQMSDYLTTGAISNALNAPSVTAEEAPILKPWVALAEMLGSFAGQVTEHPITGIEIEYVGEVGDLNLKPLTAALTAGLLRPLVGEGGVNMVSAPLVARERGIQIAETRRDAQGAFGSYVRLVVTTEAFTRSVAGTIYSDGKPRFIQIKGIGLEAEPMPFMLYTTNTDTPGYIGALGTKLGALGINIATFALGRAEKSGEAIAFLGVDEAVSEEALAELASLPQIRQAKALRF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE98</accession>
    <name>A0A2M9PE98_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000279">
        <property type="protein sequence ID" value="PJN95866.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="105"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95866.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="21154" checksum="D5517D7E195164D2" modified="2018-04-25" version="1">MPESNEDAALVEAVERAACWTISSSIAEEMIAIVRAHDASAQAATIATLTAERDEARALVAEANNSLYGSQNYFHSLNGGDFDKHHLSRGIEELKETSKRWWRATRFAEAERDEAQERATRAEAERYELLARNHHGRRALEFADREAEKNEIAMMAEIERLRALPLPAAPPPDAIAALRAAKPHAPDEDE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA7</accession>
    <name>A0A2M9PEA7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Imidazole glycerol phosphate synthase subunit HisH</fullName>
            <ecNumber evidence="9">4.3.2.10</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">IGP synthase glutaminase subunit</fullName>
            <ecNumber evidence="9">3.5.1.2</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">IGP synthase subunit HisH</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">ImGP synthase subunit HisH</fullName>
            <shortName evidence="9">IGPS subunit HisH</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">hisH</name>
        <name evidence="12" type="ORF">CNY89_05940</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + L-glutamine = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate + H(+) + L-glutamate</text>
            <dbReference type="Rhea" id="RHEA:24793"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58278"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="ChEBI" id="CHEBI:58525"/>
            <dbReference type="EC" id="4.3.2.10"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2 9">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 5/9.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 9">Heterodimer of HisH and HisF.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.10" evidence="9"/>
    <dbReference type="EC" id="3.5.1.2" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000276">
        <property type="protein sequence ID" value="PJN95876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00031">
        <property type="reaction ID" value="UER00010"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000107">
        <property type="term" value="F:imidazoleglycerol-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01748">
        <property type="entry name" value="GATase1_IGP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00278">
        <property type="entry name" value="HisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010139">
        <property type="entry name" value="Imidazole-glycPsynth_HisH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42701">
        <property type="entry name" value="PTHR42701"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000495">
        <property type="entry name" value="Amidotransf_hisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01855">
        <property type="entry name" value="IMP_synth_hisH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="7 9" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="6 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0456">Lyase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GATase" evidence="11">
        <location>
            <begin position="5"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="9 10">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <feature type="active site" evidence="9 10">
        <location>
            <position position="192"/>
        </location>
    </feature>
    <feature type="active site" evidence="9 10">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011152"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000495-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22941" checksum="92AD7E3632008833" modified="2018-04-25" version="1">MTTVIVDYESGNLHSAEKSFQRMAREIGAPPVTVSSDPEVVRRAERIVLPGVGAFADCRAGLMARSGLFEAIEERAIRQGAPFLGICVGMQMMATRGLEHGESAGFDWIPGEVRRIEPSDPALKIPHMGWNALEILRPHPLLNGIASGDHAYFVHSYHLAAARPEEVLATTDHGGTVTAAVARDNLAGTQFHPEKSQATGLRLIANFLAWKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC7</accession>
    <name>A0A2M9PEC7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000279">
        <property type="protein sequence ID" value="PJN95868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12211" checksum="5C36C9A73FAE2F6D" modified="2018-04-25" version="1">MSERLGRREQSLLFINRRGYAPLTICRACGHQIGCDQCDGSPVGGHSPLQIGPAASSRQRGPRAREGSKRLALGCAKCQETPREATWRSGYAADCKSGAFPAKSTPSPQNPPET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED2</accession>
    <name>A0A2M9PED2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000273">
        <property type="protein sequence ID" value="PJN95883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01381">
        <property type="entry name" value="HTH_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="41"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17034" checksum="F177133077919258" modified="2018-04-25" version="1">MESLRLDAPASGVPARAIDLRGVTVVSLSAHDIDVHVGKKLRDRREALGISQGRLGRHLGLTFSQVQKYEKGANRIGAGRLFQVAAYLGVPPSYFFETLGEAAAPGDAPPVVSAVTPEELRQVGLVFSAIPEAETRESVLALMRSLAQSTRRETVATED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG0</accession>
    <name>A0A2M9PEG0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Cytochrome-c oxidase, cbb3-type subunit III</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ccoP</name>
        <name evidence="11" type="ORF">CNY89_05690</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell inner membrane</location>
            <topology evidence="3">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000260">
        <property type="protein sequence ID" value="PJN95913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008168">
        <property type="entry name" value="Cyt_C_IC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004678">
        <property type="entry name" value="Cyt_c_oxidase_cbb3_su3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00605">
        <property type="entry name" value="CYTCHROMECIC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00782">
        <property type="entry name" value="ccoP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 9" id="KW-0349">Heme</keyword>
    <keyword evidence="8 9" id="KW-0408">Iron</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Cytochrome c" evidence="10">
        <location>
            <begin position="20"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome c" evidence="10">
        <location>
            <begin position="116"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21956" checksum="834DB5135D4C697B" modified="2018-04-25" version="1" fragment="single">RILATPITEIRQRSRRLERFAIAGGGAVFRNNCGQCHGAGGQGALGGFPNLLDDDWLWGGTLDEIQQTITHGIRYDADSDTRFSQMPAFGEVLEPAQIDDLVQYVLQISGQDNDAAQAAAGKALFLENCSSCHGEDGKGSKEFGAPNLTDLIWLYGGDAATIRHTITYARYGIMPSFSLNNRLRPEDIRKVALYVHSLGGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK5</accession>
    <name>A0A2M9PEK5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Type II secretion system protein GspD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gspD</name>
        <name evidence="10" type="ORF">CNY89_05620</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell outer membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial secretin family. GSP D subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000256">
        <property type="protein sequence ID" value="PJN95924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009279">
        <property type="term" value="C:cell outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015627">
        <property type="term" value="C:type II protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015628">
        <property type="term" value="P:protein secretion by the type II secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1370.120">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001775">
        <property type="entry name" value="GspD/PilQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005644">
        <property type="entry name" value="NolW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038591">
        <property type="entry name" value="NolW-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004846">
        <property type="entry name" value="T2SS/T3SS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013356">
        <property type="entry name" value="T2SS_GspD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004845">
        <property type="entry name" value="T2SS_GspD_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00263">
        <property type="entry name" value="Secretin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03958">
        <property type="entry name" value="Secretin_N"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00811">
        <property type="entry name" value="BCTERIALGSPD"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02517">
        <property type="entry name" value="type_II_gspD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00875">
        <property type="entry name" value="T2SP_D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1134">Transmembrane beta strand</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="8">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014689751" evidence="8">
        <location>
            <begin position="28"/>
            <end position="683"/>
        </location>
    </feature>
    <feature type="domain" description="Secretin_N" evidence="9">
        <location>
            <begin position="134"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="domain" description="Secretin_N" evidence="9">
        <location>
            <begin position="197"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="domain" description="Secretin_N" evidence="9">
        <location>
            <begin position="271"/>
            <end position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022452"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03958"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="683" mass="71877" checksum="CA06B30B17B522AA" modified="2018-04-25" version="1">MIEPSLLTRRLLLALILLALAQSPVRAQAPVADPPTFVINLRDADIRALSEQVSEITGRTLILDPAVTGLVTVISQQPLDEEGVWELFQSVLGVQGFAALRSGSIWRVIPQGYVRESGGEVSDDPDAGRLDVVTRLIQLQNFPASTAVAALRPLVANFGYIEALPETNTLVVTDSSENVGRIEEIARTLDQGDGSQVSTVPVRNADAREIASALTAVLGGESGGLSPRVAIDARGNVLLVRGSPEMIDKVRTLVTDLDQPGRQLPSLVPVTRVYRLRFADAATTTEVLRGVVGAQAGVTSAMVESVGREPFAGLSGGAQAEVADAFGTAGTGTGDTVTELNFSPPPVTSFASEDITIQAAIDINAVVIRARAEVQADLAQLVAQLDQRRPQVLIEAAIVEISGDIAEQLGVQLGFGNAAPQAGFAATSFSNSGVSLANILRILGVPVAPAVSTGLSIGLSEEDKYGILVQALGQSSKANLLSTPSITTLDNQAASILVGQNVPFRTGTYATSGTGSDPFTTIERQDIGITLSVTPRVNQGDAVQLDVTQEVSSISNAVVPNAADIITNRRLIETTVLADNGGTIVLGGLITDDRTSAKSQIPGLGNIPVLGRLFSSSNENGTKRVLFVFLRPTILRNRADINTVSANRFQRLRSIEARSSDKPNLLAEPKPIRRLPVEINGLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN5</accession>
    <name>A0A2M9PEN5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Co-chaperone YbbN</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_05160</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000231">
        <property type="protein sequence ID" value="PJN95996.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015036">
        <property type="term" value="F:disulfide oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017937">
        <property type="entry name" value="Thioredoxin_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48452">
        <property type="entry name" value="SSF48452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00194">
        <property type="entry name" value="THIOREDOXIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="2" id="KW-0676">Redox-active center</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="1"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95996.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="22814" checksum="4DDEB17A613BA2B9" modified="2018-04-25" version="1" fragment="single">MDLNLSTKPKEDLVKDGSDQTFMADVIEASMEAPVIVDFWAAWCGPCKTLGPILEKEVAAARGKVRMVKIDVDKNQMVASQLRVQSIPAVYAFFQGQPVDAFTGAQTAGQVKAFVERLAAMAGEEPGLEEALTAAEEMIEEGDLAGAVETFAAILAEEEGNLRAIAGMARAHLSLGEYDRAKGILALAPKGKEGDALIAAVRAQIELAEAAQKAGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN7</accession>
    <name>A0A2M9PEN7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Copper oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_05265</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000237">
        <property type="protein sequence ID" value="PJN95982.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011707">
        <property type="entry name" value="Cu-oxidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07732">
        <property type="entry name" value="Cu-oxidase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014877024" evidence="1">
        <location>
            <begin position="31"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="3">
        <location>
            <begin position="97"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="2">
        <location>
            <begin position="248"/>
            <end position="359"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="360"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF07732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95982.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="360" mass="40216" checksum="C517F04124F71403" modified="2018-04-25" version="1" fragment="single">MLLSPVSRRSTLGALFVGAMGPGLVATASAAAAQTAMPGHGGHGAPDDRTGGNQLVGVVDHVANGFDPTAMLTDFDYGEVSTLPDGRTLREWVVTATEREIEIAPGVTFPAWTYNNRVPGPAFRCVEGERLRIVFQNGGTHPHSIHFHGIHSWRMDGVPGAGVIEPGGEFTYEFDARPFGCHLYHCHAMPLKRHIHKGMYGAFIVDPDPERHPDQRMAALSRRHGTAENADWQELVMVMNGFDTNFDDENEFYAVNSIPFAYVDRPIRIERSRPVRVYLVNITEFDPINSFHLHANFFDYYDHGTTLVPTHRTIDTVMQCQGQRGILEFSFAEHEPGLYMFHAHQSEFAELGWMSHFEVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ7</accession>
    <name>A0A2M9PEQ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000218">
        <property type="protein sequence ID" value="PJN96035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.109.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029479">
        <property type="entry name" value="Nitroreductase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000415">
        <property type="entry name" value="Nitroreductase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00881">
        <property type="entry name" value="Nitroreductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55469">
        <property type="entry name" value="SSF55469"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nitroreductase" evidence="1">
        <location>
            <begin position="9"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24606" checksum="5E1CE84B2B16D521" modified="2018-04-25" version="1">MDDDFASLMRRRRSIRAYRDLPVARALIEDICRLARMAPSGANLQPGRFHVLTGAPLRGLIADLDAAIVGGAPAVEEYSYFPDPMPSALKARRQAAGYALYRALGIERRDVEGRRRQFQRNYAFFGAPVGVVVTIDRTMGKGCFMDLGMSLMALLLAAEDRGLGATGIGALANYGPEVHRILELPAEEMVVCGLALGWPDREAPENGFRTEREDLPAFTSFRGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER7</accession>
    <name>A0A2M9PER7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000220">
        <property type="protein sequence ID" value="PJN96026.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="26"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96026.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10915" checksum="6E9E3B388C0D5121" modified="2018-04-25" version="1" fragment="single">MPTGLREKAMNREAPAAAETLMADEAYARLISALRHARLAAGQFVSMSSLMETLDLPLAPTREAVKRASVEGLVQVLPKRGVMVMGADATATRDCIDLRACS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF03</accession>
    <name>A0A2M9PF03_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Ti-type conjugative transfer relaxase TraA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">traA</name>
        <name evidence="5" type="ORF">CNY89_04445</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MobA/MobL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000191">
        <property type="protein sequence ID" value="PJN96119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005053">
        <property type="entry name" value="MobA_MobL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014136">
        <property type="entry name" value="TraA_Ti"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03389">
        <property type="entry name" value="MobA_MobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02768">
        <property type="entry name" value="TraA_Ti"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0184">Conjugation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobA_MobL" evidence="4">
        <location>
            <begin position="1"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="726"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="797"/>
            <end position="960"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="734"/>
            <end position="753"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="3">
        <location>
            <begin position="761"/>
            <end position="784"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="840"/>
            <end position="855"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="960" mass="105300" checksum="6C658D00F48790C9" modified="2018-04-25" version="1" fragment="single">WNAAEAAEKRKDGRTAREFEIALPHELTAEQRLETTRIFARAMADRYLTAVDFAIHAPNRDSNMLNHHAHILMTTRTLGPEGLGEKSLIEKENKWLLARDMPTTDMQLRDVRQLWERTANQQLAEYGHDVRIDHRSHAERGLEIEPTQHIGVHANQMDKRGVEVSRSRLDAAAAQRNAELIREKPEQVLTLISGEKSVFDRNDIARALHRYIDEAGPFQAAFAKVMASPALVELQAEKADARGNVAELARYSTRELIGIEHEMADSAVRMAETRGHGIAGRHVEAALSDHDKAIRLGVAAHVEAQVSRGDLSEVEGRAAIASARLSDEQRQAVRHITGESQIAAVVGLAGAGKSTMLSAARQAWEAQGYTVRGAALAGKAAEGLEESAGIQSRTLASYEYGWKDGRGQLGMRDVLVVDEAGMIGSRQLARFVAAAEAAGAKLVLVGDHEQLQAIGAGAPFRAIAERIGSAELSDVRRQREDWQRDASQDFARHKTADGLAAYEKRGGIKFKDSHDEARAALVRDYLADLEQRPDGSRIATAHRRADVAALNQAIREGRQERGQIGRGEEAGEKVFATRDGKRAFVTGDRIVFLENNRELGVKNGMLGTVTELEDGRITARLDGKDHDGGERIVSVAVEDYAAIDHGYATTIHKTQGATVDRAFLLAGKTMDRHLTYVGMTRHRDGAALYAGRDEFKDMADLSRRLGRAGTKETTLDYDASRAFRPAAKKPLLPSRSPLEERQDGAKIKNARSLDAARRAAVSAQHKAEYDQRMKARAEAEAPQKAAELARLRQVAADRQAEISRQPQPPQEAEAKRSLFARAADALLSRFGLRDASPAEKTPAQDNTSRTAPETAQERPKTVAPPEAQPERAKAPQKAQEAEAAPVYAPQSEFQKKAAQPAPEPQPEAFSPARALWENAVQPQPEPQRDQAAEAARALWQNATPAPMPEPTHTPERSNER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF18</accession>
    <name>A0A2M9PF18_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cytochrome c-type biogenesis protein CcmE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Cytochrome c maturation protein E</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Heme chaperone CcmE</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ccmE</name>
        <name evidence="7" type="synonym">cycJ</name>
        <name evidence="9" type="ORF">CNY89_04355</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Single-pass type II membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the CcmE/CycJ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000187">
        <property type="protein sequence ID" value="PJN96133.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017003">
        <property type="term" value="P:protein-heme linkage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01959">
        <property type="entry name" value="CcmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004329">
        <property type="entry name" value="CcmE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036127">
        <property type="entry name" value="CcmE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34128">
        <property type="entry name" value="PTHR34128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03100">
        <property type="entry name" value="CcmE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82093">
        <property type="entry name" value="SSF82093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 7" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="1 7 8" id="KW-0349">Heme</keyword>
    <keyword evidence="7 8" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="2 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="topological domain" description="Cytoplasmic" evidence="7">
        <location>
            <begin position="1"/>
            <end position="10"/>
        </location>
    </feature>
    <feature type="topological domain" description="Extracellular" evidence="7">
        <location>
            <begin position="32"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="binding site" description="covalent" evidence="7 8">
        <location>
            <position position="124"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="7 8">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01959"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR604329-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96133.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16559" checksum="D28F69BBBF0B9E8C" modified="2018-04-25" version="1">MAVGLKKRRRIQLVVIGAVLLALATGIIGYAMRDGIEFFRSPSQLASHPPREGERFRLGGLVEEGSFLRDQGTRAQFVVTDGGASTAVVFEGILPDLFREGQGVIATGQMEGETFVASEVLARHDESYMPKEVADALKEQGMFHYGGGVGGDSGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF47</accession>
    <name>A0A2M9PF47_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11 12">ATP synthase subunit a</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">ATP synthase F0 sector subunit a</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">F-ATPase subunit 6</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="primary">atpB</name>
        <name evidence="13" type="ORF">CNY89_04085</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="11 12">Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="11 12">Cell membrane</location>
            <topology evidence="11 12">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 11 12">Belongs to the ATPase A chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000174">
        <property type="protein sequence ID" value="PJN96177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045263">
        <property type="term" value="C:proton-transporting ATP synthase complex, coupling factor F(o)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046933">
        <property type="term" value="F:proton-transporting ATP synthase activity, rotational mechanism"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.220">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01393">
        <property type="entry name" value="ATP_synth_a_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000568">
        <property type="entry name" value="ATP_synth_F0_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023011">
        <property type="entry name" value="ATP_synth_F0_asu_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045083">
        <property type="entry name" value="ATP_synth_F0_asu_bact/mt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035908">
        <property type="entry name" value="F0_ATP_A_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11410">
        <property type="entry name" value="PTHR11410"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00119">
        <property type="entry name" value="ATP-synt_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00123">
        <property type="entry name" value="ATPASEA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81336">
        <property type="entry name" value="SSF81336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01131">
        <property type="entry name" value="ATP_synt_6_or_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00449">
        <property type="entry name" value="ATPASE_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 11" id="KW-0066">ATP synthesis</keyword>
    <keyword evidence="11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 11 12" id="KW-0138">CF(0)</keyword>
    <keyword evidence="6 11 12" id="KW-0375">Hydrogen ion transport</keyword>
    <keyword evidence="8 11 12" id="KW-0406">Ion transport</keyword>
    <keyword evidence="9 11" id="KW-0472">Membrane</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 11 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 11" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 11 12" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="95"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="125"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="154"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="199"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="11">
        <location>
            <begin position="228"/>
            <end position="246"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023310"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01393"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="RuleBase" id="RU000483"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="254" mass="27232" checksum="4FCFFE9133E131DA" modified="2018-04-25" version="1">MATEGGHEGGSGFNIHPMDQFRVHPLFGGTEVHWYTPTNATLWMLLVVGAIALLMVVGSRGRQLVPSRAQSAAEVTYGFVRKMVEDIAGKEGMKYFPYIFTVFLFILFANLLALIPASFAPTSHIAVTALLAIAVFVTVTVIGFVKHGAHFLNLFWVSSAPTVALRIVLAVIEVISYFVRPLSHSIRLAGNLMAGHAVLKVFAGFAGALGAGAVIPIVAITAIYGLELLVACIQAYVFTILTVVYLNDALHPGH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF73</accession>
    <name>A0A2M9PF73_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000167">
        <property type="protein sequence ID" value="PJN96200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="66"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="11563" checksum="CC6AA06AA831BFDF" modified="2018-04-25" version="1" fragment="single">GTLTAPGDFGAAGGRCRLRIAASDVSLLRETPQGSSVLNFPPARIVSAERQGAAMLTVVLALGEAGQARGSSPGSPGCPGSGWASPPGRRSWRRSRAWRWSPRRLRPATGGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA0</accession>
    <name>A0A2M9PFA0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000178">
        <property type="protein sequence ID" value="PJN96164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14982" checksum="A27E1E8FECE2C08B" modified="2018-04-25" version="1">MDLLQLVNIEGKELLGETYGWRFPADIAGLVRPRMLGVYPDLADLAITHAWGGTLAITTNRMPAFQRLDGVAYAAGGYSGHGVAIATLAGKLIAEAVRGEAERFDVFAGLPQQGFPGGALLRWPLLALAMSWYALRDRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB3</accession>
    <name>A0A2M9PFB3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sulfate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000161">
        <property type="protein sequence ID" value="PJN96226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008271">
        <property type="term" value="F:secondary active sulfate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.750.24">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001902">
        <property type="entry name" value="SLC26A/SulP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002645">
        <property type="entry name" value="STAS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036513">
        <property type="entry name" value="STAS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11814">
        <property type="entry name" value="PTHR11814"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01740">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52091">
        <property type="entry name" value="SSF52091"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50801">
        <property type="entry name" value="STAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="domain" description="STAS" evidence="2">
        <location>
            <begin position="52"/>
            <end position="167"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="18916" checksum="8577D7C0F3F2A646" modified="2018-04-25" version="1" fragment="single">IALAGPIGLGVLNGVVIAIGATLAYVLVKNMYPRDAMLGLVPGRDGFYKLHRRMDARAVPGLAICLIEGSILFFNADHVQRRLRAVAAGLPSDARWLVLDATAVVQVDSTAAGMLDEMRIELAARGLRLGFAELNSEVRDLLARAGLLDAIGAEMIFEDLEDALRAFHAQPKEETP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC6</accession>
    <name>A0A2M9PFC6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Outer membrane lipid asymmetry maintenance protein MlaD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">mlaD</name>
        <name evidence="2" type="ORF">CNY89_03835</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000162">
        <property type="protein sequence ID" value="PJN96222.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015914">
        <property type="term" value="P:phospholipid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030970">
        <property type="entry name" value="ABC_MlaD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003399">
        <property type="entry name" value="Mce/MlaD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02470">
        <property type="entry name" value="MlaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04430">
        <property type="entry name" value="OM_asym_MlaD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MlaD" evidence="1">
        <location>
            <begin position="37"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96222.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15106" checksum="FC494A2DA753DBE6" modified="2018-04-25" version="1">MTRNSAAETAIGALVVATAVGFVLYASQVAGRSATSGYPLTARFGSVEGISVGTDVRLAGIRVGSVTGLELDPATYQAKATFTVTRELEIPEDSDVKIASEGLLGGSFLEITPGASEFMLAEGTEVLNTQSSVSLLNLLMRFAGGSK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC9</accession>
    <name>A0A2M9PFC9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">SCP domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000157">
        <property type="protein sequence ID" value="PJN96239.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.33.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014044">
        <property type="entry name" value="CAP_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035940">
        <property type="entry name" value="CAP_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00188">
        <property type="entry name" value="CAP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55797">
        <property type="entry name" value="SSF55797"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SCP" evidence="1">
        <location>
            <begin position="193"/>
            <end position="310"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96239.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="35167" checksum="2D44C1A1BAC8EB95" modified="2018-04-25" version="1">MRSFSRRSLYPGVERENGMPKWSFTSGRSGFRYEDDAFRFTDAPGAADGRWEDGALRLDLGRVNGQSSGGWSKGFILEERSEATLSFRYAIWMSPDNRSRDVTDLMVSIDGEQVGAASRGLTGDGPGGATKTGWRTVEIDLGALAPGRHEITIGGFANSRSDRDDRSVVRIDDVDLSWRAPAADLDPFEAEVLRLTNAYRERNSRDPLRADPELTASAEDWSRQMGRGDFFRHSDTAKQIEKFGYDAVGWGENIAAGYPTPKAVVDGWIDSPGHRRNLLRADFEDIGIGYHRQANDGGDAPYTHYWTQIFGVADEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE5</accession>
    <name>A0A2M9PFE5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000148">
        <property type="protein sequence ID" value="PJN96266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037120">
        <property type="entry name" value="Haem_peroxidase_sf_animal"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="SSF48113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8336" checksum="C9C680D2BC45AABF" modified="2018-04-25" version="1">MDLQRNAEGVAILGDPRNDEKVVVSQLQRLFARFHNAVYDDPDFTRDCGADARSRRRCGSTGRRSSGRTPRRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL2</accession>
    <name>A0A2M9PFL2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Heme lyase NrfEFG subunit NrfE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_03175</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015232">
        <property type="term" value="F:heme transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017004">
        <property type="term" value="P:cytochrome complex assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032523">
        <property type="entry name" value="CcmF_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002541">
        <property type="entry name" value="Cyt_c_assembly"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003567">
        <property type="entry name" value="Cyt_c_biogenesis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003568">
        <property type="entry name" value="Cyt_c_biogenesis_CcmF"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43653">
        <property type="entry name" value="PTHR43653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16327">
        <property type="entry name" value="CcmF_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01578">
        <property type="entry name" value="Cytochrom_C_asm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01410">
        <property type="entry name" value="CCBIOGENESIS"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01411">
        <property type="entry name" value="CCMFBIOGNSIS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6" id="KW-0201">Cytochrome c-type biogenesis</keyword>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="38"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="96"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="126"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="207"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="273"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="352"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="394"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrom_C_asm" evidence="8">
        <location>
            <begin position="89"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="domain" description="CcmF_C" evidence="9">
        <location>
            <begin position="315"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="433"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022748"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF16327"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="433" mass="46822" checksum="D2B469D4A3A18C47" modified="2018-04-25" version="1" fragment="single">MIVELGHLALVLAFAVALVQAVVPMVGAARGWSDWMRVATPAALAQFALTLFAFGALMRAFATSDFSVALVANNSHSAKPLIYKLSGTWGNHEGSMLLWVLILTLFGAMVAFGGGNLPPALKARALAVQATIGAAFLGFILWTSNPFVRLAAPPMDGADLNPLLQDPGLAFHPPFLYLGYVGLSMAYSFAIAALIEGRVDAAWARWVRPWTLLAWMFLTIGIAMGSFWAYYELGWGGWWFWDPVENVSFMPWLLSGALLHSAIVVEKRDALKAWTILLAILAFSFSLIGAFVVRSGIITSVHAFASDPERGVYLLWLLAAFIGGSLTLYAWRAPILKTTAVFSTVSREAGLLVNNLLLVSATLVVFFGTMWPLLAEVLTGRKISVGAPFFDLAFTPFMVAIAVILPVFGALPWKRGDLGRAMRPLWGALALSV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY6</accession>
    <name>A0A2M9PFY6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">DNA polymerase IV</fullName>
            <ecNumber evidence="4">2.7.7.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02890</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the DNA polymerase type-Y family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000112">
        <property type="protein sequence ID" value="PJN96384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03586">
        <property type="entry name" value="PolY_Pol_IV_kappa"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022880">
        <property type="entry name" value="DNApol_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001126">
        <property type="entry name" value="UmuC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00817">
        <property type="entry name" value="IMS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50173">
        <property type="entry name" value="UMUC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="UmuC" evidence="3">
        <location>
            <begin position="37"/>
            <end position="192"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="215"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="222"/>
            <end position="238"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="238"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50173"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="238" mass="25622" checksum="0838E5B86075ABD6" modified="2018-04-25" version="1" fragment="single">MPSLCRDCLTPSPDPGRCPACRSPRTVAHPELLDLAIAHVDCDAFYASVEKRDDPSLRDVPLIVGGGQRGVVTTACYLARIHGVRSAMPMFQARRLCPQAVVVKPRMARYVEVSRQIRALMEALTPLVEPLSLDEAFLDLTGTERLHKAPPALLLARLQARVEAELGVSVSVGLSHNKFLAKTASDLDKPRGFSVIGRAETAAFLAGGHDHRLGGGSGRAFRRGAGDERVREPGPGHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG32</accession>
    <name>A0A2M9PG32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">PAS domain-containing sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_02175</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000080">
        <property type="protein sequence ID" value="PJN96498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007165">
        <property type="term" value="P:signal transduction"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045671">
        <property type="entry name" value="NtrY-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013767">
        <property type="entry name" value="PAS_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00672">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19312">
        <property type="entry name" value="NtrY_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00989">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00304">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50112">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="21"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="101"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="301"/>
            <end position="323"/>
        </location>
    </feature>
    <feature type="domain" description="HAMP" evidence="5">
        <location>
            <begin position="324"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="domain" description="PAS" evidence="4">
        <location>
            <begin position="389"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="435"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="472"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="472" mass="51832" checksum="C934F863EE44D9D7" modified="2018-04-25" version="1" fragment="single">MRSPNLTLAGDRLARLVEHATVKAILFWGFIALAPVLAVLTFLTLSEVDLLIGSEALRVVLLADFVYALVVAAFVARRLVEMLAARRRRSEGSRLHLRLMRVFTLVALVPTVLVAVFATITVNFGLEGWFSDRVRNVVANSLAAAQAYEEEHRTTLQSDAAQLAGFLDAQKERYPLLTGGLLRELLTRGQTQMQRALPKAYVIDSAGEIRARGERSYLFDFNPPSPAEIARAQAGEVVVIEDWANNEFRALLKLDAFADYFLYVSRAVDGKILSLLDDTQATVLLYQQLEADRGRLVFEFALIYLGFAVVVILGAIWMGLWFAERLARPVGQLAAAAMRVGAGDLDARVPESRQDDEIALLGRAFNTMTRQVKGQRDALIEANIETERRRRLFDSVLKGVTAGVVGLDGEGRIEVMNAAAATLLGLDPEMSWGQPLRDVERLKSFPGQPPQGSSCPASDRTPRASAAGSRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG64</accession>
    <name>A0A2M9PG64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000077">
        <property type="protein sequence ID" value="PJN96512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9224" checksum="35D24E89481D54D8" modified="2018-04-25" version="1">MAAAASTPQAAQQAAMMAPAGSGGGINFGNISVNAPVTIERGAIPEGVSEERVAQLISQQSEAAAERTLRRAIDGAVRHFTEQEEYNVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB0</accession>
    <name>A0A2M9PGB0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ETF domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01725</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000063">
        <property type="protein sequence ID" value="PJN96571.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014730">
        <property type="entry name" value="ETF_a/b_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001308">
        <property type="entry name" value="ETF_a/FixB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43153">
        <property type="entry name" value="PTHR43153"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01012">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00893">
        <property type="entry name" value="ETF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ETF" evidence="2">
        <location>
            <begin position="3"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96571.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="12913" checksum="F63631F96B9FEC6E" modified="2018-04-25" version="1">MAVLVYAKHDNATLNDATAKTVTAARGLGGEIHLLVAGENAAAVAAEAAALEGVAKVLHAEGAGYGHRLAEPLTELMLGLAPGYDAIVFPGTTTGKNVAPRLAAKLDVMVISEVTAVLGPDTFERPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG0</accession>
    <name>A0A2M9PGG0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Aspartate--tRNA(Asp/Asn) ligase</fullName>
            <ecNumber evidence="7">6.1.1.23</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Aspartyl-tRNA synthetase</fullName>
            <shortName evidence="7">AspRS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">Non-discriminating aspartyl-tRNA synthetase</fullName>
            <shortName evidence="7">ND-AspRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">aspS</name>
        <name evidence="9" type="ORF">CNY89_01380</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP + L-aspartate + tRNA(Asx) = AMP + diphosphate + L-aspartyl-tRNA(Asx)</text>
            <dbReference type="Rhea" id="RHEA:18349"/>
            <dbReference type="Rhea" id="RHEA-COMP:9710"/>
            <dbReference type="Rhea" id="RHEA-COMP:9711"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.23"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="7">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.23" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000047">
        <property type="protein sequence ID" value="PJN96637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004815">
        <property type="term" value="F:aspartate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050560">
        <property type="term" value="F:aspartate-tRNA(Asn) ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006422">
        <property type="term" value="P:aspartyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00044">
        <property type="entry name" value="Asp_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004364">
        <property type="entry name" value="Aa-tRNA-synt_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004524">
        <property type="entry name" value="Asp-tRNA-ligase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002312">
        <property type="entry name" value="Asp/Asn-tRNA-synth_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004115">
        <property type="entry name" value="GAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029351">
        <property type="entry name" value="GAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004365">
        <property type="entry name" value="NA-bd_OB_tRNA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22594:SF5">
        <property type="entry name" value="PTHR22594:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02938">
        <property type="entry name" value="GAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00152">
        <property type="entry name" value="tRNA-synt_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01336">
        <property type="entry name" value="tRNA_anti-codon"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01042">
        <property type="entry name" value="TRNASYNTHASP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55261">
        <property type="entry name" value="SSF55261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00459">
        <property type="entry name" value="aspS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="4 7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 7 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="3 7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="8">
        <location>
            <begin position="144"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="region of interest" description="Aspartate" evidence="7">
        <location>
            <begin position="199"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="175"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="221"/>
            <end position="223"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="454"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="488"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="495"/>
        </location>
        <ligand>
            <name>L-aspartate</name>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <begin position="540"/>
            <end position="543"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Important for tRNA non-discrimination" evidence="7">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006303"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="593" mass="66010" checksum="8B1132CE4F8424F8" modified="2018-04-25" version="1">MHAYRSHTCAALTVGQTGETVRLSGWVHRVRDHGGVLFIDLRDHYGMTQVLADSDSPAFAALEKVRAEWVIRIDGRVKARAPELVNPKIPTGEIEVYVTEVEVLSAAEDLPLPVFGEVDYPEETRLKYRFLDLRRENLHDKIMLRSKVIAHLRDAMRGQGFTEFQTPILTASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPGEFYQLDVEMSFVTQEDVFQAIEPVMRGVFEEFGGGRPVTPEFPRIAYRDSMLWYGSDKPDLRNPIKMQVVSEHFRGSGFKVFASILEQPGTEVRAIPAPGGGSRKFCDRMNAYAQGEGLPGMGYIFWRKGDDGAMEAAGPVAKALGPERTEALRTQLDLGEGDAVFFLGGRPSKFEAVAGKARNVIGKELGLTVEDRFDFAWIVDFPMYERDEDTGKLDFSHNPFSMPQGGLEALATQDPLDVLGYQYDIVCNGVELSSGAVRNHKPEIMYKAFEVVGHDKAFVDEHFGGMLSAFRYGAPPHAGIAPGVDRIVMLLAGAENIREVIMFPMNQRAEDLMMGAPSAPTNEQLRDLGLRLAPKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM2</accession>
    <name>A0A2M9PGM2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01510</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000054">
        <property type="protein sequence ID" value="PJN96614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13416">
        <property type="entry name" value="SBP_bac_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014793125" evidence="4">
        <location>
            <begin position="21"/>
            <end position="423"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="423" mass="45466" checksum="CF4853A5864D6F13" modified="2018-04-25" version="1">MTIIARIGATLLATSCLAGAASAQTDLSLWYHGAGNAVEREILAGIVEDFNASQADWKVSIEQFPQAAYNDSVTAAALSGDLPDILDVDGPIMPNWAWAGYLAPLQIDETLLEGFLPGPIGKWQDKIYSVGLWDAAIAIFARKSILDKYGIRIPTLDAPWTRDEFDAALVKLQEGGEFEQPLNLGMADKGEWYPYAFGPMLASFGGDIVDRTTYQTSEGVLNGEAAIAFGEWWQSLFERGLAAGTSQDPADWQNGFAEGKYALNYTGNWIALPALEKFGDDMLFLPAVEFGAGPKIGAASWQFAVAASSPNQEGANAFIEFALQDKYMAAFSDGMGLIPPTREAAAMSKYYKPGGAMEVFYDLSEKQALLRPVTPGYVVQSRVFQKAVSDIADGADVATALDTAVDEIDADIANNQGYGHTAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH09</accession>
    <name>A0A2M9PH09_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Gln-synt_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00640</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamine synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000019">
        <property type="protein sequence ID" value="PJN96764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="4">
        <location>
            <begin position="1"/>
            <end position="160"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="26486" checksum="F387F2B7F7E30D81" modified="2018-04-25" version="1">MCPIAPKVADPLKAADDALYFKRFVKGIARRYGLAASFMAKPFLDRAGNGFHVHFSLLDKTGANVFDDGTPEGSELMRNAVAGLLDMMRASALVFAPHRNSFRRLQPNAHAPTEVCWGYETRHAAIRIPGGPNPARRIEHRVAGADANPYLVLAAILGAALEGIEAGLRPPMPMMPVMDPSAGATLPQDWKRAIEAFEGTERLGRIFAPVLRSGFAGMKKQELQVFSQQISPFEHETYMETV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH10</accession>
    <name>A0A2M9PH10_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00310</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000008">
        <property type="protein sequence ID" value="PJN96826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="408" mass="42228" checksum="0C036DAB3AF316AF" modified="2018-04-25" version="1">MPIEPAIEPTEWGFLDSLIGVGEFITKNADGEIVGVPRILMAAPTIYDVVFCGLDFAPGSASAMERWRSQKRTEALVAGVANFSWPSPLTGQENRSSIVQFTAGLGVATVGIAVPLITDAAILNAGPKNHILRLQVVNNSLPTLPMGLAAPATGNMPLRYLPGVTALSVPHGQIGEFEIETEGNTVGYVRSARILGDTVPPTTLMIDSARGSGLPITQLASNVFAPSMVDGEAMLLIHGRITGTGATLPPDRGWAYPTDADLNGVGGILNGTVSALRVAVSTTRPGGAGVVDGTNTMSNQQFLHASAWRGCLPTDYKTALSTGTTVVFASFSEVAPGGFVIYAVLVNSSTSVSPEGGVGIDTAPVAQSGWNFRVVRVEPDEDGNVAPPNVTLGGAAACLIVAIRMEPN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH32</accession>
    <name>A0A2M9PH32_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Ribosome maturation factor RimP</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rimP</name>
        <name evidence="7" type="ORF">CNY89_00270</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Required for maturation of 30S ribosomal subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the RimP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042274">
        <property type="term" value="P:ribosomal small subunit biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01734">
        <property type="entry name" value="YlxS_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01077">
        <property type="entry name" value="RimP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003728">
        <property type="entry name" value="Ribosome_maturation_RimP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028998">
        <property type="entry name" value="RimP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036847">
        <property type="entry name" value="RimP_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028989">
        <property type="entry name" value="RimP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035956">
        <property type="entry name" value="RimP_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33867">
        <property type="entry name" value="PTHR33867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02576">
        <property type="entry name" value="DUF150"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17384">
        <property type="entry name" value="DUF150_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF74942">
        <property type="entry name" value="SSF74942"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75420">
        <property type="entry name" value="SSF75420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0690">Ribosome biogenesis</keyword>
    <feature type="domain" description="DUF150" evidence="5">
        <location>
            <begin position="17"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="domain" description="DUF150_C" evidence="6">
        <location>
            <begin position="92"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="178"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022517"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF17384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="24761" checksum="EE3EAF3ABDD050D2" modified="2018-04-25" version="1">MADLIAKAAIDRRLASIVQPTIQGLGYELVRLRLMGGKRNTLQIMAERPEGWIEVDDCAKISRAVSAVLDVEDPIGGEYTLEVSSPGIDRPLTRLKDFDRYTGYEVRLETSEMIDGRKRFRGVLGGVEDGEVLLEIPEGTIGLSFDLVSDAKLILTDELIAESLAGRQAQGFDQADFDESAFDEIETEETGADETETDEIETDEIETDGAAPEEDGDDEEKEEAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C2</accession>
    <name>A0A2M9P4C2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004752">
        <property type="protein sequence ID" value="PJN92368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7137" checksum="91889F1106FDE3ED" modified="2018-04-25" version="1" fragment="single">PSALPAITVTEIRPAHLVQRVHASGMIVAVEEGAAVAPSALPAITVTEIRPAHLVQRVHASGMIVAVEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G0</accession>
    <name>A0A2M9P4G0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004568">
        <property type="protein sequence ID" value="PJN92427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="16"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7054" checksum="286783C34B3E538F" modified="2018-04-25" version="1" fragment="single">MLHVTYDKSDRLLTEEEIGDEKRDQPRGGGSNIALRKRYAKLRGMTDEEAKAVTNKMVAADSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G3</accession>
    <name>A0A2M9P4G3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004616">
        <property type="protein sequence ID" value="PJN92415.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92415.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7806" checksum="3DFFC0DD3F86ED80" modified="2018-04-25" version="1" fragment="single">SYAISLDGKGERSFSLLARGLGGADLFRPAEVVTFERLRDSYAISLDGKGERSFSLLARGLGGADLFRPAEVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I4</accession>
    <name>A0A2M9P4I4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">TraG/TraD family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004483">
        <property type="protein sequence ID" value="PJN92452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7749" checksum="71BBC8C9E4FEE59A" modified="2018-04-25" version="1" fragment="single">VGGGKSSGLVVPTLLTLTDGSVVVADPSSELAAMTARHRATLGTVIFLNPFGSVFTQETGMAFPDTGFNPLSILDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I7</accession>
    <name>A0A2M9P4I7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004539">
        <property type="protein sequence ID" value="PJN92435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8373" checksum="76FF6D98133211A0" modified="2018-04-25" version="1" fragment="single">AVTIRSRMQRDLGQLALDMEGVGDPDALDRTWAMETDRLDREAVTIRSRMQRDLGQLALDMEGVGDPDALDRTW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4K8</accession>
    <name>A0A2M9P4K8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004409">
        <property type="protein sequence ID" value="PJN92476.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92476.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7127" checksum="52269B458C5FB71D" modified="2018-04-25" version="1" fragment="single">MDNETSIDRNELLALTAEIVSAYVGNNALDTGTVPDMIGAVFAKLTEISNDEKPLPATLTPAVPIKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M5</accession>
    <name>A0A2M9P4M5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004415">
        <property type="protein sequence ID" value="PJN92473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="10"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8038" checksum="AFA75E787FAF1832" modified="2018-04-25" version="1" fragment="single">EKLRFSPAKAGAVSTSSTPSASSKTSSASSARQHAGARVDREALRREAQVLAGEGGGGLDQLHALGLVEDLLRQLRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P568</accession>
    <name>A0A2M9P568_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003834">
        <property type="protein sequence ID" value="PJN92663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5569" checksum="46202236DC4802A4" modified="2018-04-25" version="1" fragment="single">FHDTVEALQADLDPWLVHYNTERPHLGYRNMGRWPIETVRSFVSQEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P569</accession>
    <name>A0A2M9P569_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">MobA_MobL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MobA/MobL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003759">
        <property type="protein sequence ID" value="PJN92687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005053">
        <property type="entry name" value="MobA_MobL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03389">
        <property type="entry name" value="MobA_MobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0184">Conjugation</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobA_MobL" evidence="3">
        <location>
            <begin position="58"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10730" checksum="14D641703EB3F1B5" modified="2018-04-25" version="1" fragment="single">IPWGVSAGEESWKATVSAASIRLETERMNGLRDIRAMARWNSRSARAKLSRLWPASSIRAARWNAAEAAEKRKDGRTAREFEIALPHELTAEQRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P585</accession>
    <name>A0A2M9P585_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">50S ribosomal protein L10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplJ</name>
        <name evidence="5" type="ORF">CNY89_27370</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the universal ribosomal protein uL10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003707">
        <property type="protein sequence ID" value="PJN92706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043141">
        <property type="entry name" value="Ribosomal_L10-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002363">
        <property type="entry name" value="Ribosomal_L10_eubac_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001790">
        <property type="entry name" value="Ribosomal_L10P"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00466">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160369">
        <property type="entry name" value="SSF160369"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01109">
        <property type="entry name" value="RIBOSOMAL_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN92706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8880" checksum="69E14A542F4C99EA" modified="2018-04-25" version="1" fragment="single">MDRAQKEVVVGELGQIFADVWRRVVAHYEGLTVAEMTDFRLRLKQAGGGVRVAKNKLAKIALKGTPAERMGDLLKGMTVLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D2</accession>
    <name>A0A2M9P5D2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF4411 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003558">
        <property type="protein sequence ID" value="PJN92761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016541">
        <property type="entry name" value="UCP008505"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14367">
        <property type="entry name" value="DUF4411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11338" checksum="3A96D0CCA046C2B4" modified="2018-04-25" version="1" fragment="single">MLASIEVLHELKKKDDDVYGWAKDRKESLFVEIDAGCRPRSCGSCRPTQSLWTPGKESQEAIPFVIAQALAHNPRLVIVTQEAGGSADNPKFPRCLRQHHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J7</accession>
    <name>A0A2M9P5J7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003454">
        <property type="protein sequence ID" value="PJN92793.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92793.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="5071" checksum="54096E92A617EA94" modified="2018-04-25" version="1" fragment="single">MTTDRSPLLPDRHPQRDLFVCDIVDAVPKGDMSSMEHPVFSLSTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K7</accession>
    <name>A0A2M9P5K7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003424">
        <property type="protein sequence ID" value="PJN92803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="37"/>
            <end position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6907" checksum="C1672FD8264736EB" modified="2018-04-25" version="1">MALRYETEFASDTVEALEVILNQFAFAGGRVIHISWQPERRGDGPGGRSQAGYTVAAEYDDDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N1</accession>
    <name>A0A2M9P5N1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26115</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003330">
        <property type="protein sequence ID" value="PJN92833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12251" checksum="06142522E399151F" modified="2018-04-25" version="1" fragment="single">GTLGALPAFYFRQEHYLNLSRRTQADYRKVANFLAPIADTPLHLIDTPLIAGIHDKAAKKIGWRQANMLRTFLSEVFRFAVPAGLIDANYAEAVIPKPRPKGRPRANRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B2</accession>
    <name>A0A2M9P6B2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">L-asparaginase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002701">
        <property type="protein sequence ID" value="PJN93072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004067">
        <property type="term" value="F:asparaginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036152">
        <property type="entry name" value="Asp/glu_Ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006034">
        <property type="entry name" value="Asparaginase/glutaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027474">
        <property type="entry name" value="L-asparaginase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037152">
        <property type="entry name" value="L-asparaginase_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00710">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001220">
        <property type="entry name" value="L-ASNase_gatD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00870">
        <property type="entry name" value="Asparaginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53774">
        <property type="entry name" value="SSF53774"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51732">
        <property type="entry name" value="ASN_GLN_ASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Asparaginase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00710"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="13703" checksum="404CDAA292C4D562" modified="2018-04-25" version="1" fragment="single">EKPVVMVAAMRPSTAISADGPLNLLNAVTVAASPEAAGKGVLLVMNDTIQSGRDVTKRVNVVPSAFQSQWGPLGMIVEGKAHYFRAPVKRHGLGSEFDIDTIDALPLVTIAYGSGNMIPQVFDAMAAAGAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D7</accession>
    <name>A0A2M9P6D7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein ParA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002520">
        <property type="protein sequence ID" value="PJN93134.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="10"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93134.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7431" checksum="9E22B13B3C91F2A7" modified="2018-04-25" version="1" fragment="single">MECLRPKPHVLAIANQKGGVGKTTTAINLGTALAASGHKVLLVDFDPQGNASTGLGINAHARRFTAYDLLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I2</accession>
    <name>A0A2M9P6I2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002538">
        <property type="protein sequence ID" value="PJN93128.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008579">
        <property type="entry name" value="UGlyAH_Cupin_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05899">
        <property type="entry name" value="Cupin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_3" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93128.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="4950" checksum="B358A15334FFBCD5" modified="2018-04-25" version="1" fragment="single">LEGRVRLEGEGGAVEFGPGEAFVVEGGFAGTWESIGRVVKLYAILEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K9</accession>
    <name>A0A2M9P6K9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002478">
        <property type="protein sequence ID" value="PJN93150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="23"/>
            <end position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9167" checksum="C548DA7BA8C94B5C" modified="2018-04-25" version="1">MIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQLSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L7</accession>
    <name>A0A2M9P6L7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">LPS export ABC transporter permease LptG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_23110</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002448">
        <property type="protein sequence ID" value="PJN93160.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005495">
        <property type="entry name" value="LptG/LptF_permease"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33529">
        <property type="entry name" value="PTHR33529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03739">
        <property type="entry name" value="LptF_LptG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="14"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="61"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93160.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11351" checksum="4FC27DA488E1E409" modified="2018-04-25" version="1" fragment="single">MTLSQNALSSFSTCFLKSLVAVQTVIAIVVLLAAGVENLRRFSEASAREVAAVTLLQAPEVLYQAFPLVLMLSSLVTFLRLARASELVVMRAAGVSALRLIAVPGFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T3</accession>
    <name>A0A2M9P6T3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">MobA_MobL domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_22335</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the MobA/MobL family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002263">
        <property type="protein sequence ID" value="PJN93252.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005053">
        <property type="entry name" value="MobA_MobL"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03389">
        <property type="entry name" value="MobA_MobL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0184">Conjugation</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MobA_MobL" evidence="3">
        <location>
            <begin position="32"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010873"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93252.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7817" checksum="BEA4364CF64029EA" modified="2018-04-25" version="1" fragment="single">MNGLRDIRAMARWNSRSARAKLSRLWPASSIRAARWNAAEAAEKRKDGRTAREFEIALPHELTAEQRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P739</accession>
    <name>A0A2M9P739_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002093">
        <property type="protein sequence ID" value="PJN93330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="85"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17408" checksum="9EAE4D1C5A512DFD" modified="2018-04-25" version="1" fragment="single">QVLSALGLGLILFAIFAFDEKTPFPSLYALVPVGGAALVLMFCGPVTWTGRLLATPPMVGIGLLSYSAYLWHQPLFAFARIRGEIHPSTALILALAAASLGLAYLSWRFVEQPFRRSRGRLLPSQAAVFGASGAAIGLFMAFGLYGYVSGGMPARFGANPIRTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P797</accession>
    <name>A0A2M9P797_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001988">
        <property type="protein sequence ID" value="PJN93385.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93385.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7259" checksum="8C630E33C2A8B4E1" modified="2018-04-25" version="1">MDVDADDTSHPRLPHSHDDGSGGGDTTPTDEMDKRNLGFSVILTLRSDLVAKRGASAASVAGPPMDALPD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J9</accession>
    <name>A0A2M9P7J9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001832">
        <property type="protein sequence ID" value="PJN93488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006881">
        <property type="entry name" value="RepA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04796">
        <property type="entry name" value="RepA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="17378" checksum="2F8A41A9828FBC83" modified="2018-04-25" version="1" fragment="single">MIDDQRKGKGRKKQVAGTFRQVGSGVLLPIPKRNTIIRDRLIETAATLSETRPEVTFQHSILCQTSLPYRSPGANVREWERRQGNAALLIEAGRARNPETGEWVQLALPWGPKARLVLMHLNQEAIRTQSNVIDVGASLSGFVKRLGLDGNGRDMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q2</accession>
    <name>A0A2M9P7Q2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001684">
        <property type="protein sequence ID" value="PJN93586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11058" checksum="D6EDD158630269D8" modified="2018-04-25" version="1">MGLPGENQGTSGPEAGAEFLKELGYKKGTKTYNRLLNEHTWVNGISSPQTGEWFTDPLAYAGRVAERALQAASRTISNIYSIPACKVAAADLMTDDYVPPIPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W1</accession>
    <name>A0A2M9P7W1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19440</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001621">
        <property type="protein sequence ID" value="PJN93634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="15"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6783" checksum="650FD87BBE02CAA1" modified="2018-04-25" version="1" fragment="single">GNLTFQLNSVLTNDLLLAIPLFTFMGTILERSGAVRRAPRRGGQRRCARCRRSDHAGELGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X4</accession>
    <name>A0A2M9P7X4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">TVP38/TMEM64 family membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19405</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TVP38/TMEM64 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001616">
        <property type="protein sequence ID" value="PJN93637.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015414">
        <property type="entry name" value="TMEM64"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12677">
        <property type="entry name" value="PTHR12677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="54"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU366058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93637.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="14064" checksum="A3D5C89B3A8D550D" modified="2018-04-25" version="1" fragment="single">MSLRAAILTGLAILGIGLLAVWQFAPSVFAEARSLLDVERLEMLVARAGLWGPVLIVTLMTLAVVASPIPSAPIALAAGAAYGHLWGTVQVVIGAELGALIAFGLARVLGHDVLRRAFGDRVDAGLLGSQTALTATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z9</accession>
    <name>A0A2M9P7Z9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Carbamoyl phosphate synthase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19335</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 ATP + H2O + hydrogencarbonate + L-glutamine = 2 ADP + carbamoyl phosphate + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:18633"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58228"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.5"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001601">
        <property type="protein sequence ID" value="PJN93649.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006807">
        <property type="term" value="P:nitrogen compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005483">
        <property type="entry name" value="CbamoylP_synth_lsu_CPSase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00098">
        <property type="entry name" value="CPSASE"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="3">
        <location>
            <begin position="37"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93649.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="23434" checksum="15BC74BC9C922479" modified="2018-04-25" version="1" fragment="single">VVRDKADNCIIVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVQPETGRLIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITQVTPASFEPTIDYVVTKIPRFAFEKFPGAEPTLTTAMKSVGEAMAIGRTFHESVQKALCSLETGLTGFDEIEIPGAPDPQAILRALSERTPDRLRLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P827</accession>
    <name>A0A2M9P827_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001589">
        <property type="protein sequence ID" value="PJN93660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="62"/>
            <end position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8907" checksum="4ED70D06320A3080" modified="2018-04-25" version="1">MIDFTAWSHPVLAVACSSCGRKAGALCRRPSGHKAADFHARRKAEADRHFIDRHGADASIERTGDGWRIDPQGRLRKGEAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P864</accession>
    <name>A0A2M9P864_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18910</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001527">
        <property type="protein sequence ID" value="PJN93713.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015006660" evidence="1">
        <location>
            <begin position="28"/>
            <end position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93713.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="18639" checksum="DD4A028AB2715C39" modified="2018-04-25" version="1">MKPLLMLAVVGTSMLAGTAGFSQDASAEDLLETLKGVAPADLLQNATLVQVSADGMKTVREGENGWTCMKPGTNPMCADAGGLEWMHALMSKGETPHKLGFIYMLLGDGGASNIDPFAAEETPDNNWIVSGPHVMIVGTEAKSLLEGYPRAAVADPAKPYVMWAGTPYEHLMLSMQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E1</accession>
    <name>A0A2M9P8E1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001441">
        <property type="protein sequence ID" value="PJN93801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13401">
        <property type="entry name" value="AAA_22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="48"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13401"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="255" mass="28157" checksum="C311D237A44E02FB" modified="2018-04-25" version="1" fragment="single">MSSGLTIYNAHFGLSERPFTLLPDPDFLYWSDNHARAYAMLEYGMLTHAPITVITGEIGAGKTTLLRQMLRTLPSDVSVGLVSNAQGDRGELLHWVLMALDVPTEAGAGYVQLFARFQDHLIGQYAAGRRTMLIFDEAQNLSVEALEELRMFSNINADKDELLQLVLVGQPELRDLIASPRLVQFAQRVAADYHLPAMSPLAVGDYVRHRLRVAGATREIFTPAACEVVHAAARGVPRLVNQLCDYALVYAFTDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8H4</accession>
    <name>A0A2M9P8H4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001417">
        <property type="protein sequence ID" value="PJN93828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6399" checksum="FE88E54847A88DAD" modified="2018-04-25" version="1" fragment="single">RLDAEGDFEIATGALVDTPEGKRPETVSARALLDELEDQQDLAEVISACTLGGQAGGRRDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S5</accession>
    <name>A0A2M9P8S5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YaiI/YqxD family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0178 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001321">
        <property type="protein sequence ID" value="PJN93942.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003791">
        <property type="entry name" value="UPF0178"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35146">
        <property type="entry name" value="PTHR35146"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02639">
        <property type="entry name" value="DUF188"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93942.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8886" checksum="A94516C58A296489" modified="2018-04-25" version="1" fragment="single">CVTSDVPLAARCVGAGARALKPNGEAFTGANIGTVLAMRDLMADLRAADPFRQGGGKPFGKADRSRFLDALEREVRAAARERRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V2</accession>
    <name>A0A2M9P8V2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001307">
        <property type="protein sequence ID" value="PJN93958.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93958.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11205" checksum="57496519E0B7738A" modified="2018-04-25" version="1">MLRPTSASIRPVSLTTCAACWRTPGSASSSGEHCPPSWLKALIRVGPAAAMRRPWAIMPPSSLSGSSSVLASALIGKPSGKGPISTPPSGVTAQGATRLSSQVQRLIAAGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z1</accession>
    <name>A0A2M9P8Z1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tn3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001276">
        <property type="protein sequence ID" value="PJN94003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025296">
        <property type="entry name" value="DUF4158"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13700">
        <property type="entry name" value="DUF4158"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF4158" evidence="1">
        <location>
            <begin position="6"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="166"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18282" checksum="1B7499D55C23E33B" modified="2018-04-25" version="1" fragment="single">MPRRALLTPAQREALMAVPTDEATLARHWVLGDAELRAIAGRRRPHNRLGFAIQLCALRYPGRLLRPGELIPPAALAFLGGQLAIEAEALARFAARGPTRYEQLGTLRDLFGFAPLSRPDRAVLQVWLLPIALTTTSGANVAHALIAEFRRRRIIIPGISIIERMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P947</accession>
    <name>A0A2M9P947_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidyl-prolyl cis-trans isomerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001236">
        <property type="protein sequence ID" value="PJN94055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0413">Isomerase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="16323" checksum="F741EEFEE4CADFEC" modified="2018-04-25" version="1" fragment="single">MLRQMLREPLVHFVVAGGILFGAWSWVGPKEETGSGDDVIVLDQARLDHLETLWRAQWKRDPAPEDVAAIVDRHLRQEVFYREALRMELDRDDEIVRTRLAQKMEAVASDLGALMRPPTEDDLRTFSREAGRSLHPAAGLRLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P987</accession>
    <name>A0A2M9P987_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Pantoate--beta-alanine ligase (AMP-forming)</fullName>
            <ecNumber evidence="4">6.3.2.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16555</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(R)-pantoate + ATP + beta-alanine = (R)-pantothenate + AMP + diphosphate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:10912"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15980"/>
            <dbReference type="ChEBI" id="CHEBI:29032"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57966"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.3.2.1"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; (R)-pantothenate biosynthesis; (R)-pantothenate from (R)-pantoate and beta-alanine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the pantothenate synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.1" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01001208">
        <property type="protein sequence ID" value="PJN94095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00028">
        <property type="reaction ID" value="UER00005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004592">
        <property type="term" value="F:pantoate-beta-alanine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015940">
        <property type="term" value="P:pantothenate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003721">
        <property type="entry name" value="Pantoate_ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042176">
        <property type="entry name" value="Pantoate_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21299:SF1">
        <property type="entry name" value="PTHR21299:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02569">
        <property type="entry name" value="Pantoate_ligase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0566">Pantothenate biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004990"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009256"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012219"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="17883" checksum="9C473DE9DBADE432" modified="2018-04-25" version="1" fragment="single">MTSVTGLSGNAQASAGVAASRMAKAARRVKDAGMVVLPWFAPSMAEGGRTSDAAKLAPLGAHLLYAPGVEEMYPPGFATTISVTGVTAGLCGAHRPGHFDGVATVVAKLLLQTDADLALFGEKDFQQLQVVRRLARDLDLRTTILGRPVVRETDGLALSSRNQRLSPEER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E4</accession>
    <name>A0A2M9P9E4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">PepSY domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001158">
        <property type="protein sequence ID" value="PJN94164.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005625">
        <property type="entry name" value="PepSY-ass_TM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34219">
        <property type="entry name" value="PTHR34219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03929">
        <property type="entry name" value="PepSY_TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="158"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="206"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94164.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="30604" checksum="A2A39792D88DD8FB" modified="2018-04-25" version="1" fragment="single">MPDLSQSQMKRLTAIHGWSAVILGLLLYAVIVTGAVAVFAEEIGRWSAGTLRTLPAMEGPVDARIRALAEQVAPEHREDVSAWNAEGGDMHVFFHTHRLNPETGLDEDFGTIFRVGPAGEAIERHDGFVWQDPRNYDVSALRRFLVDLHVQLYLPDPWGLLLTGVLGLMMMAAVVSGLLMHRHIIRDLFVAERPGKRLVSARDRHVLAASWGLPFAFVLAFTGSFFSFASTIGFPLVAAVAFGGDQEAMGETLFEPPVPEDARRVPQANLDRLLADSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K1</accession>
    <name>A0A2M9P9K1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Erythromycin biosynthesis sensory transduction protein eryC1</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15890</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001127">
        <property type="protein sequence ID" value="PJN94205.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000653">
        <property type="entry name" value="DegT/StrS_aminotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01041">
        <property type="entry name" value="DegT_DnrJ_EryC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94205.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8256" checksum="EDDE52B3BE47FEEC" modified="2018-04-25" version="1" fragment="single">DALRRAGVATGVHYPTPVHLQPAYARLGHRPGAFPISEALARETLSLPLYPELGKEEAMRVIQAVNRLGARVGAQTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y6</accession>
    <name>A0A2M9P9Y6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminopyrimidine aminohydrolase</fullName>
            <ecNumber evidence="1">3.5.99.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">tenA</name>
        <name evidence="3" type="ORF">CNY89_15155</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>4-amino-5-aminomethyl-2-methylpyrimidine + H2O = 4-amino-5-hydroxymethyl-2-methylpyrimidine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:31799"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:63416"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + thiamine = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole + H(+)</text>
            <dbReference type="Rhea" id="RHEA:17509"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:17957"/>
            <dbReference type="ChEBI" id="CHEBI:18385"/>
            <dbReference type="EC" id="3.5.99.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; thiamine diphosphate biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the TenA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.99.2" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01001043">
        <property type="protein sequence ID" value="PJN94331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050334">
        <property type="term" value="F:thiaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016084">
        <property type="entry name" value="Haem_Oase-like_multi-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004305">
        <property type="entry name" value="Thiaminase-2/PQQC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027574">
        <property type="entry name" value="Thiaminase_II"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03070">
        <property type="entry name" value="TENA_THI-4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48613">
        <property type="entry name" value="SSF48613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR04306">
        <property type="entry name" value="salvage_TenA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0784">Thiamine biosynthesis</keyword>
    <feature type="domain" description="TENA_THI-4" evidence="2">
        <location>
            <begin position="16"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU363093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03070"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="219" mass="23722" checksum="7C84CAEC6ED0638B" modified="2018-04-25" version="1">MRAAIASIGAIRSWLARSYVRHPFVTGLGDGTLPKASFLHYLAQDYVFLIHFARAWALAVVKAGTLDEMRAASATVEALVNGEMSLHQRICAEAGIADLEATVEAPANLAYTRYVLEAGYSGDLLDLLAALAPCVLGYGEIGARLLAEAGDTPYRDWIETYGGEDYQEVCRSVGALIDGALARRLGEAPDGLPRWATLQDRFTTATRLEAEFWAMGLRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z7</accession>
    <name>A0A2M9P9Z7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15000</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the BI1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001029">
        <property type="protein sequence ID" value="PJN94357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006214">
        <property type="entry name" value="Bax_inhibitor_1-related"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23291">
        <property type="entry name" value="PTHR23291"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01027">
        <property type="entry name" value="Bax1-I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="116"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="142"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="170"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="209"/>
            <end position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="25618" checksum="31F58204C47FDD7D" modified="2018-04-25" version="1">MSTPRPAFGYGQATSATIDAGLRAHMLRVYNYMGLGLVVTGLVAMIVASTPALYVPIFSTPLKWVVMLAPLGFVLFFSFRLEAMSSATAQLLFWAFCAVMGLSLASVFLVFTGTSIARTFFIAAGMFGATSLYGYTTKRDLANFGGFMIMGLIGVIIASVVNIFLASSALQFAISVIGILVFVGLTAWDTQNIRQQYLDHMDDEVRSKLAVFGALSLYLNFVNIFQLLLAFTGERE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA24</accession>
    <name>A0A2M9PA24_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001016">
        <property type="protein sequence ID" value="PJN94379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9484" checksum="4E4A43B4287ED612" modified="2018-04-25" version="1">MTIYLVASRMRLLPWLALGPNRAIRKPYSLVRSCRLVLLAPRAPLPTFDLGTLLTLEIDLIGCGAPEADDYETALALLAFRDVATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA32</accession>
    <name>A0A2M9PA32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001011">
        <property type="protein sequence ID" value="PJN94389.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="132"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94389.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16674" checksum="7166900944E41285" modified="2018-04-25" version="1" fragment="single">MGLVQRMERRLEQLGHLVLPRGLATAAGDRLDVLINNAGTVEVGPLAGQEDAAISRLIETNLTAPILVTRDLLPAIRRAQGRVVNVGSVFGDIAYPYFAAYSASKFGLRGFPTRCAASGREKLDMGRTWRNESARSAESGRPYRGTIKTRFDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA79</accession>
    <name>A0A2M9PA79_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14400</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000965">
        <property type="protein sequence ID" value="PJN94455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00507">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNHc" evidence="2">
        <location>
            <begin position="37"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="96"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14950" checksum="848EB9D5C57954A8" modified="2018-04-25" version="1">MARYRNLPDRYAAPPPRYVPPPKKAEDFYQSKEWRRLVARLKRERGAWCQRCGSTHRVTGDHIQELKDGGAPLDPANVELLCQACHNTKTAKARARRVGLAQAGSHGARRLQGVTDQGTAQPRGGGRKSPRSPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA85</accession>
    <name>A0A2M9PA85_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14435</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000969">
        <property type="protein sequence ID" value="PJN94450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="52"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="108"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15576" checksum="5B32744764AE35C4" modified="2018-04-25" version="1">MDNETSIDRNELLALTAEIVSAYVGNNALDTGTVPDMIGAVFAKLTEISNDRPVRRRPAPASGAGQGARGAWRTPGDDRLECRDAPGACPVRPRSCDRLGEILPETCRPMSAPKNVVPPQGLAGFRPSAQFCGPRQNAGPAPRDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA87</accession>
    <name>A0A2M9PA87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000976">
        <property type="protein sequence ID" value="PJN94439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4542" checksum="D20F0CC59863A766" modified="2018-04-25" version="1" fragment="single">RDRGAVTLALAVAEANAPARALYDRLGMAEAARYHYRIAPEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAG6</accession>
    <name>A0A2M9PAG6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000918">
        <property type="protein sequence ID" value="PJN94540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9382" checksum="631BE683422AB84E" modified="2018-04-25" version="1" fragment="single">LGGSVQFFVYDVVKIFILLSTLIFAISWVQSYFGARWKAASPASVAKIRSKTPIRLQRTKRLWSVFGGPWTAGASRHIGPPRMT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH9</accession>
    <name>A0A2M9PAH9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Arsenical-resistance protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">arsB</name>
        <name evidence="5" type="ORF">CNY89_13885</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cell membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 3">Belongs to the arsenical resistance-3 (ACR3) (TC 2.A.59) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000916">
        <property type="protein sequence ID" value="PJN94546.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015103">
        <property type="term" value="F:inorganic anion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004706">
        <property type="entry name" value="Arsenical-R_Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002657">
        <property type="entry name" value="BilAc:Na_symport/Acr3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43057">
        <property type="entry name" value="PTHR43057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01758">
        <property type="entry name" value="SBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005508">
        <property type="entry name" value="Acr3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00832">
        <property type="entry name" value="acr3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 4" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="16"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="83"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="113"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="186"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="226"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="256"/>
            <end position="281"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRNR" id="PIRNR005508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94546.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="357" mass="38598" checksum="444D72F16A86651A" modified="2018-04-25" version="1">MSAPRPASRLSFLDRYLTVWIFAAMALGVLLGAVVPGLPAALDALSVGTTNVPIAVGLILMMYPPLARVRYEELHLVFEDRRVLALSLLQNWIIGPVLMFALAVIFLRDQPEYMTGLILIGLARCIAMVLVWNQLARGDGQYVAGLVAFNAIFQILFFSVYAWFFLSVLPPLFGLEGSVIDVGVGTIAQAVLIYLGLPFLAGYLTRRILIARRGPAWYEAVFLPRIGPVTLAALLLTIVAMFSLKGGEVLRLPLDALRIAVPLAIYFVVQFLVSFAMGWLIRADYPRTTAIAFTAAGNNFELAIAVAIAAYGLASPVAFATVIGPLVEVPVLILLVQVALRLGTRWFPATAPLATSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL3</accession>
    <name>A0A2M9PAL3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sorbosone dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13645</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000890">
        <property type="protein sequence ID" value="PJN94585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012938">
        <property type="entry name" value="Glc/Sorbosone_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011041">
        <property type="entry name" value="Quinoprot_gluc/sorb_DH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07995">
        <property type="entry name" value="GSDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50952">
        <property type="entry name" value="SSF50952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GSDH" evidence="2">
        <location>
            <begin position="196"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="14"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="445"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="445" mass="47484" checksum="6348BC7F1C139142" modified="2018-04-25" version="1" fragment="single">MLMGVALLALAGCDDGPDADGRRAPRARRCDDGPDDGFDVSRQIGPDPVLPEPQIPLIADVKVAEVVGWREGETPDVPEGLAISAYATDLANPRTVHTLPNGDVLVVQSKAPPGKPVARPKDLIRGWIMSLASGDAGGRETNLITLLRDPDRDGAVDARVDLLTGLNSPFGLAWTDDTLYVAEADAVVAYPYALGQTEIAGEPRVLTPLPGGPINHHWTKDLALSPDGRFLYASVGSNSNAAEWGMEAEKGRAAIWEIDRETGAARIYASGLRNPNGLTFHPETGALFTVVNERDELGPNLVPDYMTSVRDGAFYGWPWSYYGDHVDARVHPPRPDMAAKAIAPDYALSSHVAALGMTFTHRAAMPQAYASGAFVGNRGSWNRDRFNGYKVIYVPFEDGAPAGMAQDVVTGFLNGEQARGRPVGLGIDGTGALLIADDAGNTVWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS3</accession>
    <name>A0A2M9PAS3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Kynureninase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000858">
        <property type="protein sequence ID" value="PJN94636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030429">
        <property type="term" value="F:kynureninase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006569">
        <property type="term" value="P:tryptophan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010111">
        <property type="entry name" value="Kynureninase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR14084">
        <property type="entry name" value="PTHR14084"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="21246" checksum="DB141B38E170890D" modified="2018-04-25" version="1" fragment="single">MSDDAFWAKALAEAERADAADPLGGARERFHLPRGTIYLDGNSLGPAPRASLDALRQAAEVEWAEGLIGSWNAAGWFDLPTACGDLIAPIIGAEAGEIVVCDTTSVNIFKTLHAALAMRPDRGVILAEASSFPTDLYIAEGALATRPGARLRLEGVDGPDLEEMIDAEVAVVLVNQVDYRTGRKRDLAALTRRAHAAGALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT1</accession>
    <name>A0A2M9PAT1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-oxoacyl-ACP reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000850">
        <property type="protein sequence ID" value="PJN94648.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94648.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="209" mass="22483" checksum="9970FBE306C94FD9" modified="2018-04-25" version="1" fragment="single">ARDALMARGWSAEAHSLDVTRPADVTALADRLIAAHGRVDVLVANAGIARSGTPAEHVEDELWLDVNDVNYNGVFWCDRAFGRHMLAAGRGAIVNIGSMSGFVVNRPQKQSYYNASKAAVHHLTASLAAEWADRGVRVNAVAPTYIETDMVRRVAAMEPEMVGAWLRDTPMGRMGQPDEVASVVHFLACDASSLMTGTTVTADAGFTCW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT5</accession>
    <name>A0A2M9PAT5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000862">
        <property type="protein sequence ID" value="PJN94632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014883580" evidence="1">
        <location>
            <begin position="18"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9042" checksum="90468BCBD58E0680" modified="2018-04-25" version="1" fragment="single">MRLLLPALLLATAPAFADDLPPAIAAYGAEASAQCKEMGGVPKIGPAFATAVDLTGEGVPAIAAYGAEASAQCKEMGGVPKIGPAFATAVDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU9</accession>
    <name>A0A2M9PAU9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Serine--tRNA ligase</fullName>
            <ecNumber evidence="2">6.1.1.11</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Seryl-tRNA synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_13145</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + L-serine + tRNA(Sec) = AMP + diphosphate + H(+) + L-seryl-tRNA(Sec)</text>
            <dbReference type="Rhea" id="RHEA:42580"/>
            <dbReference type="Rhea" id="RHEA-COMP:9742"/>
            <dbReference type="Rhea" id="RHEA-COMP:10128"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78533"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.11"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.11" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000840">
        <property type="protein sequence ID" value="PJN94664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004828">
        <property type="term" value="F:serine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006434">
        <property type="term" value="P:seryl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00770">
        <property type="entry name" value="SerRS_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002314">
        <property type="entry name" value="aa-tRNA-synt_IIb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006195">
        <property type="entry name" value="aa-tRNA-synth_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002317">
        <property type="entry name" value="Ser-tRNA-ligase_type_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033729">
        <property type="entry name" value="SerRS_core"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43697">
        <property type="entry name" value="PTHR43697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00587">
        <property type="entry name" value="tRNA-synt_2b"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00981">
        <property type="entry name" value="TRNASYNTHSER"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00414">
        <property type="entry name" value="serS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50862">
        <property type="entry name" value="AA_TRNA_LIGASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AA_TRNA_LIGASE_II" evidence="10">
        <location>
            <begin position="54"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00031113"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="311" mass="34114" checksum="7CD5AFBBA84513FF" modified="2018-04-25" version="1" fragment="single">ADNVEIRRWGTPRDFDFAPREHFEIGAALPLLDFEAAAKLSGARFVVLRGAMARLHRALAQFMIDTHVDENGLAETWTPVLVRDESMLGTGQLPKFAEDSYRTENGWWLVPTAEVTLTNLVAGEILPDAALPRRHVAWTQCFRSEAGSAGKDTRGMLRQHQFEKVEMVSIVRPEDGPAEHDRMTRCAEGILEALGLPYRTIVLCTGDMGFGAVRTHDLEVWLPGQGTYREVSSVSLCGEFQARRMNARFRRGEGEKPEFVATLNGSGLAVGRTLIAVLENGQQADGSVDLPAALAPYLRGATRITAEGALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB03</accession>
    <name>A0A2M9PB03_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_12860</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000815">
        <property type="protein sequence ID" value="PJN94711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="191"/>
            <end position="214"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="17"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="25365" checksum="80FB6939EB12F69E" modified="2018-04-25" version="1">MRIDLILANWQMFASGVWMTLQLTFLPLALGFLIALPAGLARARAAPFWSGAINAYVYLFRGTPLLVQTFLIYYGLAQFAFIRESWAWELLRSPWWCALIAFTLNSGAYGTEIIRGAVSTTPRGEVEAALSLGLSPRQTEYLLVVPSALRRALPQYSNEVVFMLHASSVASVITIRDILGAGRTLNAKYYLAYEGFLTAAALYMAITFALVAAFRGLEARFLRHLGPRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB19</accession>
    <name>A0A2M9PB19_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helix-turn-helix domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000803">
        <property type="protein sequence ID" value="PJN94736.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="16"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94736.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="41" mass="4644" checksum="08FB7585F196A477" modified="2018-04-25" version="1" fragment="single">DGLPPPSQPFLDRMEPDLPSAKRPEPDQMDLETYLACRDSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB66</accession>
    <name>A0A2M9PB66_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Secretion protein HlyD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12425</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000775">
        <property type="protein sequence ID" value="PJN94780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039562">
        <property type="entry name" value="MFP_biotin_lipoyl_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13533">
        <property type="entry name" value="Biotin_lipoyl_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="42"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin_lipoyl_2" evidence="3">
        <location>
            <begin position="83"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="114"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="193"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="21808" checksum="78E931DE4A299861" modified="2018-04-25" version="1" fragment="single">MLELLLCSSLTILPDFLYRRFGQGKRFGREITLFSVWYELRWGITTCLILTLSLITTIFYFHPSTTAAVSYFRTISVLPEGFGRVTEVYVDYRDEVKAGEPLFRLDDTEQKAAIETATRQIAEVEAKMTTAQSTLAEAEGRIVQARGLLQQAVDEFDTRAELMRRNSNAIAQRDVDRAQVAVDTQQGLLDAAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB84</accession>
    <name>A0A2M9PB84_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase ATP-binding domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000764">
        <property type="protein sequence ID" value="PJN94800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140640">
        <property type="term" value="F:catalytic activity, acting on a nucleic acid"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011545">
        <property type="entry name" value="DEAD/DEAH_box_helicase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014001">
        <property type="entry name" value="Helicase_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00270">
        <property type="entry name" value="DEAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SMART" id="SM00487">
        <property type="entry name" value="DEXDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51192">
        <property type="entry name" value="HELICASE_ATP_BIND_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase ATP-binding" evidence="1">
        <location>
            <begin position="33"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51192"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="233" mass="24841" checksum="1F8746A4CEEE448F" modified="2018-04-25" version="1">MTDTPPDLQADTRELLASVFGFPDFRPGQGEVVEAVQAGRDVLAIMPTGGGKSLLYQLPALTRPGVTLVISPLIALMRDQVRALQAVGVAAGALTSQSTQGETEEVFDQIDAGRLKLLYMAPERLAAPATPGLLRRIGVSLLAVVQMTKQHALEWARHGVRVNALCPGYVETDLNRDFFATEAGLAQIRRIPQRRLGRPEELDGPLLLLASDAGSFMTGTALVADGGHLVSPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK6</accession>
    <name>A0A2M9PBK6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000702">
        <property type="protein sequence ID" value="PJN94909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003951">
        <property type="term" value="F:NAD+ kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006741">
        <property type="term" value="P:NADP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10330">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017438">
        <property type="entry name" value="ATP-NAD_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016064">
        <property type="entry name" value="NAD/diacylglycerol_kinase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002504">
        <property type="entry name" value="NADK"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01513">
        <property type="entry name" value="NAD_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111331">
        <property type="entry name" value="SSF111331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10808" checksum="BD01069CBDDE036B" modified="2018-04-25" version="1" fragment="single">MAFQHIHFVSSGVDIAEEARARLVHRHGQAPLGEADVIVALGGDGLMLSTLHATKGLGLPVYGMNRGTVGFLMNEYVEDGLVERLAAAEEAVINPLRMRAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT2</accession>
    <name>A0A2M9PBT2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_11070</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000653">
        <property type="protein sequence ID" value="PJN95003.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13404">
        <property type="entry name" value="HTH_AsnC-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="4"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95003.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17527" checksum="34998E495BF69771" modified="2018-04-25" version="1">MDRLDLIDRKIVAELMRDAAQPIAQIAEKVGLSQTPCWKRIQKLENAGVVTGRVATVDPRRLGFGLSVFVEIEATDHGADWRNSFLEAVTSLPEVMDVFRMAGEMDYLLRVAVPDMAAFDALYQKLTEAVEIKNVTSHFAMEQIKASTVYPVDTANR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV7</accession>
    <name>A0A2M9PBV7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator RepA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10930</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000642">
        <property type="protein sequence ID" value="PJN95028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="24535" checksum="C20F58409F76D614" modified="2018-04-25" version="1" fragment="single">QIETNIITGGQEQIDTFSLIDRVRIIRETRDGRMMDVEVTLSDWVFNAIRANEVLTLNRDYFRLRKPLERRLYELARKHCGTKDIWKIGLELLQKKCGSNSTLFEFRRLVKTIADADGKHQHMPDYAVSLTADDFVTFESRGSVPGRRTNGGGVALLDHGDYEAARAAAPGWDVYQIECEWRSWCADKKAAPKRPGAHFVRFCKSWFEKRGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX1</accession>
    <name>A0A2M9PBX1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">GSCFA family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000633">
        <property type="protein sequence ID" value="PJN95047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014982">
        <property type="entry name" value="GSCFA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08885">
        <property type="entry name" value="GSCFA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GSCFA" evidence="2">
        <location>
            <begin position="16"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="291"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="36882" checksum="2BF2BFDC60C80604" modified="2018-04-25" version="1">MEKLYAKRFSIAPTDRIATAGSCFAQHIARNFRARGFTVMDVERAPYPSSQALCQAYGYGVYSARYANIYTVRQLLELFREATAEDRGEAPWPVLVWEKKGRFVDGMRPGVEPDGLDSPEEVIAQRRDHLARVRQLFAEMQVFVFTMGLTEAWIDTASGRTLPTCPGTIAGTFDPEVHKFRNFSFKSILSDYRAFRRELAAFNPGVRHLITVSPVPLTATASNQHVLVATMYSKSVLRAVAGQLYADHRDLDYFPSYEIIAAHPSRGFFFEGNLRSVSPAGVETVMRSFFSEHGGGSSGPRKSRGKSGGGAPAEEGSGEDVVCEEILLEAFAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC53</accession>
    <name>A0A2M9PC53_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tat pathway signal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10330</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000592">
        <property type="protein sequence ID" value="PJN95126.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011042">
        <property type="entry name" value="6-blade_b-propeller_TolB-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008557">
        <property type="entry name" value="PhoX"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05787">
        <property type="entry name" value="DUF839"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="593"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95126.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="593" mass="64559" checksum="9C66C41A7E665CBE" modified="2018-04-25" version="1" fragment="single">MLGFEPVSVSAADAITVPAGYRAQPILASGTPIAGAMPEFAAENTGADQALQVGQHHDGMHFFPIDGSSTDGLLVMNHEYIEPRFLNAAFQGQALDSSGVVYDAEGLRDADQVLKELNAHGVSVAHVRRDAAGAWALVPDPRNRRITGLTPMEIGGPVRGAELVRTKFSPDGTMTRGTLNNCSNGWTPWGTYLTCEENWAGYFVNLDAEQPREHDRYGVGDTREGERYGWHLAQGGADEFVRFDATAKGASAAEDYRNEPNGFGWVVEIDPFDPESVPVKRTHLGRFAHEGVVFHEPRAGERVVCYSGDDSRFEYIYKFVSAAPYAEGVSDGSILDEGTLHVARFNEDGTGDWLALAPGENGLTPEEGFADLADILLNTRLAADKAGATKMDRPEWGAVDPRTRQVYFTLTNNSRRLQTQVDAANPRALNEFGHIIRWREDGDDPASARFAWDLFVIAGDEKRSETSAGKALDESNIFACPDGLCFDADGRLWIQTDIGEAQQNTGEFEVFGNNQMLVADPETGEIRRFLTGPVGQEITGLAFTPDRTTVFVNVQHPGSTTTPEDFAAGKVNSRWPDGDGAIWPRSATVAISR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC71</accession>
    <name>A0A2M9PC71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10475</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000605">
        <property type="protein sequence ID" value="PJN95102.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003916">
        <property type="term" value="F:DNA topoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95102.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10651" checksum="B381E4991EAEDE67" modified="2018-04-25" version="1">MPADRGRHVAVVGENRKLLVFPVTELPEMGRGKGVRLQKYKDGGLSDAATFTLAEGLGWKERGGRNRLVTELADWTGPRASAGRMAPRGFPQTNRFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC97</accession>
    <name>A0A2M9PC97_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Homoserine O-acetyltransferase</fullName>
            <shortName evidence="4">HAT</shortName>
            <ecNumber evidence="4">2.3.1.31</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Homoserine transacetylase</fullName>
            <shortName evidence="4">HTA</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">metAA</name>
        <name evidence="6" type="ORF">CNY89_10035</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>acetyl-CoA + L-homoserine = CoA + O-acetyl-L-homoserine</text>
            <dbReference type="Rhea" id="RHEA:13701"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:57476"/>
            <dbReference type="ChEBI" id="CHEBI:57716"/>
            <dbReference type="EC" id="2.3.1.31"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-methionine biosynthesis via de novo pathway; O-acetyl-L-homoserine from L-homoserine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the MetA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.31" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000570">
        <property type="protein sequence ID" value="PJN95177.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00051">
        <property type="reaction ID" value="UER00074"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004414">
        <property type="term" value="F:homoserine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008899">
        <property type="term" value="F:homoserine O-succinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019281">
        <property type="term" value="P:L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03131">
        <property type="entry name" value="GATase1_HTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00295">
        <property type="entry name" value="MetA_acyltransf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005697">
        <property type="entry name" value="HST_MetA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033752">
        <property type="entry name" value="MetA_family"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20919">
        <property type="entry name" value="PTHR20919"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04204">
        <property type="entry name" value="HTS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000450">
        <property type="entry name" value="H_ser_succinyltr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01001">
        <property type="entry name" value="metA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0486">Methionine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 6" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Acyl-thioester intermediate" evidence="4 5">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="4">
        <location>
            <position position="215"/>
        </location>
    </feature>
    <feature type="active site" evidence="4">
        <location>
            <position position="217"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="143"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="172"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="229"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Important for acyl-CoA specificity" evidence="4">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <feature type="site" description="Important for substrate specificity" evidence="4">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR000450-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95177.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="285" mass="32879" checksum="87D644C2548C3B97" modified="2018-04-25" version="1">MVMAEERARSQDIRPLQIGLLNLMPKKVQTETQFARLIGATPLQIDLTLIRMSDHRSKNTAAAHLETFYQPFREARSRKFDGLIITGAPIEHLDYEAVGYWDELREVFDWTQTSVHRTFGVCWGGMAMLNHFHGVPKHALPAKAFGCFRHRMLDRASPYLQGFSDSFMVPVSRWTEVRNEDLALHPELRLLVDSDELGPCLVEDAGRRALYMFNHLEYDSTTLRDEYQRDLAAGGTIHPPASYFPDNDPSREPENLWRSHATLLYVNWINEIYQSTPYDLDRIGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL8</accession>
    <name>A0A2M9PCL8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Chromosome partitioning protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000529">
        <property type="protein sequence ID" value="PJN95254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="1">
        <location>
            <begin position="135"/>
            <end position="338"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="448" mass="49938" checksum="5588827EC53AFE15" modified="2018-04-25" version="1">MSETEALPPYFNISPDEALAELGPPVGAEDFAEIARHCAEGRQDLVRRGLNPDGSRRLRLFSTWEITRYLIPVAPAHFRRVLRANPALPQGASETEGGAKWFSLDEVLRLRAHFAAEGSRAKEYRPWRPAGLPAKVVAVANFKGGVGKTSMAAHLAMSAALDGYRVLIVDLDSQGSMTSMFGGRVASEWDTVFPLIARDYALGLQAENRRRAERGEATLPLEDMLAEALTKTTRDVIQKTHWPSIDLIGAQLNLYWAEFQIPVWRMSLKGWKLWEALERALERDRALEAYDIVLLDTPPALGYLTINGLTAADILLVPLGASFLEFDSTGRFFDMLHSTFQSIEAGENLAARALGRPEIRFEWDAVRAVVTRYDGGQQAEMAGLMQAYLGRTLTPWRQDLTALVGQSGEQARGIYEADYRDFNRDTYARGRQTFDATWAAVKWSSVSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ6</accession>
    <name>A0A2M9PCQ6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Glucose-6-phosphate 1-dehydrogenase</fullName>
            <shortName evidence="5">G6PD</shortName>
            <ecNumber evidence="5">1.1.1.49</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 9" type="primary">zwf</name>
        <name evidence="9" type="ORF">CNY89_09100</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the oxidation of glucose 6-phosphate to 6-phosphogluconolactone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>D-glucose 6-phosphate + NADP(+) = 6-phospho-D-glucono-1,5-lactone + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:15841"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57955"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:61548"/>
            <dbReference type="EC" id="1.1.1.49"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="5">Carbohydrate degradation; pentose phosphate pathway; D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage): step 1/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the glucose-6-phosphate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.49" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000496">
        <property type="protein sequence ID" value="PJN95336.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00115">
        <property type="reaction ID" value="UER00408"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004345">
        <property type="term" value="F:glucose-6-phosphate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006006">
        <property type="term" value="P:glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00966">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001282">
        <property type="entry name" value="G6P_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019796">
        <property type="entry name" value="G6P_DH_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022675">
        <property type="entry name" value="G6P_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022674">
        <property type="entry name" value="G6P_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23429">
        <property type="entry name" value="PTHR23429"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02781">
        <property type="entry name" value="G6PD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00479">
        <property type="entry name" value="G6PD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000110">
        <property type="entry name" value="G6PD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00079">
        <property type="entry name" value="G6PDHDRGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00871">
        <property type="entry name" value="zwf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00069">
        <property type="entry name" value="G6P_DEHYDROGENASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="1 5" id="KW-0313">Glucose metabolism</keyword>
    <keyword evidence="2 5" id="KW-0521">NADP</keyword>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="G6PD_N" evidence="7">
        <location>
            <begin position="14"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="G6PD_C" evidence="8">
        <location>
            <begin position="191"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="5">
        <location>
            <position position="242"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <begin position="17"/>
            <end position="24"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="150"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="180"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 6">
        <location>
            <position position="184"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="218"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="237"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="333"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF02781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95336.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="485" mass="53864" checksum="9D57B193FB0F5A3B" modified="2018-04-25" version="1">MVSTVIPVQPFDLVVFGATGDLAKRKILPSLFRRMAVHQVPEGARIIGAARSQMSRDDFRKLAEDSLKEFVAPKLRDPALVAQFLDALDYVHVDAGGVDGWSELAVKLDEKPEHIRAFYLSVAPALFGQIAEKLANAGVATPTSRIVVEKPLGKDLASARELNAQLSKHFGEDQIYRIDHYLGKETVQNLMAIRFANALFEPLWNSRYVDHVQITVAESIGVAGRGEYYDKSGAMRDMVQNHMMQLLCLTAMEPPAHFEPNMVRDEKLKVIRSLDPLKLSDTVRGQYRAMGKGASYLDDVKNPASRTESFVAIRARVSNWRWSGTPFYLRTGKKLGARLSEIAVVFRDPPHSIFPKVEDLRGNALIIRLQPDEGITMRVTIKEPGPGGMRLTEVPLDMTFSDALGESGEMPEAYERLIMDVIRGDQTLFMRGDEVEAAWAWTDPIISAWAESGSKPQQYDPGSAGPIDSYKLTSAGGHLWREIAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS0</accession>
    <name>A0A2M9PCS0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09010</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000490">
        <property type="protein sequence ID" value="PJN95347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13419" checksum="0BC0E891C1A00809" modified="2018-04-25" version="1" fragment="single">MNLKELSRILNLSTTTVSRALNGYPEVNSETRDRVMTAARRHGYVPNRPAQRLATGRSMAIGHVVSLGVHQVINPIFSDFLLGAGDAYSRHGYELILSIVPEAREVETFESLARRRTVDGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCX3</accession>
    <name>A0A2M9PCX3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phage major tail tube protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000483">
        <property type="protein sequence ID" value="PJN95364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006498">
        <property type="entry name" value="Tail_tube"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35861:SF2">
        <property type="entry name" value="PTHR35861:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04985">
        <property type="entry name" value="Phage_tube"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01611">
        <property type="entry name" value="tail_tube"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="17730" checksum="153920FE34F5A46C" modified="2018-04-25" version="1">MAYPRFIRNFNVFIDGVSYFGRAVEGKLPDVKIATAAHRGAGMDGPVGVDMGLEGMSAEASMAEWDPVLLKKIGTQQRLVFRPAAQRDGEAEAVPIIATIGGLVTAHELPGLKPGENSVMKLTIDVRTYRLEIGGDEVWNIDLPNAKRVIGGVDQLASIRKAMGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD30</accession>
    <name>A0A2M9PD30_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Type II secretion system protein K</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_08385</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2 11">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 11">Belongs to the GSP K family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000444">
        <property type="protein sequence ID" value="PJN95455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.40.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005628">
        <property type="entry name" value="GspK"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038072">
        <property type="entry name" value="GspK_central_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045584">
        <property type="entry name" value="Pilin-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR38831">
        <property type="entry name" value="PTHR38831"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03934">
        <property type="entry name" value="T2SSK"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002786">
        <property type="entry name" value="XcpX"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54523">
        <property type="entry name" value="SSF54523"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 11" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5 11" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4 11" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="7"/>
            <end position="29"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007246"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR002786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="286" mass="30472" checksum="4D715B92E5868831" modified="2018-04-25" version="1">MTRDHDSGLILINVLVILSLAATVVYVMLTLADLAIARSQAFSAAGEGLALIQGGEQFAIAALRRDMIDAPDSDNPAEPWKRVEQEAIDIPGGTIELRIEDAQGLFNLNTLAGATPRGEGILRLIGEAIDLPPQIVARIVTSLQFDGPLPRIEDLRDRAGLSPEDLSNLSRFATALPGKGEVNANAAPVELLTLLIDSPAQARMLLARRARAGFLTPADFETAQVEPPPGVGYRSDLYRLRTTVRLGPTVQSVESLLLRHDGPTGPEVVVIGRRNALAVVAPPPSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD63</accession>
    <name>A0A2M9PD63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribosomal-protein-alanine acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000432">
        <property type="protein sequence ID" value="PJN95485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6082" checksum="D5D25B4F7F25104F" modified="2018-04-25" version="1" fragment="single">ARGAEEAFLEVSAENAPARALYAALGWRAAGIRRGYFGPGLDAIVLRKNLLPRDAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC1</accession>
    <name>A0A2M9PDC1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Antibiotic biosynthesis monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000413">
        <property type="protein sequence ID" value="PJN95529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007138">
        <property type="entry name" value="ABM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03992">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51725">
        <property type="entry name" value="ABM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABM" evidence="1">
        <location>
            <begin position="2"/>
            <end position="100"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11907" checksum="78C3EAD3ACEBF4E4" modified="2018-04-25" version="1">MFIAMNRFRIVPGAEADFEEMWRNRDSQLDKVEGFLAFKLLRGEPEEDHVPYVSHSMWRDKEAFIGWTKGEHFRRAHATAGSSKPMYLGPPRFEGFETVLES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC3</accession>
    <name>A0A2M9PDC3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Cell division protein FtsH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_07835</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the AAA ATPase family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">In the C-terminal section; belongs to the peptidase M41 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000405">
        <property type="protein sequence ID" value="PJN95547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.58.760">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01458">
        <property type="entry name" value="FtsH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041569">
        <property type="entry name" value="AAA_lid_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003960">
        <property type="entry name" value="ATPase_AAA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005936">
        <property type="entry name" value="FtsH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011546">
        <property type="entry name" value="Pept_M41_FtsH_extracell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000642">
        <property type="entry name" value="Peptidase_M41"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037219">
        <property type="entry name" value="Peptidase_M41-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17862">
        <property type="entry name" value="AAA_lid_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06480">
        <property type="entry name" value="FtsH_ext"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01434">
        <property type="entry name" value="Peptidase_M41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140990">
        <property type="entry name" value="SSF140990"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01241">
        <property type="entry name" value="FtsH_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00674">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="12" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="12" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="4 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="101"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="domain" description="AAA" evidence="11">
        <location>
            <begin position="186"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="597"/>
            <end position="631"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="631"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010044"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023049"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="631" mass="68307" checksum="FA91DA4CE6F33608" modified="2018-04-25" version="1" fragment="single">MGNTKNIAFWIILFLLMVALFNVFSNGSRTNMGREVNYSDFLDRVEGGQVAAVRLDGERVYVTGSDGSVYQTVQPRGTDILPDLREHKVEIQATPQEQSGFLSALGLWLPFLLLIGVWIFFMNRMQGGGRGGAMGFGKSKAKLLTEKSGKVTFNDVAGIDEAKEELEEIVEFLRDPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVQVTNPDIKGRDKILGVHARRVPLAADVDLRVIARGTPGFSGADLANLVNEAALMAARTGKRFVTMADFENAKDKVMMGAERRSMVLSDDERKLTAFHEAGHAIVGINTPQHDPIHKATIIPRGRALGLVMSLPERDQLSVTKTKYKSMIAMAMGGKVAEELTFGPDQVTSGAASDIQQVSRIARAMVTKFGMSDKLGNIDYANEQFSYLGPQGGGLNAGPDTHELIDAEVRALVDEGYETAKRILTEKREDLHRLANGLLEYETLTGKEIARVIAGLPLNRGSDDDTPQDGPSGVASIPRAGKSARPREDNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF4</accession>
    <name>A0A2M9PDF4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aspartate aminotransferase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07605</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000388">
        <property type="protein sequence ID" value="PJN95581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005814">
        <property type="entry name" value="Aminotrans_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00202">
        <property type="entry name" value="Aminotran_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="1" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23815" checksum="1EBCB86E5B840B9E" modified="2018-04-25" version="1" fragment="single">MSPTLSNSQIRDTEALLHPYSNAVQIRETGVHIFERGEGIRVYDQSGCGYIEALSGLWCAGLGFGHPELVEAAKRQLERLPYYHLFTGKSHEPAVELAEKIKALAPGMARVFYQSSGSEANETQVKMAWYYNNARGRREKKKIVSRQKAYHGVTIVSASLTGLPYNHMDFDLPVAGVRHTATPHYWKGAQPGESETAFSARLAAELDALIEAAPAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL3</accession>
    <name>A0A2M9PDL3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 10">Arginase</fullName>
            <ecNumber evidence="3 10">3.5.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">rocF</name>
        <name evidence="11" type="ORF">CNY89_07495</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 10">
            <text>H2O + L-arginine = L-ornithine + urea</text>
            <dbReference type="Rhea" id="RHEA:20569"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:32682"/>
            <dbReference type="ChEBI" id="CHEBI:46911"/>
            <dbReference type="EC" id="3.5.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="10">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="10">Binds 2 manganese ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; urea cycle; L-ornithine and urea from L-arginine: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8 9">Belongs to the arginase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.3.1" evidence="3 10"/>
    <dbReference type="EMBL" id="PHNO01000379">
        <property type="protein sequence ID" value="PJN95604.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00158">
        <property type="reaction ID" value="UER00270"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004053">
        <property type="term" value="F:arginase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006525">
        <property type="term" value="P:arginine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000050">
        <property type="term" value="P:urea cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd09989">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014033">
        <property type="entry name" value="Arginase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006035">
        <property type="entry name" value="Ureohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023696">
        <property type="entry name" value="Ureohydrolase_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020855">
        <property type="entry name" value="Ureohydrolase_Mn_BS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43782">
        <property type="entry name" value="PTHR43782"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00491">
        <property type="entry name" value="Arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00116">
        <property type="entry name" value="ARGINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52768">
        <property type="entry name" value="SSF52768"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01229">
        <property type="entry name" value="rocF_arginase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01053">
        <property type="entry name" value="ARGINASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51409">
        <property type="entry name" value="ARGINASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 10" id="KW-0056">Arginine metabolism</keyword>
    <keyword evidence="7 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-0464">Manganese</keyword>
    <keyword evidence="6 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00018123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361159"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95604.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="331" mass="36241" checksum="991F0D42D92A4F52" modified="2018-04-25" version="1">MFERFDPSRATAAARLAQSIDILGIGLEIGAETQGTEMGWKAMRLAGLPQALETIGHEVRDRGMIAEALPLAPVAMEPRWAERCRHLDEVAAWVRRIHDRSYDIAREGGVPIFIGGDHSISMGTISGVARARAEAGRRIAVLWLDAHADYNTPQTTPSGNLHGMALAMLTGDATLAPILGDRPFPAIDRGLTHVFGARSIDPEERALLQEHGIDVVDMRQIDERGVSALMAERIERWAHEDVDLHVSLDVDFLDPSVAPGTGTMVPGGATYREAHLVLEMLHDSKLVRSVDLVELNPFLDERGRSAFVMTELLASLFGRTVFDRPRRLAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN7</accession>
    <name>A0A2M9PDN7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transcription termination factor Rho</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">rho</name>
        <name evidence="8" type="ORF">CNY89_07120</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the Rho family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000354">
        <property type="protein sequence ID" value="PJN95665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008186">
        <property type="term" value="F:ATP-dependent activity, acting on RNA"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01128">
        <property type="entry name" value="rho_factor"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01884">
        <property type="entry name" value="Rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000194">
        <property type="entry name" value="ATPase_F1/V1/A1_a/bsu_nucl-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041703">
        <property type="entry name" value="Rho_factor_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011113">
        <property type="entry name" value="Rho_RNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004665">
        <property type="entry name" value="Term_rho"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR46425">
        <property type="entry name" value="PTHR46425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00006">
        <property type="entry name" value="ATP-synt_ab"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07497">
        <property type="entry name" value="Rho_RNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00767">
        <property type="entry name" value="rho"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51856">
        <property type="entry name" value="RHO_RNA_BD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0804">Transcription</keyword>
    <keyword evidence="4" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="Rho RNA-BD" evidence="7">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01203"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51856"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="325" mass="36253" checksum="4FDB8D6F3E43AD63" modified="2018-04-25" version="1" fragment="single">GDTVEGVIRAPKEGERYFGLVKVSRINFEDPEKARHKVHFDNLTPLYPDERFKLEIEDPTIKDRTARVIDLVAPIGKGQRGLIVAPPRSGKTVIMQNIAASIEKNHPECYLIVLLVDERPEEVTDMQRSVKGEVIASTFDEPATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKIADKRVFPAIDILKSGTRKEELLVDKADLTKMFVLRRILNPMGTTDAIEFLLGKLKQTKTNSEFFDSMNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ8</accession>
    <name>A0A2M9PDQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase</fullName>
            <ecNumber evidence="5">2.7.4.7</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07105</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + ATP = 4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine + ADP</text>
            <dbReference type="Rhea" id="RHEA:19893"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57841"/>
            <dbReference type="ChEBI" id="CHEBI:58354"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.7"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine + ADP + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23096"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16892"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:58354"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.1.49"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; thiamine diphosphate biosynthesis; 4-amino-2-methyl-5-diphosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole: step 3/3.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.7" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000353">
        <property type="protein sequence ID" value="PJN95669.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00060">
        <property type="reaction ID" value="UER00138"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008902">
        <property type="term" value="F:hydroxymethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008972">
        <property type="term" value="F:phosphomethylpyrimidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009228">
        <property type="term" value="P:thiamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009229">
        <property type="term" value="P:thiamine diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045029">
        <property type="entry name" value="HMP/HMP-P_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013749">
        <property type="entry name" value="PM/HMP-P_kinase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR20858">
        <property type="entry name" value="PTHR20858"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08543">
        <property type="entry name" value="Phos_pyr_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Phos_pyr_kin" evidence="4">
        <location>
            <begin position="7"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000565"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95669.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="12100" checksum="0D8C3DA730C87765" modified="2018-04-25" version="1" fragment="single">MTIAGSDSGGGAGIQADLKTFSAFGVYGASVITAITAQNTRAVTAVEALSPALVLAQLDAVLDDIPPDAIKIGVLVAPAIVEAVAERLTGIEAPLVLDPVMIAKSGDPLLAPEAAAAIRLAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS9</accession>
    <name>A0A2M9PDS9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Protein-export membrane protein SecF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9 10" type="primary">secF</name>
        <name evidence="10" type="ORF">CNY89_07090</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the SecD/SecF family. SecF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000351">
        <property type="protein sequence ID" value="PJN95672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015450">
        <property type="term" value="F:protein-transporting ATPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0065002">
        <property type="term" value="P:intracellular protein transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006605">
        <property type="term" value="P:protein targeting"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043952">
        <property type="term" value="P:protein transport by the Sec complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01464_B">
        <property type="entry name" value="SecF_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022813">
        <property type="entry name" value="SecD/SecF_arch_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022645">
        <property type="entry name" value="SecD/SecF_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022646">
        <property type="entry name" value="SecD/SecF_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005665">
        <property type="entry name" value="SecF_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30081">
        <property type="entry name" value="PTHR30081"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07549">
        <property type="entry name" value="Sec_GG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02355">
        <property type="entry name" value="SecD_SecF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01755">
        <property type="entry name" value="SECFTRNLCASE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00916">
        <property type="entry name" value="2A0604s01"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00966">
        <property type="entry name" value="3a0501s07"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="5 9" id="KW-0653">Protein transport</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7 9" id="KW-0811">Translocation</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="142"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="170"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="197"/>
            <end position="218"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="245"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="273"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023010"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="318" mass="34435" checksum="1450D870C24EAA8D" modified="2018-04-25" version="1">MRRLRFVPDVTTIDFMGRARLWVTFSILMTLGSLVLIFTRGFNLGVDFRGGALIIASTPAPEDVGRFREVLTGLDFGEVAVTEVSDDSGAGRFTVLMRLGIADPDANAAQVVETVRAELSAAFPGIQYLQVDSVGSKVSSELVRNGALAVALAFLGIMVYVWLRFEWQFAVGAVLSVMHDALVTLGLFSLLQLEFNLTIVAAVLTVIGYSINDTVVIFDRVRELLRKYKKTPLPQLMNMALNETLSRTVMTSSTTLIALLAIFFFGGDVVHGFAIAMIFGGVLVGTYSTIYVACATVLWLGVRRDWSGAEAASAAVKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV8</accession>
    <name>A0A2M9PDV8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000344">
        <property type="protein sequence ID" value="PJN95694.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.130.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019405">
        <property type="entry name" value="Lactonase_7-beta_prop"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011045">
        <property type="entry name" value="N2O_reductase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022456">
        <property type="entry name" value="PQQ_b_propeller"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015943">
        <property type="entry name" value="WD40/YVTN_repeat-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001680">
        <property type="entry name" value="WD40_repeat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011964">
        <property type="entry name" value="YVTN_b-propeller_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10282">
        <property type="entry name" value="Lactonase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00320">
        <property type="entry name" value="WD40"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50974">
        <property type="entry name" value="SSF50974"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02276">
        <property type="entry name" value="beta_rpt_yvtn"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03866">
        <property type="entry name" value="PQQ_ABC_repeats"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014922512" evidence="1">
        <location>
            <begin position="21"/>
            <end position="320"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95694.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="320" mass="33966" checksum="8180142146BB98DB" modified="2018-04-25" version="1">MTRLAMLLAAAALPAGPALAEKIFVSNEKGNTVTVLDGATHEILHTIEGMQRPRGITASPDGKHIYVCASDDNLVRVYDAATYEELPSLPSGPDPELFVLHPSGNPLYIANEDDNIVTVVDVETRQVLAEIPVGVEPEGMGVSPDGGIVVNTSETTNMAHLIDTSTYEIVANVLVDSRPRFAEYSPDGKRLFVTAEIGGTVSVIDTASNEIIGKIAFEVPGVLPEALQPVGLRITADGKKGYVALGPANRVAVFDAATFDVLDYLLVGQRVWQLGFSPDGKFLYTTNGNSNDLSVIDVATDKVTKSVQVGEQPWGVVAVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW3</accession>
    <name>A0A2M9PDW3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Signal recognition particle-docking protein FtsY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000323">
        <property type="protein sequence ID" value="PJN95741.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="35"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95741.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6821" checksum="A82BAA5C8F3DAFAC" modified="2018-04-25" version="1" fragment="single">MAFFQKLKQRLFKSSSRIDEGLDALIEAAPAPDAPLPETLLPEPLLPETPEPETPKPVAEAAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW6</accession>
    <name>A0A2M9PDW6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">C4-dicarboxylate transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">dctA</name>
        <name evidence="7" type="ORF">CNY89_06915</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000339">
        <property type="protein sequence ID" value="PJN95703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006835">
        <property type="term" value="P:dicarboxylic acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01300">
        <property type="entry name" value="C4_dicarb_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023954">
        <property type="entry name" value="C4_dicarb_transport"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0769">Symport</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="17"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="56"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="86"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="153"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="193"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="229"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="360"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="443" mass="46532" checksum="4392B0794772DABE" modified="2018-04-25" version="1">MSHPQIRPAGRKPFYQILYVQVLIGIALAIFVGHFWPEVGIQMKPLGDGFIKLIKMVIALVIFCTVVSGIAGMSDLKKVGRVGGKALLYFEVVSTLALAIGLIVANVVRPGAGFNADPATLDAAAVEAYAGKAADQSVTDFLLHIIPNTVVDAFAQGDILPVVMISILFGYVLSHLGETARPIRDVIDAGSKLVFGVINVVMRLAPIGAFGAMAFTIGKYGVSSLGPLAFLIGTFYFTSVIFVLGVLGLIAWWSGFSIVRFLVYIKEEILIVLGTSSSDSALPSLMEKLERAGCSKPVVGLVVPTGYVFNTDGTSIYMTLAALFVAQATNVDLSIHQQLAIFAVAMLTSKGASGVTGASFIALVGTLAVIPAIPVAGMALILGIDRFMSEARALVNMIGNGVATIVMAKWEGELDQARLDAALSGAPLPLPGRDEEIDLAPPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDW7</accession>
    <name>A0A2M9PDW7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000339">
        <property type="protein sequence ID" value="PJN95704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12478" checksum="BFA5459BEDCFF833" modified="2018-04-25" version="1">MHVVRFDAAPPYAAPGHEGMRMVRLQGREAGPADLVWLGVSTIEPGGGTTLSASEVEKMYVVLDGEVTLSNGETEIRLGPLDSCRIAPREGRILRNDTRAVARILLAMPFAPTPEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX7</accession>
    <name>A0A2M9PDX7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5 7">50S ribosomal protein L15</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplO</name>
        <name evidence="10" type="ORF">CNY89_06695</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL15 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000322">
        <property type="protein sequence ID" value="PJN95747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01341">
        <property type="entry name" value="Ribosomal_L15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036227">
        <property type="entry name" value="L18e/L15P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030878">
        <property type="entry name" value="Ribosomal_L15"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005749">
        <property type="entry name" value="Ribosomal_L15_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001196">
        <property type="entry name" value="Ribosomal_L15_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021131">
        <property type="entry name" value="Ribosomal_L18e/L15P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12934">
        <property type="entry name" value="PTHR12934"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00828">
        <property type="entry name" value="Ribosomal_L27A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52080">
        <property type="entry name" value="SSF52080"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01071">
        <property type="entry name" value="rplO_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00475">
        <property type="entry name" value="RIBOSOMAL_L15"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L18e/L15P" evidence="9">
        <location>
            <begin position="27"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029547"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01341"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003888"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF00828"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="16596" checksum="21A909CB8F07E0B4" modified="2018-04-25" version="1">MKLNELRDNPGATKSRKRVARGPGSGKGKTAGRGIKGQKSRSGVAINAYEGGQMPLYMRLPKRGFTKPNRKEFAVINLGLLQKFVDAGKLDATAEIDETVLVASGLVRRKLDGVRLLGKGALTSALNLKLTGASASAVTAVEQAGGSVVLTAPAEPAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE22</accession>
    <name>A0A2M9PE22_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06545</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000311">
        <property type="protein sequence ID" value="PJN95772.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95772.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="13193" checksum="206E64E09BA0B613" modified="2018-04-25" version="1">MSRQARKHEHRLRRQFDAIVRGTSMPRGPVDWLIHDRKRLIRVPVAILLIIGGIFSFLPVLGAWMIPVGLMLLALDVPMLRPRVNAAVIRGRRRISLWRRRFFPDKSNPNKLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE79</accession>
    <name>A0A2M9PE79_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000282">
        <property type="protein sequence ID" value="PJN95855.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014611755" evidence="1">
        <location>
            <begin position="24"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="33"/>
            <end position="286"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95855.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="320" mass="33913" checksum="F8C959C3E2CDCCB0" modified="2018-04-25" version="1">MKRILATVSAVAVASVLAQGALAQDLTVGFSQIGSESGWRAAETTVTQAQAKERGIDLKFADAQQKQENQIKAVRGFIAQGVDAILIAPVVATGWDGVLKEAQEAEIPVVLLDRQIDAPDSLYLTAVTSDQVHEGKVAGEWLVADVGDKDCKVVELQGTTGSSPAINRKKGFEEAIAGHDNIVIVRSQTGDFTRTKGKEVMESFIKAEGGGKDICAVYAHNDDMAVGAIQAIKEAGLKPGTDIKVVSIDAVPDIFLAMAAGEANATVELTPNMAGPAFDVLGAYLKDGTEPPKWIQTESKLYTQADDPKAVYEQKKDLGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK1</accession>
    <name>A0A2M9PEK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heavy metal translocating P-type ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05255</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000237">
        <property type="protein sequence ID" value="PJN95980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00371">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008250">
        <property type="entry name" value="ATPase_P-typ_transduc_dom_A_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017969">
        <property type="entry name" value="Heavy-metal-associated_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006121">
        <property type="entry name" value="HMA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036163">
        <property type="entry name" value="HMA_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00403">
        <property type="entry name" value="HMA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00941">
        <property type="entry name" value="CDATPASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55008">
        <property type="entry name" value="SSF55008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81653">
        <property type="entry name" value="SSF81653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01047">
        <property type="entry name" value="HMA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50846">
        <property type="entry name" value="HMA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="131"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="155"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="183"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="domain" description="HMA" evidence="4">
        <location>
            <begin position="8"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="282"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="370"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50846"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="370" mass="38858" checksum="4E8F7CCEFB6E2A4C" modified="2018-04-25" version="1" fragment="single">MDGDTGVRREWAVSGMDCGSCVAKVKGAVERLPGASDVQVALMTEKLRLTLDESRTRQEDVEATVRALGYGIALAGTAPALKKTFVLPEAPAEENVLHGPTQDAGHGAPGHVHDDPADRGKRWYETGKGRLVLITGGLLAAAWIIEFFLSAQIGSWAFVLACLIGVAPVARRAWAALRMDQPFTIEALMTIAAIGALAIGAAQEAALVGFLFAVGEVLEGVAAGKARDGIRALAALVPKTALLEIGGQTREVPADVLEPGQVVLVRPGDRVPADGEIVEGVSGLDESPVTGESVPKSKGPGEPVFAGSINAEATLRVRVTKAASDNTIARIIRLVEEAEEARAPTERFIDRFSRWYMPAIVALAALVVLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF14</accession>
    <name>A0A2M9PF14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000183">
        <property type="protein sequence ID" value="PJN96147.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96147.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="16033" checksum="E0B855A9C6F32E8F" modified="2018-04-25" version="1" fragment="single">AAARHFVAIEDWLADGIPMATPTARTVLVDWQALKFQKLARIDPDSAAARHFVAIEDWLADGIPMATPTARTVLVDWQVRNLTAARAWRFLGARSIRARSAPPPSPFAACGIRSRPPRWRWRWPRRFPARGSRRRAPAMWE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF44</accession>
    <name>A0A2M9PF44_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH arsR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04075</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000174">
        <property type="protein sequence ID" value="PJN96175.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96175.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="8905" checksum="EFE3A5D57622F2AE" modified="2018-04-25" version="1">MNAPGPDLDLVFAALADPTRRAILTALLEGERNVGELAAPHAMSLAAISKHLQILARAGLIAQLREGRTTAISAMISLPSLPGSIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA3</accession>
    <name>A0A2M9PFA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Polyphosphate kinase 2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">ppk2</name>
        <name evidence="6" type="ORF">CNY89_03810</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000161">
        <property type="protein sequence ID" value="PJN96227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008976">
        <property type="term" value="F:polyphosphate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016898">
        <property type="entry name" value="Polyphosphate_phosphotransfera"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022488">
        <property type="entry name" value="PPK2-related"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022486">
        <property type="entry name" value="PPK2_PA0141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03976">
        <property type="entry name" value="PPK2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF028756">
        <property type="entry name" value="PPK2_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03707">
        <property type="entry name" value="PPK2_P_aer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PPK2" evidence="5">
        <location>
            <begin position="28"/>
            <end position="251"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="258"/>
            <end position="282"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="282" mass="32623" checksum="AEA67D0297C5137E" modified="2018-04-25" version="1">MSKKKHKRGQDGDLAAVARDPKAAKKARDKAYEARLSELHVELARLQAWVTATGARIVVIFEGRDAAGKGGMIKRITEKVSPRVFRVVALPAPSDRQKTQIYMQRYIEQLPAAGEIVIFDRSWYNRPGVERVMGYCTEQAATRFLQEIPHLESLLVESGITLLKYFLTVGEEEQERRFRQRIDDPVRQWKLSPMDLESYRRWWDYTAAYDEMIRKTDTGSAPWWIVDSNDKKAARINCITHLLGAIPYERIKYDEPRLGKRQKRPDDWSADTSPRNLVPSVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA9</accession>
    <name>A0A2M9PFA9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sorbosone dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04110</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000175">
        <property type="protein sequence ID" value="PJN96174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="4">
        <location>
            <begin position="1"/>
            <end position="399"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="173"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="415" mass="43614" checksum="8F60C55F2C837CCB" modified="2018-04-25" version="1" fragment="single">IDRDRERIARTETLESGKPIAQARGEIEGAADLWRYAAALARTLHGDSHNSLGRDMLGVVLKEPIGVVSIICPWNFPFLILSQKLPFALAAGCTAVIKPSEMTPSTAVILGELLLEAGLPAGVANVVLGYGDPVGAKMSTDPRVDMVSFTGSTGVGKAIVAAASGTLKKVSLELGGKNPQVIFADADLDQAADAIVFGVFFNAGECCNSGSRIIVHEDVAEDLLERIVALSRRVPFGDPLDARVQVGAIISPEHQAKIDGYVRGAVAAGASLRLGGGTLAIPGLGGRFYQPTVVAGVTPDMAIAREEVFGPVLSALTFQTLDEALSLANDAAYGLSAGVWSENVHTCLAFARRVRAGTVWTNSWMDGYPELPFGGFKQSGQGRELGRYGLDEFLEVKTVQMRIGATRAPWVAAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI8</accession>
    <name>A0A2M9PFI8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Tripartite tricarboxylate transporter TctB family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000134">
        <property type="protein sequence ID" value="PJN96306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009936">
        <property type="entry name" value="DUF1468"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07331">
        <property type="entry name" value="TctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="12598" checksum="0728548CF3CA1A5C" modified="2018-04-25" version="1" fragment="single">AIRAVGPTTLPYVVSAAFALLSIGTVLSALRGGFPPREADRAGPMLWIVGGLVLQMLLLKPAGFSIATGLLFAFTARGFGQGPLWKTIPIGFALSFVIYLIFGGLLNLSLPAGPLERLIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS9</accession>
    <name>A0A2M9PFS9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="8080" checksum="8A38FFF86EB0BC0C" modified="2018-04-25" version="1">MTHRADATEALTNSLVGLPISWAATFWLLPLFGLHPDVGQSLGVTMLFFALSVARSWVIRRAFRRFAHANIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT2</accession>
    <name>A0A2M9PFT2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nicotinate-nucleotide diphosphorylase (Carboxylating)</fullName>
            <ecNumber evidence="3">2.4.2.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.19" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000104">
        <property type="protein sequence ID" value="PJN96413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004514">
        <property type="term" value="F:nicotinate-nucleotide diphosphorylase (carboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027277">
        <property type="entry name" value="NadC/ModD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036068">
        <property type="entry name" value="Nicotinate_pribotase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002638">
        <property type="entry name" value="Quinolinate_PRibosylTrfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32179">
        <property type="entry name" value="PTHR32179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01729">
        <property type="entry name" value="QRPTase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51690">
        <property type="entry name" value="SSF51690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="QRPTase_C" evidence="2">
        <location>
            <begin position="1"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="100" mass="10539" checksum="26F136CA9CD9629F" modified="2018-04-25" version="1" fragment="single">ALEAARRVASHMCRVEIEVDRLDQLAEVLEVGGAEVVLLDNMDDPTLTQAVEMVAGRVVTEASGNMTLARLPGVAATGVDYVSCGALTHSARTLDLGLDF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV0</accession>
    <name>A0A2M9PFV0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12442" checksum="C2186F4D3037F1E8" modified="2018-04-25" version="1">MPISAENRARYPRDWKAIVSRIRDRSGNRCEGSPAYPDCRADNGFPHPVTGSRVVLTVAHLDHTPEHCGDENLRHMCQRCHLTYDAAHHAKNAAETRRKRRAAGDLFGGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ7</accession>
    <name>A0A2M9PFZ7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Dihydroorotase</fullName>
            <ecNumber evidence="4">3.5.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_02545</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 3/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class II DHOase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.3" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000098">
        <property type="protein sequence ID" value="PJN96439.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00117"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004151">
        <property type="term" value="F:dihydroorotase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019856">
        <property type="term" value="P:pyrimidine nucleobase biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004721">
        <property type="entry name" value="DHOdimr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002195">
        <property type="entry name" value="Dihydroorotase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43137">
        <property type="entry name" value="PTHR43137"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001237">
        <property type="entry name" value="DHOdimr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00856">
        <property type="entry name" value="pyrC_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00483">
        <property type="entry name" value="DIHYDROOROTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96439.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="300" mass="32766" checksum="8F206B478C2D536C" modified="2018-04-25" version="1" fragment="single">ARAYRDRILAALPSGQAFTPLMTLYLTETTDPEDVAAAAAEGLIAAVKLYPAGATTNSASGERDVERVLPVLERMAGIGLPLLVHGEVTDPAIDIFDREAVFLDRVLDPLRRRLPELKVTLEHVTTAEGVDYVRSAETGLTGTLTVHHLILNRNHLLVGGMRPHYYCLPVVKRETHRLALRAVAVSGDPRFYLGTDSAPHPRHAKEAECCSAGVFSATNAMACLAQVFEEEDALDRLEGFASLYGPAFHGLAPNEDRITLDRLDDPQPLPREIVTGAGPVTVFDPGFPLHWRVRDEEPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG12</accession>
    <name>A0A2M9PG12_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000086">
        <property type="protein sequence ID" value="PJN96478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06150">
        <property type="entry name" value="YjgF_YER057c_UK114_like_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035959">
        <property type="entry name" value="RutC-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006175">
        <property type="entry name" value="YjgF/YER057c/UK114"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035709">
        <property type="entry name" value="YoaB-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR47328">
        <property type="entry name" value="PTHR47328"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01042">
        <property type="entry name" value="Ribonuc_L-PSP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55298">
        <property type="entry name" value="SSF55298"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12010" checksum="E67EE15877500114" modified="2018-04-25" version="1">MAIRRISPGSRMSQAVVHGDTVWLAGQVGEEGADVSTQAAQALAEVEALLAEAGSGKDRILQVIVWLADMADFEAMNAVYDAWIDPANPPARATGEAKLATPGYRVEFIVTAAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG33</accession>
    <name>A0A2M9PG33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LuxR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000079">
        <property type="protein sequence ID" value="PJN96503.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06170">
        <property type="entry name" value="LuxR_C_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005143">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036693">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000792">
        <property type="entry name" value="Tscrpt_reg_LuxR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03472">
        <property type="entry name" value="Autoind_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00196">
        <property type="entry name" value="GerE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00038">
        <property type="entry name" value="HTHLUXR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00421">
        <property type="entry name" value="HTH_LUXR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75516">
        <property type="entry name" value="SSF75516"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50043">
        <property type="entry name" value="HTH_LUXR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH luxR-type" evidence="2">
        <location>
            <begin position="160"/>
            <end position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96503.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="26421" checksum="7593A5C688D7A70E" modified="2018-04-25" version="1">MERLQTTTSIEELHVWIHELRDTLGVAHVVYHTANIKGEQVGAFTYGLDWVRHYIERDYQAIDPVLLGAVRRFHPIDWKTLDWSSPHARQMLREAQAAGLGNQGWSIPLWGPSGEFAIFTVNHRADDADWAAYTRENAKELLVIAHLVHRQAKRILSNEVEPAAADLSPREREVLSRLGAGESRARVADALKISENTLRAYVDSARHKLGATNVTHAVALATQRGMIVPSGALPKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA7</accession>
    <name>A0A2M9PGA7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ammonia channel protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000064">
        <property type="protein sequence ID" value="PJN96569.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014806050" evidence="1">
        <location>
            <begin position="24"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96569.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6108" checksum="1BCAD0B3F2CD1960" modified="2018-04-25" version="1" fragment="single">MRDLLKLSGLTAALATLPALAFAQTEAGTVEAVPDIVEPLMDKGDVAWMLLSTILVLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT1</accession>
    <name>A0A2M9PGT1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00665</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000020">
        <property type="protein sequence ID" value="PJN96758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015000142" evidence="1">
        <location>
            <begin position="23"/>
            <end position="398"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="25"/>
            <end position="362"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="398" mass="41788" checksum="1B98ADE122245724" modified="2018-04-25" version="1">MKTFARSLASIAAVLAASAAFATDVKIGVLNDRSGVYADLSGEGSVVAARMAVEDFDAASKGINVEIVSADHQNKADIASNIARQWYDQDGVDAIFDVPTSSAALAVSEITREKDKIFINSGAGSADLTGKACSPNTIHWTYDTWALAHGTGGAMVAAGFDTWFFITADYAFGHALEADTSAVVTEAGGQVLGSVRHPFPGQDFSSFLLQAQASGAKVIGLANAGGDTVNTIKQASEFGITQSGQALAGLLIFITDVNALGLDAAQGLVLTESFYWDLNDDTRAWSDRFAQTMNGAKPTMVQAGVYAGVLHYLKAIEATGSKDAKTVMASMKATPTSDPLFGEGEVRADGRKIHDMYLFKVKAPEASTGPWDYYELVATIPADKAFRPLADGGCPLVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW5</accession>
    <name>A0A2M9PGW5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 8">Adenylate kinase</fullName>
            <shortName evidence="6">AK</shortName>
            <ecNumber evidence="6 8">2.7.4.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">ATP-AMP transphosphorylase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">ATP:AMP phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Adenylate monophosphate kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">adk</name>
        <name evidence="9" type="ORF">CNY89_00520</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 8">
            <text>AMP + ATP = 2 ADP</text>
            <dbReference type="Rhea" id="RHEA:12973"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.3"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="6">Purine metabolism; AMP biosynthesis via salvage pathway; AMP from ADP: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6 8">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="6">Consists of three domains, a large central CORE domain and two small peripheral domains, NMPbind and LID, which undergo movements during catalysis. The LID domain closes over the site of phosphoryl transfer upon ATP binding. Assembling and dissambling the active center during each catalytic cycle provides an effective means to prevent ATP hydrolysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the adenylate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.3" evidence="6 8"/>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00588">
        <property type="reaction ID" value="UER00649"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004017">
        <property type="term" value="F:adenylate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044209">
        <property type="term" value="P:AMP salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd01428">
        <property type="entry name" value="ADK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00235">
        <property type="entry name" value="Adenylate_kinase_Adk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000850">
        <property type="entry name" value="Adenylat/UMP-CMP_kin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033690">
        <property type="entry name" value="Adenylat_kinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23359">
        <property type="entry name" value="PTHR23359"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00094">
        <property type="entry name" value="ADENYLTKNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00113">
        <property type="entry name" value="ADENYLATE_KINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 6 7" id="KW-0418">Kinase</keyword>
    <keyword evidence="3 6" id="KW-0545">Nucleotide biosynthesis</keyword>
    <keyword evidence="4 6 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6 7" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="NMP" evidence="6">
        <location>
            <begin position="30"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="10"/>
            <end position="15"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="31"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="57"/>
            <end position="59"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="85"/>
            <end position="88"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="92"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="127"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="135"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="146"/>
        </location>
        <ligand>
            <name>AMP</name>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022727"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="19781" checksum="B6AECAE651A9CFBF" modified="2018-04-25" version="1">MNIILLGPPGAGKGTQALRLVDRRGLLQLSTGDMLRAAVKAGTEVGLKAKAVMEAGQLVSDDIVIGVVSERLEQPDAKAGVIFDGFPRTSAQAEALDRLLAEKGMKLDAVVEMKVPDELLVGRIQGRAAETGGTRADDNAETLKKRLAVYHAETAPLIEYYRGTGKLRTVDGAAGMDEVTDAIDAALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH38</accession>
    <name>A0A2M9PH38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Urea ABC transporter ATP-binding subunit UrtE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">urtE</name>
        <name evidence="5" type="ORF">CNY89_00485</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000014">
        <property type="protein sequence ID" value="PJN96794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017780">
        <property type="entry name" value="ABC_transptr_urea_ATP-bd_UrtE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43820:SF5">
        <property type="entry name" value="PTHR43820:SF5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03410">
        <property type="entry name" value="urea_trans_UrtE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="231"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25428" checksum="A91855067E8905AD" modified="2018-04-25" version="1">MLKVENVDLYYGAAQALRDVSVTAEAGQVTCVLGRNGVGKTSLLRSISGRQGIRSGAILWEGKDISRLRPDARAKVGVATVPQGREIFPLLTVKENLETGFALLPRRERAIPDEVFDLFPVLGEMMHRRGGDLSGGQQQQLAIGRAMVTRPKLLLMDEPTEGIQPSVIKDIGRAISYLRDQGTMAIVLVEQFFDFAIALANRVAVMDRGRVVLAGARDELDEDEVRRWMTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH75</accession>
    <name>A0A2M9PH75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="10">Multidrug ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_00200</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000005">
        <property type="protein sequence ID" value="PJN96844.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 6 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="39"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="80"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="163"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="185"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="271"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="9">
        <location>
            <begin position="42"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="8">
        <location>
            <begin position="362"/>
            <end position="601"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="395"/>
            <end position="402"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96844.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="618" mass="67430" checksum="64B6C91BC87D9BF6" modified="2018-04-25" version="1">MFRFFETRVDPYATYDEDAPPPARLWPFLRAYLRPLFPVMGWATLTILAVALTEVALIWYGGRLVDLLADTPPGEVWIRHGVELALVAVFVLALRPAIQALSGLLLNQAIMPNAGTIVRWRAHRHVLRQSVGWFQSDFAGRIANRVMQTAPAVAESTFQTLDALVYSAIYLLGALWLLADTDPRLAIPLLVWLGLYLWLVHWAIPRVGRASKAFSDARSAITGRIVDSYSNIQSVKLFAHTRTEEAYAGAAIERARRTFMDQMRIVTKMDLGLTLINGLLIVAVVGYAILLWSQGAASVGTVAAASALTLRLNAMTAWIMWSLSSLFQNLGVIREGMETIAQPIELADAPGAGDLRLERGEVVFDRVSHHYGKGSGGLAGISLTLRPGEKIGLVGRSGAGKSTLVNLALRFFDPDGGAIRIDGQDLRGVTQDSLRQRIGMVTQDPSLLHRSVRDNILYGRPDASQAEVEAAARRAEAHDFILGLEDGSGRRGYDAHVGERGVKLSGGQRQRIALARVILKDAPILVLDEATSALDSEVEAAIQDTLYGVMEGKTVIAIAHRLSTIARMDRIVVLEDGRIAEEGRHADLLARDGLYARFWRRQSGGFLDCGAPVPAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A0</accession>
    <name>A0A2M9P4A0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30215</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004713">
        <property type="protein sequence ID" value="PJN92381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7765" checksum="E32B9A253E877F5E" modified="2018-04-25" version="1" fragment="single">DQVAKSIGENRELIELISSNPDNIDYGEMIHVDTDGRSGITTVTDRGVESLLEFLADVRTWEGGIRQFLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I8</accession>
    <name>A0A2M9P4I8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Coproporphyrinogen III oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_29760</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004546">
        <property type="protein sequence ID" value="PJN92433.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00068">
        <property type="reaction ID" value="UER00113"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004109">
        <property type="term" value="F:coproporphyrinogen oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006783">
        <property type="term" value="P:heme biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1500.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001260">
        <property type="entry name" value="Coprogen_oxidase_aer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036406">
        <property type="entry name" value="Coprogen_oxidase_aer_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10755">
        <property type="entry name" value="PTHR10755"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01218">
        <property type="entry name" value="Coprogen_oxidas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00073">
        <property type="entry name" value="COPRGNOXDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF102886">
        <property type="entry name" value="SSF102886"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0350">Heme biosynthesis</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-0627">Porphyrin biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92433.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8138" checksum="C1B3E6F671B88440" modified="2018-04-25" version="1" fragment="single">PEAQRSLTARKAIPGLEADPRFWAAGISLVAHLRSPLTPAVHMNTRMFWTSGGWWFGGGSDLNPMIEDPEDTAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R1</accession>
    <name>A0A2M9P4R1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004292">
        <property type="protein sequence ID" value="PJN92509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7412" checksum="999F335268DEE1A5" modified="2018-04-25" version="1" fragment="single">MRRIGMSDLGEALRLGWEDFKACRSDVTFLVVLYPVIGLALPHAGPAPGAAHRDERPGRGAASRLGGLQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U7</accession>
    <name>A0A2M9P4U7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004130">
        <property type="protein sequence ID" value="PJN92562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8040" checksum="36A6E81B309CE24B" modified="2018-04-25" version="1" fragment="single">MGLWALTRTAAQGLAPQIRVNEPAARAVVVNMIDQRVLEAHPRVLNLHDRPRVGLWALTRTAAQGLAPQIRVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P526</accession>
    <name>A0A2M9P526_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003947">
        <property type="protein sequence ID" value="PJN92623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008649">
        <property type="term" value="F:rRNA methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070475">
        <property type="term" value="P:rRNA base methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007473">
        <property type="entry name" value="RlmJ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04378">
        <property type="entry name" value="RsmJ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9761" checksum="6D26CD245906D6B2" modified="2018-04-25" version="1" fragment="single">PRRGLVLVDPSYEVKTEYAAIAGFTRRLLAKWPEAAVLIWYPLLPAGRHAALAPLAAAPRAGAGRSLLRGEDRIRRDRRFHPPPAGEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P532</accession>
    <name>A0A2M9P532_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27720</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003831">
        <property type="protein sequence ID" value="PJN92664.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92664.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10095" checksum="A3F9669B1E1549BE" modified="2018-04-25" version="1" fragment="single">GTFLDKTGQPCREYELLDPEAMALTQGVACRSGDGEWQTEVSVASRMDPVAETPQRITLVGTFLDKTGQPCREYELLDPEAMALTQGVACRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G7</accession>
    <name>A0A2M9P5G7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003509">
        <property type="protein sequence ID" value="PJN92777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11593" checksum="87A2F573C1C10B03" modified="2018-04-25" version="1" fragment="single">AFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAMPHPETATGAGAAPPRKLRTAARCYRRAKAQFSTRDSSRRWMSDWGHVRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I5</accession>
    <name>A0A2M9P5I5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26475</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003441">
        <property type="protein sequence ID" value="PJN92797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6647" checksum="D84BE8C65034E1B3" modified="2018-04-25" version="1" fragment="single">MAAYQSHRRLPLGRRRHARRSASSPCANFPAFQSKPVVRVYLCPFYVPTPAGSRTCPTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S8</accession>
    <name>A0A2M9P5S8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003222">
        <property type="protein sequence ID" value="PJN92868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8740" checksum="702C6394D23A6644" modified="2018-04-25" version="1" fragment="single">MHALMSKGETPHKLGFIYMLLGDGGASNIDPFAAEETPDNNWIVSGPHVMIVGTEAKSLLEGYPRAAVADPAKPYVMWAGTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V4</accession>
    <name>A0A2M9P5V4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GTP 3',8-cyclase MoaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25530</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003139">
        <property type="protein sequence ID" value="PJN92900.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019008">
        <property type="term" value="C:molybdopterin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010505">
        <property type="entry name" value="Mob_synth_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06463">
        <property type="entry name" value="Mob_synth_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mob_synth_C" evidence="1">
        <location>
            <begin position="3"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92900.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="38" mass="4252" checksum="BE6921640328888A" modified="2018-04-25" version="1" fragment="single">MRVGETGGRIGFITPLTHNFCESCNRVRVTCTGQLYMC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z1</accession>
    <name>A0A2M9P5Z1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003003">
        <property type="protein sequence ID" value="PJN92952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="13"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8650" checksum="72277CF9C5EDE853" modified="2018-04-25" version="1" fragment="single">MDIKGHLQNNWAVGTGLYVNTSDGFTIRDSDMTDFKIAMNIWGTDDVTIEGNSIRRMNHDGLFLGGIDGIKIEDNFIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P636</accession>
    <name>A0A2M9P636_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24490</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002839">
        <property type="protein sequence ID" value="PJN93021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014670537" evidence="1">
        <location>
            <begin position="28"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8055" checksum="662D48BF63DD71D2" modified="2018-04-25" version="1" fragment="single">MKPLLMLAVVGTSMLAGTAGFSQDASAEDLLETLKGVAPADLLQNATLVQVSADGMKTVREGENGWTCMKPGTNPMCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H1</accession>
    <name>A0A2M9P6H1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-hydroxybutyryl-CoA dehydrogenase</fullName>
            <ecNumber evidence="4">1.1.1.157</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_23620</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.157" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01002588">
        <property type="protein sequence ID" value="PJN93110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008691">
        <property type="term" value="F:3-hydroxybutyryl-CoA dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044248">
        <property type="term" value="P:cellular catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006631">
        <property type="term" value="P:fatty acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901575">
        <property type="term" value="P:organic substance catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1040.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006180">
        <property type="entry name" value="3-OHacyl-CoA_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006176">
        <property type="entry name" value="3-OHacyl-CoA_DH_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006108">
        <property type="entry name" value="3HC_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013328">
        <property type="entry name" value="6PGD_dom2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00725">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02737">
        <property type="entry name" value="3HCDH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00067">
        <property type="entry name" value="3HCDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3HCDH_N" evidence="3">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="domain" description="3HCDH" evidence="2">
        <location>
            <begin position="44"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009463"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00725"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF02737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15504" checksum="5DC1A59A1335AFC3" modified="2018-04-25" version="1" fragment="single">PVPVMQLVELIRGIATDEPTYQTLLKVVERLGKTSASAEDFPAFIVNRILVPMINEAVYTLYEGVGTVTSIDTSMKLARTIRWAAGAGGFHRPRHLPRDHERAARGLADTKYRPCPLLVKYVEAGWLGRKTQRGFYDY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N9</accession>
    <name>A0A2M9P6N9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type II toxin-antitoxin system ParD family antitoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002345">
        <property type="protein sequence ID" value="PJN93212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.10.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022789">
        <property type="entry name" value="ParD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038296">
        <property type="entry name" value="ParD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36582">
        <property type="entry name" value="PTHR36582"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03693">
        <property type="entry name" value="ParD_antitoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02606">
        <property type="entry name" value="antidote_CC2985"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1277">Toxin-antitoxin system</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8703" checksum="CECBAD21907D8E64" modified="2018-04-25" version="1">MNVSIGKRWEEFVEGVVQDGRYGSASEVVREGLRLVEEREAKLAALRQTIEASIAEGGARSQEEVGAVLSTKARALASEGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S0</accession>
    <name>A0A2M9P6S0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_22360</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002266">
        <property type="protein sequence ID" value="PJN93251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007452">
        <property type="entry name" value="TamB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04357">
        <property type="entry name" value="TamB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="153"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="153" mass="16263" checksum="A900B40578717F11" modified="2018-04-25" version="1" fragment="single">DRDRADRRRRAGGRVHHAARAAGDPRPAAGFRLGGGLTVTGPIADVVPVGEFTMRRGRLEILGQRLDFDEGSLQLTGNLDPQIRFVAQTRASDVTAYVTVTGRVSSPEISFSSQPALPQDEVLARVIFNRSVSQLSAFQIAQLAAAAAELAGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P716</accession>
    <name>A0A2M9P716_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002150">
        <property type="protein sequence ID" value="PJN93298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8948" checksum="88123D5182526FCA" modified="2018-04-25" version="1" fragment="single">SPWENGYCESFNSKLRDELLNGELFYSLAEARIVIESWRQHYNTLRPHASLGYKPPAPATLLWPGTPTTSTMAAKPTMH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P721</accession>
    <name>A0A2M9P721_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EH_Signature domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_21375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002031">
        <property type="protein sequence ID" value="PJN93364.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028943">
        <property type="entry name" value="EH_Signature_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15611">
        <property type="entry name" value="EH_Signature"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EH_Signature" evidence="2">
        <location>
            <begin position="19"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF15611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93364.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13694" checksum="D20219E59B779156" modified="2018-04-25" version="1" fragment="single">MADRRKYPLLSRRRDDSGESHMWEPRRKFWLGLHEQDRIREAWVAFHPEAERVARRRPVGSSLSFGKQVAGGSRGDTSLLILEFNDFIVVEGSHNYKVHVFDKHNVKTPKLRQSYY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P752</accession>
    <name>A0A2M9P752_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21185</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001987">
        <property type="protein sequence ID" value="PJN93386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6529" checksum="B9D6B2612BD78037" modified="2018-04-25" version="1">MTTNDMLNRIRVLIEEELGEFQLFSELPAAEIDLIADRLTRAIAPVVASESVDADQRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B7</accession>
    <name>A0A2M9P7B7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_20880</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001921">
        <property type="protein sequence ID" value="PJN93427.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="63"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="14"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93427.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9315" checksum="ED313EAD94E2A8AA" modified="2018-04-25" version="1" fragment="single">MIEFLTHNMAPLMFGGLVLFLIIGYPAAFSLAAVGLFFGFIGIEMGLIPPSYLGNLTFQLNSVLTNDLLLAIPLFTFMGTILERSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K2</accession>
    <name>A0A2M9P7K2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nitrate reductase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">narZ</name>
        <name evidence="3" type="ORF">CNY89_20355</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001810">
        <property type="protein sequence ID" value="PJN93499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006655">
        <property type="entry name" value="Mopterin_OxRdtase_prok_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00932">
        <property type="entry name" value="MOLYBDOPTERIN_PROK_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molydop_binding" evidence="2">
        <location>
            <begin position="111"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="21623" checksum="72E1AC9398B98C74" modified="2018-04-25" version="1" fragment="single">ATGRDHTHLAAGKQHEEIRFRDVASQPRKIISSPTWSGIESEEVCYNAGWTNVHELIPWRTLSGRQQLYQDHLWMRAFGEALCVYRPPVDLKTITTEVNRDAAEGEPHVVLNFITPHQKWGIHSTYSDNLLMLTLNRGGPVIWISETDAAKAGIVDNDWVELYNSNGALTARAVVSQRIKEGTTFMYHAQE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P3</accession>
    <name>A0A2M9P7P3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001746">
        <property type="protein sequence ID" value="PJN93545.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014967966" evidence="1">
        <location>
            <begin position="19"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93545.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="5982" checksum="51F5FE5DE1D82E39" modified="2018-04-25" version="1" fragment="single">MSAAALAVMAAAPASAQAIGACLITKTDTNPFFVKMKEGAEAAAAEHGITLKSYAGRIDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V3</accession>
    <name>A0A2M9P7V3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_19415</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001617">
        <property type="protein sequence ID" value="PJN93636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032196">
        <property type="term" value="P:transposition"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017894">
        <property type="entry name" value="HTH_IS21_transposase_type"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50531">
        <property type="entry name" value="HTH_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <keyword evidence="2" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="HTH IS21-type" evidence="5">
        <location>
            <begin position="3"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50531"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="10102" checksum="86846E478D50FD05" modified="2018-04-25" version="1" fragment="single">MALLSVIRRWALRDQLSIREIARRTGLSRNTIRKYLRLGTVQPEFKVPDRPSKLDPYAEKLAAWLKTDAGKSRKQRRTLKQFHADL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V6</accession>
    <name>A0A2M9P7V6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19605</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001657">
        <property type="protein sequence ID" value="PJN93608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3268" checksum="5EAE1761CC5FBA89" modified="2018-04-25" version="1" fragment="single">PRPVDLPVEGAASLKAAVIPVVLHYSTADPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7W3</accession>
    <name>A0A2M9P7W3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19360</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001607">
        <property type="protein sequence ID" value="PJN93646.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="17"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="193"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93646.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="23305" checksum="57635F5AD9124488" modified="2018-04-25" version="1" fragment="single">KRRGRKRATGTRAPILTVAAPNARWSVDFVHDQLACGRRLRILNVVDDVTKECLAAVVDTSISGRRVARELAALVARRGRPGLIVSDHGTEFTSNAMLEWTQKAGIAWHFIAPGKPQQNGICEAFNGRMRDELLNETLFFGLGHARAAVARWVADYNHHRPHSAIGYATPAAYAAQLAAMGDRLRATEALRQSPIAPSAHPRQFDRRTPASGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X0</accession>
    <name>A0A2M9P7X0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001631">
        <property type="protein sequence ID" value="PJN93623.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93623.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8560" checksum="EBE03FAC418D5375" modified="2018-04-25" version="1" fragment="single">MKRSRFTEEQIIGVLREHEAGAVVAELCRKHGLSSATFYAWKAKYGGMDVSEARRLKALEEENTKLKRLYADAML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y1</accession>
    <name>A0A2M9P7Y1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19585</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001650">
        <property type="protein sequence ID" value="PJN93610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="1"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17753" checksum="5D553A7C517F4CC4" modified="2018-04-25" version="1" fragment="single">GGTSSGKTTVARALLSLANRSERLVTIEDARELHLPHENSVTLIAERAESSERTPAKLLVAALRMRPDRLILGEMRGEEALAFLEAINTGHPGSISTIHADSPVLALERLALMVMRVGNRQARRDVLEYAARTIDVIVQVGRRGGRRGVLEVHLPASNLLWVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y5</accession>
    <name>A0A2M9P7Y5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Type II toxin-antitoxin system HipA family toxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001606">
        <property type="protein sequence ID" value="PJN93647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="16676" checksum="DD40627A9B70AA59" modified="2018-04-25" version="1" fragment="single">MALHLVGETIDAKRAHQRAQAGELIQLVRGIYVDDQRDIEATILGHAVRIAHYLYPNAYLSSASAALLAPTPDGRLFISGRRNQRTRLRTLEIIQNEAPKHPSTAIAVIGDDLGELRIDASSPRQRFLEAFRLRSEHASAVTADMRAQMAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y9</accession>
    <name>A0A2M9P7Y9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19400</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001615">
        <property type="protein sequence ID" value="PJN93639.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="1">
        <location>
            <begin position="30"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93639.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15769" checksum="1BE28B867779584D" modified="2018-04-25" version="1" fragment="single">FPLEVRQMLRKYPETGQRRIKWFALDKAAGKLEAEAAAREAYEEAGVRGEVSDRSLGFFPYLKNFGQGRRALCLVRVFPLEVRQMLRKYPETGQRRIKWFALDKAAGKLDEPDLAAMVREFDPDGHAAAPAEPMSEPTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P855</accession>
    <name>A0A2M9P855_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001511">
        <property type="protein sequence ID" value="PJN93727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018770">
        <property type="entry name" value="ChloroindolylP_hydrolase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10112">
        <property type="entry name" value="Halogen_Hydrol"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="12209" checksum="F549573D861160B8" modified="2018-04-25" version="1">MEGRVDRLADQAREVLRAIEADPRDLARSRSFIHVYLRGLRDATVKLADLLARRPDPVAQAQYEALVGDLEQSFATQRAGLLEGNRTDLEVEIEVLRDRLQQDGLVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P875</accession>
    <name>A0A2M9P875_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Phosphatidylethanolamine--Kdo2-lipid A phosphoethanolamine transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_18755</name>
        <name evidence="4" type="ORF">CNY89_25060</name>
        <name evidence="3" type="ORF">CNY89_25430</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003114">
        <property type="protein sequence ID" value="PJN92912.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003010">
        <property type="protein sequence ID" value="PJN92951.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001503">
        <property type="protein sequence ID" value="PJN93735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012549">
        <property type="entry name" value="EptA-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08019">
        <property type="entry name" value="EptA_B_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="domain" description="EptA_B_N" evidence="2">
        <location>
            <begin position="31"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08019"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92912.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92951.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8239" checksum="881E41E9A233B224" modified="2018-04-25" version="1" fragment="single">MAADNRTFWRRAIVIFDESALSLMMFGGAVWALTLFLLTLFGFRWLQKPVAIFVLLLSGATSYFMDALGVMID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D9</accession>
    <name>A0A2M9P8D9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-hydroxybutyrate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001448">
        <property type="protein sequence ID" value="PJN93794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="16765" checksum="5034BE603043EE78" modified="2018-04-25" version="1" fragment="single">MSLSGKVAVITGSNSGIGLGIAEELARQGADIVINSFTDRPEDHALAEQIAGEHGVRAVYIAADMSSGPACRALIAKAHETMGSVDVLVPNAGIQHVSPIDEFAPEMWDRLQAIILGSTFHTTAAALPLMRAAGWGRIVVIASAHGLTASPFKSAYVAAKHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8L6</accession>
    <name>A0A2M9P8L6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001386">
        <property type="protein sequence ID" value="PJN93873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16798" checksum="C02D9C0B762F0E73" modified="2018-04-25" version="1">MPDRPHHAVELPPMVDLDEFRPDRRWPLRMSLGVETGEVLVGWIGEPDPENCVEDFLHAAALVRAEAPRTRFVVVGELGASSPGHTARVHALAAALGLIDSLRFLGHRADVPDLLVAMDVLVSPSCDDGVPQAIAEAGAASLATIVIAGNASSWGSRTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S0</accession>
    <name>A0A2M9P8S0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17465</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001327">
        <property type="protein sequence ID" value="PJN93936.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93936.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8520" checksum="3AA24D7EFE4B7CB9" modified="2018-04-25" version="1">MTLNEFRAWFDGFSEALDGAPTAEQWAKVRAKLAETKDPIAGMFPNAQRGHISGAILGQQVGVNLNPQNIVSGVAAPARN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X1</accession>
    <name>A0A2M9P8X1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001288">
        <property type="protein sequence ID" value="PJN93985.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93985.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9490" checksum="10D5F2C2FE5AB4F4" modified="2018-04-25" version="1">MFNKSEIMKAAWVLVRRANVAKFGLRTVLRNALRNVWRKAKAEAQLAAMRPLTEAAAKIWAIESKDVRLTAADYREIAALRHAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y6</accession>
    <name>A0A2M9P8Y6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17130</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001284">
        <property type="protein sequence ID" value="PJN93993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018060">
        <property type="entry name" value="HTH_AraC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018062">
        <property type="entry name" value="HTH_AraC-typ_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12833">
        <property type="entry name" value="HTH_18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00342">
        <property type="entry name" value="HTH_ARAC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00041">
        <property type="entry name" value="HTH_ARAC_FAMILY_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01124">
        <property type="entry name" value="HTH_ARAC_FAMILY_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH araC/xylS-type" evidence="2">
        <location>
            <begin position="48"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS01124"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16238" checksum="F099E57687BC44C0" modified="2018-04-25" version="1" fragment="single">EARQQALGGPLYVESLARGLIVHLLRRYASIERANRVPAAGLSPRQRRAIVDYVEANLGEALTLEGMGAELGLGACGFSRAFRRSFGMPPYAYVIARRIERARRMLVETTEPIKAIAAACGFTDQAHLTRLFSRELGATPAALRRSIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P901</accession>
    <name>A0A2M9P901_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 7">ATP-dependent Clp protease proteolytic subunit</fullName>
            <ecNumber evidence="5">3.4.21.92</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Endopeptidase Clp</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">clpP</name>
        <name evidence="8" type="ORF">CNY89_16935</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Fourteen ClpP subunits assemble into 2 heptameric rings which stack back to back to give a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 7">Belongs to the peptidase S14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.92" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01001257">
        <property type="protein sequence ID" value="PJN94028.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004176">
        <property type="term" value="F:ATP-dependent peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07017">
        <property type="entry name" value="S14_ClpP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00444">
        <property type="entry name" value="ClpP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001907">
        <property type="entry name" value="ClpP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023562">
        <property type="entry name" value="ClpP/TepA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033135">
        <property type="entry name" value="ClpP_His_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10381">
        <property type="entry name" value="PTHR10381"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00574">
        <property type="entry name" value="CLP_protease"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00127">
        <property type="entry name" value="CLPPROTEASEP"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00382">
        <property type="entry name" value="CLP_PROTEASE_HIS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2 5 8" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0720">Serine protease</keyword>
    <feature type="active site" description="Nucleophile" evidence="5">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <feature type="active site" evidence="5 6">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007039"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003567"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94028.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="22743" checksum="6C8CCBFB9A3568BC" modified="2018-04-25" version="1">MRDMMQLVPMVVEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPRKPIQLYINSPGGVVTSGFAMYDTMRHVRAPVHTLCLGTARSMGSFLLMAGEPGQRAALPNASILIHQPLGGYQGQASDILIHAEETRRVKDRMTRLYAEHCGRSFEAFERAMDRDRFMTAEEALDWGLIDRILTEHEAGAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B2</accession>
    <name>A0A2M9P9B2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">3-phosphoshikimate 1-carboxyvinyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001185">
        <property type="protein sequence ID" value="PJN94123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016765">
        <property type="term" value="F:transferase activity, transferring alkyl or aryl (other than methyl) groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="3">
        <location>
            <begin position="14"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="7654" checksum="D8891FF222BB04BC" modified="2018-04-25" version="1" fragment="single">MSGHGQAQPLTAEANGPLTGVAEIPGDKSVSHRALILGALSVGETRITGLLEGEDVLDTGRAMRAFGAEVTQDGPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H9</accession>
    <name>A0A2M9P9H9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">S-adenosylmethionine tRNA ribosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_15960</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001137">
        <property type="protein sequence ID" value="PJN94193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008616">
        <property type="term" value="P:queuosine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003699">
        <property type="entry name" value="QueA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042118">
        <property type="entry name" value="QueA_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036100">
        <property type="entry name" value="QueA_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30307">
        <property type="entry name" value="PTHR30307"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02547">
        <property type="entry name" value="Queuosine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF111337">
        <property type="entry name" value="SSF111337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-0671">Queuosine biosynthesis</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 5" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022785"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10902" checksum="336849BE0E6459B0" modified="2018-04-25" version="1" fragment="single">RVIPVGTTALRVLETAAAAGHLAPWRGETDIFIRPGHRFRVADGLMTNFHLPKSTLMILAAAFMGLTRIRRVYAHALARDYRFLSYGDASLLLPESRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T6</accession>
    <name>A0A2M9P9T6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">BolA family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BolA/IbaG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001066">
        <property type="protein sequence ID" value="PJN94289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002634">
        <property type="entry name" value="BolA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036065">
        <property type="entry name" value="BolA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01722">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003113">
        <property type="entry name" value="BolA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82657">
        <property type="entry name" value="SSF82657"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU003860"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8693" checksum="D40A50DD52362161" modified="2018-04-25" version="1">MAMEAVEIERLIRDAFPSAEVEITDLAGDGNHYAATVVAAEFRGLNRVKQHQLVYAALQGKMDGSRGELHALALTTRAPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T7</accession>
    <name>A0A2M9P9T7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15365</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001064">
        <property type="protein sequence ID" value="PJN94292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7381" checksum="7FC4D684AB5ABE3E" modified="2018-04-25" version="1">MATYIQDTLDLIDGTVAAYAQTVFTDFGGPVSATIRLGGVVALAFLGINVMMQWVPLRVTDFAKWASAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U7</accession>
    <name>A0A2M9P9U7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001064">
        <property type="protein sequence ID" value="PJN94291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11878" checksum="8871575AC272F357" modified="2018-04-25" version="1">MCKDNLGTLKEIQAEVGGSSGFQKIVSQYVSRWDAQEARRLCSAYAAGEPVAITCLNGQRDWSQIKASIPPDYFGLGNQQLAQANAAEREKGTGYREAMAYCRDVGAIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9U8</accession>
    <name>A0A2M9P9U8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Acetylglutamate kinase</fullName>
            <ecNumber evidence="2">2.7.2.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">N-acetyl-L-glutamate 5-phosphotransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">NAG kinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="primary">argB</name>
        <name evidence="14" type="ORF">CNY89_15245</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamyl 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:14629"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:44337"/>
            <dbReference type="ChEBI" id="CHEBI:57936"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.8"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="10">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.8" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001053">
        <property type="protein sequence ID" value="PJN94313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00196"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003991">
        <property type="term" value="F:acetylglutamate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006526">
        <property type="term" value="P:arginine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04250">
        <property type="entry name" value="AAK_NAGK-C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00082">
        <property type="entry name" value="ArgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004662">
        <property type="entry name" value="AcgluKinase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037528">
        <property type="entry name" value="ArgB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041727">
        <property type="entry name" value="NAGK-C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000728">
        <property type="entry name" value="NAGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00761">
        <property type="entry name" value="argB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="4" id="KW-0055">Arginine biosynthesis</keyword>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="8 14" id="KW-0418">Kinase</keyword>
    <keyword evidence="7" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="13">
        <location>
            <begin position="32"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="275"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021197"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00030178"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00030639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN94313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="275" mass="28354" checksum="3376935A300883DC" modified="2018-04-25" version="1" fragment="single">MENRAAQQGDPLATARTLAEALPYLQRYDGATVVVKFGGHAMGDDDAMDAFARDIVLMKQCNVHPVVVHGGGPMINEMLGRLDIPSSFVNGKRVTDAATVEVVEMVLSGRINKRIVQAINGQGGKAVGLSGKDAQLMVCEKDLGAGGVDLGFVGKPVEVNPAVLRTFLDSDFIPVVAPVGMGRNGETYNVNGDTAAGAIAAAMKADRLVLLTDVSGVKGADGQVLTQLTSDEVRALTASGVIAGGMIPKTETALAAVEGGVRAAVILDGRLPHAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X3</accession>
    <name>A0A2M9P9X3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001042">
        <property type="protein sequence ID" value="PJN94332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.25.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011990">
        <property type="entry name" value="TPR-like_helical_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17919" checksum="8E7421A1C8AC46D6" modified="2018-04-25" version="1" fragment="single">MSKIRGVVNGSEQPRLEAGRERIGLTLTDEEVDLRRIRSALASGALPLGPGPLTEIAEALEQPLLEGLDMPRLDAYQAWLTAERADAAHLRLSALRRLVEHPDTPEIEALAHARAWHDADPFSTDAAAALAARLRRMGRLPEAEAMLDAFRRVAREAGFSADLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA43</accession>
    <name>A0A2M9PA43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001009">
        <property type="protein sequence ID" value="PJN94394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7662" checksum="4F5E5E65196066FF" modified="2018-04-25" version="1">MGSHDARFADAERSFDGFLAALRQKLAAYQTYRRTLGELRALDARSRADIGMDDLAPEVFARAAVYGTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA53</accession>
    <name>A0A2M9PA53_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14720</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001001">
        <property type="protein sequence ID" value="PJN94404.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="71"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="106"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="153"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="197"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="259"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="67"/>
            <end position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94404.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="33233" checksum="958AED75AC6C8897" modified="2018-04-25" version="1">MSGDSRFLGFWYVLPYVLGLLVFTAIPFVASLWLSFTDYRLMQGSEFVGLRNYVDLFTDDRTFTKSLNVTLLYVAMTVPLKLAFALFIAVVLNYKLKGIGFFRTAYYVPSILGGSIAIAVLWRYIFADTGLMNIALTSIGFEAVNWFGNPGTALFTITLLRLWQFGSAMVIFLAALQSIDKSLYEAAAIDGANKWRTFLSITLPLLTPVIFFNLIMQMVQAFQEFNGPYVITNGGPLKSTYLLPLYIYEMAFKKFDMGYASAIAWVLFAIIMVLTVVAFWSSRRWVYYAGDKRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA58</accession>
    <name>A0A2M9PA58_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Endo/exonuclease/phosphatase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14655</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000994">
        <property type="protein sequence ID" value="PJN94416.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036691">
        <property type="entry name" value="Endo/exonu/phosph_ase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005135">
        <property type="entry name" value="Endo/exonuclease/phosphatase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03372">
        <property type="entry name" value="Exo_endo_phos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56219">
        <property type="entry name" value="SSF56219"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Endo/exonuclease/phosphatase" evidence="1">
        <location>
            <begin position="8"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03372"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94416.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12778" checksum="5ED32643E7C5ACA0" modified="2018-04-25" version="1">MAAHLGLLRQSRRKQVERLVAHAAEAADRPTVLMGDLNEWRRERGSSLHGFTPGFGPVGRGTPSFPSYFPLLALDRIIARPGRILGPVEVHMSPLSRRASDHLPIKARVRLRQDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA75</accession>
    <name>A0A2M9PA75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF3008 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14505</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000977">
        <property type="protein sequence ID" value="PJN94436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021553">
        <property type="entry name" value="DUF3008"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11450">
        <property type="entry name" value="DUF3008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="20"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6441" checksum="0588DB9A46E00024" modified="2018-04-25" version="1">MPAKSKAQQKAAGAALSAKRGETGKEDLKGASRHMVDSMSEKDLEDMASTSRKGKPDHVGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB1</accession>
    <name>A0A2M9PAB1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14425</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000968">
        <property type="protein sequence ID" value="PJN94451.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94451.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6881" checksum="9A8E896532547A6E" modified="2018-04-25" version="1">MSPSVIPTLVAQSSHLEDRNLSPILTGIQGVRKASAMIAACIDSARTRGAAARRAMTARESPCGET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAS4</accession>
    <name>A0A2M9PAS4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">C4-dicarboxylate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000851">
        <property type="protein sequence ID" value="PJN94647.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011852">
        <property type="entry name" value="TRAP_TAXI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42941">
        <property type="entry name" value="PTHR42941"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16868">
        <property type="entry name" value="NMT1_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02122">
        <property type="entry name" value="TRAP_TAXI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94647.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="261" mass="27146" checksum="6C3A25410C512CEB" modified="2018-04-25" version="1" fragment="single">KASDGSIANLRDVRSGARTFGIVQSDWLAHAVAGTGLFAGVGAGRDLRAVFGLFREPFTVVARPNAGIADFVDLKDKRVSFGPEGSGGRATMGVVMLALGWTEADFAYVADLPMADTPRALCAGEIDAAIFIVAHPNLTVEKMLACGAAMVPLDAAEIDPLVASNAAYARVEIPAGAYQRQTSAVPTFGPTATLVTSARTPPAVVRTLVTAVFEGLDVFRAAHPVFHDIEPAQMLGPDLVAPLHESVPGALAPERADAPFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB22</accession>
    <name>A0A2M9PB22_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000800">
        <property type="protein sequence ID" value="PJN94737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010292">
        <property type="entry name" value="Uncharacterised_CreA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37952">
        <property type="entry name" value="PTHR37952"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05981">
        <property type="entry name" value="CreA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003174">
        <property type="entry name" value="CreA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014942215" evidence="1">
        <location>
            <begin position="19"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16123" checksum="8E59A4C4498B43D1" modified="2018-04-25" version="1">MRAIWMAAALAVMGGAAASEQIGEVTTAFKILGANHRIVIEAFDDPKVEGVACYVSRARTGGISGSLGLAEDTSDASIACRQVGPVAFRGELEDGEEVFGRRASVLFKRIQVVRFFDKTRNALIYLTYSDRLVDGSPQNSISAVAIQPWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBH2</accession>
    <name>A0A2M9PBH2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11825</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000715">
        <property type="protein sequence ID" value="PJN94881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="49"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7954" checksum="E12BED23DD376E2B" modified="2018-04-25" version="1" fragment="single">MTPVLAMEGVAKTRRDSERAFTLEVPRLTLQAGDRLALVGGERQRKSTRDRRCWRWRRTRTRPGGSRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL0</accession>
    <name>A0A2M9PBL0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">VOC family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11585</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000697">
        <property type="protein sequence ID" value="PJN94918.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="18"/>
            <end position="139"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94918.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15839" checksum="642F2639F88BCF44" modified="2018-04-25" version="1">MTEVASETRSFDPRVMMGVIPYLGMNGRAAEAVGFYAKAFGARELGRFASEDDPNRLIHVQIEVNGGALMMSDMTAPGEPPASPQGFHLQLVVQDGDAWWSRAVAAGCEVVMPFQRMFWGDRFGLMRDPFGLQWAVNEAGAPGVSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW9</accession>
    <name>A0A2M9PBW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000640">
        <property type="protein sequence ID" value="PJN95031.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95031.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14598" checksum="ABADAC488307F429" modified="2018-04-25" version="1">MREDGEVMRDEQEARLDALEAMRAPVYTTEQTAVAGIRVRVDYQGDLQVERTADGFFSRVSAHALTDLLAELLDAGPQDRRIKAFRALRKSEKAAAMERLFLDASYQRVLGVSPKQRQRIADWVPSDAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC01</accession>
    <name>A0A2M9PC01_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Iron-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000618">
        <property type="protein sequence ID" value="PJN95077.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="202"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95077.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21581" checksum="282B03CD44A742CC" modified="2018-04-25" version="1" fragment="single">MSAEACRTGAPEADLLMSSAVDQLVKLVNDGCAQPHRSLQTEALPPSANWRDELFGVTWEPAVIVYNADLVPPAEVPRSRFDLIDLLRPEGSRYAGRVATYDIEASGVGYLFAFVDSQQATTFGSLIEAFGRSGAVATCCSAEIIEAVATGRYLVAYNVLGSYALAQAARDPRISVVAPEDYTLVLRRGVVIPRAARSAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD7</accession>
    <name>A0A2M9PCD7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000548">
        <property type="protein sequence ID" value="PJN95217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="411" mass="46130" checksum="F860DB14B6F28321" modified="2018-04-25" version="1" fragment="single">DGKLYMLPDQQFANLYWFRHDLFSDPALKEQFKAKYGYELGVPVNWSAYEDIARFFSEDVKEVDGKPIFGHMDYGKKDASLGWRYTDAWFSMAGSGDKGLPNGLPVDEWGIRVEDCHPVGSSIERGGDINGPAAVYALDTSIRWLKDYAPAEAQGMTFYEYSPVTANGSIAQQAFWYTAFVADYTKEGMPVVNADGTPKWRVAPSPHGAYWHEGMKLGYQDVGSWLLLNTTPEDRRKAAWLYAQFVTSKTLDVKKSHVGLTFIRDSTVRHESFTERAPMLGGLVEFYRSPARVAWTPTGTNVPDYPKLAQLWWQNISTALSGEATVQQALDGLAEAQDKVMERLERADVQKVCGPKLNPKTSAEEWFAKAEAEGTLAPQRKLENEKPQGETVVYEDLLKAWSDGKVMPDTM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCJ9</accession>
    <name>A0A2M9PCJ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">2,5-didehydrogluconate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09470</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000522">
        <property type="protein sequence ID" value="PJN95269.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827">
        <property type="entry name" value="PTHR43827"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00798">
        <property type="entry name" value="ALDOKETO_REDUCTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="20"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="3">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95269.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="29189" checksum="E4A057936FD0FD9B" modified="2018-04-25" version="1">MQTVTTNGLAIPQLGFGVFRMTEEEVERLVPAALEAGFRHFDTAQIYGNEAALGRALKSAGVSRDEIFLTTKVWVDDYAADRFRPSVEESLDKLQVGQVDLLLLHWPGSPVPLADQIARLNAAQDAGLTRAIGVSNQTVAQMRRSVALSHAPIVTNQVEIHPYLDQTALAAAARELGLALTGYFGMADGAVPADPALREIGAKHGKTAAQVALRWQIEAGHVALSKTASPARLAENIAIFDFALDAGDKARIAALARPDGRIVSPEGLAPAWDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL6</accession>
    <name>A0A2M9PCL6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000521">
        <property type="protein sequence ID" value="PJN95273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="14194" checksum="B30B9A2F50CCABB1" modified="2018-04-25" version="1">MTTAFTPLASFGGGALIGLAAVLLMLALGRIMGATGVLTGAVLPTGPGDRGWRLAVLAGMVSGPLAYRFATGSFPAIDVPVSAPMLVFGGLLVGVGVTLAGGCTSGHGVCGLSRLSPRSFVATGTFMVATFATVYLVRHLIGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCU4</accession>
    <name>A0A2M9PCU4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GpE family phage tail protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000483">
        <property type="protein sequence ID" value="PJN95365.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009493">
        <property type="entry name" value="P2_GpE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06528">
        <property type="entry name" value="Phage_P2_GpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95365.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="38" mass="4502" checksum="793F0EDF58724C27" modified="2018-04-25" version="1">MADIAVVFHWAPSELDRMAPEELARWWGHARRRAPQED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY0</accession>
    <name>A0A2M9PCY0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Transpeptidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08690</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000465">
        <property type="protein sequence ID" value="PJN95405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transpeptidase" evidence="2">
        <location>
            <begin position="31"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="410"/>
            <end position="432"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="415"/>
            <end position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="432" mass="46792" checksum="AA493BABD513E971" modified="2018-04-25" version="1">MWDVGDVILVKQIKGDGGPRWSYRQVPEIQGGFMAMDTETGRVLAMQGGFSYQSSVFNRATQALRQPGSSFKPFVYAAALDNGYSPATIVVDAPIEVLSGGEIWRPQNSNEKFYGPTPMRTGLEQSRNLMTVRIAQEVGMDTVAEYAERFGVYNDMPQLLSYSLGAGETTLFQMVAAYAMFANGGLRVEPTLVDRVQDRYGRTIYRHDERPCESCQAPDISAASQPIVRANAERIMDPITAYQITSMLQGAVARGTGARTVGSLNLNLAGKTGTTNDAKDVWFVGYSPRIAAGCFMGYDTPRPMGDSAFGGTLCAPIFQEFIAEAMKGQGPAKWAVPPGGYFIKVDRRSGQRLADDATGPNVQAEYVRDGQERIGVGEFGQTVDGGWKMGTDVPLFTAGESAAEVERVQVRGQTRALPKNPTRGNLSSGGLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY7</accession>
    <name>A0A2M9PCY7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">4-hydroxy-3-methylbut-2-enyl diphosphate reductase</fullName>
            <shortName evidence="5">HMBPP reductase</shortName>
            <ecNumber evidence="5">1.17.7.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ispH</name>
        <name evidence="6" type="ORF">CNY89_08745</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>H2O + isopentenyl diphosphate + 2 oxidized [2Fe-2S]-[ferredoxin] = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24488"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="ChEBI" id="CHEBI:128769"/>
            <dbReference type="EC" id="1.17.7.4"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>dimethylallyl diphosphate + H2O + 2 oxidized [2Fe-2S]-[ferredoxin] = (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H(+) + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:24825"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57623"/>
            <dbReference type="ChEBI" id="CHEBI:128753"/>
            <dbReference type="EC" id="1.17.7.4"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5">Binds 1 [4Fe-4S] cluster per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from (2E)-4-hydroxy-3-methylbutenyl diphosphate: step 1/1.</text>
    </comment>
    <comment type="pathway">
        <text evidence="5">Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 6/6.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the IspH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.17.7.4" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000471">
        <property type="protein sequence ID" value="PJN95393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00056">
        <property type="reaction ID" value="UER00097"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00059">
        <property type="reaction ID" value="UER00105"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051745">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050992">
        <property type="term" value="P:dimethylallyl diphosphate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019288">
        <property type="term" value="P:isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd13944">
        <property type="entry name" value="lytB_ispH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00191">
        <property type="entry name" value="IspH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003451">
        <property type="entry name" value="LytB/IspH"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30426">
        <property type="entry name" value="PTHR30426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02401">
        <property type="entry name" value="LYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00216">
        <property type="entry name" value="ispH_lytB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 5" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="3 5" id="KW-0408">Iron</keyword>
    <keyword evidence="4 5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="5">
        <location>
            <begin position="227"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="16"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="45"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="100"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="128"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="199"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="272"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="316" mass="34017" checksum="A31899FC40F4D9D1" modified="2018-04-25" version="1">MPDPLTLYLAAPRGFCAGVDRAIKIVEMALEKWGAPVYVRHEIVHNRYVVEGLRAKGAVFVEELADCPPDRPVIFSAHGVAKSVPAEAEARRMVYVDATCPLVTKVHNEAARHHANGLQMVMIGHAGHPETVGTMGQLPEGEVLLVETVEDVAGIAPRDPERLAFITQTTLSVDDTAAIVAALRERFPGILGPAREDICYATTNRQEAVKAIAPKIDALLVIGAPNSSNSLRLVEVGRRAGCAYSQLVQRAADIDWRALQGVRSVGVTAGASAPEELVREVVDAFAARYAVTEIPVETAQERVEFKVPRALREAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD17</accession>
    <name>A0A2M9PD17_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1467 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08480</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000451">
        <property type="protein sequence ID" value="PJN95437.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009935">
        <property type="entry name" value="DUF1467"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07330">
        <property type="entry name" value="DUF1467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95437.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9427" checksum="42C5ED8CD500EF29" modified="2018-04-25" version="1">MNPFSAAVVFAVVWFLTLFVVLPIGLRTQDEAGDVEPGTPASAPSGRIMRRKFLIVTAVALAIWAAICAVIIWGGITIRDLDVWGRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL8</accession>
    <name>A0A2M9PDL8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000371">
        <property type="protein sequence ID" value="PJN95626.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95626.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="15558" checksum="A7119A268FCBA844" modified="2018-04-25" version="1">MDWDALVADFAKVAALAGVALPPGAIEVQHQPAPHVPAALPAGKMAVYVFVEGAAILKVGKAGPKSSARFASQHYGFNAPSTLAKSLIKDGARGLAQDDIGNWMRGNLGRVNFLLPASLGVDVLSLLEAFLHCRLRPVFEGFASQRGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT2</accession>
    <name>A0A2M9PDT2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000337">
        <property type="protein sequence ID" value="PJN95710.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007039">
        <property type="entry name" value="TrbC/VirB2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04956">
        <property type="entry name" value="TrbC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="81"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95710.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10263" checksum="B8CCBDAED64E5FD0" modified="2018-04-25" version="1">MIGVPLPSVLPGARLVWLLLGLFAVAVVVGGPAMAQDLSPIDTFFATLGAALTGTTGRAIGLVALAAVGVMFLFGRMNMGFAVSICVGLVILFGAATILGGFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE03</accession>
    <name>A0A2M9PE03_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Flavodoxin-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_06650</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000320">
        <property type="protein sequence ID" value="PJN95752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004517">
        <property type="term" value="F:nitric-oxide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006809">
        <property type="term" value="P:nitric oxide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001094">
        <property type="entry name" value="Flavdoxin-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008254">
        <property type="entry name" value="Flavodoxin/NO_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044943">
        <property type="entry name" value="NOS_dom_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044940">
        <property type="entry name" value="NOS_dom_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044944">
        <property type="entry name" value="NOS_dom_3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004030">
        <property type="entry name" value="NOS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036119">
        <property type="entry name" value="NOS_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00258">
        <property type="entry name" value="Flavodoxin_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02898">
        <property type="entry name" value="NO_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00369">
        <property type="entry name" value="FLAVODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56512">
        <property type="entry name" value="SSF56512"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50902">
        <property type="entry name" value="FLAVODOXIN_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Flavodoxin-like" evidence="11">
        <location>
            <begin position="544"/>
            <end position="682"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="704" mass="78452" checksum="A9C6E910F0C8D892" modified="2018-04-25" version="1">MARFFALHVAGPMIAHAAAEEAALAEEVVAEMRAGAEAMLAHSQAAGIFFYQTLFRTHPEVLRHFRTADMDMLSRHLIETVVFLSRAATRPKSMRAELRNLGQVHQANQIPVGDYPRLAGPLLETLGAFGTPLTPRTRAGWEVLFARIIRLISEPMAQQEQLIGAAREFLDQVALELDWPQARIDKRWSEVFHEIRATGSYTQTFEEIEHGARIAWRNAPKCIGRISWKNLIVRDRRHVADPDEMFAECVEHLRLATNGGNIEIVLTLFRPTRPGERWGPRIWNSQLIRYAGYRTPDGGVIGDRANLDLTAAIERLGWRPPAEPTDFDVLPLVIDAPGHEPRLYRFDAEDVLEVPITHPSVPAIGALGLKWCAVPAIANFRLDLGGIDYGCFPFNGWFMGTEIARNLWEEKRYDRAEAIAAALGLDTSSEATLWRDRAFLELNVAVVHSFQQARITLVDHQTASRQFMIHDLREKKSGRECPAQWSWIAPAAGGSTTPVWHHETRDFHLTPSYAYAADRWAVTDQDIAPARIAEPAAAVKTRRPLILYASETGTAEGYARQAARRLGGLAPQVLSMDEVDLDQLSRESLVLVVASTCRDGDAPQAGQAFLDWLRARKPGELEGLGFSVLGIGNRIYPKFCAAAVAYDAAFEAAGARRIAKLELADEIAGQSDTVKQWLEMFAKLWSGDASQEAWSRASRCFLCE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE23</accession>
    <name>A0A2M9PE23_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="14">Acetyl-CoA carboxylase carboxyl transferase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_06615</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000317">
        <property type="protein sequence ID" value="PJN95758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009317">
        <property type="term" value="C:acetyl-CoA carboxylase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01395">
        <property type="entry name" value="AcetylCoA_CT_beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034733">
        <property type="entry name" value="AcCoA_carboxyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000438">
        <property type="entry name" value="Acetyl_CoA_COase_Trfase_b_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011762">
        <property type="entry name" value="COA_CT_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041010">
        <property type="entry name" value="Znf-ACC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01039">
        <property type="entry name" value="Carboxyl_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17848">
        <property type="entry name" value="zf-ACC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01070">
        <property type="entry name" value="ACCCTRFRASEB"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00515">
        <property type="entry name" value="accD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50980">
        <property type="entry name" value="COA_CT_NTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="11" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="2" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 14" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="6" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="CoA carboxyltransferase N-terminal" evidence="13">
        <location>
            <begin position="25"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022516"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022832"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025280"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS50980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN95758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="296" mass="32503" checksum="E414DB381976404F" modified="2018-04-25" version="1" fragment="single">MNWISNYVRPKINSLFSRREVPENLWVKCDSCGAMLFHRELEASLQVCTSCGHHMPISPRDRFTALFDGGVFLEVEVPKPLVDPLGFRDQKKYVDRLRDARKATAAEEAMLVVEGEIAKLRVVAAAQDFSFMAGSMGMHVGNAIVAAAERAVKLKAPLVLFSAAGGARMQEGILSLMQMPRTTVAVQILKEARLPYVVVLTHPTTGGVTASYAMLGDVQIAEPNALICFAGPRVIEQTIRETLPEGFQRAEYLLEHGMLDRVTPRKAIRGELASLLRLLMGLPAPVQGELTVQQPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE57</accession>
    <name>A0A2M9PE57_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000300">
        <property type="protein sequence ID" value="PJN95802.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00507">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNHc" evidence="1">
        <location>
            <begin position="85"/>
            <end position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95802.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="189" mass="21672" checksum="73245D411D432545" modified="2018-04-25" version="1">MPSFIRNPAGLRDHPALVLNADFRPLSYLPLSLWPWQEAVKAAFLDRVSVLAEYDAVVRSPRLEFRIPSVVVLRDYVKPAKASAFTRFNLFLRDEFTCQYCGAKDHLTFDHVVPRSRGGRTTWENVVAACGPCNLHKGSRTLKQAGLNLRRKPVRPTPEQLQNVGRKFPPNHLHDSWMDYLYWDAELDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE88</accession>
    <name>A0A2M9PE88_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05980</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000279">
        <property type="protein sequence ID" value="PJN95865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13517" checksum="8ACC9638A98F7B93" modified="2018-04-25" version="1">MSDELSIAEMKRLADEADERAVSARIAAREARDAYKAGLVAAKAAEVTAAGIEVGVTPLKLFCNRWGMGEQETPGGPFFLIGIEARDYGVVDLIFAKAKKDGSPSKAKSLVWWDRYEPATPDRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA6</accession>
    <name>A0A2M9PEA6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06060</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000283">
        <property type="protein sequence ID" value="PJN95853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014747798" evidence="1">
        <location>
            <begin position="21"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="domain" description="NMT1" evidence="2">
        <location>
            <begin position="42"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="335" mass="35198" checksum="90AED9371CF714BF" modified="2018-04-25" version="1">MLRLISICAVAALLALPAAAKPFRLIVTDMEMPLVPNSVMELAEQEGYFDRAGVEVEFVRVQQTPLAMAAMRSGEGEMANVALESLLRATVEGATDLRAVMSPNRALPYLVAARSDVAAPADLAGKRFGIGRIGSVDHLLSMKVLEEAGVDPATLQLVALGQPQARATALLAGQIDATTIGIGTFAAIDDDPNVSTLIGVDAFWRAAPVLSKVNAVRRDTLAERGPEVQAVIEAITLAARDFAAHPDHWIAAMKKARPDVPEADLEMLAAAFAGQWSVDGGMTEAELAAAQDWLLTGEDFQGVAAQPIAAWADLGPITAVLAKLGPIDPATLPTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG4</accession>
    <name>A0A2M9PEG4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000250">
        <property type="protein sequence ID" value="PJN95941.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95941.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12795" checksum="BD2A84F399A9382D" modified="2018-04-25" version="1">MFDRLTPEKWRAIMPESVARYETLNPEPDFPALTGHVRALWLSEGPDAYPGDGVSGITAPVLLIRGDEDRVVARVETAILADLIPGARLLNLPWAGHEAQADAPEAVAAILLRFLAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK6</accession>
    <name>A0A2M9PEK6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">MerR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05260</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000237">
        <property type="protein sequence ID" value="PJN95981.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015358">
        <property type="entry name" value="Tscrpt_reg_MerR_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00376">
        <property type="entry name" value="MerR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09278">
        <property type="entry name" value="MerR-DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00552">
        <property type="entry name" value="HTH_MERR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95981.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16578" checksum="78D81A046CAA67C6" modified="2018-04-25" version="1">MITIGKLSEATGVKIPTIRYYEQIGLLPEPDRSGGNQRLYGRTQQERLAFIRHARDLGFPLQAIRELLSLSDDPDQSCAAIDEIAQRQLATVNSRIARLTALRSELERMLDQCVRGRVADCRVIEMLGTREFCTCRPISEDADVSGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES6</accession>
    <name>A0A2M9PES6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Diguanylate cyclase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000226">
        <property type="protein sequence ID" value="PJN96012.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd01948">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.450">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001633">
        <property type="entry name" value="EAL_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035919">
        <property type="entry name" value="EAL_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00563">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00052">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141868">
        <property type="entry name" value="SSF141868"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50883">
        <property type="entry name" value="EAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EAL" evidence="1">
        <location>
            <begin position="22"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96012.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="299" mass="32816" checksum="E6F21AD6BE19ACA4" modified="2018-04-25" version="1" fragment="single">QETGPSNIRWFSESLRAEASRRAKIFAEMLAGLDRGEFVPFFQPQIDLATGGFSGFEALVRWRHPDHGLLAPGAFLDFAEAADLTERMGEAVLSQSLAALTAWDAAGLNVPKVGVNFAMAQLRDPRLIEKIKWEVERHDVEPSRVAIEVLETVLIKSDEDLMVRNLRGLASAGFQIELDDFGTGHASIQNLRRLMVHRIKIDRSFVQGIETSAEQRTLTASMIAMARALGIRTLAEGVETPQAAAALRGLGCDHAQGFAIARPMSREETFGWLQGFAGFRPAETAAEVEAPREAPRARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEW6</accession>
    <name>A0A2M9PEW6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HWE_HK domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04750</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000207">
        <property type="protein sequence ID" value="PJN96068.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004673">
        <property type="term" value="F:protein histidine kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011102">
        <property type="entry name" value="Sig_transdc_His_kinase_HWE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07536">
        <property type="entry name" value="HWE_HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00911">
        <property type="entry name" value="HWE_HK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HWE_HK" evidence="2">
        <location>
            <begin position="150"/>
            <end position="232"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96068.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="342" mass="37537" checksum="FE8993F5B3DC8D8E" modified="2018-04-25" version="1">MRQSARSSSADNMPASSESLNNRTQTLLRGIRSSGLCVVYHAADLTIRVIENPPASWPATELVLERGYAAVFDAFTSQRIRAAKQEVLATGAAHRLEAPQHREGEQPLWFELSIERDEDDTGEGRGLFISIVDVSHAKRREAALRELLYEVSHRSRNLLAILQSILGQTAQKAATVAEFEEKFRGRIAALALSQDLITFTNWQGVRLHRLVQAQTEAYHADGPVPVEIQGADPMLGPNSALHVGLALHELAANSRATGVLGEEKGRIVVRFSALPHGKRIEWIEEAAFPPIPVEAWGFGRTILQHVVPRALRGEASYVIDDKGVRYVLDLPASDPEISESGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY5</accession>
    <name>A0A2M9PEY5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DNA topoisomerase 4 subunit B</fullName>
            <ecNumber evidence="6">5.6.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Topoisomerase IV subunit B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 8" type="primary">parE</name>
        <name evidence="8" type="ORF">CNY89_04735</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="6">Heterotetramer composed of ParC and ParE.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type II topoisomerase GyrB family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the type II topoisomerase family. ParE type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000206">
        <property type="protein sequence ID" value="PJN96072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007059">
        <property type="term" value="P:chromosome segregation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.670">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00938">
        <property type="entry name" value="ParE_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002288">
        <property type="entry name" value="DNA_gyrase_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001241">
        <property type="entry name" value="Topo_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013759">
        <property type="entry name" value="Topo_IIA_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013506">
        <property type="entry name" value="Topo_IIA_bsu_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018522">
        <property type="entry name" value="TopoIIA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005737">
        <property type="entry name" value="TopoIV_B_Gneg"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00204">
        <property type="entry name" value="DNA_gyraseB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00986">
        <property type="entry name" value="DNA_gyraseB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00433">
        <property type="entry name" value="TOP2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01055">
        <property type="entry name" value="parE_Gneg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00177">
        <property type="entry name" value="TOPOISOMERASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 6 8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="7">
        <location>
            <begin position="442"/>
            <end position="556"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="17"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="57"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="126"/>
            <end position="132"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="363"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="site" description="Interaction with DNA" evidence="6">
        <location>
            <position position="476"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with DNA" evidence="6">
        <location>
            <position position="528"/>
        </location>
    </feature>
    <feature type="site" description="Interaction with DNA" evidence="6">
        <location>
            <position position="644"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="662" mass="72514" checksum="8E294E96837E0325" modified="2018-04-25" version="1">MAHAPDLFGDDPASGGYDASSIEVLEGLEPVRKRPGMYIGGTDERALHHLVAEVLDNSMDEAVAGHATRIELELHADHSVTVRDNGRGIPVDPHPRFPDKSALEVILCTLHAGGKFSGKAYQTSGGLHGVGVSVVNALSDRLRVEVARGRQLWAQEFSRGLPQGPLQALGATPNRRGTTVTFHPDPEIFGPDPRFRPARLLRMVRSKAYLFSGVEIRWRCDPSCIASGDDTPEQAVFHFPGGLADYLRERLEGADTYADKAFAGKVEFAERFGEGTIGSVEWAINWTPQHDPFVSSYCNTIPTPEGGTHEAGFWAAVLKGVRAYGELASNRKAALITRDDVAAGACAMISVFIRDPEFVGQTKDRLSTQEAARLVEGAVRDRFDTWLASDTRTAGAILDYLVLKAEERLKRRAEKETARKTPVKKLRLPGKLADCSSGRDGSELFLVEGDSAGGSAKQARDRRTQAVLPLRGKILNVLGAASSKMTANQELSDLCLAMGVTSGSRFNVEDLRYDKIIIMTDADVDGAHIAALLMTFFFTQMRGLIEHGRLYLAAPPLFRLTQGAKSVYARDEAERDRWLAKGLGGRGGKVEVSRFKGLGEMMPAQLKETTMSPATRTLIRVRIEEGEETGDLVERLMGKRPEMRFQYIQQHAKFVDAEDLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF23</accession>
    <name>A0A2M9PF23_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Urease subunit alpha</fullName>
            <ecNumber evidence="5">3.5.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Urea amidohydrolase subunit alpha</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5 13" type="primary">ureC</name>
        <name evidence="13" type="ORF">CNY89_04315</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="5 10">
            <text>2 H(+) + H2O + urea = CO2 + 2 NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:20557"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16199"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5 7 10">
            <name>Ni cation</name>
            <dbReference type="ChEBI" id="CHEBI:25516"/>
        </cofactor>
        <text evidence="5 7 10">Binds 2 nickel ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 5">Nitrogen metabolism; urea degradation; CO(2) and NH(3) from urea (urease route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Heterotrimer of UreA (gamma), UreB (beta) and UreC (alpha) subunits. Three heterotrimers associate to form the active enzyme.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="PTM">
        <text evidence="6">Carbamylation allows a single lysine to coordinate two nickel ions.</text>
    </comment>
    <comment type="PTM">
        <text evidence="5">Carboxylation allows a single lysine to coordinate two nickel ions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5 11">Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.1.5" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000184">
        <property type="protein sequence ID" value="PJN96143.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00258">
        <property type="reaction ID" value="UER00370"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016151">
        <property type="term" value="F:nickel cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009039">
        <property type="term" value="F:urease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043419">
        <property type="term" value="P:urea catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00375">
        <property type="entry name" value="Urease_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01953">
        <property type="entry name" value="Urease_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006680">
        <property type="entry name" value="Amidohydro-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011059">
        <property type="entry name" value="Metal-dep_hydrolase_composite"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011612">
        <property type="entry name" value="Urease_alpha_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017950">
        <property type="entry name" value="Urease_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005848">
        <property type="entry name" value="Urease_asu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017951">
        <property type="entry name" value="Urease_asu_c"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029754">
        <property type="entry name" value="Urease_Ni-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01979">
        <property type="entry name" value="Amidohydro_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00449">
        <property type="entry name" value="Urease_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01752">
        <property type="entry name" value="UREASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51338">
        <property type="entry name" value="SSF51338"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01792">
        <property type="entry name" value="urease_alph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01120">
        <property type="entry name" value="UREASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00145">
        <property type="entry name" value="UREASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51368">
        <property type="entry name" value="UREASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 5 9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 5 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 5 7" id="KW-0533">Nickel</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Urease" evidence="12">
        <location>
            <begin position="131"/>
            <end position="570"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="5 8 9">
        <location>
            <position position="322"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="138"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" description="via carbamate group" evidence="5 7">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5 9">
        <location>
            <position position="221"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="248"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="274"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5 7">
        <location>
            <position position="362"/>
        </location>
        <ligand>
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="modified residue" description="N6-carboxylysine" evidence="5 6">
        <location>
            <position position="219"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004897"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022596"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR611612-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR611612-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR611612-52"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU000510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="RuleBase" id="RU004158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96143.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="570" mass="60356" checksum="CB255D183A31B4BB" modified="2018-04-25" version="1">MPHVISRAAYAAMYGPTTGDRLRLADTDLIVEVERDLTVYGEEVKFGGGKVIRDGMGQSQASRAEGAVDTVVTNALILDWTGIYKADVGLRDGRIHAIGKAGNPDTQPGVTIVVGPGTEVIAGEGRILTAGGFDSHIHFICPQQVEDALHSGVTTLLGGGTGPAHGTLATTCTPGPWHIGRMLQAVDGIPVNIGIAGKGNASKPAALEEMVRAGACALKLHEDWGTTPAAIDCCLTVADAMDVQVMIHTDTLNESGFVEDTIRAIAGRTIHAFHTEGAGGGHAPDIIKVAGLPNVIPSSTNPTRPYTANTIEEHLDMLMVCHHLSKSIPEDVAFAESRIRRETIAAEDILHDMGAFSIISSDSQAMGRIGEVAIRTWQTAHKMKLQRGRLSQETGDNDNLRVRRYVAKYTINPAVAHGVSAHVGSIEVGKRADLVLWSPAFFGVKPEMVLVGGVIAVAQMGDPNASIPTPQPVYSRPMWGAYGRALTAGPVTFVSAAALADGIGERLGLQKSLLAVENVRGGIGKAAMKLNDATPDIEVDPETYEVRADGELLTCEPAEELPMAQRYFLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF33</accession>
    <name>A0A2M9PF33_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HXXEE domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000181">
        <property type="protein sequence ID" value="PJN96153.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025671">
        <property type="entry name" value="HXXEE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13787">
        <property type="entry name" value="HXXEE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="74"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="135"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="159"/>
            <end position="178"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96153.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="20883" checksum="3251312B2C28862A" modified="2018-04-25" version="1">MTRLGRLQANWVYGGFLAGLTLLALTPLLLGGWDRAAVLAFLALPVYMLHQYEEHDDDRFHRFVVAHLGHGRDVLPTPAIFLINLVGVWVVMVAVLWLARRLDPGFGVVAGYLLLVNAVVHVIAAAALRGYNPGLVTGVAVFVPLGIAILATSPAGLGLHLFGLALIVGLHAAIVLTARRNLGRAPLYHPISSNGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF79</accession>
    <name>A0A2M9PF79_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">C4-dicarboxylate transport protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dctA</name>
        <name evidence="10" type="ORF">CNY89_04130</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000176">
        <property type="protein sequence ID" value="PJN96172.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006835">
        <property type="term" value="P:dicarboxylic acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01300">
        <property type="entry name" value="C4_dicarb_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023954">
        <property type="entry name" value="C4_dicarb_transport"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018107">
        <property type="entry name" value="Na-dicarboxylate_symporter_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00713">
        <property type="entry name" value="NA_DICARBOXYL_SYMP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00714">
        <property type="entry name" value="NA_DICARBOXYL_SYMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 9" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0769">Symport</keyword>
    <keyword evidence="5 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="40"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="76"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="150"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="180"/>
            <end position="204"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="224"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="297"/>
            <end position="317"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="324"/>
            <end position="344"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="350"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01300"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96172.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="437" mass="46214" checksum="C0E94BD0D912E9B7" modified="2018-04-25" version="1">MSRFLKSLFGQVMVALLLGVLAGVFFPEFAAGLKPLGDGFIRLIKVVIAPLVFGVVVHGIAGAGDLRKVGRVGVKSIVYFEFVTTLALILGLVVAYVFGPGHGMNVDPASLDASAMGTYAERAQNIGGPVDFLMHVIPTTLVGAFAEGDILQVLVIAVAFGAGLSLLGERGKPVAHMIELVTDVLFKIIGFIVRLAPIGVFGAIAYTVGRYGVGSLQQLGYLVVLYYLTVVFFVVGILGLILRLAGFSIFKFLRYMREELMIVLGTASSDSVLPQVMRKLERMGIKDTTVGLVIPTGYSFNLDAFSIYLTLATVFIAQATNTPLAFGDLILILGVALLTSKGAHGIPGSAIVVLAATLSAVPVIPVIGLVLVLSVDWFMGMARALGNLTGNCIATVVIAVWEGDIDRAQAHRVLNGEVEPEEIWDADEEDAAAPRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC7</accession>
    <name>A0A2M9PFC7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Flagellar basal-body rod protein FlgG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5 6">Distal rod protein</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">flgG</name>
        <name evidence="9" type="ORF">CNY89_03755</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="6">The basal body constitutes a major portion of the flagellar organelle and consists of four rings (L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 6">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000157">
        <property type="protein sequence ID" value="PJN96241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009426">
        <property type="term" value="C:bacterial-type flagellum basal body, distal rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012834">
        <property type="entry name" value="FlgG_G_neg"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02488">
        <property type="entry name" value="flgG_G_neg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="9" id="KW-0966">Cell projection</keyword>
    <keyword evidence="9" id="KW-0969">Cilium</keyword>
    <keyword evidence="9" id="KW-0282">Flagellum</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="7">
        <location>
            <begin position="4"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="8">
        <location>
            <begin position="183"/>
            <end position="259"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00017948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00032912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="261" mass="27524" checksum="83FC761B7FE537E0" modified="2018-04-25" version="1">MRALNIAATGMAAQQMRVEVISHNLANMNTTAYNARRAEFADLHYQQVDRPGTINSADGAVLPAGVQLGLGVRAASVSVQIDQGTLAETGGALDLAVEGHGYLEITLPSGEPGYTRDGALKRNGDGLIVTSDGYAVAPEITIPEDAKDVTINADGEIYAYFETQTEAQLLGQLQLVTFVNEKGLEAMGSNLYRETEASGAANVGAAGEDGRGTFRQGYLENSSVDAVREITGLIEAQRGYELNAKVITAADQMLAATTQVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD1</accession>
    <name>A0A2M9PFD1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">RNA polymerase sigma factor RpoD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_03650</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000152">
        <property type="protein sequence ID" value="PJN96255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.220.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009042">
        <property type="entry name" value="RNA_pol_sigma70_r1_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007127">
        <property type="entry name" value="RNA_pol_sigma_70_r1_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042189">
        <property type="entry name" value="RNA_pol_sigma_70_r1_1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03979">
        <property type="entry name" value="Sigma70_r1_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00140">
        <property type="entry name" value="Sigma70_r1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sigma70_r1_1" evidence="3">
        <location>
            <begin position="26"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r1_2" evidence="2">
        <location>
            <begin position="118"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="195"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00140"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF03979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="221" mass="24058" checksum="FE9BE2A876B11C44" modified="2018-04-25" version="1" fragment="single">MAAKDTDSKKPEDNQEATGSSMLDMSQAAVKKMIATAKTRGYITLDELNQVMPSEQVTSEQIEDVMSMLSEMGINVIESDEADDEDRPEPAEVESESSGSRELTMTTVGGEALDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRNTMILGLCESPLTFQAITIWREELLDEAVMLRDVIDLETTFGQSMETDDVESVLGSMPDLPAGDVSPAAPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF1</accession>
    <name>A0A2M9PFF1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03700</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000155">
        <property type="protein sequence ID" value="PJN96242.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96242.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14926" checksum="69AF605C5B3F4590" modified="2018-04-25" version="1">MVESESPQLDIIFHALGDATRRRMLRDLAEGERSVTELARPFAMSLAAASKHVKVLETAGLIRREIRWRTHVCRLEPGPLARAQDWLGFYERFWTDRLGDLDRLLREEDAAPRQTSETPSDPKPTEGETR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ4</accession>
    <name>A0A2M9PFJ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L4</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplD</name>
        <name evidence="7" type="ORF">CNY89_03315</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Forms part of the polypeptide exit tunnel.</text>
    </comment>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the universal ribosomal protein uL4 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96315.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01328_B">
        <property type="entry name" value="Ribosomal_L4_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002136">
        <property type="entry name" value="Ribosomal_L4/L1e"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023574">
        <property type="entry name" value="Ribosomal_L4_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013005">
        <property type="entry name" value="Ribosomal_uL4/L1e"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10746">
        <property type="entry name" value="PTHR10746"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00573">
        <property type="entry name" value="Ribosomal_L4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52166">
        <property type="entry name" value="SSF52166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03953">
        <property type="entry name" value="rplD_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="67"/>
            <end position="96"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010528"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96315.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="22485" checksum="56563709C3288253" modified="2018-04-25" version="1">MKTQVIKLDASEAGEIELDDAIFGLEPRADILHRMVRWQLAKRQAGTHSVLGKSDVSYSTKKIYRQKGTGGARHGSRKAPIFRHGGTYKGPTPRSHAHDLTKKFRALGLRHALSAKAGSGALVVIETADLAEGKTKVLAQTLKNLGWKRALVIDGAEVNENFARAARNIADLDVLPSMGANVYDILRRDTLVLTRSAVEALEARLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ5</accession>
    <name>A0A2M9PFJ5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 6 9">50S ribosomal protein L22</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rplV</name>
        <name evidence="10" type="ORF">CNY89_03295</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="5">This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="function">
        <text evidence="6 9">This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6 8">Part of the 50S ribosomal subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6 7">Belongs to the universal ribosomal protein uL22 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96311.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00336">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01331_B">
        <property type="entry name" value="Ribosomal_L22_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001063">
        <property type="entry name" value="Ribosomal_L22"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036394">
        <property type="entry name" value="Ribosomal_L22/L17_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005727">
        <property type="entry name" value="Ribosomal_L22_bac/chlpt-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13501">
        <property type="entry name" value="PTHR13501"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00237">
        <property type="entry name" value="Ribosomal_L22"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54843">
        <property type="entry name" value="SSF54843"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01044">
        <property type="entry name" value="rplV_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 6 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="6 8" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 8" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009451"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01331"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96311.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14057" checksum="105F1C2496CC9255" modified="2018-04-25" version="1">MGKEKNPRRVADNEAFAVSKMLRTSPQKLNLVAALIRNKPVDKALADLTFSKKRVSDAVKKTLQSAIANAENNHGLDVDELVVAEAYVGKNMVLKRGRPRARGRFGKILKPFSQVTIKVRQTSEETA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM2</accession>
    <name>A0A2M9PFM2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03100</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C56 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000124">
        <property type="protein sequence ID" value="PJN96346.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006286">
        <property type="entry name" value="C56_PfpI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002818">
        <property type="entry name" value="DJ-1/PfpI"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42733">
        <property type="entry name" value="PTHR42733"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01965">
        <property type="entry name" value="DJ-1_PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01382">
        <property type="entry name" value="PfpI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51276">
        <property type="entry name" value="PEPTIDASE_C56_PFPI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DJ-1_PfpI" evidence="2">
        <location>
            <begin position="8"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96346.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="185" mass="20210" checksum="A3E0DE6B7EF2B531" modified="2018-04-25" version="1">MTNIADARVAILATHGYERSELREPLEKLRADGASVEVIAPDAGEIRSWDENDWGDSVPVDRTLSDARVEDYDALILPGGQINPDRLRIEPTAVRFVQDFVRSGKIVAAICHGPWLLVEADAVRGRDVTSYPSIRTDLLNAGANWTDVEVATDAGIVTSRNPGDLPAFIAKIVEEIVEGRHERAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN8</accession>
    <name>A0A2M9PFN8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03035</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000120">
        <property type="protein sequence ID" value="PJN96355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045621">
        <property type="entry name" value="BPD_transp_1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19300">
        <property type="entry name" value="BPD_transp_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="9"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="118"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="153"/>
            <end position="177"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="197"/>
            <end position="217"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="259"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="304"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="114"/>
            <end position="323"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="337" mass="38110" checksum="09016BF639F376CF" modified="2018-04-25" version="1">MFTYTLRRLLFAIPTLLVISFIIFALLDLSPGDPTANLPLTIPAEVREQIRKALGLGEPFHVRYLLWLQQFFVNEPLNILERLTGWTIGDSANRMRVISWQTRSPVVDIIVQRLPQTLWVVGLSYLFGVMIAIPIGVISAYRQYSWFDQIGTFLSMVGFSVPTFFAGLVLIIVFSVHLGWLPSIYDTNLRVTSWATFWLQVKQMIMPVTVLALYNASQISRFMRASMLDNLNQDYVRTARAKGMTERVVVLVHVLRNSLIPVVTVIALGIPNIFSGAIITEQIFRVNGLGQLLITGVQAADLPLVQTLTFIFAFLIVAFNLIADLLYGMLDPRIRYE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR3</accession>
    <name>A0A2M9PFR3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000111">
        <property type="protein sequence ID" value="PJN96386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8672" checksum="76C4CD32E2F72F75" modified="2018-04-25" version="1">MPVKLLGVACAIAWIALCRVLLGAEGTVQDPTGDGLVTRSVRAWANDGAAMSAFAIVALVITYGGALLIVRYVFKKASGGQTHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW0</accession>
    <name>A0A2M9PFW0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phosphate acetyltransferase</fullName>
            <ecNumber evidence="3">2.3.1.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02640</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the phosphate acetyltransferase and butyryltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.8" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000102">
        <property type="protein sequence ID" value="PJN96426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008959">
        <property type="term" value="F:phosphate acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012147">
        <property type="entry name" value="P_Ac_Bu_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002505">
        <property type="entry name" value="PTA_PTB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01515">
        <property type="entry name" value="PTA_PTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000428">
        <property type="entry name" value="P_Ac_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PTA_PTB" evidence="2">
        <location>
            <begin position="87"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="319" mass="33150" checksum="49BE08A9373F4E1D" modified="2018-04-25" version="1">MAEQNGTVAAPRKYDLLIEQVQAMDPVPTAVAHPCSPGALEGATDAAEMGIIVPILVGPRAKIEATAAAAGIDISPYEIVDAAHSHDSAEKAVALVREGRAVALMKGSLHTDELLAAVVRRDTGLRTERRLSHCFLMDVPGHDHVLTITDAAINIFPTLEDKVDIVQNAIDLSHAMGNEAPRVAILSAMETVNPKVPSTVEAAALCKMADRGQITGGLLDGPLAFDNAISPEAAAIKGIGGPVAGQADILVVPDLEAGNMLAKSLSFLMNADSAGIVLGARAPIVLTSRADSVQSRLASCAVAAMIVDHRRRKAQIVAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX2</accession>
    <name>A0A2M9PFX2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Heme ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02600</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000101">
        <property type="protein sequence ID" value="PJN96428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="210"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23862" checksum="5EFF60EDD836F0D2" modified="2018-04-25" version="1" fragment="single">QSELLEVLAGYAPATSGTVTLLDQPLDVSRATNAEDRRTRRVAHVPEDRHRRGLVMPFAEWENSCFGYHREARLQGPMSTLDRTAIRDLARAAIERFDIRPPSCDLKTANFSGGNQQKIVLAREIEREPDVLLIGQPTRGVDIGAIEFIHREIVALRDRGKAIILVSVELDEIQALADRILVMFDGAVSGTRLASETDERELGLLMAGVDPKAQAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ6</accession>
    <name>A0A2M9PFZ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Tat pathway signal protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000091">
        <property type="protein sequence ID" value="PJN96463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1380.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010275">
        <property type="entry name" value="DUF882"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009045">
        <property type="entry name" value="Hedgehog_sig/DD-Pept_Zn-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR37425">
        <property type="entry name" value="PTHR37425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05951">
        <property type="entry name" value="Peptidase_M15_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55166">
        <property type="entry name" value="SSF55166"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="185" mass="20849" checksum="E85F2C722BE55490" modified="2018-04-25" version="1">MNAENFRPTRRALLGIMAGLATVAAAPTFAKAPGLLRGAGDFRRIRMTNQRTGESLDTVYYANRKYIPEALTEISFFMRDWRENEVRKYDPRNVDILATTLRMMDTTEPYLVISGYRTAKTNRMLRGAARDSYHIKAMAADVRLKSRSVSKIYKSAMACDAGGVGFYGRSNFVHMDCGPVRTWNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG34</accession>
    <name>A0A2M9PG34_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000085">
        <property type="protein sequence ID" value="PJN96482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014961539" evidence="2">
        <location>
            <begin position="20"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="63"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10095" checksum="3F26FD46D7A35F99" modified="2018-04-25" version="1">MIRSLAIAAALAAASTATAQTPYIVSPGGQYLGELNSNQYSPNSVANPYGRYGSQYSPDSINNPYGRYGSQYSNESANNPYATSPPIIIQRNGGW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG70</accession>
    <name>A0A2M9PG70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000074">
        <property type="protein sequence ID" value="PJN96522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9811" checksum="8FEF00D87923218A" modified="2018-04-25" version="1">MRQRGFRNTDVSLVLSVATRVADDAFFLSDKDAVREIERRRHEIQQLERLRGTKLVVDGEDVITLYHSDRKPSQADSGKRRRRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG87</accession>
    <name>A0A2M9PG87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000067">
        <property type="protein sequence ID" value="PJN96558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6454" checksum="879DEC85A4985EC6" modified="2018-04-25" version="1" fragment="single">MQRVLLEFDARDGEVFEMAEAAARSQAEAERQAIPYLDALAGLGIGLIGAAPVPMLIGPEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG98</accession>
    <name>A0A2M9PG98_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Twin transmembrane helix small protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01745</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000063">
        <property type="protein sequence ID" value="PJN96575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007667">
        <property type="entry name" value="Hypoxia_induced_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04588">
        <property type="entry name" value="HIG_1_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51503">
        <property type="entry name" value="HIG1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="domain" description="HIG1" evidence="2">
        <location>
            <begin position="1"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7242" checksum="2EA44EBD5F8C9223" modified="2018-04-25" version="1">MASDPLFYLVVVACLAVVVVLMIGVLGFARGGDFNKKHANKIMRLRLLLQFVAVLLILAFVYFSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG5</accession>
    <name>A0A2M9PGG5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peripla_BP_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000054">
        <property type="protein sequence ID" value="PJN96612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_3" evidence="1">
        <location>
            <begin position="4"/>
            <end position="93"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10170" checksum="517DB6C7F237A2E1" modified="2018-04-25" version="1">MPDRPDILICGQDIIAMEVYFALARAGLAVGRDIGVASFDNQAPLPDHLKPELSTVALPYYEMGRAAMRAACADPPETPRLTRLAGGLILRESF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL3</accession>
    <name>A0A2M9PGL3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glyoxalase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01155</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000040">
        <property type="protein sequence ID" value="PJN96666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="1">
        <location>
            <begin position="5"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15150" checksum="D6FB024345BB74A8" modified="2018-04-25" version="1">MFPKSITLITLGVADLDRARAFYAALGWKAEEAGEGVVFIRLAGQILALFGIADLAEDQARPRETLGTGAMTLARNFATEAEVDAAFELALTAGATALKRPEKVFWGGYSGYFTDPDGHVWELAMNPFWPLAADGTLAPAAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN7</accession>
    <name>A0A2M9PGN7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glycine dehydrogenase (aminomethyl-transferring)</fullName>
            <ecNumber evidence="2">1.4.4.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01065</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>(R)-N(6)-lipoyl-L-lysyl-[glycine-cleavage complex H protein] + glycine + H(+) = (R)-N(6)-(S(8)-aminomethyldihydrolipoyl)-L-lysyl-[glycine-cleavage complex H protein] + CO2</text>
            <dbReference type="Rhea" id="RHEA:24304"/>
            <dbReference type="Rhea" id="RHEA-COMP:10494"/>
            <dbReference type="Rhea" id="RHEA-COMP:10495"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:83099"/>
            <dbReference type="ChEBI" id="CHEBI:83143"/>
            <dbReference type="EC" id="1.4.4.2"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.4.4.2" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000036">
        <property type="protein sequence ID" value="PJN96691.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004375">
        <property type="term" value="F:glycine dehydrogenase (decarboxylating) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006546">
        <property type="term" value="P:glycine catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00613">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020581">
        <property type="entry name" value="GDC_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11773">
        <property type="entry name" value="PTHR11773"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02347">
        <property type="entry name" value="GDC-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00033655"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96691.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="577" mass="62330" checksum="05B9CAD3DAC8BEAA" modified="2018-04-25" version="1" fragment="single">LLPVALPAAQQHPRLAEADRRGPVARGLRDQPGLKAAVAEGINLRKIGATRIGISVDERTRREHTQAVWRAFGGDMIDRDLDHEYRLPENLIRTSGYLSHPIFHMNRAEAEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATSEMMAVSWPEFADIHPHAPEDQTLGYAEVLADLSAKLCEITGYDAISMQPNSGAQGEYAGLLTIRAYHASRGEAQRDVCLIPTSAHGTNPASAQMAGMKVVAVATAANGDVDVADFRAKAEKHSDRLAACMITYPSTHGVFETTVREICEITHAHGGQVYLDGANMNALVGLARPGDFGSDVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLTPFLPGKPGGAGRVSAADFGSPSLLPISWAYCLMMGGAGLTQATKIAILNANYVAARLGKAYPILYSRNGRVAHECIVDCRPMKDRAGVGVEDVAKRLIDCGFHAPTMSWPVAGTLMIEPTESEPKAELDRFCTAMLAIAAEAEDVAEGRLPRDDNPLVRSPHTVEDLIGDWDRPYSREQACYPPGAFRVDKYWAPVNRVDNAFGDRNLICSCPPMELATAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN8</accession>
    <name>A0A2M9PGN8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">EamA family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000030">
        <property type="protein sequence ID" value="PJN96715.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="34"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="59"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="88"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="143"/>
            <end position="160"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96715.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="16877" checksum="4D9E6880C5BC613C" modified="2018-04-25" version="1" fragment="single">MDNSVFLIVLVAAALHAGWNAMVKVGLDRRSTMLLIALSQGAIALPLVAFAPWPEGAVWGWLAASMVFHVGYNVFLAEAYAHGDLSQVYPLARGSAPLIVMAVSTAYGARFTGGELLAVAAISLGIFAMTLKGSSAGRMRGRAVFWALGTAGFTAGYTLVDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ1</accession>
    <name>A0A2M9PGQ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Nicotinamidase/pyrazinamidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000030">
        <property type="protein sequence ID" value="PJN96716.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.850">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000868">
        <property type="entry name" value="Isochorismatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036380">
        <property type="entry name" value="Isochorismatase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00857">
        <property type="entry name" value="Isochorismatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52499">
        <property type="entry name" value="SSF52499"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Isochorismatase" evidence="1">
        <location>
            <begin position="11"/>
            <end position="208"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96716.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="22500" checksum="846C0D3D08DF1C07" modified="2018-04-25" version="1">MTLSPDPSAAALIVVDVQNDFCPGGALAVAGGHEVVPLVNRVSARFGARILTQDWHPEDHRSFASSHDDRAVFTQVEMPYGPQVLWPDHCVQGSRGAEFHADLVVDTADLILRKGFRSHVDSYSAFFENDRTTPTGLAGYLRERGFSQLFLAGLATDFCVAYSALDAARLGFGVTVLEDACRGIDIEGSLAAAMIEMAGAGVAFARAAEIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR0</accession>
    <name>A0A2M9PGR0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">DnaA_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00890</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000029">
        <property type="protein sequence ID" value="PJN96723.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024633">
        <property type="entry name" value="DnaA_N_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038454">
        <property type="entry name" value="DnaA_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11638">
        <property type="entry name" value="DnaA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DnaA_N" evidence="3">
        <location>
            <begin position="159"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="129"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00024640"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF11638"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96723.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="235" mass="25963" checksum="F53322E0CCAB432A" modified="2018-04-25" version="1">MQAAKVVGPDAASQKYDLLAALGSHALAADPGTQRLTLRFITLVTARYNWRRGALSVGQREIARLWSVDERTVKREMAKLRELGWIVLTSPGRRGRVARYALDLPEIRNVTREAWTRIGSDFEARMDGGATQGGTVVPFPQPDRTSDPAEERSVPDDGWEAVRRRLQAEDAAIFASWFAPLRSGGRAGGRLILIAPTAFDAAYIRSHYFDRLLVAVRRCTTASEVRLLSPTSGDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV0</accession>
    <name>A0A2M9PGV0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000019">
        <property type="protein sequence ID" value="PJN96763.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96763.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6987" checksum="92F8F4F5FB6D795D" modified="2018-04-25" version="1">MKGDSPEGRIASLALSIAAALALWLPCLLLWLGLKHGGAPLFDALLWSCERFLAPLQASFPLRAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ1</accession>
    <name>A0A2M9PGZ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_00370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000010">
        <property type="protein sequence ID" value="PJN96815.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.600">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1610">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010621">
        <property type="entry name" value="DUF1214"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037049">
        <property type="entry name" value="DUF1214_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010679">
        <property type="entry name" value="DUF1254"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037050">
        <property type="entry name" value="DUF1254_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06742">
        <property type="entry name" value="DUF1214"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06863">
        <property type="entry name" value="DUF1254"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014987238" evidence="1">
        <location>
            <begin position="24"/>
            <end position="510"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1254" evidence="3">
        <location>
            <begin position="87"/>
            <end position="221"/>
        </location>
    </feature>
    <feature type="domain" description="DUF1214" evidence="2">
        <location>
            <begin position="386"/>
            <end position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06742"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF06863"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96815.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="510" mass="55273" checksum="E782B2051B093E10" modified="2018-04-25" version="1">MAQVRLMITAAFALATVSQSAIAQESRFQALADLPFVENRPTPETAETLRQELAFQQVTQAYLWAMPLINTLGMKFGSEAAFGAGYNVLPIWKERLDPKTLVTTPNSDVIYAMSYVDMTETGPFVFEAPPNLQGILLDFWQRPIPVDGGAFYGDVGLPGPDAGEGGKFLVLPPGYDGDVPEGYYVYRSGTNNVFVFLRAFYQDPDDLTPAVDLIEQSKIYPLDLPEGERQAMVFPDASGVPANMLPRSTAEAFDQLKWLVDKEGEALAGPDGLGILANVGLVAGRPFDPDAETRAILDAAATTGYKTSRVIGLSNGVGDTSYLVWPDRQWVNPVNNAAFPGPDKPLGLDFRDREAGFTAIEPRIWFFTDYYSISPGMVSQVAGKGAAYQIAFNDAEGSALSGDDSYKLTLPADVPAALFWSLTLYEAENASGLATEARRFPSLGSRDNPVVNEDGATDVYVGPTAPEGHEANWLPTAPGRGFFAILRLYGPEQPAIDLSWKPGDLEPIRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH43</accession>
    <name>A0A2M9PH43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96853.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96853.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11521" checksum="4CC92EB366CD6272" modified="2018-04-25" version="1">MKFKDKTRGGHPFTLYTTEGGGDRPVHGRIVIESGEVMARDWFADGHYATHGKPHPFDLIPLREPSAAAVEAARSSLAPWCFSFEMTKKALRAAYEIDFPEGGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P468</accession>
    <name>A0A2M9P468_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30590</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004856">
        <property type="protein sequence ID" value="PJN92337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="6361" checksum="3D73481419E653BD" modified="2018-04-25" version="1" fragment="single">ISGTAPASRQSIAAGAWKALGGGDHHALGAEGGFSISGTAPASRQSIAAGAWKALGGGDHHALGAEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P484</accession>
    <name>A0A2M9P484_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-polyprenylphenol 6-hydroxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30550</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004834">
        <property type="protein sequence ID" value="PJN92340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7840" checksum="02C1266703EA3C34" modified="2018-04-25" version="1" fragment="single">PYTGRVYAEILMGFLRQDYHRVAEVHFEAGYVPRDRDLHAFAQALRSVGEPIFGQDASHISMAKLLAHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G6</accession>
    <name>A0A2M9P4G6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004541">
        <property type="protein sequence ID" value="PJN92434.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92434.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7935" checksum="010A226CC11F8977" modified="2018-04-25" version="1" fragment="single">EKMAAISTIGQFLPEFEAAPDASAWDRIAQMSAAAMAKASREEKMAAISTIGQFLPEFEAAPDASAWDRIAQMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4V8</accession>
    <name>A0A2M9P4V8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004044">
        <property type="protein sequence ID" value="PJN92591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8227" checksum="D37EA681348A80A6" modified="2018-04-25" version="1" fragment="single">MRGGWTETLVGLGPSHSISVRRWARGEVESAAQQREPRRDRVERAEDAGRIGLVLARRLDGDLGRLGPVPLDLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X1</accession>
    <name>A0A2M9P4X1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004124">
        <property type="protein sequence ID" value="PJN92563.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025948">
        <property type="entry name" value="HTH-like_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13276">
        <property type="entry name" value="HTH_21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_21" evidence="1">
        <location>
            <begin position="4"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92563.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="10044" checksum="581C77FCC4E1435B" modified="2018-04-25" version="1" fragment="single">ATEYGRYGYRRIAAMLQAAGWAVNVKRVERIWRLEGLKVPGKQPKKGRLWLNDGSCVRLRPERPNHVWSYDFVEDRTNDGRKLRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P564</accession>
    <name>A0A2M9P564_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">IMPDH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_27810</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003854">
        <property type="protein sequence ID" value="PJN92653.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001093">
        <property type="entry name" value="IMP_DH_GMPRt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00478">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="16"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="domain" description="IMPDH" evidence="3">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="31"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="54"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92653.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10666" checksum="24927F7666113E3F" modified="2018-04-25" version="1" fragment="single">GTPVIADGGIKFSGDFAKAIAAGASVAMVGSMLHHPHRRRRRRAPDDRDQRLRRRRRGNRHAGHSRRRHQVLRRLRQGDRGRRERRHGRLDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5D7</accession>
    <name>A0A2M9P5D7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_27125</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003641">
        <property type="protein sequence ID" value="PJN92733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="7"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="45"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN92733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10411" checksum="752BA02A671F2A68" modified="2018-04-25" version="1" fragment="single">NRLFLRAAVAMGPAGILAILAGWFTTEIGRQPWVVYNVMRTADAVSGHSALTMSVTLGAFVVMYFAVFGVGVSYMLKLVARGPDVEGDEPAAEDYTPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L2</accession>
    <name>A0A2M9P5L2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26185</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003351">
        <property type="protein sequence ID" value="PJN92827.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.40.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007899">
        <property type="entry name" value="CHAD_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038186">
        <property type="entry name" value="CHAD_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05235">
        <property type="entry name" value="CHAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CHAD" evidence="1">
        <location>
            <begin position="5"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92827.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4580" checksum="C438A73B8DD45B4A" modified="2018-04-25" version="1" fragment="single">MVAGNESSEGPHQLRIGLRRLRTAFAVFGESLGKDGLAPLSAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5X2</accession>
    <name>A0A2M9P5X2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">UDP-glucuronate decarboxylase</fullName>
            <ecNumber evidence="4">4.1.1.35</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_25270</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nucleotide-sugar biosynthesis; UDP-alpha-D-xylose biosynthesis; UDP-alpha-D-xylose from UDP-alpha-D-glucuronate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the NAD(P)-dependent epimerase/dehydratase family. UDP-glucuronic acid decarboxylase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.35" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01003076">
        <property type="protein sequence ID" value="PJN92932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00796">
        <property type="reaction ID" value="UER00771"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070403">
        <property type="term" value="F:NAD+ binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048040">
        <property type="term" value="F:UDP-glucuronate decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042732">
        <property type="term" value="P:D-xylose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033320">
        <property type="term" value="P:UDP-D-xylose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016040">
        <property type="entry name" value="NAD(P)-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044516">
        <property type="entry name" value="UXS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43078">
        <property type="entry name" value="PTHR43078"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16363">
        <property type="entry name" value="GDP_Man_Dehyd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NAD(P)-bd_dom" evidence="8">
        <location>
            <begin position="2"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="96"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005100"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012290"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF16363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN92932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13597" checksum="18390E0FD9BACA89" modified="2018-04-25" version="1" fragment="single">RAKIFQASTSEVYGDPSQHPQTEEYWGNVNPVGPRSCYDEGKRCAETLFFDYRRQHDLRVKVARIFNTYGPRMHPNDGRVVSNFIARAKIFQASTSEVYGDPSQHPQTEEYWGNVNPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5X6</accession>
    <name>A0A2M9P5X6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25220</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003057">
        <property type="protein sequence ID" value="PJN92937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="44"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9477" checksum="DF8CF369A9250514" modified="2018-04-25" version="1">MRVRLLPHDFPPWQTVYYYLRRWEREGVWAGVLHTLVMADREQAGREASPSAAILDSQSVRTADQKGAPKAMTPESASTAASGTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P614</accession>
    <name>A0A2M9P614_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Undecaprenyl-diphosphatase</fullName>
            <ecNumber evidence="4">3.6.1.27</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="14">Bacitracin resistance protein</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="13">Undecaprenyl pyrophosphate phosphatase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">CNY89_24995</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:28094"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58405"/>
            <dbReference type="ChEBI" id="CHEBI:60392"/>
            <dbReference type="EC" id="3.6.1.27"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the UppP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.27" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01002991">
        <property type="protein sequence ID" value="PJN92960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050380">
        <property type="term" value="F:undecaprenyl-diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016311">
        <property type="term" value="P:dephosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046677">
        <property type="term" value="P:response to antibiotic"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003824">
        <property type="entry name" value="UppP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30622">
        <property type="entry name" value="PTHR30622"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02673">
        <property type="entry name" value="BacA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0046">Antibiotic resistance</keyword>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="11 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="10 15" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="23"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="53"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="16">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010621"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012374"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00021581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00032707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00032932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN92960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8377" checksum="EFA29BCE77D5E835" modified="2018-04-25" version="1" fragment="single">PTMAGAFAYDLYKNRDVLSFDDATIIAIGFAAAFVSALFVVRRLLDFVSRRGYSLFGWWRIIVGSVALIALLATGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P696</accession>
    <name>A0A2M9P696_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Conjugal transfer protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002745">
        <property type="protein sequence ID" value="PJN93053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="5106" checksum="18133DFA512D30F2" modified="2018-04-25" version="1" fragment="single">DALDAIGGDLESSSRSALDAYLRIAPTIDIAQGDRLAIFVNRDLLFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F1</accession>
    <name>A0A2M9P6F1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002635">
        <property type="protein sequence ID" value="PJN93095.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93095.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7052" checksum="8EE66D5D7AF1D172" modified="2018-04-25" version="1" fragment="single">SVTFYVGQRLIVLAYPGGEDELMHYEVSDSASAELISTPDEILIVQKGEAGQLTGYDVPLTVIHD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M8</accession>
    <name>A0A2M9P6M8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002390">
        <property type="protein sequence ID" value="PJN93187.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00530"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93187.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8915" checksum="65393D727F8A2F8D" modified="2018-04-25" version="1" fragment="single">MTKRPKATINPALLVWARKSAGYEPDVAAGKLGVDEERLLAWEAGDEPPSIPQLRNMAELYKRPLAVLYLPKPPTTFQPM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N2</accession>
    <name>A0A2M9P6N2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23045</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002434">
        <property type="protein sequence ID" value="PJN93169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="5573" checksum="422783C67328574D" modified="2018-04-25" version="1" fragment="single">MPWTEAARREYRRARPRYASDMTDREWALVAPFMPPPRRLGRPRTT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W9</accession>
    <name>A0A2M9P6W9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-hydroxybutyrate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21825</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002131">
        <property type="protein sequence ID" value="PJN93306.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93306.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14415" checksum="A8C32A39AF7EC725" modified="2018-04-25" version="1" fragment="single">MRAAGWGRIVVIASAHGLTASPFKSAYVAAKHGQVGFVKVCALETAREAITCNAICPGYVLTPLVEAQIPATMEQYKMDRETVIREVLLERQPSKTFATTEQIGQTVAFLCSPAAEQITGTTISVDGGSLDFKPL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P728</accession>
    <name>A0A2M9P728_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Protein meaA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_21595</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>adenosylcob(III)alamin</name>
            <dbReference type="ChEBI" id="CHEBI:18408"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002073">
        <property type="protein sequence ID" value="PJN93337.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031419">
        <property type="term" value="F:cobalamin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006159">
        <property type="entry name" value="Acid_CoA_mut_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006158">
        <property type="entry name" value="Cobalamin-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036724">
        <property type="entry name" value="Cobalamin-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02310">
        <property type="entry name" value="B12-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52242">
        <property type="entry name" value="SSF52242"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00640">
        <property type="entry name" value="acid_CoA_mut_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51332">
        <property type="entry name" value="B12_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="B12-binding" evidence="3">
        <location>
            <begin position="12"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001922"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93337.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15595" checksum="064D3E22C141FF7B" modified="2018-04-25" version="1" fragment="single">RVEAVSDQLGRRLKFLVGKPGLDGHSNGAEQIAVRARDCGMEVVYEGIRLTPAQIVNAALEESVHVVGLSILSGSHLPLVRDVMDRLRAAGLDDLPVVVGGIIPDADAEQLKGYGVARVYTPKDFDLNRIMLDIVDLAEAEGRAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B1</accession>
    <name>A0A2M9P7B1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001892">
        <property type="protein sequence ID" value="PJN93441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6127" checksum="29302A3D750CD4E2" modified="2018-04-25" version="1">MRVKAIWGLLPAAIGDLAFQAANSLVDGVEAMLNGVVSRINGFIGGINQGLEALGVDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7B6</accession>
    <name>A0A2M9P7B6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21050</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001959">
        <property type="protein sequence ID" value="PJN93405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7896" checksum="4CC0B249620AAB58" modified="2018-04-25" version="1" fragment="single">MISADDVVESADPLFSQVWIVYQNHQRAKISKARHHLNELRWPLYYQPHLGSVRCSKMTAALNRMSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G9</accession>
    <name>A0A2M9P7G9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MarR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001881">
        <property type="protein sequence ID" value="PJN93450.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000835">
        <property type="entry name" value="HTH_MarR-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13463">
        <property type="entry name" value="HTH_27"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00347">
        <property type="entry name" value="HTH_MARR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50995">
        <property type="entry name" value="HTH_MARR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH marR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50995"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93450.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="16583" checksum="02CB625141FA67C9" modified="2018-04-25" version="1">MVERLHRLLLDVVKDEFERLGIIDINSVQALLLFNVGDNEVTAGELKTRGYYQGSNVSYNLKKLVECGYMHHQRCAVDRRAVRVRLTDRGRHIRGVIADLFQRHAEGIVNREVLGDLRLDDINTSLRRMEHYWTDQIRYIY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I4</accession>
    <name>A0A2M9P7I4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Virulence protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001795">
        <property type="protein sequence ID" value="PJN93511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009744">
        <property type="entry name" value="VirC1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07015">
        <property type="entry name" value="VirC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="14820" checksum="BE09EC3A36F1B03B" modified="2018-04-25" version="1" fragment="single">MKIISFINFKGGAGKTTALSVVASALLARGRKVALFECDENAPLGSWRANARARGTWDEACEIFPAGDLGLFERSAVAAETAGYEFALVDTQGGGSELNSMVVVSSSLAVIPTAITSYDIDASVLTVEFIVDLLEREQLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7J2</accession>
    <name>A0A2M9P7J2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001836">
        <property type="protein sequence ID" value="PJN93485.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012667">
        <property type="entry name" value="CbtB_put"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003346">
        <property type="entry name" value="Transposase_20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09489">
        <property type="entry name" value="CbtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02371">
        <property type="entry name" value="Transposase_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93485.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="19066" checksum="45D0428DC4EC96BB" modified="2018-04-25" version="1">MSYFGLNPRVRQSGLGAAHHGRISKVGRSHARAMLVEAAWAAAKAPGPLHAFFVRIRAKRGHQVAAVALARKLTVLCWHLLTREEDYLWARPALVAKKTRDMELRAGLPQKKGNRRGPAYAYNVKELRAQESELARHAEKTYEQFVARWKRAHNAGHDYRHSMAFPCH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7L3</accession>
    <name>A0A2M9P7L3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001778">
        <property type="protein sequence ID" value="PJN93523.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93523.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="12702" checksum="E40B3D6E97FC47B3" modified="2018-04-25" version="1">MESIDAITALSALAQSTRLETFRLLVRHEPEGVPAGELARLLDVPQNTMSAHLATMSRAGLIEGVRHSRSIIYRANLDRFRALTLFLLKDCCGGNAALCAPLIAEITPCCAPEEARQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N5</accession>
    <name>A0A2M9P7N5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19975</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001735">
        <property type="protein sequence ID" value="PJN93552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="29"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7583" checksum="CA9119B1C3FBB8BD" modified="2018-04-25" version="1" fragment="single">MPGLLAVSSARTQAIPEARGLANAIFLPSAIPPVPAGPRRGVRKTRQATDGPARSPRGRGSARLRPRANHVPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T2</accession>
    <name>A0A2M9P7T2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19580</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001649">
        <property type="protein sequence ID" value="PJN93611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13296" checksum="4644D41C727C75E4" modified="2018-04-25" version="1" fragment="single">DPDTLLELRALEIEAAAAERADALRAQEIAMADVQHARENANANDDGIRRWLAIILPLVAVLFGGAFIGALIWKNQITEAVGIAGMVLGWLIRDASSSTGFYFGTSLGSKKKSEELASAAERRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P837</accession>
    <name>A0A2M9P837_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Chemotaxis protein MotB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18955</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001534">
        <property type="protein sequence ID" value="PJN93707.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025713">
        <property type="entry name" value="MotB_N_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13677">
        <property type="entry name" value="MotB_plug"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="domain" description="MotB_plug" evidence="2">
        <location>
            <begin position="18"/>
            <end position="65"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93707.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15688" checksum="C82180AC28CEBE63" modified="2018-04-25" version="1" fragment="single">MDRRNSKATIIVKRPKVVAGGHHGGAWKVAYADFVTAMMAFFLLMWLLSTTDEETKLGLADYFSPTIPIHSTNGGGDGPFGGASMFSQDVLAQDATGRLGGPDEAADESLWDLENRLRGASGDAVAADPLLRHIRTRLTDEGLIIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N6</accession>
    <name>A0A2M9P8N6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17700</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001361">
        <property type="protein sequence ID" value="PJN93902.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93902.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11266" checksum="526686CC5ED0C3EF" modified="2018-04-25" version="1" fragment="single">TGRTLHFTREGLPFGSEQFLPGRRTLWRFEADQCQAGRWWPEGGGVCFSYDRDPTPICWDFRAEGGGHVAELLEGGLATGFTLRLDRIETAPLPCPGPEVGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q4</accession>
    <name>A0A2M9P8Q4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Putative 2-aminoethylphosphonate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001359">
        <property type="protein sequence ID" value="PJN93904.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93904.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="11156" checksum="3640DC2089C36D64" modified="2018-04-25" version="1" fragment="single">QRQRVALARALAIEPRMLLLDEPFGALDARVRKELRTGLRDIHDQTGLTTVFVTHDQEEAMELSDLVVVMSMGRIEQVGTPQDIRARPATKFVRDFVAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U5</accession>
    <name>A0A2M9P8U5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IMP dehydrogenase</fullName>
            <ecNumber evidence="3">1.1.1.205</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17305</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the IMPDH/GMPR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.205" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001305">
        <property type="protein sequence ID" value="PJN93960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003938">
        <property type="term" value="F:IMP dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005990">
        <property type="entry name" value="IMP_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001093">
        <property type="entry name" value="IMP_DH_GMPRt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11911">
        <property type="entry name" value="PTHR11911"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00478">
        <property type="entry name" value="IMPDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IMPDH" evidence="2">
        <location>
            <begin position="2"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005502"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16239" checksum="EBB73B86064755FA" modified="2018-04-25" version="1" fragment="single">GTPVIADGGIKFSGDFAKAIAAGASVAMVGSMLAGTDEAPGEVILYQGRSFKSYRGMGSLGAMARGSADRYFQKEASQDKLVPEGIEGQVPYKGGVGAVLHQLVGGLRAAMGYTGMATIPAMRQGCEFVRITGAGLRESHVHDVQITRESPNYRIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V9</accession>
    <name>A0A2M9P8V9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">FtsK domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17270</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001301">
        <property type="protein sequence ID" value="PJN93968.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002543">
        <property type="entry name" value="FtsK_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018541">
        <property type="entry name" value="Ftsk_gamma"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09397">
        <property type="entry name" value="FtsK_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01580">
        <property type="entry name" value="FtsK_SpoIIIE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00843">
        <property type="entry name" value="Ftsk_gamma"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50901">
        <property type="entry name" value="FTSK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FtsK" evidence="3">
        <location>
            <begin position="1"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00289"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50901"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93968.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="238" mass="25766" checksum="78A60BA186F8A710" modified="2018-04-25" version="1" fragment="single">DEDTGEPVFETDSFQPQTMPFIVVVVDEMADLMMVAGKEIEACIQRLAQMARASGIHLIMATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEMGAEQLLGQGDMLYMAGGGRITRVHGPFVSDEEVEEVVRHMKSFGAPEYEAGVLEGPDADEEGDIDAVLGLGGNSTSDDALYDQAVAIVAKDRKCSTSYIQRKLSVGYNKAAKLVELMEEAGVVSQANHVGKREVLVPER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W4</accession>
    <name>A0A2M9P8W4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Resolvase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001292">
        <property type="protein sequence ID" value="PJN93980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="1">
        <location>
            <begin position="2"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16175" checksum="609092C1EFA44BC2" modified="2018-04-25" version="1" fragment="single">MRIIGYERVSTARQGASGLGLAAQRQAIDGFAVARNSTLLARFTEVESGRNPDRPELAKALHLARVTRATLVIAKLDRLSRNAAFLLTLRDSGVRFAAVDLPEANDLTVGIMALVVQAEGEAISKRTKEALAVARGRGVRLGNPTMARRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z5</accession>
    <name>A0A2M9P8Z5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001286">
        <property type="protein sequence ID" value="PJN93989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036282">
        <property type="entry name" value="Glutathione-S-Trfase_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47616">
        <property type="entry name" value="SSF47616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17616" checksum="485D6892AD11495D" modified="2018-04-25" version="1" fragment="single">QRPAVEPPLANQAFRANALWRDKLVFSTIQTFGTAATTISQMKWTGVALDANAHLARSAERLAHILGWLDGQLADPESGFQPGFLSIHDIFLAAHVRFVQARPLGIDLILPKYEKVASLLERLDERDSFKTNPIWWWEPGIIGYTPDGAPVFKGGDQPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P905</accession>
    <name>A0A2M9P905_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17000</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001266">
        <property type="protein sequence ID" value="PJN94015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="30516" checksum="64717F0180358CA7" modified="2018-04-25" version="1" fragment="single">MANPFLRRATEYVRDDASFLAIVSPAPLTTFLAKSRHKDEMFELPVRIIGEPGSGKTMLAKLAEFRMVDAIARDLSSSTNRDLAGALGEAGFLIGGVPHVVAVREPMESDYRDFWELPYDGAVKTKLAFWFAQARSILGLIRNLTANRRRGLSDIRFVARDSSEAQVEQIGGLDPTGIRERALEVQKAIYSVVAGLRPPAIEHLPTAATSPYNPFEAISQVEIEWKGEIIALSPLVMFDDVHALHPEQRDGLFAALARREIRFGRWLMMRLDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P996</accession>
    <name>A0A2M9P996_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16450</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001192">
        <property type="protein sequence ID" value="PJN94114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11526" checksum="5B32F9DA9094C056" modified="2018-04-25" version="1" fragment="single">CRYARAILRDAPILLLDEPTSALDSESESLIRAGLDRLARGRTTLVIAHRLTTILDSDMIVVMDRGRVVEQGTHAELLALEGLYADLYRLQFAGTEDEEAEEVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P999</accession>
    <name>A0A2M9P999_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001212">
        <property type="protein sequence ID" value="PJN94089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7775" checksum="753E9F9469596372" modified="2018-04-25" version="1">MAIDDDDFEDDDEIELFEDYEDGEIGTIRFLQAHGVERTCARCGAPFRGMPDHGHCYACADAIEAGHPVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9A0</accession>
    <name>A0A2M9P9A0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">50S ribosomal protein L10</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">rplJ</name>
        <name evidence="4" type="ORF">CNY89_16525</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the universal ribosomal protein uL10 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001205">
        <property type="protein sequence ID" value="PJN94100.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05797">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1730">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043141">
        <property type="entry name" value="Ribosomal_L10-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001790">
        <property type="entry name" value="Ribosomal_L10P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11560">
        <property type="entry name" value="PTHR11560"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00466">
        <property type="entry name" value="Ribosomal_L10"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF160369">
        <property type="entry name" value="SSF160369"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002633"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00021186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94100.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="12270" checksum="9C0812A40C081FFD" modified="2018-04-25" version="1" fragment="single">VRVAKNKLAKIALKGTPAERMGDLLKGMTVLAYSQDPVAAAKAVEAFTKDNKKIVVLGGAMGATPLDEAGVKAVASMPSREELIASVVACIGAPGSQLASAIGAPAADIAGILTTLEEREAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E8</accession>
    <name>A0A2M9P9E8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Signal recognition particle protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_16280</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001175">
        <property type="protein sequence ID" value="PJN94139.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048500">
        <property type="term" value="C:signal recognition particle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005525">
        <property type="term" value="F:GTP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003924">
        <property type="term" value="F:GTPase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006614">
        <property type="term" value="P:SRP-dependent cotranslational protein targeting to membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013822">
        <property type="entry name" value="Signal_recog_particl_SRP54_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004780">
        <property type="entry name" value="SRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036225">
        <property type="entry name" value="SRP/SRP_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022941">
        <property type="entry name" value="SRP54"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000897">
        <property type="entry name" value="SRP54_GTPase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042101">
        <property type="entry name" value="SRP54_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564">
        <property type="entry name" value="PTHR11564"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11564:SF7">
        <property type="entry name" value="PTHR11564:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00448">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02881">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00962">
        <property type="entry name" value="SRP54"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00963">
        <property type="entry name" value="SRP54_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47364">
        <property type="entry name" value="SSF47364"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0342">GTP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SRP54_N" evidence="5">
        <location>
            <begin position="1"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="SRP54" evidence="4">
        <location>
            <begin position="101"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="164"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00963"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94139.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="17483" checksum="B0FC818C78A40E73" modified="2018-04-25" version="1" fragment="single">MFENLSDRLSGVFGKLTKAGALSDEDVSIALREVRVALLEADVSLAVARDFVKAVGDKARGQAVTKSVTPGQQVVKIVHDELIRVLAGEGKIPELRIDNPPAPILMVGLQGSGKTTTTAKLAKRLHEREGKRVLMASLDTRRPAAMEQLAVLGSQIGVDVLPIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J1</accession>
    <name>A0A2M9P9J1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1330 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001146">
        <property type="protein sequence ID" value="PJN94179.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010753">
        <property type="entry name" value="DUF1330"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07045">
        <property type="entry name" value="DUF1330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1330" evidence="1">
        <location>
            <begin position="2"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94179.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10279" checksum="2CEE3294C6EB6BAA" modified="2018-04-25" version="1">MPAYWIARIDVSDTEAYSRYAALAGPAIKAYGGEFLARGGEARQMEGKGRARNVVVRFPDLDAAEACYRSPAYQEALTHAKGASERELVLVEGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W6</accession>
    <name>A0A2M9P9W6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MucR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001049">
        <property type="protein sequence ID" value="PJN94322.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94322.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14168" checksum="3BAC3A5119A74C14" modified="2018-04-25" version="1">MLALTTEIVSAHLANNSVTQTDVAGFIQSVYAKLSELAQGEETASVELTPAVPIKKSVTDDFIVCLEDGKKLKMLKRHLMTSYGMTPEEYRAKWGLKPDYPMVAPNYAAKRQELAKKIGLGRKPRVTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z4</accession>
    <name>A0A2M9P9Z4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Colanic acid biosynthesis glycosyltransferase WcaL</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001030">
        <property type="protein sequence ID" value="PJN94355.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94355.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="30361" checksum="7DEAA194D3E517DD" modified="2018-04-25" version="1" fragment="single">MDGSAMPTEMSGVARPGAGLKVAFIVTEFPKTTETFIMRDVMDFHRMGCEVRIFHLTRFNRKDAVHDFARPTLDWARDYPYFASREVIGATGHYLRRKGRAVRGVLRDILRGCRRDPAMLLKSLFILPKSLRIAREISDWGGDHVHAAYAGHPATAAWIVKRVTGVPFSLSSHAHDLFETQALLAEKLPEAAFVRTISLYNRDFILKHVPALAARPPVVIHVGNYLTSPPPREAAPGGPFRLLYVGSLESRKGVDLLLRALAGTSIPDWRLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA61</accession>
    <name>A0A2M9PA61_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Probable queuosine precursor transporter</fullName>
            <shortName evidence="1">Q precursor transporter</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Involved in the import of queuosine (Q) precursors, required for Q precursor salvage.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000980">
        <property type="protein sequence ID" value="PJN94435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:1990397">
        <property type="term" value="P:queuosine salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02088">
        <property type="entry name" value="Q_prec_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003744">
        <property type="entry name" value="YhhQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34300">
        <property type="entry name" value="PTHR34300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02592">
        <property type="entry name" value="Vut_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00697">
        <property type="entry name" value="TIGR00697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="60"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="90"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="130"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="172"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02088"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="215" mass="22725" checksum="471F582851AD7E14" modified="2018-04-25" version="1">MNRALLPGVIAMAAIVTASNVLVQFLAGPWLTWGAFTYPFAFLVTEIVNRLQGPQAARKVVLAGFVVGLVCSAIGSQIEGAFGPLVSARVAMASATAFLAAQFLDIAVFDRLRHGTWWRAPLAADLAASVLDTALFFTIAFSAGLVFLAPSVDVAWANEALPIFGIGPVAPLWVSLALADLGVKLGMAAFALFPFRIITRRAARRRVAPETLQAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC9</accession>
    <name>A0A2M9PAC9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Molybdopterin synthase catalytic subunit</fullName>
            <ecNumber evidence="4">2.8.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">MPT synthase subunit 2</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="8">Molybdenum cofactor biosynthesis protein E</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Molybdopterin-converting factor large subunit</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="11">Molybdopterin-converting factor subunit 2</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_14275</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Converts molybdopterin precursor Z into molybdopterin. This requires the incorporation of two sulfur atoms into precursor Z to generate a dithiolene group. The sulfur is provided by MoaD.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2 [molybdopterin-synthase sulfur-carrier protein]-C-terminal Gly-NH-CH2-C(O)SH + cyclic pyranopterin phosphate + H2O = 2 [molybdopterin-synthase sulfur-carrier protein]-C-terminal Gly-Gly + 4 H(+) + molybdopterin</text>
            <dbReference type="Rhea" id="RHEA:26333"/>
            <dbReference type="Rhea" id="RHEA-COMP:12160"/>
            <dbReference type="Rhea" id="RHEA-COMP:12202"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:58698"/>
            <dbReference type="ChEBI" id="CHEBI:59648"/>
            <dbReference type="ChEBI" id="CHEBI:90619"/>
            <dbReference type="ChEBI" id="CHEBI:90778"/>
            <dbReference type="EC" id="2.8.1.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterotetramer of 2 MoaD subunits and 2 MoaE subunits. Also stable as homodimer. The enzyme changes between these two forms during catalysis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MoaE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.12" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000951">
        <property type="protein sequence ID" value="PJN94479.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030366">
        <property type="term" value="F:molybdopterin synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00756">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036563">
        <property type="entry name" value="MoaE_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003448">
        <property type="entry name" value="Mopterin_biosynth_MoaE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02391">
        <property type="entry name" value="MoaE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54690">
        <property type="entry name" value="SSF54690"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="12">
        <location>
            <begin position="125"/>
            <end position="148"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005426"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013858"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00025448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00026066"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00029745"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00030781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94479.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16061" checksum="57D10560E006EF98" modified="2018-04-25" version="1">MVVRVQAEDFDLGAELTALRAGRRDVGALVSFTGLVRDSADGLEGLTLEHYPGMTERALAAIEAEAQARWLLQATLVIHRYGRLAPGEQIMMVATASAHRGAAFEAAEFLMDYLKSRAPFWKKETGPAGSSWVGAKAEDEAALGRWSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD6</accession>
    <name>A0A2M9PAD6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Non-homologous end joining protein Ku</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">ku</name>
        <name evidence="4" type="ORF">CNY89_14160</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer. Interacts with LigD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the prokaryotic Ku family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000941">
        <property type="protein sequence ID" value="PJN94497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003690">
        <property type="term" value="F:double-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006303">
        <property type="term" value="P:double-strand break repair via nonhomologous end joining"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00789">
        <property type="entry name" value="KU_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.290.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01875">
        <property type="entry name" value="Prokaryotic_Ku"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006164">
        <property type="entry name" value="Ku70/Ku80_beta-barrel_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009187">
        <property type="entry name" value="Prok_Ku"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016194">
        <property type="entry name" value="SPOC-like_C_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41251">
        <property type="entry name" value="PTHR41251"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02735">
        <property type="entry name" value="Ku"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006493">
        <property type="entry name" value="Prok_Ku"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00559">
        <property type="entry name" value="Ku78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100939">
        <property type="entry name" value="SSF100939"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02772">
        <property type="entry name" value="Ku_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0234">DNA repair</keyword>
    <keyword evidence="1 2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ku" evidence="3">
        <location>
            <begin position="55"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="29467" checksum="20EDEF800A7AED26" modified="2018-04-25" version="1">MASSSFWKGYLKLSLVTCPVSMAPATSETEKVRFHTLNARTGARIVSQYVDAVTGEPVAEEDEVKGYPRGEDEYLLLEDEEIEAVALESTRTIDIEMFVPSDTIGWIWYDKPHYLSPSDKVGEEAFCVIRDAMAATGTVGVSRLVLYRRERAVMLEPRDKGIVLWTLRYGDEVRDEADYFGEVGAGKVEAGLMKLVTRLVDERTKPWDPEMVADPVQERLLDIIAAKRKGRKRAKARPRAQASPDKVVNILDALRRSIASEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN8</accession>
    <name>A0A2M9PAN8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_13680</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000894">
        <property type="protein sequence ID" value="PJN94581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012318">
        <property type="entry name" value="HTH_CRP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018335">
        <property type="entry name" value="Tscrpt_reg_HTH_Crp-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13545">
        <property type="entry name" value="HTH_Crp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00034">
        <property type="entry name" value="HTHCRP"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00419">
        <property type="entry name" value="HTH_CRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00042">
        <property type="entry name" value="HTH_CRP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51063">
        <property type="entry name" value="HTH_CRP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="2">
        <location>
            <begin position="43"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="domain" description="HTH crp-type" evidence="3">
        <location>
            <begin position="155"/>
            <end position="233"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="27944" checksum="6F96F592DC6CF0FC" modified="2018-04-25" version="1">MAVARLHKQLDVGCADCAIRHRAICALCGPEHLEELNRIKSYRRFEPGETIAWAGERLALVGSVVEGVAMLSSTLADGRRQMVGLLLPSDFIGRPGRELNPYDVVAVTDITLCLFQRAEFERLMARMPQLERRLLEMTLDELDSAREWMLLLGRKTAREKIASLFVIMARRDAELNRTRTGDGLEFPLYITREAIADYLGLTIETVSRQISALRKDGVIELRENRSIHVPDLVRLIDESGDDADGGVLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAR7</accession>
    <name>A0A2M9PAR7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SGNH_hydro domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13345</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000860">
        <property type="protein sequence ID" value="PJN94634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016788">
        <property type="term" value="F:hydrolase activity, acting on ester bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013830">
        <property type="entry name" value="SGNH_hydro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036514">
        <property type="entry name" value="SGNH_hydro_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13472">
        <property type="entry name" value="Lipase_GDSL_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SGNH_hydro" evidence="2">
        <location>
            <begin position="56"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="401" mass="43418" checksum="B550C4B28A54C075" modified="2018-04-25" version="1" fragment="single">KAAARKPATGKSGAGKTGKRKAGAGRGETPPVPVIDTRPRRLREQPEGAPWNILFLGGSNTVMRNGYVDALVASLEDRLGPVSRITNLAAGGNSTVHGLMLAMQQPDLADYDIVVIEYGVNDVKLAKSDGIDAWKGATEGLVRRLLAARPDVHVVFALFGRQDMQKRYMFRPAESTVELAAHYAPTQRVTLVDIDHLFRDVLFRDQAEFADLYVDRSHYRRPAIARLVGALIASGILGAPTRAAAPLPEPLYPWHFAGAKLVDLVGDPETARVFANSRYTVPARPIGLGETVTIELPGAIVGIEFVAIPTAATLLLQEEGEAPVALHTRHARTGEANYPFLLRCRALENRPWASGRRGPRKVVLEVVADAPEEQVKKGLNMVAAEPGTAEGIFLTRFLCIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB23</accession>
    <name>A0A2M9PB23_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12750</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000805">
        <property type="protein sequence ID" value="PJN94728.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94728.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9881" checksum="D32E177CD5BF03C5" modified="2018-04-25" version="1">MHDGRDEDELSRCLCRFVTGQDRMFSAVCWERRWTSPRWFALRIIVDGHFYRLRGERGHCRAAWRREMGEAGELPDRLRAAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB30</accession>
    <name>A0A2M9PB30_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Protein-methionine-sulfoxide reductase catalytic subunit MsrP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_12650</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000794">
        <property type="protein sequence ID" value="PJN94746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016667">
        <property type="term" value="F:oxidoreductase activity, acting on a sulfur group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01206">
        <property type="entry name" value="MsrP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022867">
        <property type="entry name" value="MsrP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000572">
        <property type="entry name" value="OxRdtase_Mopterin-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036374">
        <property type="entry name" value="OxRdtase_Mopterin-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00174">
        <property type="entry name" value="Oxidored_molyb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56524">
        <property type="entry name" value="SSF56524"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="1" id="KW-0500">Molybdenum</keyword>
    <keyword evidence="4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Oxidored_molyb" evidence="5">
        <location>
            <begin position="52"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00174"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="29958" checksum="A73A6E765B190135" modified="2018-04-25" version="1" fragment="single">AATLAAPALAATDRWSTTDPPTSLDAITSYNNFYEFGFDKGDPKANSGDLTTSPWSVKIGGLVGKPGDYALEDILGAAAIEDRTYRLRCVEAWSMVIPWQGFPLAALLEKVEPASSAKYVAFQTLLRPEEMPGQRSVFGGIDWPYVEGLRLDEAMHPLTILATGLYGEALPNQNGAPLRLVVPWKYGFKSIKSIVGITLTESPPPTTWNLLQPGEYGFYANVNPEVSHPRWSQASERVVGEGLFARRRDTRPFNGYAEEVAGMYAGMDLARFY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB49</accession>
    <name>A0A2M9PB49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Choloylglycine hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_12530</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C59 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000784">
        <property type="protein sequence ID" value="PJN94766.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029132">
        <property type="entry name" value="CBAH/NAAA_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02275">
        <property type="entry name" value="CBAH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014754290" evidence="3">
        <location>
            <begin position="27"/>
            <end position="354"/>
        </location>
    </feature>
    <feature type="domain" description="CBAH" evidence="4">
        <location>
            <begin position="29"/>
            <end position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94766.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="354" mass="37464" checksum="A20C60E6552B25AB" modified="2018-04-25" version="1">MFRFPRQAATAALAATALLATGPSPAAACTRAVYLGAEDVVITTRSMDWVTDLHSNLWVFPRGLARDGAAGPASVKWTSKYGSVVASAFEAASADGMNEKGLVANLLYLAESQYPEAAGDSDPAISISAWAQYVLDNYATVAEAVADLEANPLRVAAVETPDGHAGTVHLAISDPGGDSAIFEYLGGKLVVHHGREFQVMTNSPPFDQQLALDAYWEQIGGDVMLPGTNRAADRFVRASFYIDAVPVTGNVDEALASAFSVIRNASVPLGISTPGEPNIASTLWRSVSDQKNRRYFFESTRSPNVFWVDLDALDFAEGAPVRRLPLTGGEIYAGDAAAAFQSAEPFAFLQAPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB71</accession>
    <name>A0A2M9PB71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12445</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000776">
        <property type="protein sequence ID" value="PJN94779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014877023" evidence="1">
        <location>
            <begin position="26"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7676" checksum="283C7CFDFDA7F745" modified="2018-04-25" version="1" fragment="single">MTSRRIASALRGLLTAALLAGPIQAATAEGLSGAYLAATQADFRDDYAAAADYYRRALVFDPGNLAMLQNAAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB9</accession>
    <name>A0A2M9PBB9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12125</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ros/MucR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000743">
        <property type="protein sequence ID" value="PJN94833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1550">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041920">
        <property type="entry name" value="ROS/MUCR_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008807">
        <property type="entry name" value="ROS_MUCR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05443">
        <property type="entry name" value="ROS_MUCR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="133"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007031"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17667" checksum="46453E85973A95A4" modified="2018-04-25" version="1">MDTENLPDQTELLALTVEIVSAYTENNALEMAAVPDLIGSVFAKLSELAAGKQAVPEVLTPAVPIRRSVTEDHIVCLEEGKKVKLLKRHLMVNHGLTPDDYRAKWGLKPDYPMIAPSYATKRQEIAKEIGLGRKPPIVEPAPEPAIVPTTPPKKRGRSKSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG1</accession>
    <name>A0A2M9PBG1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Hydroxyacylglutathione hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000724">
        <property type="protein sequence ID" value="PJN94868.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lactamase_B" evidence="1">
        <location>
            <begin position="15"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94868.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7708" checksum="8E5716EE830A8119" modified="2018-04-25" version="1" fragment="single">MPVEIVTIPCLTDNYAYLVHDPATGETLLVDAPEAEPIEAALEARGWRLTTILITHHHADHIGAVEGAAPQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBK4</accession>
    <name>A0A2M9PBK4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">FAD-binding oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the oxygen-dependent FAD-linked oxidoreductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000698">
        <property type="protein sequence ID" value="PJN94915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012951">
        <property type="entry name" value="BBE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016164">
        <property type="entry name" value="FAD-linked_Oxase-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006094">
        <property type="entry name" value="Oxid_FAD_bind_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08031">
        <property type="entry name" value="BBE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01565">
        <property type="entry name" value="FAD_binding_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55103">
        <property type="entry name" value="SSF55103"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="3">
        <location>
            <begin position="76"/>
            <end position="246"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="537"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="537" mass="58148" checksum="1C8D171AF62005A9" modified="2018-04-25" version="1" fragment="single">RNVLRKGDEMPVSYSHKKHRDARLHASWDASPDSHFDGLGVPRAAAKATLAAMQGRLVLPGDDSYDQDRLLFNPLFNDYPVAIAFCATEADVAVVLAFARGLGLGFTVRSGGHCTAGFSSGSGVLIDVSALTSLVIDPLGLVATVGCGVKFGAFFQTLDAYGLHVPGGECPDVCVGGYVQGGGYGFTSVSFGMNCDNVLALRVMLADGAIVTASNAHNADLFWAMRGGTGGNFGVLLAVLYRLRPLASVWGWAVAWPLDSPAALSQAAQALMLLQADYMRASICGSDMTIQVSLCWQNWIDPTAPQPPPNAPLRPYLMARGLYLGDPAKGQALIRPLAALPGAILQWTQSARFVKMNDMLLNYPQGMPPIDVMPFEDKSSRYVSRDLTFAEWTQMLGYFAAAPANSAYGYLEFYGGAINSADPWLNAFSHRNCAFNLVMDVFWYENVDRKAREDFLLGWNKMVAAYWDGEIYQNYCNIVVPDYTANYWGQAYSLLQAIKAKYDPDAAFAFRQQVEPPPPGQVPTGPANLLAALAQPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL2</accession>
    <name>A0A2M9PBL2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EamA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11565</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000696">
        <property type="protein sequence ID" value="PJN94921.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="44"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="75"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="157"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="44"/>
            <end position="169"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94921.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="20642" checksum="706BA260714FAC4E" modified="2018-04-25" version="1">MFLGEPVRLFRITAVVVGLAGVMVVLSPRFQIEGVAEASKLETIGAMAAILGAVFAALAQVFLRRLVTAEPTAAIVFYFSVTASILSLATLPFGWAVPTPFEAATLIAAGVLGGIGQILLTESYRHADVSVIAPFEYVSMVLALILGYLVFEDVPTSTMLIGAALIVSAGLAIIFREHRLGLERARARRVITPQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL5</accession>
    <name>A0A2M9PBL5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">Glucose-inhibited division protein A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_11540</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homodimer. Heterotetramer of two MnmE and two MnmG subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the MnmG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000693">
        <property type="protein sequence ID" value="PJN94924.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002098">
        <property type="term" value="P:tRNA wobble uridine modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.570">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004416">
        <property type="entry name" value="MnmG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020595">
        <property type="entry name" value="MnmG-rel_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026904">
        <property type="entry name" value="MnmG_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044920">
        <property type="entry name" value="MnmG_C_subdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806:SF0">
        <property type="entry name" value="PTHR11806:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13932">
        <property type="entry name" value="GIDA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01280">
        <property type="entry name" value="GIDA_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01281">
        <property type="entry name" value="GIDA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0274">FAD</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="8" id="KW-0520">NAD</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="11">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="domain" description="GIDA_C" evidence="12">
        <location>
            <begin position="130"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020461"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00031800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF13932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN94924.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="347" mass="38198" checksum="44B516AF7952EF6C" modified="2018-04-25" version="1" fragment="single">GPRYCPSIEDKVTRFADRDNHQIFLEPEGLDSDLIYPNGISTSLPREVQTEYVRSIEGLEQAEIVRHGYAIEYDYVDPRALDATLQVKTAPGLWLAGQINGTTGYEEAAAQGVVAGLNAANRALEQDLVTFDRATAYLGVMIDDLITRGVSEPYRMFTSRAEYRLLLRADNADQRLTPRGIALGCVSADRASRYSDKQKRLEHAAALLKERTVTPQEAARLGVRVASDGVRRSLYALMAYAETDSPDWNVTGIDADTLAQIAVDAKYAPYVERQESDVAALRRDDALQLPSDLDYAALSGLSNELRGKLEATKPVTLGQASRIEGMTPAALTLLMMRARQLSDRRAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN2</accession>
    <name>A0A2M9PBN2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cold-shock protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11335</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000675">
        <property type="protein sequence ID" value="PJN94956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005829">
        <property type="term" value="C:cytosol"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04458">
        <property type="entry name" value="CSP_CDS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011129">
        <property type="entry name" value="CSD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002059">
        <property type="entry name" value="CSP_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00313">
        <property type="entry name" value="CSD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00050">
        <property type="entry name" value="COLDSHOCK"/>
    </dbReference>
    <dbReference type="SMART" id="SM00357">
        <property type="entry name" value="CSP"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51857">
        <property type="entry name" value="CSD_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CSD" evidence="1">
        <location>
            <begin position="2"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="CSD" evidence="1">
        <location>
            <begin position="93"/>
            <end position="158"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18462" checksum="321E0DD65B40E377" modified="2018-04-25" version="1">MMVRGRVKWFDTTKGYGFVVGEDGGGDILLHGNVLRVFGYSSVAEGAEIVLNVQQTDRGRQAVEVVEIVPTAGPPEAVASFLDPANGIAAGPLQPARVKWFDRVKGFGFINVYGKAEDVFLHMETLRQFGYGEVVAGDVLAVRVTAGPRGPMVYEVRSWDYVARLGDDVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP3</accession>
    <name>A0A2M9PBP3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000675">
        <property type="protein sequence ID" value="PJN94957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="244" mass="25889" checksum="8E8F6CF080C19000" modified="2018-04-25" version="1">MPDRKTLLLTGASRGIGHATVKRFSSVGWRVITCSRHPFPENCPWPAGPEDHIQVDLADPESTIAAVEEIRTRLPGGRLEALVNNAGISPKDEEGGRLSILTTDLRTWGKVFHVNFFAPVILARGLIAELAAARGAIVNVTSIAGARVHPFAGPSYATSKAALAALTREMAHDFGPMGIRVNAIAPGEIDTEILSPGTEELIGAIPLRRLGLPAEVAETIHFLCTQGSAYISGVEVEINGGQHV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC17</accession>
    <name>A0A2M9PC17_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000611">
        <property type="protein sequence ID" value="PJN95090.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95090.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8962" checksum="3495D0C139A8E892" modified="2018-04-25" version="1">MMLPLIRERVNAAMGPGTVGRVQITQGTGFAEPAAAFRPKAEPEPEPEVDLGEVEDTLSSIGDRDFRAALETLARNVLSRRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC45</accession>
    <name>A0A2M9PC45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Phosphoadenylyl-sulfate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_10670</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PAPS reductase family. CysH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000620">
        <property type="protein sequence ID" value="PJN95072.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004604">
        <property type="term" value="F:phosphoadenylyl-sulfate reductase (thioredoxin) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019379">
        <property type="term" value="P:sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01713">
        <property type="entry name" value="PAPS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00063">
        <property type="entry name" value="CysH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004511">
        <property type="entry name" value="PAPS/APS_Rdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002500">
        <property type="entry name" value="PAPS_reduct"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01507">
        <property type="entry name" value="PAPS_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000857">
        <property type="entry name" value="PAPS_reductase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00434">
        <property type="entry name" value="cysH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PAPS_reduct" evidence="3">
        <location>
            <begin position="44"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01507"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95072.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="274" mass="29848" checksum="F56EE489F22E86D6" modified="2018-04-25" version="1" fragment="single">MRLERAGNLEGAAIDRATALNLAFEGADPREVLAGAVAEFPGELAMVSSFGADSVVLLHMISQIDRSVPVLMIDTLMLFRETLDYQEEVAKRLGLNVVHLRPTGADLAAGDPDGRLHLTDTDACCEVRKVAPLERVEGRWPVTVTGRKRFQGSTRAALRHFEPEGTRLKVNPLAFWGSAEIRAYMDEHDLPRHPLVAKGFRSIGCAPCTSPVAEGEDERAGRWRGSNKVECGIHYGPDGRIGSRGKFPSRVRSQGHSCDDTLPHTSCCKAVGPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC90</accession>
    <name>A0A2M9PC90_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000579">
        <property type="protein sequence ID" value="PJN95156.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95156.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9963" checksum="4493430F8FF76AB0" modified="2018-04-25" version="1">MTCAKEPTDVELLATAAAIARTGRKVIEATDRTSFKDVGETLDALHEHLAVAGGSLLILAERLGWEAEVKRLLAEGKARIDAFRACANMEGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC7</accession>
    <name>A0A2M9PCC7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000576">
        <property type="protein sequence ID" value="PJN95162.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95162.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9456" checksum="FE198ACB68164D5A" modified="2018-04-25" version="1">MMPEFFVISPQKASSLRTATAPDADLAEPGHALDPRRIEAGEHAGKYAVPTRCLGDRAFERLADRFEGLVVADLEISEAWPAMEEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN1</accession>
    <name>A0A2M9PCN1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lactamase_B domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09295</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000510">
        <property type="protein sequence ID" value="PJN95300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00753">
        <property type="entry name" value="Lactamase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014832086" description="Lactamase_B domain-containing protein" evidence="2">
        <location>
            <begin position="25"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="domain" description="Lactamase_B" evidence="3">
        <location>
            <begin position="77"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="261"/>
            <end position="325"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="273"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="291"/>
            <end position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00753"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="325" mass="33585" checksum="B6972E7DB336B150" modified="2018-04-25" version="1">MAKALSASTIAALAVLVAAPAAQAAPCLIATLTGTQSGPPAFDGLAGSGTLVRYGDDANDCSDVLLQFDAGRGTVMRLSQVGVQPMDLDAVFITHIHSDHVEGFSDIAQLRWFFGSQLPKLDVVCSDDAPSPAGFVLSCRKFVAHIGDAYLLSGATAQQATEMDGLDPAGPAPLMNVIAFTPTDDAQVVWTSGEVAVSAIRSTHIPGHASFRVDTPAGSVVIGGDASNDVTAPPRDTSTSAQVEKLAEGADIIVHSAVHPDLAPEKGSGMPPLVSTSVPSMSNTTSRKLSPPRTDRSERRRDASRTDPRSAPCARAAARPRAVPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN3</accession>
    <name>A0A2M9PCN3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">2,5-didehydrogluconate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09500</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000524">
        <property type="protein sequence ID" value="PJN95262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020471">
        <property type="entry name" value="AKR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018170">
        <property type="entry name" value="Aldo/ket_reductase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023210">
        <property type="entry name" value="NADP_OxRdtase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036812">
        <property type="entry name" value="NADP_OxRdtase_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43827">
        <property type="entry name" value="PTHR43827"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00248">
        <property type="entry name" value="Aldo_ket_red"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000097">
        <property type="entry name" value="AKR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00069">
        <property type="entry name" value="ALDKETRDTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51430">
        <property type="entry name" value="SSF51430"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00798">
        <property type="entry name" value="ALDOKETO_REDUCTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00062">
        <property type="entry name" value="ALDOKETO_REDUCTASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldo_ket_red" evidence="4">
        <location>
            <begin position="14"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="1">
        <location>
            <position position="47"/>
        </location>
    </feature>
    <feature type="binding site" evidence="2">
        <location>
            <position position="105"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="site" description="Lowers pKa of active site Tyr" evidence="3">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR000097-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="275" mass="29928" checksum="CD496E53A4CC9665" modified="2018-04-25" version="1">MHIVPANGANIPALGFGTFRMTEDEVLSILPAALAAGFRHVDTAQIYKNEAAVGEALEEAGVPRSEIFLTTKVWVSNFAHDAFLASVEDSLKKLRTDHVDLLLLHWPGGSEVPHAEQIESLNEVQRRGWTRHVGVSNYNVAQMADAIRQSPAKIATNQVEYHPWLDQSKLLAAARAAGVSVTAYYAMADGKSARDPVLAEIGRAHGKSAAQVALRWLVQQPDVVALSKTAKVSRLGENMAVFDFELSEEEMARIFALASPEGRIVSPKELAPAWD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS3</accession>
    <name>A0A2M9PCS3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Copper oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09020</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000491">
        <property type="protein sequence ID" value="PJN95345.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd13896">
        <property type="entry name" value="CuRO_3_CopA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001117">
        <property type="entry name" value="Cu-oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011706">
        <property type="entry name" value="Cu-oxidase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045087">
        <property type="entry name" value="Cu-oxidase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002355">
        <property type="entry name" value="Cu_oxidase_Cu_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034279">
        <property type="entry name" value="CuRO_3_CopA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11709">
        <property type="entry name" value="PTHR11709"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00394">
        <property type="entry name" value="Cu-oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07731">
        <property type="entry name" value="Cu-oxidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00080">
        <property type="entry name" value="MULTICOPPER_OXIDASE2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Plastocyanin-like" evidence="3">
        <location>
            <begin position="97"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="domain" description="Plastocyanin-like" evidence="4">
        <location>
            <begin position="236"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00394"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07731"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95345.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="354" mass="37711" checksum="5F42B27B6A8A1FC6" modified="2018-04-25" version="1" fragment="single">VMFLHDFSFKSPEEVLAEISGGYGAGHAAAAEASPRQGVPMEGLGGMPGMGHGGMGHGAMGGMAMGNMPGMGGMMDMGGMAMDLNDYNWDAYLANDRTLSDPEVVRVERGGRIRLRVINAAAATVFWIDTGAAEARLVAVDGHAVQPIAGSRFGLAMGQRLDIEIDLPNEGGAWPIIALREGARERTGLILATQGAEVQRLDAVAESEAPAFDTDLAQEARLVALNALPDRPVDRSQMLMLGGSMQPYLWTINGAVWGQHQPITARSGERVVLSFHNMSMMAHPMHLHGHVFQVVGLNGRRVAGALRDTVHVPPMSRVDVALDAGEAARWMLHCHHMPHLASGMMTEFAVTASV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD03</accession>
    <name>A0A2M9PD03_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GNAT family N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000458">
        <property type="protein sequence ID" value="PJN95421.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95421.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7345" checksum="B4B36E9BA8E680FC" modified="2018-04-25" version="1" fragment="single">MTFRIHPAETPEDVEDARRLFRAYVDSLGIDLGFQDVETELATLPGKYAPPGGAILLARDAGGRAVGCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD35</accession>
    <name>A0A2M9PD35_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000444">
        <property type="protein sequence ID" value="PJN95457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="6867" checksum="89DBE7A8B4AD25D1" modified="2018-04-25" version="1" fragment="single">HDAVLTATALGDARALNRGGLIRPEGFAGVLGRYRFLADGRCQRDLVVLTLENGEIVTIGEVTGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG5</accession>
    <name>A0A2M9PDG5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Sugar ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the ABC transporter superfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000397">
        <property type="protein sequence ID" value="PJN95564.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TOBE_2" evidence="2">
        <location>
            <begin position="89"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95564.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18149" checksum="F90B34DB8CACD318" modified="2018-04-25" version="1" fragment="single">LRVQTRLEIAKLHHEMDNVTMIYVTHDQVEAMTLADRICVLRDGVVEQVGTPAELYDRPNSLFVAGFIGSPKMNFLTGPIAEGHGCHTLGVRAEHIDVVEEGAAWTGTVVHAEDLGSDNFLFVDIGAGEPVVVRQPGKLHIGYGATLGLRPAPDHLHRFDKAGAPLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP0</accession>
    <name>A0A2M9PDP0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000367">
        <property type="protein sequence ID" value="PJN95632.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032423">
        <property type="entry name" value="AAA_assoc_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008921">
        <property type="entry name" value="DNA_pol3_clamp-load_cplx_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021886">
        <property type="entry name" value="MgsA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16193">
        <property type="entry name" value="AAA_assoc_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12002">
        <property type="entry name" value="MgsA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48019">
        <property type="entry name" value="SSF48019"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_assoc_2" evidence="2">
        <location>
            <begin position="4"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="MgsA_C" evidence="1">
        <location>
            <begin position="69"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95632.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="243" mass="26626" checksum="64B5846D7A3B4C9F" modified="2018-04-25" version="1" fragment="single">TPGAAALMIGMADGDGRALLNLVEQVAAERETLDEAGLQKRVTRRAPVFDKSGDSHYNLISALHKSVRGSDPDASLYWLARMLEGGEDPRYLARRITRMAVEDIGQADPQAAQICLTAWETYERLGSPEGELALAQAVIHLALAPKSNAGYAAFKAARRAAKRTGSLPPPKHILNAPTRLMQDEGYGAGYVYDHDTADAFSGQDYFPEEMEPERFYAPTGRGAEGRIKARLDDLRARREKREG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDS5</accession>
    <name>A0A2M9PDS5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000339">
        <property type="protein sequence ID" value="PJN95705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16786" checksum="EE44371F5DD848C3" modified="2018-04-25" version="1" fragment="single">RRSSGRTRRDEPYAGHASAPVEVVVADGAGTADRIRALTGGKGADVVFNTVGDPFYEIGQKSMAVKGRAIFISAVDRFVTLDLLAFYKGRHTYVGIDTIALNSVETGAILRALVPGFAAGVLRPFPIEPGAVYPLEEAHAAYQAVMGSSRDRVVLVPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT8</accession>
    <name>A0A2M9PDT8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Polyhydroxyalkanoate depolymerase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06855</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000334">
        <property type="protein sequence ID" value="PJN95717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009656">
        <property type="entry name" value="PHB_depo_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010915">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06850">
        <property type="entry name" value="PHB_depo_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF020818">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01849">
        <property type="entry name" value="PHB_depoly_PhaZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PHB_depo_C" evidence="1">
        <location>
            <begin position="202"/>
            <end position="401"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="404" mass="45672" checksum="9EF13B1966B4659E" modified="2018-04-25" version="1">MLYATYQLQDDLTAMVRRAARWAHQAGMPPAWGPFAPFKPRVAAALELISRFHLTHVRPEFAIKSVPVGNREAPVTEEFVLELPFGKLLHFAKDVDTPQPKVLVVAPLSGHFATLLHNTVEVLLRDHDVYITDWTNARDVPVSAGAFGVEDYVEYVIRFLEEMGTSTHVLAVCQPCVQTLAAVALMSQDKNPATPRSMTLMAGPIDVRESPTAVNDLANDKPLSWFRNNVISRVPWRFRGGGRRVYPGFMQLIAFVSMNVERHKAQHQKLYDHLAKGEVEEARKIKDFYDEYFAVLDMTEEFFLETIDRVFQKAELAKGEFTVRGRRVDPGAIRNTALLTVEGGRDDICSLGQTAAAHDLCSSLRPHLRRHHLQANSGHYGVFSGRRWEREIYPVVRNMILAME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE30</accession>
    <name>A0A2M9PE30_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-xylose ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06325</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000298">
        <property type="protein sequence ID" value="PJN95805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="42"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16770" checksum="F556EF672A2790C5" modified="2018-04-25" version="1" fragment="single">RANIALASLGRMNRLGVIDEAACAAAAGDYIRRLAIRTPSDRQEVRNLSGGNQQKVVMAKWLLRDCDILIFDEPTRGIDVGAKSEIYRLLQTLAAEGKAIIVISSELPEVLRLSHRIAVMCEGRLTGFLPGGAATTQEDIMRLATLRPDVTEGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE85</accession>
    <name>A0A2M9PE85_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Amino acid ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06025</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000281">
        <property type="protein sequence ID" value="PJN95859.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014967969" evidence="2">
        <location>
            <begin position="20"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="21"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="4">
        <location>
            <begin position="21"/>
            <end position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95859.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="26796" checksum="84A501C048571D77" modified="2018-04-25" version="1">MKHLVAALAWAALAFPAAAETIRVGMSGGYFPFTFVRQDQLQGFEVDFMNAVAAQTGDTVEFSTMAFSGLIGALSAGRIDTVANQITVTPEREAQFVFTQPYVYDGAQVVVREGSEGIAGVEDLRGKTVAVNLGSNFEQLLRELPFATEITIKTYESNIEQDTALGRVDAFVMDRVSSAQVIAESPLPLQLAGPPFSEIRNALPFRNDEAGRAMRDKVDAAITTLKETGKLREISEKWLGADVTIPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH3</accession>
    <name>A0A2M9PEH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000247">
        <property type="protein sequence ID" value="PJN95950.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001845">
        <property type="entry name" value="HTH_ArsR_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01022">
        <property type="entry name" value="HTH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00778">
        <property type="entry name" value="HTHARSR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00418">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50987">
        <property type="entry name" value="HTH_ARSR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH arsR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95950.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="12020" checksum="D216CB5D742F4523" modified="2018-04-25" version="1">MADQAKRVAGFLKSLASEHRLLILCRLAEGEASVAQLIAATGVAPTSMSQHLAKLKGEGVVAVRRDHRSLHYRIDHPAALEVMRTLYRHFCAEAEERPEGPGAGPGGRLSPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH4</accession>
    <name>A0A2M9PEH4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000247">
        <property type="protein sequence ID" value="PJN95949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="97"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="120"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="150"/>
            <end position="171"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="20213" checksum="253293C83AA30318" modified="2018-04-25" version="1" fragment="single">MLSADWLRRHSLEIQFWGYETGNIVASITGAGGLRAFVDSLVEAHRSIGLHPGAMALWLAREHPETFATLGVMAIVVIAFPLGSAVERRFGARAADAVNALAVPLALGLLAFAIARNANLFTVAACAFIVGSCLLRGAGHFPLLLKLGGLALSFGGLTLAGAGVMVLSVALFGAGPLGTALAACTFLTGVFVTGAGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL2</accession>
    <name>A0A2M9PEL2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Dihydrolipoamide succinyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000238">
        <property type="protein sequence ID" value="PJN95979.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95979.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5252" checksum="14282F809E6F869A" modified="2018-04-25" version="1" fragment="single">MAEVRVPTLGESVTEATVATWFKKVGDAVKVDEMLCELETDKVTVEVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER1</accession>
    <name>A0A2M9PER1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sigma-54-dependent Fis family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_05020</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000223">
        <property type="protein sequence ID" value="PJN96021.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025944">
        <property type="entry name" value="Sigma_54_int_dom_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00688">
        <property type="entry name" value="SIGMA54_INTERACT_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="3">
        <location>
            <begin position="3"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="2">
        <location>
            <begin position="141"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="52"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="372"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96021.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="372" mass="40870" checksum="6E2770BA6F5D508F" modified="2018-04-25" version="1" fragment="single">MTDILVVDDERDIRALIADILEDEGHGVRMAWDSDTAFAEIDKAAPDLIILDIWLKDSRLDGIDILKKVRRDNPAIPVVIISGHGNIEIAVGAIKQGAYDFIEKPFNIDQLMVVINRALETSRLRRENVALRGKDGAPPAMIGASAAFRQLKGHLDKVARTNSRVLLTGPAGCGKEVAARYLHAHSERSKGPFVVVSSASIGADQMEEVLFGRESPESGVEPGLLERAHTGVLFFDEIADMPMGTQSKILRVLVDQAFQRVGGGHVVRVDVRVISATTRDLVKEVAAGRFRNELFHRLNVVPVSVPELEARRDDIPLLARHFLEELNATQGLPLRQLSPEAEAQLQTLRWPGNVRQLRNTLERALILGGDAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ0</accession>
    <name>A0A2M9PEZ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_04530</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000195">
        <property type="protein sequence ID" value="PJN96103.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="5">
        <location>
            <begin position="22"/>
            <end position="488"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="257"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="296"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96103.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="501" mass="54559" checksum="65A132C27AC13090" modified="2018-04-25" version="1">MFDSPNKAPFKEKYDNFIGGEWRAPDSGAYFENVSPITGQVVGRIARSNAADVEAALDAAHAAKDAWGKTSAAERARILNLIADRMEANLATIAEAETWDNGKPIRETMAADIPLAIDHFRYFAGAVRAQEGSLSEIDHDTVAYHFHEPLGVVGQIIPWNFPILMAVWKLAPALAAGNCVVLKPAEQTPASIMVLVEIIGDLLPAGVLNVVNGFGLECGKPLASSPRIAKIAFTGETTTGRLIMQYASQNLIPVTLELGGKSPNIFFADVMAEDDDYLDKALEGFTMFALNQGEVCTCPSRALIHESIYERFIEKAIARVKKVSQGHPMDPSTMIGAQASSEQLEKILAYIDIGRQEGAEVLTGGVRTELEGDLAGGFYVTPTVFKGHNKMRIFQEEIFGPVLSVTTFKDDAEALEIANDTLYGLGAGVWTRDGARAYRFGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNMLVSYSPKALGFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEZ8</accession>
    <name>A0A2M9PEZ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04675</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000203">
        <property type="protein sequence ID" value="PJN96082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="15573" checksum="7EDA87785754198A" modified="2018-04-25" version="1">MFSAAWFCAGFAIGGAMALLVVAVMISARDPSAERARPRPAGNVVPFPAEGVVMAERTFVTAGDVAHIMGLTSASAFLTRRTALEATRGFPSPVPWSKRPLMWRRDSVQRWVDALGEVPSAALDLLPDQADAARRVVMLHQARTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF02</accession>
    <name>A0A2M9PF02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NAD(P)-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04480</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000193">
        <property type="protein sequence ID" value="PJN96111.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96111.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="262" mass="27217" checksum="AB75054BF8906528" modified="2018-04-25" version="1">MTGLDRPIAVVTGGAGGIGRVICRTLTEQGWRVVVCDINLEGAETVAETVGGVARRIDITDAPGVDAAVSEIEGSVGPVAGVVHSAATFGELKPAEEVPMADWDRITGLVHRGTYVVSVAFARRMASRGKGSFVALSSWNGVASARMHAYCSSKAAVNLLVESMAMEWGRSGVRFNVVSPGVVMTERVAERIRIGTRYTADPIEMTALGRLVTSEEVAEAAAFLLSDKASGITGANLLVDTGTTISQAWALFGGVPGPRGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF84</accession>
    <name>A0A2M9PF84_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 10">Adenylosuccinate lyase</fullName>
            <shortName evidence="10">ASL</shortName>
            <ecNumber evidence="4 10">4.3.2.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9 10">Adenylosuccinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_03990</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate = 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide + fumarate</text>
            <dbReference type="Rhea" id="RHEA:23920"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:58443"/>
            <dbReference type="ChEBI" id="CHEBI:58475"/>
            <dbReference type="EC" id="4.3.2.2"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="7">
            <dbReference type="Rhea" id="RHEA:23921"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>N(6)-(1,2-dicarboxyethyl)-AMP = AMP + fumarate</text>
            <dbReference type="Rhea" id="RHEA:16853"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:57567"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="4.3.2.2"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="8">
            <dbReference type="Rhea" id="RHEA:16854"/>
        </physiologicalReaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 10">Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 2/2.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 10">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 10">Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.2.2" evidence="4 10"/>
    <dbReference type="EMBL" id="PHNO01000169">
        <property type="protein sequence ID" value="PJN96191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00132"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00075">
        <property type="reaction ID" value="UER00336"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070626">
        <property type="term" value="F:(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004018">
        <property type="term" value="F:N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044208">
        <property type="term" value="P:'de novo' AMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.275.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019468">
        <property type="entry name" value="AdenyloSucc_lyase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024083">
        <property type="entry name" value="Fumarase/histidase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020557">
        <property type="entry name" value="Fumarate_lyase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000362">
        <property type="entry name" value="Fumarate_lyase_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022761">
        <property type="entry name" value="Fumarate_lyase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008948">
        <property type="entry name" value="L-Aspartase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004769">
        <property type="entry name" value="Pur_lyase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10397">
        <property type="entry name" value="ADSL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00206">
        <property type="entry name" value="Lyase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00149">
        <property type="entry name" value="FUMRATELYASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00998">
        <property type="entry name" value="ADSL_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48557">
        <property type="entry name" value="SSF48557"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00928">
        <property type="entry name" value="purB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00163">
        <property type="entry name" value="FUMARATE_LYASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10 12" id="KW-0456">Lyase</keyword>
    <keyword evidence="6 10" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADSL_C" evidence="11">
        <location>
            <begin position="351"/>
            <end position="431"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004734"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012339"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00017058"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00024477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024487"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00030717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU361172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="432" mass="47964" checksum="76998E529F6DAA46" modified="2018-04-25" version="1">MIPRYSRPEMVAIWSPETRFRIWFEIEAHAADAQAALGVIPKASAQAIWTARDVEFDVARIDEIEAVTKHDVIAFLTHLGEHIGDEARFVHQGMTSSDVLDTCLNVQLTRAADILLADLDALLAALKRRAYEHKDTVTIGRSHGIHAEPTTFGVKLAQAYAEFSRGRARLEAARAEVATCAISGAVGTFANISPQVEEHVAHAMGLTPEPVSTQVIPRDRHAMFFATLGVIASSIERLAVEIRHLQRTEVLEAEEYFSPGQKGSSAMPHKRNPVLTENLTGLARLVRMAVVPAMENVALWHERDISHSSVERAIGPDATVTLDFALARLTGVIDRLVVYPETMLKNMNKFRGLIHSQRILLALTQKGVSREDSYALVQRNAMKVWEQGKDFQEELLADADVRKALSEAEIAELFDLGYHTKHVDTIFKRVFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFM1</accession>
    <name>A0A2M9PFM1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03110</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000125">
        <property type="protein sequence ID" value="PJN96341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015276">
        <property type="term" value="F:ligand-gated ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001320">
        <property type="entry name" value="Iontro_rcpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001638">
        <property type="entry name" value="Solute-binding_3/MltF_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00497">
        <property type="entry name" value="SBP_bac_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00062">
        <property type="entry name" value="PBPb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00079">
        <property type="entry name" value="PBPe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014844954" evidence="2">
        <location>
            <begin position="27"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="PBPb" evidence="3">
        <location>
            <begin position="29"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="PBPe" evidence="4">
        <location>
            <begin position="29"/>
            <end position="255"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="SMART" id="SM00062"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00079"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="260" mass="27702" checksum="8F930CF7505E8C03" modified="2018-04-25" version="1">MSILRSAALGLALGLSLGGLALPALAQDKIVIGTEAAYPPFAYVLPSGELEGFDISIAKALCVEMKADCTIVNQAFDGLIPALNAKKIDAIIASMFVTEERLKAIDFAGPYYSVPGIFVAPKDTELELTEDSLGRRVTIGVQRGTTFPNYLKANFPKARIQFYDTIDAAKLDLTSGRVDLVFADSVVLEDFLKSKDGETFAVLGEPVYDAELLGAGAGIGLRKGDTALKEKFDTALAALIASGEYKKINDQFISVDIAPK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFQ6</accession>
    <name>A0A2M9PFQ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_02925</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000114">
        <property type="protein sequence ID" value="PJN96376.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015408">
        <property type="term" value="F:ABC-type ferric iron transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd03259">
        <property type="entry name" value="ABC_Carb_Solutes_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015853">
        <property type="entry name" value="ABC_transpr_FbpC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 6 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="3 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="7">
        <location>
            <begin position="4"/>
            <end position="241"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="42"/>
            <end position="49"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="272"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96376.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="29807" checksum="C2771C3E743E6A45" modified="2018-04-25" version="1" fragment="single">MAEITLSNLRHSYEGDLSDPSRLALKGVDHVWRDGGAYALLGPSGCGKSSMLNIISGLIRPTAGRVLFDGRNVTDLSPEQRNIAQVFQFPVLYDTMTVEQNLAFPLKNRRVEPARIARRVAEVAEMLDLGPLLKRRAAGLGAAEKQKISLGRGLVREDVAAILFDEPLTVIDPQVKFDLRRKLKLVHETLKLTLVYVTHDQSEALTFADQVVVMSEGEVVQVGTPEELYERPQHTFVGHFIGSPGMNFLPCALEGARIVFDGGSLPAPRGVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS5</accession>
    <name>A0A2M9PFS5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000115">
        <property type="protein sequence ID" value="PJN96372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8245" checksum="64A8E63F056849CD" modified="2018-04-25" version="1">MALPKLLRFMLTHIANGMALGSAFLLGMIWFDLLGIGTLLAKDHTGLATAVLFFQTSMTFGAVAMAVAVMNLGERED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU6</accession>
    <name>A0A2M9PFU6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Enoyl-[acyl-carrier-protein] reductase [NADH]</fullName>
            <ecNumber evidence="7">1.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_02635</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10240"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9926"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78785"/>
            <dbReference type="EC" id="1.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000102">
        <property type="protein sequence ID" value="PJN96425.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004318">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016631">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05372">
        <property type="entry name" value="ENR_SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014358">
        <property type="entry name" value="Enoyl-ACP_Rdtase_NADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43159">
        <property type="entry name" value="PTHR43159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000094">
        <property type="entry name" value="Enoyl-ACP_rdct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 7 10" id="KW-0520">NAD</keyword>
    <keyword evidence="4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="162"/>
        </location>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="20"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="26"/>
            <end position="27"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <begin position="71"/>
            <end position="72"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="99"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="102"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="169"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96425.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="261" mass="27655" checksum="4950D512DF1775A1" modified="2018-04-25" version="1">MADAEPAGGLMAGRRGLVLGVANDQSIAYGCARAYRHLGADLAVTYLNEKARRFVEPCAEAVGASILAPLDVTEAGQMEAVFDTIAETWGRLDFVLHSIAFAPMQDLHGRVVDCSREGFSMAMDVSCHSFIRMAKLAESLMDRGGALQTMSYFGSEKVVEHYNIMGPVKAALESTSRYLAAELGPKGIRVHAISPGPLKTRAASGIAEFDALLNKAAERAPARALVDIDDVGAAAAYLCTDAAHLITGNVVYIDGGYNIMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX7</accession>
    <name>A0A2M9PFX7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphoribosylformylglycinamidine cyclo-ligase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">AIRS</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_02500</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000096">
        <property type="protein sequence ID" value="PJN96446.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004641">
        <property type="term" value="F:phosphoribosylformylglycinamidine cyclo-ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016188">
        <property type="entry name" value="PurM-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036921">
        <property type="entry name" value="PurM-like_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004733">
        <property type="entry name" value="PurM_cligase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10520">
        <property type="entry name" value="PTHR10520"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00586">
        <property type="entry name" value="AIRS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55326">
        <property type="entry name" value="SSF55326"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0436">Ligase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AIRS" evidence="3">
        <location>
            <begin position="62"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00020367"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00033093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96446.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="13947" checksum="7B294EB97A0D6CEF" modified="2018-04-25" version="1" fragment="single">MTEKPKGLSYADAGVDIAAGNALVERIKPAAKRTDRSGVMSGLGGFGALFDLRAAGYRDPVLVAATDGVGTKLKLAIETGRLDTVGIDLVAMCVNDLICQGAEPLFFLDYFATGRLEVAEAAAIVGGIAEGCVRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFY3</accession>
    <name>A0A2M9PFY3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acetylornithine deacetylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02620</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000101">
        <property type="protein sequence ID" value="PJN96432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8278" checksum="113B36CE65775D94" modified="2018-04-25" version="1" fragment="single">PEPDGAAERLARQLTGHNGVEVVSYQAEAGQFQERGLSTVICGPGSIEQAHQPDEFISLSQLEAGAAFMDRLIARLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG35</accession>
    <name>A0A2M9PG35_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02115</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000077">
        <property type="protein sequence ID" value="PJN96511.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96511.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="158" mass="16745" checksum="ADFF6D443623D745" modified="2018-04-25" version="1">MSGLGMIDAEAEDFSDALAVPLRPHRLRKVSDVVALLKHGGAWDDLDWLVLTAQDSEDASLRNLRNPAQGLTPVGGPTFAADRGWLGNGADAYLGGGDVYADLELTGWAGPAGRTAMRRVQSPHVSDRFVAFYAGRNLTPGSVALIDNALARYLDALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG53</accession>
    <name>A0A2M9PG53_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase</fullName>
            <ecNumber evidence="2">2.7.13.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02165</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + protein L-histidine = ADP + protein N-phospho-L-histidine.</text>
            <dbReference type="EC" id="2.7.13.3"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.13.3" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000080">
        <property type="protein sequence ID" value="PJN96499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd00130">
        <property type="entry name" value="PAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000014">
        <property type="entry name" value="PAS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035965">
        <property type="entry name" value="PAS-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004358">
        <property type="entry name" value="Sig_transdc_His_kin-like_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00344">
        <property type="entry name" value="BCTRLSENSOR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55785">
        <property type="entry name" value="SSF55785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Histidine kinase" evidence="4">
        <location>
            <begin position="132"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012438"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="367" mass="39393" checksum="91ACA945298B6989" modified="2018-04-25" version="1">MNFESLWGALPYPALVIAPDDTICGANPAAEVFGGTSARQMQGKALGKYLGEDSVVLDVVRQARRGGVSVAQYEVTVGWSDQPPQLQNIHAAPLQEMEGVLLLMHPQGLAEKMDRSLGHRSAARSVTGMAAMLAHEIRNPLAGISGAAQLLEMGLGDADRELTSLIQTEAARIGKLVDRVEQFGDLRPAQRKPINIHDILDRARRAAKAGFASHARFFEDYDPSLPPTAGDPDQLLQVFQNLMKNAAEAIPRVGGTITVTTAYRPGVKMQRPGGASESLPLLVTITDNGLGVPETLLRDIFDPFVSSKVNGTGLGLSLVSKFIADHGGVVECDSRPGRTRFHVRLPVWHGAAPEDDETYEPVSKAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG66</accession>
    <name>A0A2M9PG66_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Carbonic anhydrase</fullName>
            <ecNumber evidence="3 6">4.2.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Carbonate dehydratase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01975</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Reversible hydration of carbon dioxide.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>H(+) + hydrogencarbonate = CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:10748"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="EC" id="4.2.1.1"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the beta-class carbonic anhydrase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.1" evidence="3 6"/>
    <dbReference type="EMBL" id="PHNO01000072">
        <property type="protein sequence ID" value="PJN96533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004089">
        <property type="term" value="F:carbonate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015976">
        <property type="term" value="P:carbon utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1050.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001765">
        <property type="entry name" value="Carbonic_anhydrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015892">
        <property type="entry name" value="Carbonic_anhydrase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036874">
        <property type="entry name" value="Carbonic_anhydrase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11002">
        <property type="entry name" value="PTHR11002"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00484">
        <property type="entry name" value="Pro_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00947">
        <property type="entry name" value="Pro_CA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53056">
        <property type="entry name" value="SSF53056"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00705">
        <property type="entry name" value="PROK_CO2_ANHYDRASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="216" mass="23693" checksum="A0CFADEB14629AD9" modified="2018-04-25" version="1">MQIASPLPTFLIDRYRDWQTQMSKPERSKLATLAVYGQRPRAMIVACCDSRVMVTDVFGGEAGDFFVHRNIANLVPACMADDAARGTSATIEYAVKVLNIDHLIVMGHFGCGGVAGCLDMLSGHPGGPDPESFVGKWLAILGPGYDRVEAQKLDRSSALRALEHQAILVSLENLMTFPFVSERVEEGKLFLHGIWKDISDGGLEYYSAEKNDFVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG82</accession>
    <name>A0A2M9PG82_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GguC protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000084">
        <property type="protein sequence ID" value="PJN96484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.850.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036663">
        <property type="entry name" value="Fumarylacetoacetase_C_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56529">
        <property type="entry name" value="SSF56529"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="240" mass="25594" checksum="8CA00FBB3F4D4CB2" modified="2018-04-25" version="1" fragment="single">LTHTGSASARDAMHANPEGLSDSMKMFRLGVEGGKPGPGRAGVQPEWFYKGTGVQAVAPGDPLFSPAFALDGGEEPEIAGYYLIGADGRPWRVGFSLANEFSDHVTERINYLYLAHSKLRPAALGPELLVGDLPQDIRGVSRIRRGEVTVWEKPFLSGEANMSHTIANLEHHHFKYALFRQPGDLHVHMFGTATLSFADGVTAEPGDVFEIEAAAFGLPLANPLAVEAGAPDAPVLVGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG83</accession>
    <name>A0A2M9PG83_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01865</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000068">
        <property type="protein sequence ID" value="PJN96550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014650803" evidence="2">
        <location>
            <begin position="19"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="240"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="448" mass="48194" checksum="8115F9CCB7F0F6F8" modified="2018-04-25" version="1">MALAIGLTAAIFGQQALAACEAPPLDGPAAWLPVTPFPELGEPAPHPASDCPFYEAAWQTFLHVAQPDAAGDPAFLGYPRIETLFEPVGPAPDPAADPFGADLASGVQQAGMGGILIDRNGAPVYYAMHFNDRFADFVAHNGLSTREGILAADPDLSFDAPGIVELKSGWRVLDASDDRSAFFWKDVDVPMLRATEAGIEIDPSGATHRVTVGLVALHVVFTMEGHPEFVWATFEHVDRAKQPDGGPTATHNPEDTPEDFVAHPDRSFPFYRAGSEAQHSNLNGLSDPAEMARAFDERTQTFTANGGLHTPVFREYPASKVSTTEVDEAILELNASLWGQFAAIDPEGRDPRGHYALVGATWLDRPDRDFAVGRYFVNGPDETSDTGPVAGEDALSNLMMESFTQTVFPNCLSCHDTREVYSTEGGEIVAAKNINVSHAFSHYLSGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB7</accession>
    <name>A0A2M9PGB7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Polyamine ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01605</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000058">
        <property type="protein sequence ID" value="PJN96595.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="16"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="134"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="164"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="212"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="268"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="99"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96595.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="33110" checksum="007C48E8625FBFBD" modified="2018-04-25" version="1">MALPVYATPLERLWRVVYLVLCGLIFLFLIAPILIVIPLSFNVEPYFTFTEKMLRLDPSGFSLRWYDELLTLGMQNASAPRDGAWWADVWRNAAWVNAAKNSVIIGFFATILATVLGTVAALGLSRPEMPFRRLIMAALISPMIVPIIITATGLFFFYSATGLAGAYVGIILAHATLGIPFVIITVTATLVGFDQSLNRAALSLGASPTRTFFKVTMPLIMPGVISGALFAFVTSFDEVVVVLFVAAHDQQTIPRQMWNGIREQISPAILAVATILVVVSVALLTVLELLRRRGERLRGVTPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF3</accession>
    <name>A0A2M9PGF3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Peptide ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_01470</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000052">
        <property type="protein sequence ID" value="PJN96620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025966">
        <property type="entry name" value="OppC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12911">
        <property type="entry name" value="OppC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="171"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="215"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="286"/>
            <end position="313"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="333"/>
            <end position="355"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="7">
        <location>
            <begin position="167"/>
            <end position="359"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="369" mass="41152" checksum="571A47517E9D7C78" modified="2018-04-25" version="1">MRLTPLQRRRLANFKANRRAFWSLWIFLAIFTVTLFAEFVANDRPLVVRFEGEWRFPIFQFYSEADFGGEFQTEAEYASPEVRCLIASGGLEACLDDPEGTLEQIPTGAVDGAPISNPGWALWPPIPYAYDTVNYGVTTAPSAPDRAHWLGTDDQTRDVVARVIYGFRISVLFALTVAAISSLIGITAGAVQGYFGGWLDLFLQRVVEVWLNMPTLYIIIILSAIFTMNFWLLTLLIAFFSWTSLVGVVRAEFLRARNFEYVRAAKALGVSDAVIMWRHVLPNAMVATLTLMPFLITGAIGGLAALDFLGLGLPPSYPSLGELALQGKNRLNAPWLGFTAFFTFAIMLSLLVFIFEGVRDAFDPRKTFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR5</accession>
    <name>A0A2M9PGR5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00770</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000024">
        <property type="protein sequence ID" value="PJN96737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032823">
        <property type="entry name" value="BCA_ABC_TP_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12399">
        <property type="entry name" value="BCA_ABC_TP_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="2"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="260" mass="28452" checksum="8D6C51E8D347BE4C" modified="2018-04-25" version="1">MIRVDDLHMHFGGLRAVDGASIEIGKGTITGLIGPNGAGKTTLFNVIAGHYTPTSGHVFLDGEEITGLPPHDLFHKGLLRTFQIAHEFGTLSVRENLMMVPPEQPGEALWDAWFRPGRVRAREAEVRARADEVIDFLEIPHVADEFAGNLSGGQKKLLELGRTMMVDAKIVFLDEVGAGVNRTLLNTIGDAILRLNRERGYTFCMIEHDMDFIGRLCDPVIVMAEGKVLAEGTAAEVKSNEAVIEAYLGRGLRNKPKAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU9</accession>
    <name>A0A2M9PGU9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="17">Nitrite reductase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">CNY89_00970</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1 11">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Nitrogen metabolism; nitrate reduction (assimilation).</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000033">
        <property type="protein sequence ID" value="PJN96704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00653"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008942">
        <property type="term" value="F:nitrite reductase [NAD(P)H] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042128">
        <property type="term" value="P:nitrate assimilation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007419">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023753">
        <property type="entry name" value="FAD/NAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016156">
        <property type="entry name" value="FAD/NAD-linked_Rdtase_dimer_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012744">
        <property type="entry name" value="Nitri_red_NirB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017121">
        <property type="entry name" value="Nitrite_Rdtase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006066">
        <property type="entry name" value="NO2/SO3_Rdtase_FeS/sirohaem_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041575">
        <property type="entry name" value="Rubredoxin_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04324">
        <property type="entry name" value="Fer2_BFD"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07992">
        <property type="entry name" value="Pyr_redox_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18267">
        <property type="entry name" value="Rubredoxin_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037149">
        <property type="entry name" value="NirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00397">
        <property type="entry name" value="SIROHAEM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02374">
        <property type="entry name" value="nitri_red_nirB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00365">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6 11" id="KW-0274">FAD</keyword>
    <keyword evidence="5 11" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="4" id="KW-0349">Heme</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10 11" id="KW-0534">Nitrate assimilation</keyword>
    <keyword evidence="7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Pyr_redox_2" evidence="15">
        <location>
            <begin position="3"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="domain" description="Rubredoxin_C" evidence="16">
        <location>
            <begin position="314"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="14">
        <location>
            <begin position="418"/>
            <end position="466"/>
        </location>
    </feature>
    <feature type="domain" description="Fer2_BFD" evidence="14">
        <location>
            <begin position="481"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR_ferr" evidence="13">
        <location>
            <begin position="556"/>
            <end position="620"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="12">
        <location>
            <begin position="630"/>
            <end position="768"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005096"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRNR" id="PIRNR037149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF04324"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF07992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="16">
        <source>
            <dbReference type="Pfam" id="PF18267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN96704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="813" mass="87896" checksum="9A804F1D1417A035" modified="2018-04-25" version="1">MEKLVVIGAGMASGRALEHLFEADPDRFEVTLFNGEPRGNYNRLMLSPVLSGEKTYDEIVTHDDEWYAQNKVATRFGEAVTKIDRARKVVVTKAGETAYDKLLIATGSMPFILPLPGKDLEGVIAFRDIDDVERMLDTAALPQAKAVVIGGGLLGLEAAAGLRLRGMEVVVLHVMGHLMERQLDPSAGYLLQKDLERRGIKVHCKAQTRAILGSNRVEAVALEDGTVYGADIVVMAVGIRPETRLATDAHLEVNRGIVVDAGMRTSDPDILSIGECVEFGGAVWGLVAPLYDQAKVVAQTLLGEAAVFVPQELSTKLKVTGCDLFSAGDFADAPDREEIVFRDASRGVYKRLVLKDDVLLGAVMYGDTADGAWFFSKIKGKEDVSQGRDTLIFGPAYAGGAALDPMAAVAALPDDAEICGCNGVCKGKIVTAITTGGLTTLDEVRAGTKASSSCGQCTGLVEQVLAVTLGDVFVLPSAKPMCKCTDLTHEDVRRLIKAKALKSMPAVWQELGWKTSCGCPSCRPALNFYLLADWPDDYVDDAQSRFINERAHANIQKDGTFSVMPRMWGGVTTAEELRAIADAADKFDVPMVKVTGGQRIDLLGVKKEDLPAIWADLNAAGMVSGHAYTKGLRTVKTCVGTDFCRFGTQDSTGLGIRLEKRLWGSWTPHKVKLAVSGCPRNCAEATCKDVGVVCTDAGYNIGVGGAAGLDLKATEPLTTAKTEDEAVEITVAFTQLYRENAKYLDRPYKWIEKVGLDWVKAQVVDDLENRAALVARFDHSQTIYQRDPWADRTQGEGTREFTPLADFTLRAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV5</accession>
    <name>A0A2M9PGV5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)</fullName>
            <ecNumber evidence="4">5.4.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="ORF">CNY89_00575</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate</text>
            <dbReference type="Rhea" id="RHEA:23536"/>
            <dbReference type="ChEBI" id="CHEBI:58225"/>
            <dbReference type="ChEBI" id="CHEBI:58601"/>
            <dbReference type="EC" id="5.4.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.4.2.2" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000017">
        <property type="protein sequence ID" value="PJN96777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004614">
        <property type="term" value="F:phosphoglucomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005846">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005843">
        <property type="entry name" value="A-D-PHexomutase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036900">
        <property type="entry name" value="A-D-PHexomutase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016066">
        <property type="entry name" value="A-D-PHexomutase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045244">
        <property type="entry name" value="PGM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22573">
        <property type="entry name" value="PTHR22573"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02880">
        <property type="entry name" value="PGM_PMM_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00408">
        <property type="entry name" value="PGM_PMM_IV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55957">
        <property type="entry name" value="SSF55957"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00710">
        <property type="entry name" value="PGM_PMM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7 9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="12">
        <location>
            <begin position="13"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="13">
        <location>
            <begin position="183"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_III" evidence="14">
        <location>
            <begin position="293"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_IV" evidence="11">
        <location>
            <begin position="455"/>
            <end position="516"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000443"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF02880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="542" mass="58019" checksum="CE96419EBEC29361" modified="2018-04-25" version="1">MIKTVPTKPYADQKPGTSGLRKKVPHFQQPNYVENFVQAIFDSLEGFEGKTLVIGGDGRYFNREVIQIALKMAAAAGFGRVLVGRGGILSTPAASHVIRRNHAFGGIILSASHNPGGPTEDFGIKYNIGNGGPAPERITEAIYARTKELDEYRIVEAPDLDLDKVGTQTLDRMTVEVIDPVADYAALMETLFDFPAIRAMFADGFRMSFDAMSAVTGPYAQEILETRLGAPVGTVKNAVPLPDFGGHHPDPNLVHAKELYDLMMSEDAPDFGAASDGDGDRNLVIGKGIFITPSDSLALLAANAHLAPGYASGLKGIARSMPTSGAADRVAEKLGVGLYETPTGWKFFGNLLDAELATICGEESAGTGSNHVREKDGLWAVLLWLNILAARKEPAKDIVAKHWAEYGRNYYARHDYEGIDSAAADGLMAALRDKLATLPGTKVGPLTVETADDFAYLDPVDGSESRKQGVRILFEGGSRVVFRLSGTGTSGATLRVYIERFEPDPAGHDLPTAEALADLIAAAESLASIKERTGRSEPDVIT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY9</accession>
    <name>A0A2M9PGY9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Urea ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">urtA</name>
        <name evidence="2" type="ORF">CNY89_00755</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000023">
        <property type="protein sequence ID" value="PJN96744.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06355">
        <property type="entry name" value="PBP1_FmdD-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017777">
        <property type="entry name" value="ABC_urea-bd_UrtA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03407">
        <property type="entry name" value="urea_ABC_UrtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014922513" evidence="1">
        <location>
            <begin position="25"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96744.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="428" mass="46147" checksum="5408B56E46100D7C" modified="2018-04-25" version="1">MIGKFNGLMLGAALGALLAAPALAQDDTIKVGVLHSLSGTMAISETTLKDAVLMMIEEQNAKGGVLGKQLEAVVVDPASDWPRFAELARELIAGQGVDVVFGCWTSVSRKSVLPVFEELNSILFYPVQYEGQESQRNVFYTGAAPNQQAIPAVDYLMNDEGVERWVLAGTDYVYPRTTNQILEAYLKAKGVAAEDIMINYTPFGHSDWQTIVSDIKGFGSAGKKTAVVSTINGDANVPFYKELGNQGVSAEDIPVIAFSVGEEELAGLDTAPLVGHLAAWNYFMSVDTRENAEFIEKWQTFIGSEDRVTNDPMEATYIGFNMWVKAVEAAGTTDTDAVIEAMNGVAVPNLTGGISSMSVNHHITKPVLIGEIRDDGQLDVVWETPGLVLGDEWSDYLPESKDLVGVWREPMQCGNFNTATGQCGGATN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ0</accession>
    <name>A0A2M9PGZ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00435</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000012">
        <property type="protein sequence ID" value="PJN96806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1510.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002524">
        <property type="entry name" value="Cation_efflux"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027469">
        <property type="entry name" value="Cation_efflux_TMD_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01545">
        <property type="entry name" value="Cation_efflux"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161111">
        <property type="entry name" value="SSF161111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01297">
        <property type="entry name" value="CDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="41"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="73"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="113"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="19450" checksum="49A6E8D213ED63DD" modified="2018-04-25" version="1">MDIKLKVAAGSILVGVAVLGIKYFAYAVTGSIALYSDAMESLVNVATAVAALFAVRLSMAPADDNHPYGHHKVEYFSAVLAGSLIIVAALLIVREAWAGIQNPTPIAAPAEGLLLSGVASLLNAGWSWVLIRQGRKHRSPALVADGRHLLSDVVTSVGVAIGILLSVVPPSGGRRRRGSSPPRPRCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH18</accession>
    <name>A0A2M9PH18_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000004">
        <property type="protein sequence ID" value="PJN96849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7851" checksum="7D8CE467F82BD01D" modified="2018-04-25" version="1">MRSDIEEVDVIFQHQTDRAVCVREDEDGDDIWLPLSQIEIEAKNTPELRRGCVAVVSGPEWLLTDKGLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH51</accession>
    <name>A0A2M9PH51_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00085</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000002">
        <property type="protein sequence ID" value="PJN96870.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="107"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96870.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="179" mass="19326" checksum="50E1FDFD17B4011F" modified="2018-04-25" version="1">MSDISQSAAGRDRRSILRNEAPYLIILLLAAGGAGYFSMTRQPIVHYWDALALIIAAVSILTGWARYPDKARRWRLIWTQVLHWGAFLVAMNLVFLPSIQANLNADATSLVVLFLLALGAFTSGVHTDSPLLCANGALMALAVPAIAWLNQSALLITLILAVIVAGAAAVVWLRYKSAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH60</accession>
    <name>A0A2M9PH60_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96876.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025267">
        <property type="entry name" value="DUF4043"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13252">
        <property type="entry name" value="DUF4043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96876.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="392" mass="42895" checksum="3E97281FD0D9206C" modified="2018-04-25" version="1">MAITQLPIGQRITRWDSDFLSEYVRASRFKQYMGRAVAGPGEGQDANSEAVIQVRSDLETMAGKTVNIPLITRLKGAGVQGYTRLTGNEEGLAIYNDQVTVHYNRNGVEIAEADESWTEMDLRRAGKMRLKVWAAECLRDDLIIALADIYNRSYISGRNADTASGTRHTPTSFMAALNADQSGMDAWLLANRDRILYGPDLAHMEADSDHSDSVVKLTASTDKASATVLKLAKGLAKTAGSANDEGIHIRPASYNDEKGRENYVWFVPTSDFNNLAEDADIKQANLEGRVRGVEDHPIFQDGDLLYKGVVIREVPEIPAFGNVGASSATVNMSFFCGASAAAVTWGKKPTTRSKKDDYDFFTGLAIMESRGTKKTFYNGQQYGVVTVFTTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G9</accession>
    <name>A0A2M9P4G9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29885</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004599">
        <property type="protein sequence ID" value="PJN92419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8469" checksum="E5287EB3B6AFB5DF" modified="2018-04-25" version="1" fragment="single">WLDSWTFDTDAETEQPRGMTLTLSDWVYEGIVNEKSLLTMHPDYFLLSGGLERALYRIARKHAGTQYGGWLCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N4</accession>
    <name>A0A2M9P4N4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transketolase</fullName>
            <ecNumber evidence="1">2.2.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29255</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.2.1.1" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01004354">
        <property type="protein sequence ID" value="PJN92490.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004802">
        <property type="term" value="F:transketolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92490.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8632" checksum="AEBCC36C6D7AD249" modified="2018-04-25" version="1" fragment="single">TAIGARGASERAAWEERFAKLSGAKQAEFERIMAGTPPKKLVPALTAYRKTLSETKPKVATRKASEMVLEVVNEVMPET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P504</accession>
    <name>A0A2M9P504_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003987">
        <property type="protein sequence ID" value="PJN92609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="10073" checksum="4D67C33754F0B14E" modified="2018-04-25" version="1" fragment="single">VIAMDISGFFDCLDHMLLRNEVAGLLGVTRLEKHHATVWKNVTRYSWVETVDLDELLGRKRNGRGRVCSPADFAEHVRSRKDGLVRTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P516</accession>
    <name>A0A2M9P516_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_18670</name>
        <name evidence="7" type="ORF">CNY89_19485</name>
        <name evidence="6" type="ORF">CNY89_20365</name>
        <name evidence="5" type="ORF">CNY89_20470</name>
        <name evidence="4" type="ORF">CNY89_20485</name>
        <name evidence="3" type="ORF">CNY89_20495</name>
        <name evidence="2" type="ORF">CNY89_21980</name>
        <name evidence="1" type="ORF">CNY89_28185</name>
    </gene>
    <organism evidence="1 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003981">
        <property type="protein sequence ID" value="PJN92613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002167">
        <property type="protein sequence ID" value="PJN93289.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001837">
        <property type="protein sequence ID" value="PJN93484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001835">
        <property type="protein sequence ID" value="PJN93486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001833">
        <property type="protein sequence ID" value="PJN93487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001812">
        <property type="protein sequence ID" value="PJN93497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001629">
        <property type="protein sequence ID" value="PJN93625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001494">
        <property type="protein sequence ID" value="PJN93745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93289.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6469" checksum="9F2ECC60B432F78F" modified="2018-04-25" version="1" fragment="single">MSIATIGIDLGKNSCSLAGLDGTGAVVLRRRFTRERLVAFLAGQPACVVAMEACCGAHYLGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P550</accession>
    <name>A0A2M9P550_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Electron transfer flavoprotein-ubiquinone oxidoreductase</fullName>
            <shortName evidence="5">ETF-QO</shortName>
            <ecNumber evidence="5">1.5.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_27910</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Accepts electrons from ETF and reduces ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H(+) + oxidized [electron-transfer flavoprotein]</text>
            <dbReference type="Rhea" id="RHEA:24052"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="1.5.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="5">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.1" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01003882">
        <property type="protein sequence ID" value="PJN92643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004174">
        <property type="term" value="F:electron-transferring-flavoprotein dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040156">
        <property type="entry name" value="ETF-QO"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10617">
        <property type="entry name" value="PTHR10617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0249">Electron transport</keyword>
    <keyword evidence="3 5" id="KW-0274">FAD</keyword>
    <keyword evidence="2 5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 5" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <keyword evidence="5 6" id="KW-0830">Ubiquinone</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU366068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10406" checksum="17410F7D4E9E7AEE" modified="2018-04-25" version="1" fragment="single">FDRLTNVAFAFTNHAEDQPCHLVLKEQDLPIAVNLPRYAEPAQRYCPAGVYEVVRGENGCDPRFIINFQNCVHCKTCDIKDPLQNIDWTTP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A0</accession>
    <name>A0A2M9P5A0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003753">
        <property type="protein sequence ID" value="PJN92688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7359" checksum="F6653D5E2B3048E0" modified="2018-04-25" version="1" fragment="single">PDYEIALTETVDKSPAVLFRLRGEEEALALAKKMRAEEERRARFVLDCQRADEVDASMDQLAGPH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5C9</accession>
    <name>A0A2M9P5C9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003665">
        <property type="protein sequence ID" value="PJN92725.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92725.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11209" checksum="D565B2BEE0748D8D" modified="2018-04-25" version="1" fragment="single">RAYTLDEVMKLKEEEWFSRGVALASLCNRHIVDTSLERLEQLRQTGTQHQLIAVACSINHARQISSLYRERGFTAEVIHSKQREDEQATILAALRNGT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K1</accession>
    <name>A0A2M9P5K1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_26190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003352">
        <property type="protein sequence ID" value="PJN92826.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="81"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="81"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92826.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="12521" checksum="BB667C00AD8BA6B2" modified="2018-04-25" version="1" fragment="single">TNWIDYLISLSPVLQTAIWACVAILFAWVIKEPIRHLAERLVERVGQGDKIITPYFSIERQEQLNQLDYIQTVSRGEDASTIIRTENSEKSPTSSQEFEAYRQSIYDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q8</accession>
    <name>A0A2M9P5Q8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003217">
        <property type="protein sequence ID" value="PJN92872.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92872.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="27" mass="2950" checksum="9824453F5F64B6B8" modified="2018-04-25" version="1" fragment="single">AKTDGRLSAIHEKWLGSPLPEFVQAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5S2</accession>
    <name>A0A2M9P5S2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glutamine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">glnQ</name>
        <name evidence="2" type="ORF">CNY89_25765</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003217">
        <property type="protein sequence ID" value="PJN92873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="14"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6911" checksum="0ABC9E9439431D78" modified="2018-04-25" version="1" fragment="single">MQGINKWYGAYHALRNVNLTVRRGEKIVICGPSGSGKSTLIRTINQLEAIQEGRIVVDGVDLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T2</accession>
    <name>A0A2M9P5T2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003187">
        <property type="protein sequence ID" value="PJN92883.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92883.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7488" checksum="D6B2C8D7A46D33A8" modified="2018-04-25" version="1" fragment="single">MLPETLILCPAPGSEAMRLALEAARRVYDESGLSEEEREQDMRLQRQFLAFVRGEMPDFAHAPGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V1</accession>
    <name>A0A2M9P5V1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003079">
        <property type="protein sequence ID" value="PJN92931.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004731">
        <property type="term" value="F:purine-nucleoside phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009116">
        <property type="term" value="P:nucleoside metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1580">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035994">
        <property type="entry name" value="Nucleoside_phosphorylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011268">
        <property type="entry name" value="Purine_phosphorylase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11904">
        <property type="entry name" value="PTHR11904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53167">
        <property type="entry name" value="SSF53167"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92931.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="7952" checksum="3C649D3838D5C02A" modified="2018-04-25" version="1">MTEFGDRVEAAFASIETRAGDPVEIGLVLGSGLGGIADRIEAPVEIPYAEIAGMARSTAPGHAGRLVLGRLFGRASR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P666</accession>
    <name>A0A2M9P666_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS66 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24090</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002726">
        <property type="protein sequence ID" value="PJN93064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004291">
        <property type="entry name" value="Transposase_IS66_central"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03050">
        <property type="entry name" value="DDE_Tnp_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DDE_Tnp_IS66" evidence="1">
        <location>
            <begin position="3"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14356" checksum="441BBF8C81D2C07C" modified="2018-04-25" version="1" fragment="single">ETMIRHIAGLYAVEKAVRGHSPDARLAARRQLSAPIVAAMKPWLEKQLSQLSSGSKLAEHIRYTLGAWGGLIHFLDDGRLELDTNSIENLIRPVALTRKNSLFAGHEIGAEHWALLASLVATCKLNGVEPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P699</accession>
    <name>A0A2M9P699_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_24340</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002794">
        <property type="protein sequence ID" value="PJN93038.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93038.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9784" checksum="46A4CA14F453A054" modified="2018-04-25" version="1" fragment="single">VIPFFAFSPEIRRVIYTTNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6B0</accession>
    <name>A0A2M9P6B0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002752">
        <property type="protein sequence ID" value="PJN93050.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004660">
        <property type="entry name" value="PDH_E1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041621">
        <property type="entry name" value="PDH_E1_M"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43825:SF3">
        <property type="entry name" value="PTHR43825:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17831">
        <property type="entry name" value="PDH_E1_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PDH_E1_M" evidence="1">
        <location>
            <begin position="15"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="130"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93050.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="13855" checksum="5140094696848DD2" modified="2018-04-25" version="1" fragment="single">RVRRTPPGPAVPPRETFAAFATDAQGKTMSTTVAAVRMLGGLLKHKDFGARIVPIVADEARTFGMDGLFRQIGIYAPQGQLYEPQDAGSMLFYKEARNGQLLEEGITEAGAISSWTAAATAYSVHGAPCL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F3</accession>
    <name>A0A2M9P6F3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23280</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002496">
        <property type="protein sequence ID" value="PJN93141.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014819032" evidence="2">
        <location>
            <begin position="21"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93141.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="8617" checksum="176688E0E1EBD68C" modified="2018-04-25" version="1" fragment="single">AKTILAAAVAATAFSTPLLAQDAEFQLPEQCTTAAAAGGMDHSAMGHGGMQDDQPGGMDSGMMGMMGMGGMDLESIPEHVQETCAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H0</accession>
    <name>A0A2M9P6H0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002487">
        <property type="protein sequence ID" value="PJN93146.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93146.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="16185" checksum="2103A3AA7DE462C2" modified="2018-04-25" version="1" fragment="single">DGAVFSIALMIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFSKILDVPPGVQTAAVRFGFMRTQLSFETFSCFMALFASWDFQMFFYIYSDRFPLNYLFAAFIAFMTALAISTSSLLTMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I6</accession>
    <name>A0A2M9P6I6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002544">
        <property type="protein sequence ID" value="PJN93125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8392" checksum="91B26BB03E85A237" modified="2018-04-25" version="1" fragment="single">MRVIHAAADSLTPSQHHAQTPPSALPERPDRQPVGDDRANDPGRTSGGRPRKADKREIVEAILYFLRAGCAWRLLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N3</accession>
    <name>A0A2M9P6N3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002435">
        <property type="protein sequence ID" value="PJN93168.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93168.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="15897" checksum="36B3AB401ED39665" modified="2018-04-25" version="1" fragment="single">HARSQSDLLNHFKKDFDNQILYTTHSPFMVPTHALETIRTVSIAEDKGTTVTNDPTGDARTLFPIQAALGYDLAQSLFIGPNNLVVEGVTDYWIFVIRLCYLAELGQPSLDEKLTLTPAGGAQKVSYMVALLTSEQLNVLVLMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P709</accession>
    <name>A0A2M9P709_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002149">
        <property type="protein sequence ID" value="PJN93300.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023883">
        <property type="entry name" value="CHP03980_redox-disulphide"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038062">
        <property type="entry name" value="ScdA-like_N_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140683">
        <property type="entry name" value="SSF140683"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03980">
        <property type="entry name" value="prismane_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93300.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9489" checksum="A095D2D68EDB12EA" modified="2018-04-25" version="1">MTPDIDAPDLPLAVLFQTWPETIRVFRAYRTGCVGCPIAPFHTVLDTCAEYRLDVVAFRAALRAAVATDCLPPSAVTEGRPAGDRPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P750</accession>
    <name>A0A2M9P750_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002080">
        <property type="protein sequence ID" value="PJN93335.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="144"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93335.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="16786" checksum="07D6BEE3F4993E3D" modified="2018-04-25" version="1" fragment="single">MHDWCPTFRGGERVLARICRQFPRAEVFTLFDFLPPEVKEEYFAGVAFHTSPADRLPLIRRYYRALFFLCPFLIEQFDVTGFDAVISSSAAFARGIITRPDQPHLCYVHSPVRYAWDEQFSYFQMGRIGFGPKGLAYRAMLHHL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P786</accession>
    <name>A0A2M9P786_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">C4-dicarboxylate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_20885</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001921">
        <property type="protein sequence ID" value="PJN93426.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93426.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9888" checksum="7F642BAF3079288D" modified="2018-04-25" version="1" fragment="single">GKARLDIFGGLVFLLPMCLIMIGFTLPWALESWRSGEVGASAGGLPRWPGKMLLPIGFALLTLQAVAELIKCVAALTTDYTREHGYEKPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D1</accession>
    <name>A0A2M9P7D1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001866">
        <property type="protein sequence ID" value="PJN93461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="11008" checksum="0FDF7CFDD5930FA9" modified="2018-04-25" version="1">MGDATSEANRPPHVASERRDLERMSFIQRAIIAPLRRRLRRHKQIVQLECLSDHLLDDIGLSRAAITRAVDAMIAGDRRRTPVPSLGAFRDQLRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7H2</accession>
    <name>A0A2M9P7H2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20345</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001807">
        <property type="protein sequence ID" value="PJN93501.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="115"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93501.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12566" checksum="B8CFB261B85B9C6F" modified="2018-04-25" version="1" fragment="single">MRRLTALLGDILTFARAARGDHQVPATPAAPDPDPAFAAPILAEVRAFGTEYDALLRPCCRRFTDALYEPVLQCETRMHEHALRGQRLSNELVALVPDLVRAALRAHPLTVAQAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I6</accession>
    <name>A0A2M9P7I6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20525</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001845">
        <property type="protein sequence ID" value="PJN93478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="14238" checksum="DAA4DC0502DA81A1" modified="2018-04-25" version="1" fragment="single">MLVVETIAKIRRAYFVQKKAIKEICRELNISRKVVRRVLRSGATEFVYERKVQPQPKIGPWRDELDRLLATNAARASRERLTLIRIFEELRGLGYAGGYDAVRRYAASWRRERSAATAATFVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7M4</accession>
    <name>A0A2M9P7M4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19995</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001736">
        <property type="protein sequence ID" value="PJN93551.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93551.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8768" checksum="CD63000EF67E4EA7" modified="2018-04-25" version="1" fragment="single">GTEFTSSAVLAFTQAAGLDWRYIAPGKPTQNAFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPIQRSAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q8</accession>
    <name>A0A2M9P7Q8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glucans biosynthesis glucosyltransferase MdoH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19695</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001674">
        <property type="protein sequence ID" value="PJN93594.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="58"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="132"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93594.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="19467" checksum="99BB45C4E8095476" modified="2018-04-25" version="1" fragment="single">WLRRAGWGVELDPDSVGSAEGGPETVMEFHKRDRRWSQGNMQHLRLIRGKGLSPVSRLHFACGIMGYLASPLWLGLVIAAIFFGVSEGMLIPTLGAIGLVLLQKSLGVVDWLIRRPTLRTWRIVLRTAARELFLSTLIAPMVMMRQTVSVISIFAGNDCGWKPAGGARKRGDMRW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R7</accession>
    <name>A0A2M9P7R7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19840</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001704">
        <property type="protein sequence ID" value="PJN93573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7169" checksum="5048C930D6AF5F25" modified="2018-04-25" version="1" fragment="single">MIDLQKFFDAVRANPFGGKLLPGQVQGCEAILRASDRHGVTDERHVANILAQVHHETDGTMMPEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z6</accession>
    <name>A0A2M9P7Z6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cu(I)-responsive transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">cueR</name>
        <name evidence="5" type="ORF">CNY89_19300</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001594">
        <property type="protein sequence ID" value="PJN93655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045893">
        <property type="term" value="P:positive regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01108">
        <property type="entry name" value="HTH_CueR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011789">
        <property type="entry name" value="CueR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009061">
        <property type="entry name" value="DNA-bd_dom_put_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000551">
        <property type="entry name" value="MerR-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015358">
        <property type="entry name" value="Tscrpt_reg_MerR_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00376">
        <property type="entry name" value="MerR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09278">
        <property type="entry name" value="MerR-DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00040">
        <property type="entry name" value="HTHMERR"/>
    </dbReference>
    <dbReference type="SMART" id="SM00422">
        <property type="entry name" value="HTH_MERR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46955">
        <property type="entry name" value="SSF46955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02044">
        <property type="entry name" value="CueR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50937">
        <property type="entry name" value="HTH_MERR_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH merR-type" evidence="4">
        <location>
            <begin position="1"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50937"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="14166" checksum="639A0266EED26CA7" modified="2018-04-25" version="1" fragment="single">MNIGTAARQSGLPPKTIRYYEDIGLLTADRAANGYRDYSNEDVHRLRFVQRSRSLGFSVEECRQLLSLYTDRDRASADVKAIATEKLGEIDRKIAELTGLREMLGHLVENCHGDARPDCPIIDGLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P842</accession>
    <name>A0A2M9P842_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18925</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001529">
        <property type="protein sequence ID" value="PJN93712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="161"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="21989" checksum="EDC022DCB8EDA05E" modified="2018-04-25" version="1" fragment="single">MLIRAGFEISMQVAPDTPLVLALSPHPDAPQPILGSGEVHPTPYHEVSTHRDVFGNHLSRITAQGGLMTLVSDFIVSHDGSPDRIVPDARQHPVGELPGEVLPFLTPSRFCESDLLADEAWSRFGHVEGGWARVQAVCDFVHGHIRFGYGYGRATKTALEAFREGNGVCRDYAHLAVAMCRALNIPARYASGYLGDIGIAPLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P863</accession>
    <name>A0A2M9P863_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">2-hydroxychromene-2-carboxylate isomerase</fullName>
            <ecNumber evidence="1">5.99.1.4</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_18765</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>2-hydroxychromene-2-carboxylate = (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoate</text>
            <dbReference type="Rhea" id="RHEA:27401"/>
            <dbReference type="ChEBI" id="CHEBI:59350"/>
            <dbReference type="ChEBI" id="CHEBI:59353"/>
            <dbReference type="EC" id="5.99.1.4"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the GST superfamily. NadH family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.99.1.4" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01001504">
        <property type="protein sequence ID" value="PJN93734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018845">
        <property type="term" value="F:2-hydroxychromene-2-carboxylate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901170">
        <property type="term" value="P:naphthalene catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03022">
        <property type="entry name" value="DsbA_HCCA_Iso"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001853">
        <property type="entry name" value="DSBA-like_thioredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014440">
        <property type="entry name" value="HCCAis_GSTk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044087">
        <property type="entry name" value="NahD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01323">
        <property type="entry name" value="DSBA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006386">
        <property type="entry name" value="HCCAis_GSTk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4" id="KW-0413">Isomerase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DSBA" evidence="3">
        <location>
            <begin position="4"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="2">
        <location>
            <position position="12"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRNR" id="PIRNR006386"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR006386-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="197" mass="21505" checksum="CF726085F01031C9" modified="2018-04-25" version="1">MAEIDYYLSPLSPYCYLAGQKLEAIAAAQGARIVYKPFQIARIFEAVGTPAVKDRHPARKQYRLRDLARTARFEGLPINLQPAFWPTNPAAASAAIITAQRIGGGDLGGLVHGFLKAVWAEDRDIAEAAVVKDVLNAHGFDPILADKGLLAAMETLDRNTDEALARGVFGAPTYAIGEDLFWGQDRLPHLERHLAEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P870</accession>
    <name>A0A2M9P870_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18655</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001491">
        <property type="protein sequence ID" value="PJN93747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="25913" checksum="21509C4035040208" modified="2018-04-25" version="1" fragment="single">LRRRTRGPVEVEAVSRPIWVSRRSPWGGAAQSSRTLSTTAAFAEPSTVQILNDFDQMVMSSICTTPESAPVVLTLPPDLRKRWEQAGAQGEGVRKINGGQIEVAPGGKLDGFALRPGEVFQVQASTRDGVAELSQMGAPGDPGLIVLRTQVEAPGATATADFTEPRPRENPHFIRPGTTLSVSAADFGDVSKVKSMKLFVDGREVASRKGPPFDFQWKGQKLGGHDLQLEATDRTGAVKRI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P897</accession>
    <name>A0A2M9P897_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">AAA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001498">
        <property type="protein sequence ID" value="PJN93738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="52"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="197" mass="21590" checksum="46CF977DAD693AD8" modified="2018-04-25" version="1" fragment="single">AELSEKQARSIKYQIAIAKLPLAKEIDEFAFEGTPINETLVRDLAGGGFLAQQRNLVLIGGTGTGKTHLAVGIARACIRGGARGRFFNVVDLVNKLEAEARAGRQGRLADHLCRMDLVVLDELGYLPFAQAGGQLLFHLVSRLYEQTSVVVTTNLAFGEWPAVFGDPKMTTALLDRLTHHCDIVETGNESWRFKNRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D4</accession>
    <name>A0A2M9P8D4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">ADH_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18260</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001429">
        <property type="protein sequence ID" value="PJN93812.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013154">
        <property type="entry name" value="ADH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002328">
        <property type="entry name" value="ADH_Zn_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08240">
        <property type="entry name" value="ADH_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00059">
        <property type="entry name" value="ADH_ZINC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_N" evidence="2">
        <location>
            <begin position="26"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08240"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93812.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13646" checksum="48A28169BEA07487" modified="2018-04-25" version="1" fragment="single">MKAMIFERFGEAPDIRAVPDPAPAPDGVVIEVRATGLCRSDWHGWMGHDTDIRLPHVPGHEFAGVVSAVGRDVRRFRVGERVTVPFIAACGAVTELADFLHKQDGSDWLVHPAYLINQDNKKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E3</accession>
    <name>A0A2M9P8E3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18340</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001444">
        <property type="protein sequence ID" value="PJN93799.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93799.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="17922" checksum="81A1F3D51AAE12E8" modified="2018-04-25" version="1" fragment="single">MARKASPIGPHVLALIEDARVDLARAALAVREGDNEPEFKLPEDVPDLADEEAVEAFRQALVETLSDFDRDDLRPAEQRSRRIRALAEKKGVTSLTTIVEQQLDETRSQEFHRQPDELCRSIWAYLHERETFEDAESFHFARQFRDHGKLYDAFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q2</accession>
    <name>A0A2M9P8Q2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Histidine kinase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_17620</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001349">
        <property type="protein sequence ID" value="PJN93913.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005467">
        <property type="entry name" value="His_kinase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50109">
        <property type="entry name" value="HIS_KIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Histidine kinase" evidence="2">
        <location>
            <begin position="97"/>
            <end position="255"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="258"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="258"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="274"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50109"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93913.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="30525" checksum="6EBB6FEC2BD91934" modified="2018-04-25" version="1" fragment="single">ILRLAGDRSLRLRGVAMTRGEDTWLMLGHIPDLDNTDPLIALQFSDFSPTDGTLDMLLAAEMRSGLLAEARALAEALQEQKKAAERANSAKSAFLATMSHEIRTPMNGVLGLAALLAETDLSPQQREMLDVMIASGRLLMDILNDVLDLSKIEAGEIELEQTVFDADALARGVGTLFAPAAAAKKIALEVSVDAPAPWRLGDPVRIRQILVNLVSNAIKFTDSGQVSVAVALRPDSAGGPDLLHMVVRDSGIGMSAASARSWSTSSPMRSSSPIPARSPSPSPCAPIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P916</accession>
    <name>A0A2M9P916_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">50S ribosomal protein L14</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16915</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the universal ribosomal protein uL14 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001254">
        <property type="protein sequence ID" value="PJN94034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_L14_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_L14P"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11761">
        <property type="entry name" value="PTHR11761"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01374">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="SSF50193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3 4" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU003949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5410" checksum="CDA5C11DD441CF56" modified="2018-04-25" version="1" fragment="single">MIQMQTNLDVADNSGARRVQCIKVLGGSHRRYASVGDIIVVSVKEAIPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P935</accession>
    <name>A0A2M9P935_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase S45 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001247">
        <property type="protein sequence ID" value="PJN94041.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017000">
        <property type="term" value="P:antibiotic biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.439.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023343">
        <property type="entry name" value="Penicillin_amidase_dom1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002692">
        <property type="entry name" value="S45"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34218">
        <property type="entry name" value="PTHR34218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01804">
        <property type="entry name" value="Penicil_amidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006586"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94041.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17564" checksum="66CCE1AA6F60214E" modified="2018-04-25" version="1">MATLFRWLMRLVVGFVLLGLLAAGLAWYLAARSLPDYDRTFTLEGPQAPIEILRDRNAIPHILATDDADAFFGLGFVHAQDRLWQMTLMRRTAQGRLSELFGPETLEIDRTMRALDLYTLAQAGVAWQTPETRAALEAYSAGVNAWLGVAKRLWPCG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P938</accession>
    <name>A0A2M9P938_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">3-deoxy-manno-octulosonate cytidylyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16860</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001248">
        <property type="protein sequence ID" value="PJN94040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016779">
        <property type="term" value="F:nucleotidyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003329">
        <property type="entry name" value="Cytidylyl_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02348">
        <property type="entry name" value="CTP_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="197" mass="21706" checksum="7EBE798308A52F83" modified="2018-04-25" version="1">MNLSRRETRLNGTERCAAVSRALGPVYDVIVNLQGDAPLTPPWFLEALIEAIDADPDCGVATPVLRCDQQALDGFLEDRRAGRVGGTTAVFDAAGRGLYFSKEVIPYTGRGMKPGESIPVFHHVGAYAYRRNALLDYVDWRTGPLETWEGLEQLRFLENGAVVRCVEVQARGRVFWELNNPGDVPRIEAALASQGMD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P944</accession>
    <name>A0A2M9P944_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-L-isoaspartate O-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.77</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="2">L-isoaspartyl protein carboxyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Protein L-isoaspartyl methyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="2">Protein-beta-aspartate methyltransferase</fullName>
            <shortName evidence="2">PIMT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="2" type="primary">pcm</name>
        <name evidence="3" type="ORF">CNY89_16925</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>[protein]-L-isoaspartate + S-adenosyl-L-methionine = [protein]-L-isoaspartate alpha-methyl ester + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:12705"/>
            <dbReference type="Rhea" id="RHEA-COMP:12143"/>
            <dbReference type="Rhea" id="RHEA-COMP:12144"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90596"/>
            <dbReference type="ChEBI" id="CHEBI:90598"/>
            <dbReference type="EC" id="2.1.1.77"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the methyltransferase superfamily. L-isoaspartyl/D-aspartyl protein methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.77" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001256">
        <property type="protein sequence ID" value="PJN94029.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004719">
        <property type="term" value="F:protein-L-isoaspartate (D-aspartate) O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00090">
        <property type="entry name" value="PIMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000682">
        <property type="entry name" value="PCMT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11579">
        <property type="entry name" value="PTHR11579"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00080">
        <property type="entry name" value="pimt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01279">
        <property type="entry name" value="PCMT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005369"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00090"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94029.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22887" checksum="BCB91AE859FAC396" modified="2018-04-25" version="1">MQFVFALRSHGVTNPDVLRAMESIRRSEFLEGIFRERAYEDTPLPIACGQTISQPSVVGLMTQALEVTRRCKVLEIGTGSGYQAAVLAKLARRVYTVERHRRLALTARALFERQEIGNITVILGDGSLGLPEQAPFDRILVTAAAEDPPRTLLNQLRPGGIMVLPVGQSHAVQTLIRIDKTETGLDYTDLGPVRFVPLLEGLAQDVLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K8</accession>
    <name>A0A2M9P9K8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15790</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001116">
        <property type="protein sequence ID" value="PJN94223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14605" checksum="2857EC872C50157E" modified="2018-04-25" version="1">MGTELRRLKPETINRALLNLRAYIIRDGGEGLRHVNALLRLQGCALEPVPKKAQRHFRRGELRRAIRAELRKGPLTAWQLAERIAPMREGLSIQRAHATVHRALTPMRARGVVRNDGGVWSLEKGDAGHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9M1</accession>
    <name>A0A2M9P9M1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">OmpA-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15745</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001110">
        <property type="protein sequence ID" value="PJN94230.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07185">
        <property type="entry name" value="OmpA_C-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1330.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006665">
        <property type="entry name" value="OmpA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036737">
        <property type="entry name" value="OmpA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00691">
        <property type="entry name" value="OmpA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103088">
        <property type="entry name" value="SSF103088"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51123">
        <property type="entry name" value="OMPA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpA-like" evidence="2">
        <location>
            <begin position="1"/>
            <end position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00473"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94230.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16602" checksum="77F027AE6C135D0C" modified="2018-04-25" version="1">MDRRAIVDIIAERLEQILPCYSLGSRARWSDKCNSGLAVIEALQIEGHTDADGSAFNNMVLSTARANSTFAAMTDREPGLIDHLNFRNQPVISVAGYGEMRPVAPNDSPEDKATNRRMDLRIIMYVPRQTEEIERIREKLSAGLSGEQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N0</accession>
    <name>A0A2M9P9N0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">CbiA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001096">
        <property type="protein sequence ID" value="PJN94246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002586">
        <property type="entry name" value="CobQ/CobB/MinD/ParA_Nub-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01656">
        <property type="entry name" value="CbiA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CbiA" evidence="1">
        <location>
            <begin position="4"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01656"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="4866" checksum="3E1F1EFEA680E67A" modified="2018-04-25" version="1" fragment="single">MRTVLVANRKGGCGKTLTAVTLAAALAGRGGTVALADADPQKSAPALAET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T8</accession>
    <name>A0A2M9P9T8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15295</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the phosphohexose mutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001057">
        <property type="protein sequence ID" value="PJN94307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016868">
        <property type="term" value="F:intramolecular transferase activity, phosphotransferases"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005844">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016055">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-I/II/III"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005845">
        <property type="entry name" value="A-D-PHexomutase_a/b/a-II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016066">
        <property type="entry name" value="A-D-PHexomutase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005841">
        <property type="entry name" value="Alpha-D-phosphohexomutase_SF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02878">
        <property type="entry name" value="PGM_PMM_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02879">
        <property type="entry name" value="PGM_PMM_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00509">
        <property type="entry name" value="PGMPMM"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53738">
        <property type="entry name" value="SSF53738"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00710">
        <property type="entry name" value="PGM_PMM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PGM_PMM_I" evidence="4">
        <location>
            <begin position="3"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="PGM_PMM_II" evidence="5">
        <location>
            <begin position="157"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004326"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02878"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02879"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="264" mass="28037" checksum="787DF8C68A1BFBF5" modified="2018-04-25" version="1">MGRKLFGTDGVRGRANDAPMTPDMALRLGQAAGRFFTSGGHAHRVVIGKDTRRSGYMLESAMTSGFTSVGMDVFLVGPVPTPAVGFLTRSMRADLGVMISASHNPYQDNGIKFFGPDGFKLSDASEEEIEGLIDHPPALAEPKAIGRATRIDDVRGRYMEFAKTTFPRGLRLDGLKVVVDCANGAAYRTAPDILWELGAEVVKIGVEPNGFNINADCGSTHPERAAAAVREHGADLGISLDGDADRVMIIDETGAVADGDQVMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Y9</accession>
    <name>A0A2M9P9Y9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Fis family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001029">
        <property type="protein sequence ID" value="PJN94358.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94358.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5077" checksum="FAF3D42B64475092" modified="2018-04-25" version="1" fragment="single">TWSPRPAAPEGAATSAYFQIGDVAYVLVAETEGEKLVRAAADLARSLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL5</accession>
    <name>A0A2M9PAL5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Group 1 glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13685</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000895">
        <property type="protein sequence ID" value="PJN94578.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glycos_transf_1" evidence="1">
        <location>
            <begin position="12"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94578.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17617" checksum="712901E3514F762B" modified="2018-04-25" version="1" fragment="single">LLLHVLSDHRWSDRNWRLAFFGKGPMRHNVERLISMYGLEDRVTLGGFSDGVEALWADHHMLVQPSRHEGLPLTVVEAMMCGRPVLATDVAGHNEVIEDGVTGFLAESATVTSIGRALDCAWRRRGDLQAMGMAGARRIRSLMPHDAASVFADDVLRLC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP6</accession>
    <name>A0A2M9PAP6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000881">
        <property type="protein sequence ID" value="PJN94602.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="251"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94602.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="251" mass="26683" checksum="AF4C093DD7FD0101" modified="2018-04-25" version="1" fragment="single">MGFKTVLLVVGVDHPDAEVDRAAEIAEGLEGHLNVLVLGIAPPPPTSAYGVVSNDIWAAQYQDNQQIVEDRAGALRDRLAGRSAPVTVTSQFVDRASVSTLVARHARYADLTLILPEPEATEPIQSWVTTGALFESGRPVVLLPAGRSSFPAVRRAMIAWDASVEAAKAVRDAIGLMQRAERVTAVLIDPVPSFDGHGQEPGADLAVYLGRHGIEIEVLAVLIDPVPSFDGHGQEPGADLAVYLGRHGIEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE5</accession>
    <name>A0A2M9PBE5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Aldoketomutase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">Glyoxalase I</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="3">Ketone-aldehyde mutase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Methylglyoxalase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">S-D-lactoylglutathione methylglyoxal lyase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gloA</name>
        <name evidence="9" type="ORF">CNY89_11980</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(R)-S-lactoylglutathione = glutathione + methylglyoxal</text>
            <dbReference type="Rhea" id="RHEA:19069"/>
            <dbReference type="ChEBI" id="CHEBI:17158"/>
            <dbReference type="ChEBI" id="CHEBI:57474"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="EC" id="4.4.1.5"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Ni(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:49786"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000729">
        <property type="protein sequence ID" value="PJN94857.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004462">
        <property type="term" value="F:lactoylglutathione lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004360">
        <property type="entry name" value="Glyas_Fos-R_dOase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004361">
        <property type="entry name" value="Glyoxalase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037523">
        <property type="entry name" value="VOC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00903">
        <property type="entry name" value="Glyoxalase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00068">
        <property type="entry name" value="glyox_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51819">
        <property type="entry name" value="VOC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0456">Lyase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="VOC" evidence="8">
        <location>
            <begin position="2"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000817"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00030291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00030537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00030892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00032460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94857.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="15849" checksum="079C779B7FA75AF4" modified="2018-04-25" version="1">MKYLHTMVRVTDVEESLRFYCDLLGLKEIRRRDSEQGRFTLIFLAPEGQEEAQVELTHNWDPEEYSGGRNFGHLAYAVEDIYAICQRLQDGGVTINRPPRDGNMAFVKSPDGISVELLQMGDALEPQEPWASMPNTGSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR4</accession>
    <name>A0A2M9PBR4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">4-hydroxy-tetrahydrodipicolinate synthase</fullName>
            <shortName evidence="9">HTPA synthase</shortName>
            <ecNumber evidence="4 9">4.3.3.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">dapA</name>
        <name evidence="12" type="ORF">CNY89_11195</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 9">Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>L-aspartate 4-semialdehyde + pyruvate = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H(+) + H2O</text>
            <dbReference type="Rhea" id="RHEA:34171"/>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:67139"/>
            <dbReference type="ChEBI" id="CHEBI:537519"/>
            <dbReference type="EC" id="4.3.3.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer; dimer of dimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="9 10">Belongs to the DapA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Was originally thought to be a dihydrodipicolinate synthase (DHDPS), catalyzing the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to dihydrodipicolinate (DHDP). However, it was shown in E.coli that the product of the enzymatic reaction is not dihydrodipicolinate but in fact (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinic acid (HTPA), and that the consecutive dehydration reaction leading to DHDP is not spontaneous but catalyzed by DapB.</text>
    </comment>
    <dbReference type="EC" id="4.3.3.7" evidence="4 9"/>
    <dbReference type="EMBL" id="PHNO01000664">
        <property type="protein sequence ID" value="PJN94980.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00034">
        <property type="reaction ID" value="UER00017"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008840">
        <property type="term" value="F:4-hydroxy-tetrahydrodipicolinate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019877">
        <property type="term" value="P:diaminopimelate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009089">
        <property type="term" value="P:lysine biosynthetic process via diaminopimelate"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00950">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00418">
        <property type="entry name" value="DapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005263">
        <property type="entry name" value="DapA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002220">
        <property type="entry name" value="DapA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020625">
        <property type="entry name" value="Schiff_base-form_aldolases_AS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12128">
        <property type="entry name" value="PTHR12128"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00701">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001365">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00146">
        <property type="entry name" value="DHPICSNTHASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM01130">
        <property type="entry name" value="DHDPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00674">
        <property type="entry name" value="dapA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00666">
        <property type="entry name" value="DHDPS_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 9" id="KW-0220">Diaminopimelate biosynthesis</keyword>
    <keyword evidence="9 10" id="KW-0456">Lyase</keyword>
    <keyword evidence="7 9" id="KW-0457">Lysine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 9" id="KW-0704">Schiff base</keyword>
    <feature type="region of interest" description="Disordered" evidence="11">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="11">
        <location>
            <begin position="30"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor/acceptor" evidence="9">
        <location>
            <position position="171"/>
        </location>
    </feature>
    <feature type="active site" description="Schiff-base intermediate with substrate" evidence="9">
        <location>
            <position position="199"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="83"/>
        </location>
        <ligand>
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="241"/>
        </location>
        <ligand>
            <name>pyruvate</name>
            <dbReference type="ChEBI" id="CHEBI:15361"/>
        </ligand>
    </feature>
    <feature type="site" description="Part of a proton relay during catalysis" evidence="9">
        <location>
            <position position="82"/>
        </location>
    </feature>
    <feature type="site" description="Part of a proton relay during catalysis" evidence="9">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005120"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012086"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022915"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023154"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRNR" id="PIRNR001365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN94980.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="35743" checksum="C9E42EDB20F28C28" modified="2018-04-25" version="1">MIRSGGPDPVRSSARGRQRGLQDGRVASNRARHIAQESRHVQRFDHRARHPLRERKVDEKALVELVEWQIAEGTHGVVPVGTTGETPTLTHDEHEHVIEVVVATAAGRIPVIAGAGSNNTDEAIRLMRFAKKVGADAALVVTPYYNKPNQRGLIAHYTALHDAVDLPIVIYNIPGRSVIDMTPATMGELARLPRIVGVKDATGDVTRVSDQRAACGADFIQLSGEDASALGFNAHGGVGCISVVSNIAPRLCAEFQTATLNGDWTKALALQDRLLPLHRAAFAEPNPGPTKYALSLLGKCQEEMRLPLVPIEELTRERVRAALRHAGLLN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBW8</accession>
    <name>A0A2M9PBW8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Ketol-acid reductoisomerase (NADP(+))</fullName>
            <shortName evidence="9">KARI</shortName>
            <ecNumber evidence="9">1.1.1.86</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Acetohydroxy-acid isomeroreductase</fullName>
            <shortName evidence="9">AHIR</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Alpha-keto-beta-hydroxylacyl reductoisomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ilvC</name>
        <name evidence="13" type="ORF">CNY89_10900</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 9">Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(2R)-2,3-dihydroxy-3-methylbutanoate + NADP(+) = (2S)-2-acetolactate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:22068"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:49072"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="ChEBI" id="CHEBI:58476"/>
            <dbReference type="EC" id="1.1.1.86"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>(2R,3R)-2,3-dihydroxy-3-methylpentanoate + NADP(+) = (S)-2-ethyl-2-hydroxy-3-oxobutanoate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:13493"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:49256"/>
            <dbReference type="ChEBI" id="CHEBI:49258"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.86"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <text evidence="9">Binds 2 magnesium ions per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="3 9">Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 2/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4 9 10">Belongs to the ketol-acid reductoisomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.86" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000639">
        <property type="protein sequence ID" value="PJN95035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00047">
        <property type="reaction ID" value="UER00056"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00049">
        <property type="reaction ID" value="UER00060"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016853">
        <property type="term" value="F:isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004455">
        <property type="term" value="F:ketol-acid reductoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009097">
        <property type="term" value="P:isoleucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009099">
        <property type="term" value="P:valine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00435">
        <property type="entry name" value="IlvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008927">
        <property type="entry name" value="6-PGluconate_DH-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013023">
        <property type="entry name" value="KARI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000506">
        <property type="entry name" value="KARI_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013116">
        <property type="entry name" value="KARI_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014359">
        <property type="entry name" value="KARI_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21371">
        <property type="entry name" value="PTHR21371"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01450">
        <property type="entry name" value="IlvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07991">
        <property type="entry name" value="IlvN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000116">
        <property type="entry name" value="IlvC_gammaproteo"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48179">
        <property type="entry name" value="SSF48179"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00465">
        <property type="entry name" value="ilvC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51851">
        <property type="entry name" value="KARI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51850">
        <property type="entry name" value="KARI_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 9 10" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="8 9 10" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0413">Isomerase</keyword>
    <keyword evidence="7 9 10" id="KW-0460">Magnesium</keyword>
    <keyword evidence="6 9 10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0521">NADP</keyword>
    <keyword evidence="9 10" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="KARI N-terminal Rossmann" evidence="11">
        <location>
            <begin position="1"/>
            <end position="182"/>
        </location>
    </feature>
    <feature type="domain" description="KARI C-terminal knotted" evidence="12">
        <location>
            <begin position="183"/>
            <end position="329"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="108"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="24"/>
            <end position="27"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="48"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="51"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="53"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="134"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="195"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="227"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="231"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>2</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9 10">
        <location>
            <position position="252"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010318"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS51850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN95035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="340" mass="37305" checksum="888DB3A96E674172" modified="2018-04-25" version="1">MRVYYDRDCDINLIKDKKVAIVGYGSQGHAHALNLRDSGAKNVVVALREGSPSAKKAEGEGLKVMGIAEAAAWADVVMMTMPDELQAETYKKYIHDNLREGAAIAFAHGLNIHFGLIEPKKGVDVIMMAPKGPGHTVRGEFVKGGGVPCLVAVHQDASGNAIEIGKSYCSGIGGGRSGIIETNFRQECETDLFGEQAVLCGGLVELIRMGFETLVEAGYEPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEYGEYVSGPRILPYEETKARMKAVLSDIQTGKFVRDFMQENAVGQPFFKATRRMNDEHQIEQIGEKLRGMMPWIGKGKMVDKSRN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBX4</accession>
    <name>A0A2M9PBX4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">M20_dimer domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10990</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000646">
        <property type="protein sequence ID" value="PJN95019.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="200"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95019.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="285" mass="30772" checksum="1DD2B105833AF3B5" modified="2018-04-25" version="1" fragment="single">MSDLDRVLAHIDDELDRALDRLFAILRMKSISTDPAYAFECRSCADWLAADLASIGFEAKVRETAGHPVVVGHLRGGAGPTALFYGHYDVQPVDPIELWEDDPFSPRIATRADGTKEIRARGASDDKGQVMTFVEACRAWKTVTGRLPIGVSVLLEGEEESGGVNLPPFLAENAEELRADIGLVCDTGMWDAATPAITTTLRGLVGEEITITAADRDLHSGAYGSAAANPNHVLARILADLHDADGRVTIPGFYDGVPELPQALRESWDKLDFSEADFLGRIGLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC25</accession>
    <name>A0A2M9PC25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10780</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000630">
        <property type="protein sequence ID" value="PJN95052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00039">
        <property type="entry name" value="HTHLYSR"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="1">
        <location>
            <begin position="5"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="12295" checksum="5A482CD64B4C2BD8" modified="2018-04-25" version="1" fragment="single">MQRNLDIAALRSFVTVAEMGGVTRAANQLNLTQSAVSLQIKRLEATFDTPLLARQGRGVVLTTQGEQLLAHARALLEMNDETLARMTGAAVRGEITLGVPDDLLYPRVPRALR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC70</accession>
    <name>A0A2M9PC70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B</fullName>
            <ecNumber evidence="11">6.3.5.-</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">gatB</name>
        <name evidence="11" type="ORF">CNY89_10190</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-aspartyl-tRNA(Asn) + L-glutamine = ADP + 2 H(+) + L-asparaginyl-tRNA(Asn) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14513"/>
            <dbReference type="Rhea" id="RHEA-COMP:9674"/>
            <dbReference type="Rhea" id="RHEA-COMP:9677"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78515"/>
            <dbReference type="ChEBI" id="CHEBI:78516"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + H2O + L-glutamine + L-glutamyl-tRNA(Gln) = ADP + H(+) + L-glutamate + L-glutaminyl-tRNA(Gln) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17521"/>
            <dbReference type="Rhea" id="RHEA-COMP:9681"/>
            <dbReference type="Rhea" id="RHEA-COMP:9684"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:78520"/>
            <dbReference type="ChEBI" id="CHEBI:78521"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="4">Heterotrimer of A, B and C subunits.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GatB/GatE family. GatB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.-" evidence="11"/>
    <dbReference type="EMBL" id="PHNO01000581">
        <property type="protein sequence ID" value="PJN95150.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050566">
        <property type="term" value="F:asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050567">
        <property type="term" value="F:glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.380">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00121">
        <property type="entry name" value="GatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004413">
        <property type="entry name" value="Apn/Gln-ADT_bsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017959">
        <property type="entry name" value="Asn/Gln-tRNA_amidoTrfase_suB/E"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006075">
        <property type="entry name" value="Asn/Gln-tRNA_Trfase_suB/E_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003789">
        <property type="entry name" value="Asn/Gln_tRNA_amidoTrase-B-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042114">
        <property type="entry name" value="GatB_C_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017958">
        <property type="entry name" value="Gln-tRNA_amidoTrfase_suB_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11659">
        <property type="entry name" value="PTHR11659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02934">
        <property type="entry name" value="GatB_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF89095">
        <property type="entry name" value="SSF89095"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00133">
        <property type="entry name" value="gatB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01234">
        <property type="entry name" value="GATB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 11" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="GatB_N" evidence="10">
        <location>
            <begin position="1"/>
            <end position="284"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="364"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00000924"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00005306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00024799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02934"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95150.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="364" mass="40258" checksum="44317E61975450A5" modified="2018-04-25" version="1" fragment="single">MIGLEVHAQVTSASKLFSGASTTFGAEPNTNVSLVDAAMPGMLPVLNAFCVEQAVRTGLGLKARINLFSRFDRKNYFYPDLPQGYQISQLYHPIVGEGEVLVDMAPGVARKVRVERIHLEQDAGKSIHDLDPEATLVDLNRTGVALMEIVSKPDIRGPEEAAEYVRKLRQILRYLGTCDGNMQEGSLRADVNVSVRPKGSTEFGTRCEIKNMNSMRFITQAIEYEARRQIAILEDGGRVDQETRLYDPNRGETRSMRSKEEAHDYRYFPDPDLLPLELTADWVEGVAVGLPELPDAKKARFVLDYGMTEYDAGVLTAEVASADFFEAVASGRDGKQAANWVINELFGRLNKEGRGIETSPIAPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB5</accession>
    <name>A0A2M9PCB5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000566">
        <property type="protein sequence ID" value="PJN95185.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011704">
        <property type="entry name" value="ATPase_dyneun-rel_AAA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001270">
        <property type="entry name" value="ClpA/B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07728">
        <property type="entry name" value="AAA_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00300">
        <property type="entry name" value="CLPPROTEASEA"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="25"/>
            <end position="183"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95185.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="280" mass="31904" checksum="DFD8F0DF5CE48B60" modified="2018-04-25" version="1">MKFNGSDDYVATSDLKVAVNAAITLERPLLVKGEPGTGKTELARQIARALDLPLIEWSVKSTTKAHQGLYEYDAVSRLRDSQLGEARVGDVRNYIRPGPLWRAFGAEDKVVLLIDEIDKADIEFPNDLLQELDRMEFFVYETGETIRAERRPIVIITSNNEKELPDAFLRRCFFHYIRFPDAETLERIVAVHFPGIKPALMRAALTRFFEIRETPGLRKKPSTSEVLDWLKLLLAEDLAAEDLRADPGQVLPRLHGALLKNEQDVHLFERLAFLARGRRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF3</accession>
    <name>A0A2M9PCF3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2474 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000543">
        <property type="protein sequence ID" value="PJN95225.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018895">
        <property type="entry name" value="DUF2474"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10617">
        <property type="entry name" value="DUF2474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="13"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95225.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3597" checksum="C3DFDFDA549BCBCF" modified="2018-04-25" version="1" fragment="single">MPGRDPEGPPRPLLRRLGWLALIWGMSVAALAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP3</accession>
    <name>A0A2M9PCP3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Single-stranded DNA-binding protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09385</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000516">
        <property type="protein sequence ID" value="PJN95288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003697">
        <property type="term" value="F:single-stranded DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04496">
        <property type="entry name" value="SSB_OBF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00984">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000424">
        <property type="entry name" value="Primosome_PriB/ssb"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011344">
        <property type="entry name" value="ssDNA-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10302">
        <property type="entry name" value="PTHR10302"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00436">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002070">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00621">
        <property type="entry name" value="ssb"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50935">
        <property type="entry name" value="SSB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1 3 4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13920" checksum="86A8E747D55B51B5" modified="2018-04-25" version="1" fragment="single">MAGSVNKVILVGNLGRDPEVRSFPNGGKVVNLRIATSETWRDKQSGERKERTEWHSVAIFNENLGRIAEQYLRKGSTVYIEGQLETRKWQDQSGQDRYSTEVVLRQFRGELDPASAAGARAAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS1</accession>
    <name>A0A2M9PCS1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000493">
        <property type="protein sequence ID" value="PJN95341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7106" checksum="CABB4C33D744C1B5" modified="2018-04-25" version="1" fragment="single">KATRPFLTSMLARLPWRVVTATLALATGTAAGACFSLANLLWAVGDVAIGALDAPPIARAEPFSAPARE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS7</accession>
    <name>A0A2M9PCS7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA polymerase sigma factor RpoD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08980</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000487">
        <property type="protein sequence ID" value="PJN95356.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000943">
        <property type="entry name" value="RNA_pol_sigma70"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007630">
        <property type="entry name" value="RNA_pol_sigma70_r4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04545">
        <property type="entry name" value="Sigma70_r4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00046">
        <property type="entry name" value="SIGMA70FCT"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00716">
        <property type="entry name" value="SIGMA70_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RNA_pol_sigma70" evidence="1">
        <location>
            <begin position="49"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS00716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95356.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10428" checksum="6CE68EDAA410EBF5" modified="2018-04-25" version="1" fragment="single">EDKNAILPLDSAIQGNLKETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCV5</accession>
    <name>A0A2M9PCV5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">AAA_31 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09040</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000493">
        <property type="protein sequence ID" value="PJN95342.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025669">
        <property type="entry name" value="AAA_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13614">
        <property type="entry name" value="AAA_31"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_31" evidence="2">
        <location>
            <begin position="87"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="166"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95342.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="21186" checksum="CB0140D5D5A0E3A9" modified="2018-04-25" version="1">MMKVYAPDAAKVLRHFSASESAELLGVSTGFLRKLHFENRIREVDAGPGGRRQYTLTDINAIRAQMELQAKTPGTYLPGRRPGDALQVLSFLNFKGGSGKTTCAIHAAQRLALRGYRVLAIDIDPQASLTTLFGYRPEYDFLGGGTVYDALRYDAPAPMAEVVVAGDGSPASRRPEGFGPCRRRGTASIRPRRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD3</accession>
    <name>A0A2M9PDD3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Alcohol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000416">
        <property type="protein sequence ID" value="PJN95522.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95522.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6183" checksum="509EB0677B94ACA1" modified="2018-04-25" version="1" fragment="single">FCERLGLDMALRAHGVPRDDLPASAREAHGIRRLLDFNPVDLSEADILEIYEAAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ4</accession>
    <name>A0A2M9PDJ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="12">LexA repressor</fullName>
            <ecNumber evidence="12">3.4.21.88</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">lexA</name>
        <name evidence="16" type="ORF">CNY89_07480</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="12">Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="12">
            <text>Hydrolysis of Ala-|-Gly bond in repressor LexA.</text>
            <dbReference type="EC" id="3.4.21.88"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="12">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 12 13">Belongs to the peptidase S24 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.21.88" evidence="12"/>
    <dbReference type="EMBL" id="PHNO01000378">
        <property type="protein sequence ID" value="PJN95609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004252">
        <property type="term" value="F:serine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd06529">
        <property type="entry name" value="S24_LexA-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00015">
        <property type="entry name" value="LexA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006200">
        <property type="entry name" value="LexA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039418">
        <property type="entry name" value="LexA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036286">
        <property type="entry name" value="LexA/Signal_pep-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006199">
        <property type="entry name" value="LexA_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006197">
        <property type="entry name" value="Peptidase_S24_LexA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015927">
        <property type="entry name" value="Peptidase_S24_S26A/B/C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01726">
        <property type="entry name" value="LexA_DNA_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00717">
        <property type="entry name" value="Peptidase_S24"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00726">
        <property type="entry name" value="LEXASERPTASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51306">
        <property type="entry name" value="SSF51306"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00498">
        <property type="entry name" value="lexA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 12 13" id="KW-0068">Autocatalytic cleavage</keyword>
    <keyword evidence="4 12" id="KW-0227">DNA damage</keyword>
    <keyword evidence="10 12" id="KW-0234">DNA repair</keyword>
    <keyword evidence="3 12" id="KW-0235">DNA replication</keyword>
    <keyword evidence="8 12" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="5 12 13" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 12" id="KW-0678">Repressor</keyword>
    <keyword evidence="11 12" id="KW-0742">SOS response</keyword>
    <keyword evidence="9 12" id="KW-0804">Transcription</keyword>
    <keyword evidence="7 12" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="LexA_DNA_bind" evidence="15">
        <location>
            <begin position="2"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_S24" evidence="14">
        <location>
            <begin position="109"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="H-T-H motif" evidence="12">
        <location>
            <begin position="26"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="active site" description="For autocatalytic cleavage activity" evidence="12">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <feature type="active site" description="For autocatalytic cleavage activity" evidence="12">
        <location>
            <position position="190"/>
        </location>
    </feature>
    <feature type="site" description="Cleavage; by autolysis" evidence="12">
        <location>
            <begin position="116"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007484"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022813"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU003991"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00717"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="Pfam" id="PF01726"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN95609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25460" checksum="6A62559DACF94C24" modified="2018-04-25" version="1">MLTRKQYDLLHFIHRRLQTEGVPPSFEEMKDALDLRSKSGIHRLITALEERGFIRRLAHRARAIEIVKLPDSLADTAEPLGFRPSVVEGGRPERPAAALTVEASSIELPVMGRIAAGTPIEAIQQVSHNIAVPSTMLASRGRHYALEVKGDSMILAGINNGDIVVIQEQSTAENGEIVVALVEGQEATLKTFRRRGSTIALEAANPAYETRLYQDHQVRVQGKLVGLIRTY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDL4</accession>
    <name>A0A2M9PDL4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 13">Biotin carboxylase</fullName>
            <ecNumber evidence="5 13">6.3.4.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11 13">Acetyl-coenzyme A carboxylase biotin carboxylase subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="16" type="primary">accC</name>
        <name evidence="16" type="ORF">CNY89_07275</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 13">This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 13">
            <text>ATP + hydrogencarbonate + N(6)-biotinyl-L-lysyl-[protein] = ADP + H(+) + N(6)-carboxybiotinyl-L-lysyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13501"/>
            <dbReference type="Rhea" id="RHEA-COMP:10505"/>
            <dbReference type="Rhea" id="RHEA-COMP:10506"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17544"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:83144"/>
            <dbReference type="ChEBI" id="CHEBI:83145"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.14"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3 13">Lipid metabolism; malonyl-CoA biosynthesis; malonyl-CoA from acetyl-CoA: step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 13">Acetyl-CoA carboxylase is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase and the two subunits of carboxyl transferase in a 2:2 complex.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.14" evidence="5 13"/>
    <dbReference type="EMBL" id="PHNO01000364">
        <property type="protein sequence ID" value="PJN95641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00655">
        <property type="reaction ID" value="UER00711"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003989">
        <property type="term" value="F:acetyl-CoA carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004075">
        <property type="term" value="F:biotin carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:2001295">
        <property type="term" value="P:malonyl-CoA biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004549">
        <property type="entry name" value="Acetyl_CoA_COase_biotin_COase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005482">
        <property type="entry name" value="Biotin_COase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011054">
        <property type="entry name" value="Rudment_hybrid_motif"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02785">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00878">
        <property type="entry name" value="Biotin_carb_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51246">
        <property type="entry name" value="SSF51246"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00514">
        <property type="entry name" value="accC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00867">
        <property type="entry name" value="CPSASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9 12 13" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="10 13" id="KW-0092">Biotin</keyword>
    <keyword evidence="13" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7 13" id="KW-0436">Ligase</keyword>
    <keyword evidence="13" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="8 12 13" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="15">
        <location>
            <begin position="1"/>
            <end position="444"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="14">
        <location>
            <begin position="120"/>
            <end position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000861"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003761"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00013263"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00017242"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023267"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00033786"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="RuleBase" id="RU365063"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN95641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="451" mass="49139" checksum="68AAB320285D9422" modified="2018-04-25" version="1">MFKKVLIANRGEIALRVHRACKEMGIQTVAIHSTADSDAMHVRMADESVCVGPPPAGQSYLSMPNIFAACEITGAEAIHPGYGFLSENATFVQIVEDHGLTFIGPSAEHIRLMGDKITAKDTMRRLGVPCVPGSDGGVATVDEARKVAEEVGYPVIVKATAGGGGRGMKLARTADDLESAFQTARAEAKAAFGDDEVYLEKYLGTPRHIEIQVFGDGRGRAVHLGERDCSLQRRHQKVLEEAPSPVIDAEQRARIGKLCAEAVAKIGYSGAGTIEFLYENGEFYFIEMNTRLQVEHPVTEAIYDVDLVQEQIRVAAGLPMSFRQEDLTPSGHAIECRINAESLPDFRPSPGRITTYYAPGGLGVRMDSAIYGGYTIPPYYDSLLGKLIVHGRTRALALARLKRALSELIVDGVQTTTPLFHELLEQPDIQAGRYNIHWLEKFLAEATGEEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN2</accession>
    <name>A0A2M9PDN2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07315</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000367">
        <property type="protein sequence ID" value="PJN95633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016545">
        <property type="entry name" value="UCP009120_prtse"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF009120">
        <property type="entry name" value="UCP009120_prtse"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="251" mass="27639" checksum="50D695E462AA996B" modified="2018-04-25" version="1">MTYCVGLLLDEGIVMMSDTRTNAGIDNISTFRKMFVFEQPGERVIVLMTSGNLSVTQTVIAKLSHEIAREGASPQTSIMLAETMLDVAEIVGTTLFDVSMTVRERMRKIDAESSPSASMIVGGQRRGGKMRLFHIYREGNFIAATEDTPYLQIGEFKYGKPILDRVVRPETSLEEGRKVALLSMDSTMRSNLSVGMPLDLVVIPRDGYKLGSRERFEPGDPVFSAMSDAWSRVLREGFANMATGPALPVGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY3</accession>
    <name>A0A2M9PDY3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06830</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000333">
        <property type="protein sequence ID" value="PJN95718.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FCD" evidence="4">
        <location>
            <begin position="3"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF07729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95718.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13669" checksum="24B1017FFAAEAC6F" modified="2018-04-25" version="1" fragment="single">LVARKVDLPLARLRRDHCDTIEEAQRAMSPGLTRRAILTDLSLHDALGAGLDNPFAAEAYRVNRNRIAVIQNTRPFLPDRIVPAMEEHLAIIDALDRRDAEAAVAGLAEHCRTTLRWWGILV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDY7</accession>
    <name>A0A2M9PDY7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_06810</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 4">Belongs to the glycosyl hydrolase 32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000331">
        <property type="protein sequence ID" value="PJN95724.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.115.10.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001362">
        <property type="entry name" value="Glyco_hydro_32"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013189">
        <property type="entry name" value="Glyco_hydro_32_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013148">
        <property type="entry name" value="Glyco_hydro_32_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023296">
        <property type="entry name" value="Glyco_hydro_beta-prop_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08244">
        <property type="entry name" value="Glyco_hydro_32C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00251">
        <property type="entry name" value="Glyco_hydro_32N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00640">
        <property type="entry name" value="Glyco_32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75005">
        <property type="entry name" value="SSF75005"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_hydro_32N" evidence="6">
        <location>
            <begin position="367"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_hydro_32C" evidence="7">
        <location>
            <begin position="460"/>
            <end position="549"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="549"/>
            <end position="645"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="5">
        <location>
            <begin position="555"/>
            <end position="633"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023295"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF00251"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95724.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="645" mass="68645" checksum="E11CEE4A6781F7CB" modified="2018-04-25" version="1" fragment="single">GTTIADFEQGLPEGWTGTGDFATLAPVVAGRANGPVGLAGWDGVGLLSTFNVPDGSYDAPTGKLTSPEFVLDARYINFKIGGGDHTADPLTQLQLVVDGEVVRTMSGGWSEALRQAHWDVGDLMGRTAQIRVVDQNAGGFGYLMVDSIEMNDALPVAPTVFEDWEVQGPPPGWIASGDFAGSNGQGPIGTSDGGGFGSDVGRLLDTFYWGDEAVGALTSDAFTISEDWINVRMGGGGHTGAEGTTVDLIVDGEVVRQATGAFSGVLDWTSWDVSEFAGQEAQIRINDASSSASWGHLFVDRIEFSQEAFRPTELSPTAISLIVDGERVATASGDFSEVLEWKGWDVSQWAGKEARLEILDANTGSWGHLNLDQITFADSLYPSSAELANWLDYGADHYATISWHNLPEGSRPMLTSWMNNWDYAASIPTGDFRGAMTLPREYSLREVDGEIRVVQTPVAELQALRREHFTAENLTLAGEALNGPLSGKALEIVAVFDAAAASADEFGVKLRVGAGEETLVGYDVAAGEAFVDRTNSGFLPSEAFAARHGARSRSWRTARSSSTSSSTPPRWNSSPMTASGPSPTRSSPMRKASGSSSTPREARSISSISTSGGFPRTKASRSRRNSTAARRAMTCWSRSRVPSPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE05</accession>
    <name>A0A2M9PE05_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Lipoyl synthase</fullName>
            <ecNumber evidence="6">2.8.1.8</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Lip-syn</fullName>
            <shortName evidence="6">LS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Lipoic acid synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Sulfur insertion protein LipA</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6 9" type="primary">lipA</name>
        <name evidence="9" type="ORF">CNY89_06495</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>[[Fe-S] cluster scaffold protein carrying a second [4Fe-4S](2+) cluster] + 4 H(+) + N(6)-octanoyl-L-lysyl-[protein] + 2 oxidized [2Fe-2S]-[ferredoxin] + 2 S-adenosyl-L-methionine = (R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + 2 5'-deoxyadenosine + [[Fe-S] cluster scaffold protein] + 4 Fe(3+) + 2 hydrogen sulfide + 2 L-methionine + 2 reduced [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:16585"/>
            <dbReference type="Rhea" id="RHEA-COMP:9928"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="Rhea" id="RHEA-COMP:10475"/>
            <dbReference type="Rhea" id="RHEA-COMP:14568"/>
            <dbReference type="Rhea" id="RHEA-COMP:14569"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17319"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:29919"/>
            <dbReference type="ChEBI" id="CHEBI:33722"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57844"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:78809"/>
            <dbReference type="ChEBI" id="CHEBI:83100"/>
            <dbReference type="EC" id="2.8.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="6">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="6">Binds 2 [4Fe-4S] clusters per subunit. One cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine.</text>
    </comment>
    <comment type="pathway">
        <text evidence="6">Protein modification; protein lipoylation via endogenous pathway; protein N(6)-(lipoyl)lysine from octanoyl-[acyl-carrier-protein]: step 2/2.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the radical SAM superfamily. Lipoyl synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.8.1.8" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000308">
        <property type="protein sequence ID" value="PJN95779.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00538">
        <property type="reaction ID" value="UER00593"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016992">
        <property type="term" value="F:lipoate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102552">
        <property type="term" value="F:lipoyl synthase activity (acting on glycine-cleavage complex H protein"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102553">
        <property type="term" value="F:lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00206">
        <property type="entry name" value="Lipoyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003698">
        <property type="entry name" value="Lipoyl_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10949">
        <property type="entry name" value="PTHR10949"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005963">
        <property type="entry name" value="Lipoyl_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00271">
        <property type="entry name" value="lipoyl_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00510">
        <property type="entry name" value="lipA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0408">Iron</keyword>
    <keyword evidence="5 6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 6" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="8">
        <location>
            <begin position="69"/>
            <end position="287"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="58"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="63"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="84"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="88"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>2</label>
            <note>4Fe-4S-S-AdoMet</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="298"/>
        </location>
        <ligand>
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
            <label>1</label>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95779.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="318" mass="35198" checksum="10A6DC358CC12B20" modified="2018-04-25" version="1">MATTRDIKDRSQRHPEKAHRPDTPILKKPNWIRVKAPTSEGYRETRDILRANRLVTVCEQASCPNVGECWSQGHATMMIMGDICTRGCTFCNIATGRPDALDPFEPGRVAVAVEKLGLRHVVITSVDRDDLEDGGAGHIAQTIRAVRRKTPETTIEVLTPDFLKCPASAIEAVVEARPDVFNHNLETVPGLYPEVRPGARYFHSLRLLQRVKELDPACFTKSGIMVGLGEDRQAVLQVMDDLRAADVDFITIGQYLQPTPKHHAVARFVTPEEFAAYEKAAYAKGFLMVSATPLTRSSYHAGDDFARLRAARLAKLGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE82</accession>
    <name>A0A2M9PE82_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Cytochrome c oxidase subunit 1</fullName>
            <ecNumber evidence="8">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">ctaD</name>
        <name evidence="11" type="ORF">CNY89_06255</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6 8">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000294">
        <property type="protein sequence ID" value="PJN95818.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015990">
        <property type="term" value="P:electron transport coupled proton transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023616">
        <property type="entry name" value="Cyt_c_oxase-like_su1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023615">
        <property type="entry name" value="Cyt_c_Oxase_su1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014241">
        <property type="entry name" value="Cyt_c_oxidase_su1_bac"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01165">
        <property type="entry name" value="CYCOXIDASEI"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02891">
        <property type="entry name" value="CtaD_CoxA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50855">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00077">
        <property type="entry name" value="COX1_CUB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0186">Copper</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7" id="KW-0349">Heme</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="32"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="74"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="118"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="161"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="199"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="245"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="282"/>
            <end position="304"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="316"/>
            <end position="342"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="354"/>
            <end position="380"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="392"/>
            <end position="412"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="424"/>
            <end position="449"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="469"/>
            <end position="491"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="582"/>
            <end position="600"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="606"/>
            <end position="623"/>
        </location>
    </feature>
    <feature type="domain" description="COX1" evidence="10">
        <location>
            <begin position="15"/>
            <end position="529"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="643"/>
            <end position="666"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="9">
        <location>
            <begin position="648"/>
            <end position="666"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000370"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50855"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95818.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="666" mass="72549" checksum="E9B197D61781E2AB" modified="2018-04-25" version="1">MSRGLALHKALDALWRTPPGWGRLSAVNHTTVGLRFIVAATVFFAIGGLLAMLIRAQLATPGSAFLGAEVYNQVFTMHGTVMMFLFAIPMFEGVAIYLLPKLLGARDLAFPRLTAYGFWCYVLGGAILIGALLAGVAPHSGWFMYTPLSSGIYSPGINGDVWLLGVTFVEISALSAAVEIIVSILKLRAPGMSLERMPILAWYLLVTAFMMLFGFPPLILGSILLEVERAAGLPFFDPTRGGDPLLWQHLFWLFGHPEVYIIFLPAAGMISTMLPAFARSELVAQPAIVVAAIATGFLSFGLWVHHMFTVGIPHLALAFFSAASGLVAVPTAVQIFAWIGTIARGRPRWDVPTLWLAGFFVIFVLGGLTGVMLAMVPFNAQAHDSHFVVAHLHYVLVGGFVFPVIAAIYYWMPHVTGRVSDLRLSVPAFWLVFGGFNLTFFLMHLTGLLGMPRRVYVYPENAGWTALNLLSSVGGFVMTAGFALVAVDLLVQTRFGRRFRRDPWEAHSLEWAIPTPPPSYAFASLPKVEVRADRLAPRELGPRLARGEGYLGFTRHGWCETLGVDPGTGAPTEVVVLPRPSFLPLWTGLATLAFVLCLLVKLYWLAPLPLVVVVALFLAWSGGRRASRSSARNAGWPCGGRGCRSGRARSAPHGRRSRAIRRAACR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED7</accession>
    <name>A0A2M9PED7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sorbitol dehydrogenase</fullName>
            <ecNumber evidence="2">1.1.99.21</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05675</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the short-chain dehydrogenases/reductases (SDR) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.99.21" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000259">
        <property type="protein sequence ID" value="PJN95917.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0047833">
        <property type="term" value="F:D-sorbitol dehydrogenase (acceptor) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00106">
        <property type="entry name" value="adh_short"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="221"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000363"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95917.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="221" mass="23301" checksum="08AF922304374227" modified="2018-04-25" version="1" fragment="single">MRLQGKSALITGAARGIGAAFAKAYVAEGATVAIGDIDLGRAEETAALIGPKAYALRLDVTDQASIDDCIAGVVEKAGHLDILVNNAALFDMAPIVEITRASYDRLYAINVAGTLFTMQAAAKQMIKQGKGGKIVNMASQAGRRGEALVAIYCSTKACVISLTQSAGLDLIRHGINVNAIAPGVVDGEHWEHVDAMFAKYENRPLGEKKRIVGESVPYGRM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF9</accession>
    <name>A0A2M9PEF9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">T2SSC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_05625</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000256">
        <property type="protein sequence ID" value="PJN95925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024961">
        <property type="entry name" value="T2SS_GspC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11356">
        <property type="entry name" value="T2SSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="domain" description="T2SSC" evidence="5">
        <location>
            <begin position="10"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF11356"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11147" checksum="5BA1745EA4AEFFC8" modified="2018-04-25" version="1" fragment="single">PAPEQGIAPAPVSLESILGLSPFGRLAHSATEEAPAAETTLGLTLHGVAIAAEPGRSSAIVSVDAEPARVYLVGAAITEAATLEAVFADHVVLRVNGNPEILSFPESGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ0</accession>
    <name>A0A2M9PEJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05410</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000245">
        <property type="protein sequence ID" value="PJN95956.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019226">
        <property type="entry name" value="DUF2158"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09926">
        <property type="entry name" value="DUF2158"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95956.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6695" checksum="2D56FA8FF1625767" modified="2018-04-25" version="1">MEAIKPGDVVKLKSGGKAMVVEDVSGGLAHVCAERNGVLMRWQVSIVALSIAEPSKGLTYRGAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK3</accession>
    <name>A0A2M9PEK3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000242">
        <property type="protein sequence ID" value="PJN95969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14091" checksum="544C4085D590C3B7" modified="2018-04-25" version="1">MVVQEALEADHPRGVQPVDLGDGAAQAGMARIRVDVETVGSGAERLDRCRAGAEGILVGAELQRRRLAGQRRLAALVDGDVEHARLGTQVGVRPDHARVLPAGPLRFQSNSCRNAAETLRRPLTPCQGADRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ6</accession>
    <name>A0A2M9PEQ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF2948 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000225">
        <property type="protein sequence ID" value="PJN96013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021335">
        <property type="entry name" value="DUF2948"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11164">
        <property type="entry name" value="DUF2948"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5326" checksum="B5E4ED2151547708" modified="2018-04-25" version="1" fragment="single">MTDARFEDGAERPLRLRAETAEDLGVISALVQDAVAEVKDAAWTPKRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES0</accession>
    <name>A0A2M9PES0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04945</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CbiQ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000218">
        <property type="protein sequence ID" value="PJN96033.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003339">
        <property type="entry name" value="ABC/ECF_trnsptr_transmembrane"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02361">
        <property type="entry name" value="CbiQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="36"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="65"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008564"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96033.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="207" mass="22481" checksum="1F5FEB100FD32039" modified="2018-04-25" version="1">MISLTSPVETRAHRWPAGLKLGALCLASTGLFLTESPALLAGALLLTLALYTLPGRLFLHEGLRGLRVVLPFVVILLAWHAVIGDLRGGVLITLRMVTLIAFANLATMTTTLEDLVDLVHALTAPLRRLGVPTYPLETAIPLVIRFTPVLVGKAETMALAWRARSRRRPGWRLILPLTLAALDDADHVGESLRARGGPIGRSEKERK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX1</accession>
    <name>A0A2M9PEX1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04680</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000203">
        <property type="protein sequence ID" value="PJN96083.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96083.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10574" checksum="CE1A1223C97D193D" modified="2018-04-25" version="1">MPHNRLPVAEAPINDRLLATLIELFEKEPDATVTEAEAALMFQAAPGCLRELLTYRQLLGRQYEGAWLDSVVACSSNVVRLPDNRDRRPDPQGTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF43</accession>
    <name>A0A2M9PF43_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04195</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000179">
        <property type="protein sequence ID" value="PJN96163.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd07377">
        <property type="entry name" value="WHTH_GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00895">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="4">
        <location>
            <begin position="4"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96163.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="220" mass="24697" checksum="8186294E3A4F732A" modified="2018-04-25" version="1">MNTVPNVVRIREALENAIVSGRFAPGAKLDPEALAREFDCSRTPIREALQQLEASGLVRIAAKRGTFVSEWTVDELAERFEVMAELEAVCARLAARRVTEAELAELEAAHQACRRESEAGDIDAYYAENSTFHHCIYRATHNAFLEREASRLHAVLQPYRRMQLQVRNRMARSLAEHDAVMAAIRSGDDQAAAEAMRNHVVIQGDRFHDLLAALRMDRTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF52</accession>
    <name>A0A2M9PF52_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000192">
        <property type="protein sequence ID" value="PJN96114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014624656" evidence="1">
        <location>
            <begin position="23"/>
            <end position="265"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="265" mass="28440" checksum="0C1C630A2032C036" modified="2018-04-25" version="1">MRLFPRIAAALAAAIVATAASAQSSADLAKKLSNPVAAMISVPFQYNYNDGFLGGEAEQSYVNIQPVIPISLNDRWNVISRTILPVVYQTGFKPDGGSQFGFGLTTQSFFFSPKAPTAAGIIWGVGPAFQLPTATDDIANNQWGAGVTAVALKQAQGWTLGMLANQIWSTSGNDRYGETSVAFLQPFVSYTTAKATSFTLNTESTYDWEDTQWSVPINAMVAQIIKIGGKPVQLQAGARYWAESPKEGPDGWGLRLAVVYLFPKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF64</accession>
    <name>A0A2M9PF64_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Damage-inducible protein CinA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000169">
        <property type="protein sequence ID" value="PJN96195.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96195.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="2934" checksum="54055F5CB8282731" modified="2018-04-25" version="1" fragment="single">DFGPLGRQAVRQAAVETALDLLLQALAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF87</accession>
    <name>A0A2M9PF87_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Flagellar basal body rod protein FlgB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">flgB</name>
        <name evidence="1" type="ORF">CNY89_03965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000168">
        <property type="protein sequence ID" value="PJN96196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0966">Cell projection</keyword>
    <keyword evidence="1" id="KW-0969">Cilium</keyword>
    <keyword evidence="1" id="KW-0282">Flagellum</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="5827" checksum="98652F2D15C8EE9C" modified="2018-04-25" version="1" fragment="single">MDTKLSLLRLASDLAAHATARQSVIAENVAHADTPGYRARDIPGFAEAMAEPTGF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB0</accession>
    <name>A0A2M9PFB0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Flagellar basal-body rod protein FlgF</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">flgF</name>
        <name evidence="7" type="ORF">CNY89_03750</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subunit">
        <text evidence="4">The basal body constitutes a major portion of the flagellar organelle and consists of five rings (E,L,P,S, and M) mounted on a central rod. The rod consists of about 26 subunits of FlgG in the distal portion, and FlgB, FlgC and FlgF are thought to build up the proximal portion of the rod with about 6 subunits each.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 4">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 4">Belongs to the flagella basal body rod proteins family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000157">
        <property type="protein sequence ID" value="PJN96240.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030694">
        <property type="term" value="C:bacterial-type flagellum basal body, rod"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001444">
        <property type="entry name" value="Flag_bb_rod_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019776">
        <property type="entry name" value="Flagellar_basal_body_rod_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020013">
        <property type="entry name" value="Flagellar_FlgE/F/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010930">
        <property type="entry name" value="Flg_bb/hook_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037925">
        <property type="entry name" value="FlgE/F/G-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012836">
        <property type="entry name" value="FlgF"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00460">
        <property type="entry name" value="Flg_bb_rod"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06429">
        <property type="entry name" value="Flg_bbr_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF117143">
        <property type="entry name" value="SSF117143"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03506">
        <property type="entry name" value="FlgEFG_subfam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02490">
        <property type="entry name" value="flgF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00588">
        <property type="entry name" value="FLAGELLA_BB_ROD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0975">Bacterial flagellum</keyword>
    <keyword evidence="7" id="KW-0966">Cell projection</keyword>
    <keyword evidence="7" id="KW-0969">Cilium</keyword>
    <keyword evidence="7" id="KW-0282">Flagellum</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flg_bb_rod" evidence="5">
        <location>
            <begin position="7"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Flg_bbr_C" evidence="6">
        <location>
            <begin position="167"/>
            <end position="227"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023143"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU362116"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96240.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="240" mass="25218" checksum="C49B0C8B712D0121" modified="2018-04-25" version="1">MDLPGYVALTRATGLLKTMQAVANNIANVSTTGFRREGVLFAEMVEALPAEGGSVAMTAARGRVTSQEQGALVETGGALDMAIEGTGYFTVLTPQGERLTRAGAFARSADGEIVDPAGHPLLDEGGGPIVVPFEAQTVALASDGTLSVDGEPVARIGLVTVEDQAKLFREAGTLFRAEGDVLPTEEGRLVQGSLEQSNVNPVAEMARMIEVQRAYEYGQKLLDSEDGRIRLVVRTLGSQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB9</accession>
    <name>A0A2M9PFB9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03910</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000165">
        <property type="protein sequence ID" value="PJN96212.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014650802" evidence="4">
        <location>
            <begin position="21"/>
            <end position="419"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96212.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="419" mass="45021" checksum="DA4A6E6F8FC340EA" modified="2018-04-25" version="1">MTRTLFASLMAGLLASAAHAGDVRIMWYSDGNEGEVLNDLLARFSAENPDIHVTVDNVSFSVVREQLPIQLEAGQGPDIARTPDWKSQARHWLDLRPLLPDAAYWNENFGAQADWMRPDGSDAITGFMTQLTLTGGFANKTLFDQAGVALPGEGATWADWAAAARQVAESQQVPFPLALDRSGHRLTAPIYSYGGNYIGPDGKPAPLDVGAKAFLTDFIGWTEDGTAMKDVWVSAAGSTYRAASEDFINAQLVYYYSGSWQIPNFAAKIGDAFDWAATGSPCGPAACTGNVGGAGLMAVKYTKNPQDVAKVMDFLAREDVYREFIERSLFIPAHKAVLAGPLDYQTDDPQVKAALDAFIAAAATTSPEIQKLPAWRWSDAIYGALATRIGQAAAGELSPDEAFARIDADVAQKVKDSGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH9</accession>
    <name>A0A2M9PFH9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Rieske (2Fe-2S) protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03355</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000135">
        <property type="protein sequence ID" value="PJN96303.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015879">
        <property type="entry name" value="Ring_hydroxy_dOase_asu_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001663">
        <property type="entry name" value="Rng_hydr_dOase-A"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43756">
        <property type="entry name" value="PTHR43756"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00848">
        <property type="entry name" value="Ring_hydroxyl_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00090">
        <property type="entry name" value="RNGDIOXGNASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rieske" evidence="6">
        <location>
            <begin position="44"/>
            <end position="150"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96303.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="414" mass="46181" checksum="B4DB74FC5AA56A7C" modified="2018-04-25" version="1">MIADATNILSLLETRRPDHALPRGFYTDPAIYEFDLDAIFYREWLFAIPACEIPQTGNFVTMQVGQYPVVIVRGADGRIRAFHNACRHRGSRVCTALKGSAPKLVCPYHQWTYELDGRLLFARDMGPGFDASQYGLKPISCAEAGGLVYVCLADSPPAIEPFLEKAGRYLAPHRLDQAKVAFESTIVENGNWKLVIENNRECYHCAGSHPELCRTYPDRPGFTSMDESGAMEPAVTAHWEKCEAAGLPSKFVIAPSHQWRFARIPLLGAGESYTMDGKAAVPNKRLSAAPFADAGSLLNFHYPNTWNHFLADHSIVFRVLPISATQTEVTTKWLVHKDAVEGVDYDLGNLTRVWVATNDEDRQVVEENQRGINSPAFVPGPYSQIQEDGVIQFVEWYCGTVRRRFDRGAPLAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI3</accession>
    <name>A0A2M9PFI3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L2</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">rplB</name>
        <name evidence="9" type="ORF">CNY89_03305</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Part of the 50S ribosomal subunit. Forms a bridge to the 30S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the universal ribosomal protein uL2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96313.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.950.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01320_B">
        <property type="entry name" value="Ribosomal_L2_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022666">
        <property type="entry name" value="Rbsml_prot_L2_RNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002171">
        <property type="entry name" value="Ribosomal_L2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005880">
        <property type="entry name" value="Ribosomal_L2_bac/org-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022669">
        <property type="entry name" value="Ribosomal_L2_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022671">
        <property type="entry name" value="Ribosomal_L2_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014726">
        <property type="entry name" value="Ribosomal_L2_dom3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13691">
        <property type="entry name" value="PTHR13691"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00181">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03947">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002158">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01383">
        <property type="entry name" value="Ribosomal_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01382">
        <property type="entry name" value="Ribosomal_L2_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01171">
        <property type="entry name" value="rplB_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00467">
        <property type="entry name" value="RIBOSOMAL_L2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 6 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 6" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 6" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L2_C" evidence="8">
        <location>
            <begin position="124"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="227"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005636"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01320"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM01382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96313.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="30458" checksum="8FD15AE5965B617B" modified="2018-04-25" version="1">MALKSYKPTTPGQRGLVLIDRSELWKGRPVKSLTEGLTGNGGRNNTGRITMRRRGGGVKRLYRIVDFRRTKFDVPAKVIRIEYDPNRSAFIALIGYADGEQAYILAPQRLAAGDSVISGAKADIKPGNAMPFSAMPIGTIVHNVEMKPGKGGQIARAAGTYAQFVGRDGGYAQIRLSSGELRLVRQECMATIGAVSNPDNSNQNFGKAGRMRLLGYRPKVRGVVMNPIDHPHGGGEGRTSGGRHPVTPWGKPTKGARTRKNKSTDKFIVRSRHQKKNKR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK0</accession>
    <name>A0A2M9PFK0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GFO_IDH_MocA_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000128">
        <property type="protein sequence ID" value="PJN96330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004104">
        <property type="entry name" value="Gfo/Idh/MocA-like_OxRdtase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02894">
        <property type="entry name" value="GFO_IDH_MocA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GFO_IDH_MocA_C" evidence="1">
        <location>
            <begin position="6"/>
            <end position="217"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="222" mass="24128" checksum="C99F3232442303CD" modified="2018-04-25" version="1">MPARRQSLRSGALGRVLAVNGLWLRRKPDAYYREAWKTDPALGGGVLLINAIHDFDSLRAICGEIDAVQAMTSSAGRGAEVEDTAAVLVRFASGALGTFLISDDVVAPWCWEMTSQEDPRFAWQPENAYVICGTEGSLAVPTLETWTNSPDGGRDATFIRRRLYHVAAESMELQMRHFVRVIRREEEPLVGVDAALGTLAATLAVTLSAERGTAVALDELLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL3</accession>
    <name>A0A2M9PFL3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03250</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000131">
        <property type="protein sequence ID" value="PJN96318.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="169"/>
            <end position="344"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96318.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="348" mass="39094" checksum="87E15388E0F256DF" modified="2018-04-25" version="1">MGRGSTAAAAQPRDAGTKLAQSRLSVLELAKELGNVAEACRQRGLDRTSFYEWKRRFQTQGFDGLKDLPPIHKSHPQTTPEPVVERIKALALEHPAYGCNRHEATLALEGVRVSAITIQKILNDNGLGTRIDRWLALETANVGKTIEITSEQAAFLEKLNPCFRERHVESAAPGELLSADTFFVGSLKGVGKVYLHAVVDTFGSYAFGFLHVSKQPEAAVAVLHNDVLPFYRNLDLPVAAILTDNGREFCGTERHPYELYLDLNGIEHRRTKVRTPRTNGFVERFNGTILDEFFRVKMRETFYDTVEALQADLDAWLVHYNTQRPHLGYRNMGRRPIETVMSFVSQEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV5</accession>
    <name>A0A2M9PFV5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">SURF1-like protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02770</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the SURF1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000108">
        <property type="protein sequence ID" value="PJN96402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="CDD" id="cd06662">
        <property type="entry name" value="SURF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002994">
        <property type="entry name" value="Surf1/Shy1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045214">
        <property type="entry name" value="Surf1/Surf4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23427">
        <property type="entry name" value="PTHR23427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02104">
        <property type="entry name" value="SURF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50895">
        <property type="entry name" value="SURF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="197"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU363076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="223" mass="24524" checksum="5148E01EE362379C" modified="2018-04-25" version="1">MTGRIVAALVFGLGGVAILLALGFWQVRRLEWKQAVLAEISARMEAPAGAVPLDATEARDEYLHVLVSGRLLPGEVHVYTSAPPFGVGYRVIAPLALDDGRTVLIDRGFVPIGEKDAPRLIGPIRVEGALLWPDETDSYTQPPDLAKNIWLARDLPAMAEALRAEPVLIVTRASDDQNAPMPLPVGVNIRNDHLQYAVTWFSLAAVWAMMTGYLIWRIKRRID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW4</accession>
    <name>A0A2M9PFW4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF3576 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_02490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000095">
        <property type="protein sequence ID" value="PJN96447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021959">
        <property type="entry name" value="DUF3576"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12100">
        <property type="entry name" value="DUF3576"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="18099" checksum="B3596A22849D9F26" modified="2018-04-25" version="1">MLALIAACTQTPEQKAAQAETNAQQAVVQSQNQVLGNEYRVTGETSAANSSIFDLFRGNTQPQRQMAVNRYLWTAALDTLSFLPMEGADPFSGVIVTGWGRVGTDPTPFRVTVYISEAALDARSLRVAAFRQQGGRAVPVSSVDNRRLEDAILTRARQLKIASNER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ3</accession>
    <name>A0A2M9PFZ3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8 18">Succinate dehydrogenase flavoprotein subunit</fullName>
            <ecNumber evidence="7 18">1.3.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="21" type="ORF">CNY89_02360</name>
    </gene>
    <organism evidence="21 22">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="21 22" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="21 22">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 18">
            <text>a quinone + succinate = a quinol + fumarate</text>
            <dbReference type="Rhea" id="RHEA:40523"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29806"/>
            <dbReference type="ChEBI" id="CHEBI:30031"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="1.3.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 18">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5 18">Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (bacterial route): step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4 18">Cell inner membrane</location>
            <topology evidence="4 18">Peripheral membrane protein</topology>
            <orientation evidence="4 18">Cytoplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Peripheral membrane protein</topology>
            <orientation evidence="3">Cytoplasmic side</orientation>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6 18">Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="21">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.5.1" evidence="7 18"/>
    <dbReference type="EMBL" id="PHNO01000089">
        <property type="protein sequence ID" value="PJN96470.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223">
        <property type="reaction ID" value="UER01005"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008177">
        <property type="term" value="F:succinate dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022900">
        <property type="term" value="P:electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.700.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003952">
        <property type="entry name" value="FRD_SDH_FAD_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037099">
        <property type="entry name" value="Fum_R/Succ_DH_flav-like_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015939">
        <property type="entry name" value="Fum_Rdtase/Succ_DH_flav-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030664">
        <property type="entry name" value="SdhA/FrdA/AprA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027477">
        <property type="entry name" value="Succ_DH/fumarate_Rdtase_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011281">
        <property type="entry name" value="Succ_DH_flav_su_fwd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014006">
        <property type="entry name" value="Succ_Dhase_FrdA_Gneg"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11632">
        <property type="entry name" value="PTHR11632"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02910">
        <property type="entry name" value="Succ_DH_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46977">
        <property type="entry name" value="SSF46977"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56425">
        <property type="entry name" value="SSF56425"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01816">
        <property type="entry name" value="sdhA_forward"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01812">
        <property type="entry name" value="sdhA_frdA_Gneg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00504">
        <property type="entry name" value="FRD_SDH_FAD_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="18" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="18" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="13 18" id="KW-0249">Electron transport</keyword>
    <keyword evidence="12 18" id="KW-0274">FAD</keyword>
    <keyword evidence="11 18" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="15 18" id="KW-0472">Membrane</keyword>
    <keyword evidence="14 18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="22" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 18" id="KW-0813">Transport</keyword>
    <keyword evidence="10 18" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="FAD_binding_2" evidence="19">
        <location>
            <begin position="12"/>
            <end position="408"/>
        </location>
    </feature>
    <feature type="domain" description="Succ_DH_flav_C" evidence="20">
        <location>
            <begin position="464"/>
            <end position="602"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="16">
        <location>
            <position position="290"/>
        </location>
    </feature>
    <feature type="modified residue" description="Tele-8alpha-FAD histidine" evidence="17">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000030"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004515"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00004894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00008040"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00012792"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00019965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="PIRSR" id="PIRSR611281-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="PIRSR" id="PIRSR611281-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU362051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="Pfam" id="PF00890"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="20">
        <source>
            <dbReference type="Pfam" id="PF02910"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="EMBL" id="PJN96470.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="22">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="602" mass="65338" checksum="2D62B3789E8F7F49" modified="2018-04-25" version="1">MAAYEFIDHTYDVVVVGAGGAGLRATLGMAEQGLKTACVTKVFPTRSHTVAAQGGIAASLGNMGPDSWQWHLYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEDGRIYQRPFGGHTTEYGEGPPVQRTCAAADRTGHAILHTLYGQSLKHNAQFYIEYFAIDLIMAEDGSVQGVLAWKLDDGTLHRFNAKMTVLATGGYGRAYFSATSAHTCTGDGGGMVARQGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTIEIREGRGVGPNKDHIHLHLNHLPPEALAERLPGISESAKIFAGVDLTKAPIPVLPTVHYNMGGIPTNYWGEVLDPTPDNPDRILPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIRAAKVVDPESANRPLNAASVDAAVARFDALRHADGPTPTADLRLAMQKAMQADAAVFRTDKTLAEGVEKVTEIARQMKDIKVTDRSMIWNSDLMETLELTNLMPSALATIVSAEARKESRGAHAHEDWPNRDDENWRKHTLAYVHADDTVTLAYRPVHLDPLTTQDEGGIDLKKIAPKARVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ8</accession>
    <name>A0A2M9PFZ8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">2-oxogl_dehyd_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the alpha-ketoglutarate dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000087">
        <property type="protein sequence ID" value="PJN96475.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032106">
        <property type="entry name" value="2-oxogl_dehyd_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16078">
        <property type="entry name" value="2-oxogl_dehyd_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2-oxogl_dehyd_N" evidence="2">
        <location>
            <begin position="13"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16078"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96475.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6265" checksum="E7EFE3A2D2161D5A" modified="2018-04-25" version="1" fragment="single">MTEQSPNVAFHNSSFLQGQNAVYVEALQARYAEDPASVDAAWQAFFAGLGEAGADSTRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG15</accession>
    <name>A0A2M9PG15_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Cellulose synthase catalytic subunit [UDP-forming]</fullName>
            <ecNumber evidence="7">2.4.1.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">bcsA</name>
        <name evidence="9" type="ORF">CNY89_02285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>[(1-&gt;4)-beta-D-glucosyl](n) + UDP-alpha-D-glucose = [(1-&gt;4)-beta-D-glucosyl](n+1) + H(+) + UDP</text>
            <dbReference type="Rhea" id="RHEA:19929"/>
            <dbReference type="Rhea" id="RHEA-COMP:10033"/>
            <dbReference type="Rhea" id="RHEA-COMP:10034"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18246"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:58885"/>
            <dbReference type="EC" id="2.4.1.12"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="7">Glycan metabolism; bacterial cellulose biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell inner membrane</location>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.12" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000085">
        <property type="protein sequence ID" value="PJN96483.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00694"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016760">
        <property type="term" value="F:cellulose synthase (UDP-forming) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035438">
        <property type="term" value="F:cyclic-di-GMP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030244">
        <property type="term" value="P:cellulose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006011">
        <property type="term" value="P:UDP-glucose metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003919">
        <property type="entry name" value="Cell_synth_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005150">
        <property type="entry name" value="Cellulose_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03552">
        <property type="entry name" value="Cellulose_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01439">
        <property type="entry name" value="CELLSNTHASEA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03030">
        <property type="entry name" value="CelA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0973">c-di-GMP</keyword>
    <keyword evidence="7" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0135">Cellulose biosynthesis</keyword>
    <keyword evidence="2 7" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="89"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="402"/>
            <end position="423"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="435"/>
            <end position="453"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="507"/>
            <end position="530"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="542"/>
            <end position="561"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="8">
        <location>
            <begin position="130"/>
            <end position="318"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU365020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96483.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="633" mass="71027" checksum="0D7066DDA222625D" modified="2018-04-25" version="1">MKFLILLGWATMAACVFLLVTLPVSSEAQLAASVTALGAMTLLKRFRPDGAWRLIALAFGTAIVMRYVYWRTTSTLPSPSELQNYIPALMLYAAEMYSVMMLALSLFVVAKPLRPRVAPKLADADLPFVDVFIPTYNEEPHLLVNTLAAAQAMDYPADRFEVWLLDDGGTDQKRNSDRLLEATAAERRHEALTRICAQFGARYLTRARNEHAKAGNLNNGLSHTSGELVAVFDADHAPARDFLRETVGFFREDPKIFLVQTPHFFLNPDPLERNLGTFETMPSENEMFYGVIQRGLDKWNASFFCGSAAVLSRKALDTTGGFQGVSITEDCETAIELHSKGWKSVYVDKPLIAGLQPATFASFIGQRSRWAQGMMQILMLRSPLIKRGLSPAQRLCYMSSTLYWMFPFPRTMFLIAPLFYLIFGLEIFTASGGEFLAYTLTYMIANMLMQNYLYGDFRWPWISELYEYVQSVHLLRAVVSVMLHPRKPTFKVTAKDESVARSRLSELSWPFFAIFALLSVGVALTVWRFVAEPYKADVTLVVGGWNLLNLIIAGCALGVIAEKGQRRAISRRVTVNRRCEFGLGGAWFPGTIEDVSVSGARVHADGCSLRLWRRAVDSRLRATWKPQPLTMSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG27</accession>
    <name>A0A2M9PG27_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Succinate dehydrogenase cytochrome b556 subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">sdhC</name>
        <name evidence="15" type="ORF">CNY89_02370</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Membrane-anchoring subunit of succinate dehydrogenase (SDH).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="13">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
        <text evidence="13">The heme is bound between the two transmembrane subunits.</text>
    </comment>
    <comment type="subunit">
        <text evidence="12">Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD. The complex can form homotrimers.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the cytochrome b560 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000089">
        <property type="protein sequence ID" value="PJN96472.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045281">
        <property type="term" value="C:succinate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000104">
        <property type="term" value="F:succinate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018495">
        <property type="entry name" value="Succ_DH_cyt_bsu_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014314">
        <property type="entry name" value="Succ_DH_cytb556"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000701">
        <property type="entry name" value="SuccDH_FuR_B_TM-su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10978">
        <property type="entry name" value="PTHR10978"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01127">
        <property type="entry name" value="Sdh_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000178">
        <property type="entry name" value="SDH_cyt_b560"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="SSF81343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02970">
        <property type="entry name" value="succ_dehyd_cytB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01001">
        <property type="entry name" value="SDH_CYT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5 13" id="KW-0349">Heme</keyword>
    <keyword evidence="10 13" id="KW-0408">Iron</keyword>
    <keyword evidence="11 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="7 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 14" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="30"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="70"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="binding site" description="axial binding residue" evidence="13">
        <location>
            <position position="86"/>
        </location>
        <ligand>
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
            <note>ligand shared with second transmembrane subunit</note>
        </ligand>
        <ligandPart>
            <name>Fe</name>
            <dbReference type="ChEBI" id="CHEBI:18248"/>
        </ligandPart>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007244"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020076"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00025912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="PIRSR" id="PIRSR000178-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN96472.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14145" checksum="18B833D4919B2FA8" modified="2018-04-25" version="1">MADVNRGNRPLSPFMIGQVYRPQITSVLSIMHRITGVGLTLAAVLTVWWFLAASADAEAFAFADGIITSWIGGLILILSLLAFWFHFCNGVRHLFWDAGYGFQLESVRKSGLGVLAGAVVLTVITMIVAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG65</accession>
    <name>A0A2M9PG65_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Carbohydrate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000070">
        <property type="protein sequence ID" value="PJN96540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0418">Kinase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7444" checksum="CA3D94096DE64F0E" modified="2018-04-25" version="1" fragment="single">MTVTAVLDIGKTNVKLYAVGPDGVPLETLSTPNASLDGPPWRHHDLAGIEAWLLAALTDLASRHDIDAIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG78</accession>
    <name>A0A2M9PG78_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01880</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000068">
        <property type="protein sequence ID" value="PJN96553.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="18"/>
            <end position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96553.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="30838" checksum="3C85B921503D8834" modified="2018-04-25" version="1">MGGGLRLAWREWGEGPIPVLFIHGNLASKDWIELAARWFPEDLRVIGVDWRGCGDSDKPAAEPGYANYTMAQHAADMRAALDGLGIERCHLATHSTGGMIAAHMQLADPDRYGRCLALDPVTPLGLKFDETSIAIFRAMQASREVTRAGMATAAASLFVADSLLPGATPRFREGVGELQAFFERIIDQTFRVAEGIWFGTPHNLNIEYESGDVARRMPELTHEHLVLWGELDGWIPAADVRRMAAEMPNCRLVTAPGIGHSMNLENPALYAGYLGGFLGGVPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG81</accession>
    <name>A0A2M9PG81_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Molybdenum cofactor biosysynthesis protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000071">
        <property type="protein sequence ID" value="PJN96536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030151">
        <property type="term" value="F:molybdenum ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005302">
        <property type="entry name" value="MoCF_Sase_C"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51340">
        <property type="entry name" value="MOSC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MOSC" evidence="1">
        <location>
            <begin position="1"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="4573" checksum="77A5F855206B5346" modified="2018-04-25" version="1" fragment="single">AANPDTGVIDADTLGALRAGWGAQEFGVYAEVIAGGRVTLGDRLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI9</accession>
    <name>A0A2M9PGI9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01240</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000042">
        <property type="protein sequence ID" value="PJN96658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="11"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="269"/>
            <end position="513"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="43"/>
            <end position="50"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="514" mass="55765" checksum="641277E3E65D7994" modified="2018-04-25" version="1">MSQAIPDQPILEMRGITKTFPGVKALSNVNLSVARGEIHAICGENGAGKSTLMKVLSGVYPHGTYEGDILYEGQPMAFGGIRDSEDKGIIIIHQELALVPLLSIAENIFLGNEVASGGVIDWPETYQRTAGLLAKVGLKEPPATPVEKLGVGKQQLVEIAKALSKEVRLLILDEPTASLQENDSEKLLDLLMEFRAQGISSILISHKLNEIRKVADSVTILRDGATVSTLRVAGGQVSEDLIIRDMVGRDMAHRYPPRDPNPGARLMEVEGWNLWHPEHAARQIIRDVSFHVAEGEVVGIAGLMGSGRTELAMSVFGRSYGQGAQGVVRLRGKEVDTSTVNAAIRSGLAYVTEDRKGLGLLLEESVLRNATLSALEKVSTRGVVDSAEERQVAEGFREALRIRTPSVFQQVMNLSGGNQQKVVLAKWLFTDPEVLILDEPTRGIDVGAKFEIYGIINKLVAEGRGVVMISSEMPELLGMCDRIYVMREGAFVGELARADASQERIMSMIVQDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="20" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL8</accession>
    <name>A0A2M9PGL8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 17">Ubiquinol-cytochrome c reductase iron-sulfur subunit</fullName>
            <ecNumber evidence="5 17">7.1.1.8</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="20" type="primary">petA</name>
        <name evidence="20" type="ORF">CNY89_01005</name>
    </gene>
    <organism evidence="20 21">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="20 21" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="20 21">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="16 17">
            <text>a quinol + 2 Fe(III)-[cytochrome c](out) = a quinone + 2 Fe(II)-[cytochrome c](out) + 2 H(+)(out)</text>
            <dbReference type="Rhea" id="RHEA:11484"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
            <dbReference type="EC" id="7.1.1.8"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="17">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
        <text evidence="17">Binds 1 [2Fe-2S] cluster per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4 18">The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="miscellaneous">
        <text evidence="17">The Rieske protein is a high potential 2Fe-2S protein.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Rieske iron-sulfur protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="20">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.8" evidence="5 17"/>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96693.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008121">
        <property type="term" value="F:ubiquinol-cytochrome-c reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.102.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017941">
        <property type="entry name" value="Rieske_2Fe-2S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036922">
        <property type="entry name" value="Rieske_2Fe-2S_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014349">
        <property type="entry name" value="Rieske_Fe-S_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005805">
        <property type="entry name" value="Rieske_Fe-S_prot_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019546">
        <property type="entry name" value="TAT_signal_bac_arc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019470">
        <property type="entry name" value="Ubiq_cytC_Rdtase_Fe-S_su_TAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006317">
        <property type="entry name" value="Ubiquinol_cyt_c_Rdtase_Fe-S-su"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10134">
        <property type="entry name" value="PTHR10134"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00355">
        <property type="entry name" value="Rieske"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10399">
        <property type="entry name" value="UCR_Fe-S_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00162">
        <property type="entry name" value="RIESKE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50022">
        <property type="entry name" value="SSF50022"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01416">
        <property type="entry name" value="Rieske_proteo"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01409">
        <property type="entry name" value="TAT_signal_seq"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51296">
        <property type="entry name" value="RIESKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="15" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="17" id="KW-0249">Electron transport</keyword>
    <keyword evidence="12" id="KW-0408">Iron</keyword>
    <keyword evidence="13" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="14 17" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="21" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 17" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="11 17" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="17" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="17">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="domain" description="Rieske" evidence="19">
        <location>
            <begin position="89"/>
            <end position="184"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002444"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011649"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012951"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00019816"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="ARBA" id="ARBA00029351"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="17">
        <source>
            <dbReference type="RuleBase" id="RU004494"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="18">
        <source>
            <dbReference type="RuleBase" id="RU004497"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="19">
        <source>
            <dbReference type="PROSITE" id="PS51296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="20">
        <source>
            <dbReference type="EMBL" id="PJN96693.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="21">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="186" mass="19683" checksum="BC8E8951FDEDD97D" modified="2018-04-25" version="1">MAHVEEHSASRRDFLYVATGAAGAVVAGAAIWPLVNQMNPSADVQALASIRVDVSAIPEGSQITVKFLGKPVFIRNRTPENIAMAEEVPLDQLVDPIARNANIAADAPATDANRAFSTDPKWLVMMGVCTHLGCVPLADAGDFGGWFCPCHGSHYDSAGRIRKGPAPQNLPVPVASFVEDNILQLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM6</accession>
    <name>A0A2M9PGM6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA polymerase I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_01035</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96699.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017108">
        <property type="term" value="F:5'-flap endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033567">
        <property type="term" value="P:DNA replication, Okazaki fragment processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd09898">
        <property type="entry name" value="H3TH_53EXO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020046">
        <property type="entry name" value="5-3_exonucl_a-hlix_arch_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002421">
        <property type="entry name" value="5-3_exonuclease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036279">
        <property type="entry name" value="5-3_exonuclease_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020045">
        <property type="entry name" value="DNA_polI_H3TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038969">
        <property type="entry name" value="FEN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008918">
        <property type="entry name" value="HhH2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029060">
        <property type="entry name" value="PIN-like_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42646">
        <property type="entry name" value="PTHR42646"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01367">
        <property type="entry name" value="5_3_exonuc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02739">
        <property type="entry name" value="5_3_exonuc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00475">
        <property type="entry name" value="53EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00279">
        <property type="entry name" value="HhH2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47807">
        <property type="entry name" value="SSF47807"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88723">
        <property type="entry name" value="SSF88723"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="53EXOc" evidence="2">
        <location>
            <begin position="11"/>
            <end position="271"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="314"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96699.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="34143" checksum="FEEB309BC7BA1F40" modified="2018-04-25" version="1" fragment="single">MAADAPFGPGSHLHLIDGSGFIFRAYHALPPLTRKSDGMPIGAVAGFCNMVWKMVAEERGSDAPTHLAVIFDHSSKTFRNDLYPLYKAQRPEPPEDLRPQFGLIREATRAFNLPCIEMEGYEADDIIATYACMAREMGGRVTIVSADKDLMQLVSPGVEMYDTLKAKRIGPDEVFEKFGVAPDRVVDVQSLAGDSVDNVPGAPGIGIKTAAALIQEYGDLDTLLARASEIKQPKRRETLTVFADQIRISRDLVTLKCDTPVEEPLEALEVRVSNPGMLLDFLGQMEFRTLTARIAAKFGVDAPGPAPVVAAARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR1</accession>
    <name>A0A2M9PGR1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phosphate ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_00865</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000028">
        <property type="protein sequence ID" value="PJN96726.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015415">
        <property type="term" value="F:ATPase-coupled phosphate ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005315">
        <property type="term" value="F:inorganic phosphate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03260">
        <property type="entry name" value="ABC_PstB_phosphate_transporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015850">
        <property type="entry name" value="ABC_transpr_PstB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005670">
        <property type="entry name" value="Phosp_transpt1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423">
        <property type="entry name" value="PTHR43423"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43423:SF3">
        <property type="entry name" value="PTHR43423:SF3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00972">
        <property type="entry name" value="3a0107s01c2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="ABC transporter" evidence="5">
        <location>
            <begin position="36"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="68"/>
            <end position="75"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96726.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="30951" checksum="22F4FBA2D1718167" modified="2018-04-25" version="1">MQTEVKKMSAIVTEALAKPMTPSTAPAAAAASAPKVSARNVTVHYGEKQALFGVDIDIPANTVTSFIGPSGCGKSTFLRCLNRMNDTIAICKVAGDITLDKTNIYDPRIDVVELRARIGMVFQKPNPFPKSIYENVAYGPRIHGMTRSKAELDEIVHGSLRRAGLWNEVKDRLNETGTGLSGGQQQRLCIARAIATQPEVLLMDEPCSALDPIATAIVEELIDELRSNYTIIIVTHSMQQAARVSQRTAFFHLGKLIEEGRTEDIFSNPRHKQTEAYITGKIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ2</accession>
    <name>A0A2M9PGZ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">C4-dicarboxylate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00410</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000012">
        <property type="protein sequence ID" value="PJN96803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00786">
        <property type="entry name" value="dctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="7"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="42"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="73"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="134"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="171"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="206"/>
            <end position="229"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="235"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="269"/>
            <end position="294"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="314"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="400"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="7"/>
            <end position="417"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="426" mass="44914" checksum="79D90EE6B7807BB5" modified="2018-04-25" version="1">MDYAILFGVFTVLMLIGTPIAFCLGIASFATVLHLGLPPLVVFQRVASGVSVFTLLAIPFFIFAGDIMVRGGIAARIVAFAGSLIGHVRGGLGQVNIAASTLFGGISGSAVAEAAAVGGIMIPQMKARGYGADYAVNVTSMAALIALMLPPSHNMIIYAISGGGRISIADLFTAGILPGLLLALALSITAYIVARHRGYPTEPFPGFARVLNMFVLSLPGLLLIAIIFGGVRSGIFTATESSCVAVLYALLVTLTVYRTMSWSEFVHTVLAAVRTTSMVLLIIGMAGAFGWLMAYLRVASTVVAMMGEMSQNPLVILLMINVILLILGTFMDMSPLIIITTPVFLPVVTAFGVDPVHFGVIMILNLGIGLNTPPLGPVQFVAAAVGRITIWEAMRSIWPFYGAGLLVLMMVTYIPALSLWLPAQFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ5</accession>
    <name>A0A2M9PGZ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000013">
        <property type="protein sequence ID" value="PJN96801.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="27"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="108"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96801.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="11831" checksum="A9963017714F5C6D" modified="2018-04-25" version="1">MAGIAFLAWGVGARLGGRGDALGAVRIVVWLNIVTLVIQAFQLVAIVFAPPLASFMAIATLLWLFWAFANFTAELHDFASPFIVLGVTVLTAVGLVLGLALIATLLGVSPEGAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH27</accession>
    <name>A0A2M9PH27_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="10">Glutathione synthetase</fullName>
            <ecNumber evidence="10">6.3.2.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="10">GSH synthetase</fullName>
            <shortName evidence="10">GSH-S</shortName>
            <shortName evidence="10">GSHase</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="10">Glutathione synthase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="10" type="primary">gshB</name>
        <name evidence="13" type="ORF">CNY89_00350</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="10">
            <text>ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + glutathione + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13557"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:57925"/>
            <dbReference type="ChEBI" id="CHEBI:58173"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.3"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="10">Sulfur metabolism; glutathione biosynthesis; glutathione from L-cysteine and L-glutamate: step 2/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="10">Belongs to the prokaryotic GSH synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.3" evidence="10"/>
    <dbReference type="EMBL" id="PHNO01000009">
        <property type="protein sequence ID" value="PJN96822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00142">
        <property type="reaction ID" value="UER00210"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004363">
        <property type="term" value="F:glutathione synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00162">
        <property type="entry name" value="GSH_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006284">
        <property type="entry name" value="Glut_synth_pro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004218">
        <property type="entry name" value="GSHS_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004215">
        <property type="entry name" value="GSHS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21621:SF4">
        <property type="entry name" value="PTHR21621:SF4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02955">
        <property type="entry name" value="GSH-S_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02951">
        <property type="entry name" value="GSH-S_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01380">
        <property type="entry name" value="glut_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 10 11" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 10" id="KW-0317">Glutathione biosynthesis</keyword>
    <keyword evidence="3 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="8" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0464">Manganese</keyword>
    <keyword evidence="5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 10 11" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATP-grasp" evidence="12">
        <location>
            <begin position="125"/>
            <end position="309"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022684"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00162"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="314" mass="34841" checksum="E3B291CD7E2E5262" modified="2018-04-25" version="1">MGLSVAVQMDPIASINIDADSTFRIMEEAQARGHSLFYYTPGRLAFDEGRVTARGWPVEVRRVKGDHFTLGPETEVDLGDFDVVWLRQDPPFDMGYITTTHVLDMLAGRTLVVNDPFWVRNYPEKLLVLRFPELTPPTAVARDLATLKAFKARHGDIILKPLYGNGGAGVFRLDPNDRNFTALWELFTGINREPLIAQKFLSDVSQGDKRIILVDGEPVGAINRMPAEGETRSNMHAGGTPVPTQLTDREREICAAIGPLLREKGQIFVGIDVIGGWLTEINVTSPTGLQELERFDGINATAKIWEAIERRCAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4E3</accession>
    <name>A0A2M9P4E3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004684">
        <property type="protein sequence ID" value="PJN92395.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003937">
        <property type="term" value="F:IMP cyclohydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004643">
        <property type="term" value="F:phosphoribosylaminoimidazolecarboxamide formyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006164">
        <property type="term" value="P:purine nucleotide biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.140.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024051">
        <property type="entry name" value="AICAR_Tfase_dup_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016193">
        <property type="entry name" value="Cytidine_deaminase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002695">
        <property type="entry name" value="PurH-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01808">
        <property type="entry name" value="AICARFT_IMPCHas"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53927">
        <property type="entry name" value="SSF53927"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92395.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="3053" checksum="78DB9F8EE8E05C9A" modified="2018-04-25" version="1" fragment="single">MVIVKHANPCGVARSDTLEDAYRAAFDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G8</accession>
    <name>A0A2M9P4G8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004619">
        <property type="protein sequence ID" value="PJN92413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7921" checksum="0E6512796B266233" modified="2018-04-25" version="1" fragment="single">TPFTLLFLFVLFLLHPMLGLVASLGAVVILTAIWLSRLAETPFTLLFLFVLFLLHPMLGLVASLGAVVILTAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H4</accession>
    <name>A0A2M9P4H4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Molybdate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004560">
        <property type="protein sequence ID" value="PJN92430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="41" mass="4662" checksum="955285E185260610" modified="2018-04-25" version="1" fragment="single">IVPEALHAPIRQDAVLLEPGRDSAAARAFLDFRQVRRRHGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q4</accession>
    <name>A0A2M9P4Q4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28805</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004192">
        <property type="protein sequence ID" value="PJN92541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="21"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="51"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9275" checksum="F2BA801A520690C8" modified="2018-04-25" version="1" fragment="single">LVFLGIAWRSLAVLVNNGADGAVFSIALMIDLGLGYAVGRAFIRKASDFRFFFRCFLLLLLAFLPFAVLEFVTLQRILLDIFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X2</accession>
    <name>A0A2M9P4X2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Biotin carboxylation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_28670</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004143">
        <property type="protein sequence ID" value="PJN92558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="5">
        <location>
            <begin position="1"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="33"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="56"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8242" checksum="259F79853509F68C" modified="2018-04-25" version="1" fragment="single">AEAVHPGYGFLSENPEFVDAVEAAGLTFIGPSAAARATSTAPASSARRWRRGRRPSTRATASSPRTPSSWTRSRRRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y0</accession>
    <name>A0A2M9P4Y0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28535</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004097">
        <property type="protein sequence ID" value="PJN92573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8467" checksum="7E9C4C7D7812216E" modified="2018-04-25" version="1" fragment="single">RRRMEAGEFNTVTDLAKAVGLAERHVSRQLRLAYLAPGVLKRLVYKREVPAVTLLKLTDVAALPWHEQPERVFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P523</accession>
    <name>A0A2M9P523_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28120</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003958">
        <property type="protein sequence ID" value="PJN92620.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92620.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9573" checksum="7350EDED6C54A93E" modified="2018-04-25" version="1" fragment="single">AAKGTFEAVKARGLEAFRAALRPLLPFADARAEGRFEAGRIFVMLNRGAYWQCAYVAAKGTFEAVKARGLEAFRAALRPLLPFADARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E4</accession>
    <name>A0A2M9P5E4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Quinolinate synthase</fullName>
            <ecNumber evidence="3">2.5.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_26755</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; NAD(+) biosynthesis; quinolinate from iminoaspartate: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.72" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01003525">
        <property type="protein sequence ID" value="PJN92771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00253">
        <property type="reaction ID" value="UER00327"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008987">
        <property type="term" value="F:quinolinate synthetase A activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009435">
        <property type="term" value="P:NAD biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10800">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003473">
        <property type="entry name" value="NadA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036094">
        <property type="entry name" value="NadA_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02445">
        <property type="entry name" value="NadA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142754">
        <property type="entry name" value="SSF142754"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="8" id="KW-0408">Iron</keyword>
    <keyword evidence="9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5" id="KW-0662">Pyridine nucleotide biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN92771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9556" checksum="486D307D83FD7C83" modified="2018-04-25" version="1" fragment="single">VAKHRPAKAMLVTECSMASNISDALPDVEFAKPCNMCPYMKKITLEKVLYSLHTGLGEVTVDPQVSARARLAVERMIEISRRPAKAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5K9</accession>
    <name>A0A2M9P5K9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PriCT_1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26385</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003419">
        <property type="protein sequence ID" value="PJN92805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014820">
        <property type="entry name" value="PriCT_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08708">
        <property type="entry name" value="PriCT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PriCT_1" evidence="1">
        <location>
            <begin position="2"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="12225" checksum="C3B979055D409B54" modified="2018-04-25" version="1" fragment="single">VRSGERNDTLWRWTMAQARYCDDVDQLVDARAGWAAFPDPLSSQEVEKCARSAWAYETSGRNYLGLRRPQLTEKDVAMDVLRDSPDAFYLLSLFERFHRNKAAFF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5T6</accession>
    <name>A0A2M9P5T6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003126">
        <property type="protein sequence ID" value="PJN92906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="35"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3471" checksum="C2161FFC08F1E56B" modified="2018-04-25" version="1" fragment="single">MGVSIAAITVVLTVVIGTIVGVISGRKGGFVDDLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5W0</accession>
    <name>A0A2M9P5W0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003087">
        <property type="protein sequence ID" value="PJN92926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="4"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12869" checksum="280451C4CBFFEACE" modified="2018-04-25" version="1" fragment="single">MFNELYRDGNTSDAVRHKNILVEDNYIRNANTHGVTVTHADGVTVRGNTVTLNGDQGLTQIPLVNVSALSRNVEIIGNTVSSVQDSLGDSWIVYGNDVSARSRFHWDGVFVNGVLQSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P609</accession>
    <name>A0A2M9P609_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002949">
        <property type="protein sequence ID" value="PJN92976.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92976.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8153" checksum="0444B303C76C5757" modified="2018-04-25" version="1">MCTSLVYRDAAGRAYFGRTLELTVDLPYLMTWFPAGFAASSQVAGHPALGFTTANAVLAVTMPIRVPAKGSRSTCPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P622</accession>
    <name>A0A2M9P622_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_16780</name>
        <name evidence="3" type="ORF">CNY89_24630</name>
    </gene>
    <organism evidence="3 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002883">
        <property type="protein sequence ID" value="PJN93004.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001237">
        <property type="protein sequence ID" value="PJN94052.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="2">
        <location>
            <begin position="10"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93004.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94052.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="9153" checksum="FC13DC1D634592AB" modified="2018-04-25" version="1" fragment="single">MTTAIHPGALRHSRDRKRWTQEQLAEATKGKNKVSLPTIKRIESTKDGTYPANDRVAEGLAKALGVTLDELSKPPTDEAEREA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P628</accession>
    <name>A0A2M9P628_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Replication initiation protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24775</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002927">
        <property type="protein sequence ID" value="PJN92987.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006270">
        <property type="term" value="P:DNA replication initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000525">
        <property type="entry name" value="Initiator_Rep_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01051">
        <property type="entry name" value="Rep_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Rep_3" evidence="1">
        <location>
            <begin position="9"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92987.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="14088" checksum="D9657299924EC008" modified="2018-04-25" version="1" fragment="single">QESQTYAVMNRQAVLGFRSAYALKLYEEGALRLHRRLPVWKVDVVGLRAALGVDPEKYADFAQLRRKVLAVAKAEIDQLAHFTVEWQEVRRGRAVTELEFRFAPKDAPAQLATVEEVGRHSVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F2</accession>
    <name>A0A2M9P6F2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002492">
        <property type="protein sequence ID" value="PJN93144.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="9"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93144.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15864" checksum="5B04B00598652487" modified="2018-04-25" version="1" fragment="single">EAADQLRCEIEHVDGTFNAKRRGVLLDWLKSEAGENVCRILTNARCLSEGVDVPALDAIMFLHPRKSQIDVVQSVGRVMRRAEGKKMGYVILPVGVPRRSAAGTGPERQRKYRVVWQILNALRAHDDRFDATINKASLGQDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G8</accession>
    <name>A0A2M9P6G8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002496">
        <property type="protein sequence ID" value="PJN93142.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005183">
        <property type="entry name" value="DUF305"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012347">
        <property type="entry name" value="Ferritin-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03713">
        <property type="entry name" value="DUF305"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF305" evidence="1">
        <location>
            <begin position="10"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03713"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93142.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6585" checksum="4B1039118D5A54CF" modified="2018-04-25" version="1" fragment="single">MRRMMISMPAMHEGMMNEDADVAFACGMIAHHQGAIDMAQVLLEHGDDPEMIELAGEIIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J3</accession>
    <name>A0A2M9P6J3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">TrwB_AAD_bind domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002533">
        <property type="protein sequence ID" value="PJN93129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019476">
        <property type="entry name" value="T4SS_TraD_DNA-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10412">
        <property type="entry name" value="TrwB_AAD_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TrwB_AAD_bind" evidence="1">
        <location>
            <begin position="2"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10412"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="13864" checksum="C6A42FDC570286D8" modified="2018-04-25" version="1" fragment="single">MVKTSADLNTLANGLIMRSEHEKDPHWNNCAQILLKGVIALVLSSARPSERNLITVVNFLNDLQDVTPAEKPTPLFIDPKAAPRPNIPKGATVADMAKAALYNCRAFGGVARKATAMLAKTGESSSFFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6M1</accession>
    <name>A0A2M9P6M1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22810</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002380">
        <property type="protein sequence ID" value="PJN93192.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="45"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93192.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="16130" checksum="748E4DF0CAB3C823" modified="2018-04-25" version="1" fragment="single">FQTLDERARAAQLVPGSPEYSDFMLNGGVQRTQAIPTFRPATAQEAQQYGSPAGQIDEATGRFYPAESKDTTTEGERKAAGYLGRMEAAGQSIDQAPADGQRINHVQDWLSWVGVTDGPVGIVEHPDVRRMLMSMKSRIEAMRGLLY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S6</accession>
    <name>A0A2M9P6S6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ferrochelatase</fullName>
            <ecNumber evidence="2">4.99.1.1</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="primary">hemH</name>
        <name evidence="2" type="ORF">CNY89_22125</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.99.1.1" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01002213">
        <property type="protein sequence ID" value="PJN93274.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004325">
        <property type="term" value="F:ferrochelatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93274.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="54" mass="5735" checksum="B235A5CC80887137" modified="2018-04-25" version="1" fragment="single">MNQLAPLPVPGVPDLPGEGRLTFAPQDHPPVPRAKIGVIVSNLGTPDATDYWSM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6W8</accession>
    <name>A0A2M9P6W8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Restriction endonuclease subunit M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_22365</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002268">
        <property type="protein sequence ID" value="PJN93250.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002295">
        <property type="entry name" value="N4/N6-MTase_EcoPI_Mod-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00506">
        <property type="entry name" value="D21N6MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="48"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="154"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93250.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="154" mass="17230" checksum="69143F3C069744CB" modified="2018-04-25" version="1" fragment="single">AKPNLGQKERAREYQYVDAASGRRYMKVPVHAPGVRNGETGKPWRGMMPPPGKHWQFTPATLDELDAKGDIFWSKNGNPRRKVYLDESAGVSVQDIWMDYRDAHNQMVHVTGYPTEKNINLLRRIVEASSNPGDIVLDCFCGSGTALVAADMLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P776</accession>
    <name>A0A2M9P776_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001975">
        <property type="protein sequence ID" value="PJN93393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="55"/>
            <end position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8327" checksum="6548E95DCC16B948" modified="2018-04-25" version="1">MWTMAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTTGGTGSAARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C9</accession>
    <name>A0A2M9P7C9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001938">
        <property type="protein sequence ID" value="PJN93419.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93419.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="19846" checksum="AE293354F895C5D0" modified="2018-04-25" version="1" fragment="single">EIEKLSYDLGGIAHVVVEPDRAFSFQLRDETEGRNAYGGTIGLSVPGQGIVRRYYLGWQIQDGRELATAIVAAASSLRSQMPAFGWDWTELQEQALRVQREREKDSLTEAEWNQLHQEQIDNLHDRIRELEQQFSAIPAASLGTDEAEFSTDNLVQRVGPEVYSGEISDRLRLAAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7F9</accession>
    <name>A0A2M9P7F9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Restriction endonuclease subunit M</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20720</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001883">
        <property type="protein sequence ID" value="PJN93448.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="1"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93448.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="13884" checksum="59DCA74473C73295" modified="2018-04-25" version="1" fragment="single">LRRIVEASSNPGDIVLDCFCGSGTALVAADMLERKWIGVDNSPEALRTMLGRFEHGTKPMGDFVGKQTPKREAASGSLFDVELPKVPTMPPHRIEDFALFVAPDLLPHIRPVLFVGRGGGIGGIFRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G2</accession>
    <name>A0A2M9P7G2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001803">
        <property type="protein sequence ID" value="PJN93504.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038766">
        <property type="entry name" value="Membrane_comp_ABC_pdt"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30287">
        <property type="entry name" value="PTHR30287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93504.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="185" mass="20173" checksum="252EBA3D2C2B930F" modified="2018-04-25" version="1" fragment="single">LFFSKNHARAVVAGWIGDFNTAQPHSAIGYMRRNLITADLPERAPAFFFVDIQPDQLPGFVQIVDDTPGVEGIETAPMLRGIISRINGRPAREVAPGHWAVRGDRGITYAAAPPEGTKILAGEWWPEDYDGPPLVSFAAEEAAEIGLELGDKLTLNVLGRITTVRPWSASPRRRRRRSGSSSATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T9</accession>
    <name>A0A2M9P7T9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19855</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001706">
        <property type="protein sequence ID" value="PJN93570.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93570.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7588" checksum="9BF07623409CDC59" modified="2018-04-25" version="1" fragment="single">MRVAKLDEDQSADAAAWPKVLAASAAKMAAGRSVRPRQQAIHLLALRFAAARAKLRLPCDPVRANCARAHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Z3</accession>
    <name>A0A2M9P7Z3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_19380</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001611">
        <property type="protein sequence ID" value="PJN93643.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93643.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14584" checksum="DC6451EEC2427DC9" modified="2018-04-25" version="1">MSPRPPRRPGTRSRPSTRTGAGNTPRIAQAWRRAWQEVIPFFAFSPEIRRVIYTTNAIESLNRIIRKAIKTRGSFPSEDAAENADLPGNPGSRKNAHVEGFLKQLLLGLACLGMEERKVAGIRWREVCSD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P830</accession>
    <name>A0A2M9P830_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_19120</name>
        <name evidence="8" type="ORF">CNY89_21820</name>
        <name evidence="7" type="ORF">CNY89_22760</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002368">
        <property type="protein sequence ID" value="PJN93197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002129">
        <property type="protein sequence ID" value="PJN93307.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001562">
        <property type="protein sequence ID" value="PJN93683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93307.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10716" checksum="7BCDAE9E9FFACE66" modified="2018-04-25" version="1" fragment="single">AEEDVLAYMTFPSQHRVKLHSTNPLERLNKEVKRRADVVGIFPNEDSIVRLIGAVLLEQNDEWQLQHRYMQIEGMVELDASAEASPSLIAEADAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P862</accession>
    <name>A0A2M9P862_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001499">
        <property type="protein sequence ID" value="PJN93737.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93737.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10456" checksum="F67AA255AECA7E1F" modified="2018-04-25" version="1">MLDLDYRTVEKHEIGACRHFSQNHPISACLPPQQGAEFVFAWGHKPCGGELQHLPIACAAKTDSRHVRAVEHIRFLHALEKARGQPDPKPSTAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E2</accession>
    <name>A0A2M9P8E2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS1380 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18225</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001425">
        <property type="protein sequence ID" value="PJN93817.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025668">
        <property type="entry name" value="Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13701">
        <property type="entry name" value="DDE_Tnp_1_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tnp_DDE_dom" evidence="1">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13701"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93817.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9276" checksum="27F445BD7E5209B8" modified="2018-04-25" version="1" fragment="single">RTSAATMRANQLRLWFASMAYALLTALRRIGLAGTELATATCGSIRLKLLKIGALVTRSVRRIRIAMASSCPDAAAFRIAHARLCS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E4</accession>
    <name>A0A2M9P8E4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">PAS domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001445">
        <property type="protein sequence ID" value="PJN93798.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009922">
        <property type="entry name" value="DUF1457"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07310">
        <property type="entry name" value="PAS_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93798.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="15221" checksum="03CDF00383FCAFAF" modified="2018-04-25" version="1" fragment="single">MNDLVLSSLRTYWERLRAGRIAPYRAEIDPRQFEGALENMFIVERVSPDNMRIRLAGMKICEMMGMEVRGMEPGFLVDAADRLRFDRLLGVVMSEPAVVDLALSTGGRQRAAMLLMPLRSDFGEINRVLGCACGPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I4</accession>
    <name>A0A2M9P8I4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF1989 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001414">
        <property type="protein sequence ID" value="PJN93833.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018959">
        <property type="entry name" value="DUF1989"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09347">
        <property type="entry name" value="DUF1989"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF1989" evidence="1">
        <location>
            <begin position="7"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09347"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93833.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="15047" checksum="260A49E20F7FCB1A" modified="2018-04-25" version="1">MERIFDIPAEKPWSGVVRKGQTLRIVDTYGQQAIDTIFYAAADFGERYSNQDTVRLNGAAYVGQGTRIVSSEGRVMLTVTAASSGRHDTSAGCCSCESNTVRFGVETQYLHACRENFIVELARHDMGKRDTIEGFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8J8</accession>
    <name>A0A2M9P8J8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001397">
        <property type="protein sequence ID" value="PJN93854.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93854.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17408" checksum="BDCDA71F87B2A140" modified="2018-04-25" version="1" fragment="single">MPTRDCAQHTVTLNGDQGLTQTPLINVSGTSQNVEIIGNRVYSVQDSLGDSWIVYGNDVDSLSRFHWDGVYVNGVLQPQVRPTAQDPSLSDRYLVDRSAFDGATPLVIDDIDFAKGDRIVLTGFKAGTFIRPALDQTFEIWNNGGAATLNSFSDLDKIE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M4</accession>
    <name>A0A2M9P8M4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">N-formylglutamate amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17745</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001366">
        <property type="protein sequence ID" value="PJN93897.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007709">
        <property type="entry name" value="N-FG_amidohydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05013">
        <property type="entry name" value="FGase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93897.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7633" checksum="E967D70F9B26A2A0" modified="2018-04-25" version="1" fragment="single">MPDPIPDPVYELTLPDAPLSCAVFSSPHSGRDYAKAYMGETRLAPQALRSSEDAFVDELFAAGPRAGAPLLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q6</accession>
    <name>A0A2M9P8Q6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">50S ribosomal protein L11</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 10" type="primary">rplK</name>
        <name evidence="10" type="ORF">CNY89_17555</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 7">Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.</text>
    </comment>
    <comment type="PTM">
        <text evidence="5 7">One or more lysine residues are methylated.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uL11 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001339">
        <property type="protein sequence ID" value="PJN93922.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070180">
        <property type="term" value="F:large ribosomal subunit rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00349">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00736">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000911">
        <property type="entry name" value="Ribosomal_L11/L12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036796">
        <property type="entry name" value="Ribosomal_L11/L12_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006519">
        <property type="entry name" value="Ribosomal_L11_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020783">
        <property type="entry name" value="Ribosomal_L11_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036769">
        <property type="entry name" value="Ribosomal_L11_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020784">
        <property type="entry name" value="Ribosomal_L11_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11661">
        <property type="entry name" value="PTHR11661"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00298">
        <property type="entry name" value="Ribosomal_L11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03946">
        <property type="entry name" value="Ribosomal_L11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00649">
        <property type="entry name" value="RL11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46906">
        <property type="entry name" value="SSF46906"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54747">
        <property type="entry name" value="SSF54747"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01632">
        <property type="entry name" value="L11_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5 7" id="KW-0488">Methylation</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L11_N" evidence="9">
        <location>
            <begin position="9"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="domain" description="Ribosomal_L11" evidence="8">
        <location>
            <begin position="72"/>
            <end position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010537"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003978"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU003979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF03946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN93922.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="14969" checksum="2A02B53CDE550891" modified="2018-04-25" version="1">MAKKVAGKLKLQVNAGKANPSPPIGPALGQRGINIMEFCKAFNARTQEMEVGQPTPVIITYYTDKSFTMELKTPPASYLLKKAAGLKSASKTPGKTSAGSVTVAQLREIATTKMKDLNANDVEAAMLIIAGSARSMGIEVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8X7</accession>
    <name>A0A2M9P8X7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001289">
        <property type="protein sequence ID" value="PJN93984.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="158"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93984.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20954" checksum="BBFC32473CE60E18" modified="2018-04-25" version="1" fragment="single">MRRAIASLGRYAATPRVAKHRLFVWFHPSILPDCQLVVIARDDDATFGILHSRFHELWSLRMGTSLEDRPRYTPSTTFETFPFPEGLTPDIPASAYESDPRAQAIAAAAADLDRLRQAWLNPPDLVRREPEVVPGYPDRLLPVDDAAAAALKKRTLTKSLQRPSRLARPRPCKARRGGGPGLRLGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P936</accession>
    <name>A0A2M9P936_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16785</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the peptidase C40 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001237">
        <property type="protein sequence ID" value="PJN94053.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000064">
        <property type="entry name" value="NLP_P60_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011929">
        <property type="entry name" value="Phage_pept_NlpC/P60"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02219">
        <property type="entry name" value="phage_NlpC_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51935">
        <property type="entry name" value="NLPC_P60"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NlpC/P60" evidence="2">
        <location>
            <begin position="49"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007074"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94053.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="190" mass="21120" checksum="A7D883C11F190E8B" modified="2018-04-25" version="1">MRENLGVILRLQVSQKVFIVSKKSIFRQPGAARDTSRYQSEPAVSQRTVADPARVIAIARSWLGTPYHDQASLRGVGCDCLGLARGIWREVVGPEPFPIPPYSRDWGENGPREVLAEGARAMVIEVSPAEPGPAALVLFRIKPRAIAKHVGILTGPDSFLHAYERLGVIEEPLTQSWRRRIAFAFLFPQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P945</accession>
    <name>A0A2M9P945_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16700</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001226">
        <property type="protein sequence ID" value="PJN94067.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94067.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5001" checksum="79044379C03691D0" modified="2018-04-25" version="1" fragment="single">SVFAGQFASPLLAGPFIAGHGYAATYLGATVLLALISAGAAAIGLRLRRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P973</accession>
    <name>A0A2M9P973_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16560</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001208">
        <property type="protein sequence ID" value="PJN94094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014637786" evidence="2">
        <location>
            <begin position="25"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="21130" checksum="45A39C87337BE55D" modified="2018-04-25" version="1" fragment="single">MPASFTRRAALAILLAATPALAWAFPDKPVTLVIPFAAGGSTDVVGRIVAERMSQDLGQQVVVENVGGAGGSLGAGQVARAEPDGYTVLMGTVATHALNPLILKQKPYDPIEDFEPVSLLVIVPNVLAVNPELPVTTVQELIDLAKKEPGTLAYASSGNGTPLHLSGELFKFMAGVDIQHVPYKGSGPALTDVLGNQVPIIFD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N4</accession>
    <name>A0A2M9P9N4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15755</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001111">
        <property type="protein sequence ID" value="PJN94229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010290">
        <property type="entry name" value="TM_effector"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05977">
        <property type="entry name" value="MFS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="64"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="237"/>
            <end position="258"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="270"/>
            <end position="289"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="28"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="290" mass="29357" checksum="4AD86CAE7D1A08CB" modified="2018-04-25" version="1" fragment="single">MNAATGSGGPEATGNEARGALAPLANPTYRTFWVASLASNLGGLIQAVAAAWTMTTLAASADMVALVQASTTLPIMLFSLASGAIADNFNRRRVMIAAQVGMLAVSIALAACAWANLLTPWLLLGFTFAIGCGVALNNPSWQASVGDIVPRQDLPAAVALNSVGFNLTRSVGPAIGGVIVATLGVAAAFAANALSYFAIIAALLVWKPNLPLRKLPPESLGQAMGAGLRYTAMSPHIGVVLLRSFLFGLTSIAVLALLPIVSRTLVGGGALTYGLLLGAFGLGAIGGAFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q3</accession>
    <name>A0A2M9P9Q3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">PBECR1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_15485</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001079">
        <property type="protein sequence ID" value="PJN94273.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041092">
        <property type="entry name" value="PBECR1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18809">
        <property type="entry name" value="PBECR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PBECR1" evidence="2">
        <location>
            <begin position="5"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="84"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF18809"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94273.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="15920" checksum="6F58A443E319C43D" modified="2018-04-25" version="1" fragment="single">MPEPISLVWGEKGDGRRGSGAGLAKIADRHPEVLADLQGMLSAATQVVSRTDNRIRLESDGYYFVVSRDFKGAPHRPWLLTAFGKEKQGAERSMGRSSGFPEASSASALPAPENTSSAPAVQGPDIRLVDDADFGAGSAAPLIDAANRSALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9T0</accession>
    <name>A0A2M9P9T0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001062">
        <property type="protein sequence ID" value="PJN94298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IstB_IS21" evidence="1">
        <location>
            <begin position="9"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8730" checksum="AAAC103AADDEB158" modified="2018-04-25" version="1" fragment="single">MERSAIMTTMGDLKLFGMRSAYDEIVATAVKRQHEPQRVVSDLLTAELSEKQARSIKYQIAIAKLPLAKEIDEFAFE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA11</accession>
    <name>A0A2M9PA11_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001018">
        <property type="protein sequence ID" value="PJN94375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="38"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="38"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7705" checksum="7025F6B34A1242D8" modified="2018-04-25" version="1">MKRPNPLPPDQMTPAERRAELCGLLALGLVRLRMRETEEVSDDTGERCLHYPPDQCRHATPTHRRNA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA18</accession>
    <name>A0A2M9PA18_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cobalt transporter subunit CbtB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14845</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001014">
        <property type="protein sequence ID" value="PJN94383.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012667">
        <property type="entry name" value="CbtB_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09489">
        <property type="entry name" value="CbtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02459">
        <property type="entry name" value="CbtB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94383.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6174" checksum="9006B36F922DDA30" modified="2018-04-25" version="1">MTRTTSAPSASTSSIASLAAQHLIAAAIGAFVIGMVGFSQMSVAHNAGHDYRHSMAFPCH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA44</accession>
    <name>A0A2M9PA44_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Hydrolase_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000995">
        <property type="protein sequence ID" value="PJN94413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.2520">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011105">
        <property type="entry name" value="Cell_wall_hydrolase_SleB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042047">
        <property type="entry name" value="SleB_dom1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07486">
        <property type="entry name" value="Hydrolase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Hydrolase_2" evidence="1">
        <location>
            <begin position="130"/>
            <end position="228"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07486"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="229" mass="24636" checksum="928784EF62E440B2" modified="2018-04-25" version="1">MRLRSCLKGPGSCAFLRVGRHGFFFCCAGLWRNSAHLPQPPRPVAAEHATLAHPKQPWSPAVRAVAAVFALLFASLAVAGTSAHAVEPPLARADYSPSTEAVKVKVKAKGVSDADRACLTEAIYFEAQPSAEAQRAVAHVILNRAKDKRFPKTVCGVVKDGCQFSYRCSGRSLALKDKEKRVKAARSAEAVLAGASDPTNGALFFHSSRIKPGWKHKRTGVIGGNVFYR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA45</accession>
    <name>A0A2M9PA45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Cation tolerance protein CutA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_14750</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001005">
        <property type="protein sequence ID" value="PJN94399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008152">
        <property type="term" value="P:metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003953">
        <property type="entry name" value="FAD-binding_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00890">
        <property type="entry name" value="FAD_binding_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00100">
        <property type="entry name" value="cNMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="4">
        <location>
            <begin position="1"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="234"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="239"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="28766" checksum="E058790F439DEF44" modified="2018-04-25" version="1" fragment="single">MIDRIRAYGREEVVEPGAALFARGDRRADFFVVLDGEIGIFRSPDGGCENHLTSHRAGQFTGELDHVSARALLVSARAIARSRVIRVPTADFRRLMSAEPDIGEIVMRAFILRRMGFLHHGDAGITLIGAASQGDTLRLERFAMRNGYPLRLVDLADPEAPALMRELSLAAGDLPAVVTPDRAVLRNPSTMDFADRLGLTERFDPEEVWDLAVVGAGPAGLAAATYAASEGLKTAIPPPWTSPTASASPSASIRRRSGTWRSSAPVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAD1</accession>
    <name>A0A2M9PAD1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000949">
        <property type="protein sequence ID" value="PJN94484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7737" checksum="7261CD3FFCE9041D" modified="2018-04-25" version="1">MPSRASRLGKPKDDGERSVIAENILDRDFQADRPNQKWPADFTSIWTAEGWLYVAVVPGLFRSESSGGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF3</accession>
    <name>A0A2M9PAF3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UPF0056 membrane protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_14140</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 7">Belongs to the UPF0056 (MarC) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000939">
        <property type="protein sequence ID" value="PJN94502.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002771">
        <property type="entry name" value="Multi_antbiot-R_MarC"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33508">
        <property type="entry name" value="PTHR33508"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01914">
        <property type="entry name" value="MarC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00427">
        <property type="entry name" value="TIGR00427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="81"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="112"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009784"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU362048"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94502.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15094" checksum="6447B009C880FA08" modified="2018-04-25" version="1" fragment="single">GAVGIGIPAFRIAGGLLLFLTAVEMLFEKRQPRREKTMHEAEALPDPTVFPLATPLIAGPGALATMILLVGQHPGDLGGQATVYLTMVAVLAICWLFFRLGGTIERLLGPTGINVVTRLLGMLLAALAVQFVLQGLRDFGFGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP8</accession>
    <name>A0A2M9PAP8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000875">
        <property type="protein sequence ID" value="PJN94613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="9717" checksum="DC406D8AF0534EF9" modified="2018-04-25" version="1" fragment="single">AETGSRGARLAAWSPDYAGHCLLEGAATDPADPRAELQDLVAALSGRGALSGYLAEILATSDIVLCLDPRPPGCRGYFEPASGVLALKPRLDLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ1</accession>
    <name>A0A2M9PAQ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">AEC family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_13470</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the auxin efflux carrier (TC 2.A.69) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000874">
        <property type="protein sequence ID" value="PJN94614.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1530.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004776">
        <property type="entry name" value="Mem_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038770">
        <property type="entry name" value="Na+/solute_symporter_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03547">
        <property type="entry name" value="Mem_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="20"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="121"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="149"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="182"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="211"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="241"/>
            <end position="262"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94614.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="27777" checksum="80F267A76CF56008" modified="2018-04-25" version="1">MLFRGIVNLDLGAVFDWRLLGSFYTGAILCFVLGILGARKIFHARPGESVAIGFAALFSNSLLLGVPIMSRAYGADSLAPNFAIISIHAPLCYLIGITTMEFSRADGRGLKDTARAIARALFRNALMIGLGLGFIVNLSGLTLPEPVTIAVDMIADSALPAALFGLGGVLTRYSLHAQLGEAGLIAGLSLVVHPAVAFVLSHHVFGLPPEFVRSAVVTAAMAPGVNAYVFASLYARAQAEAASAVLLATGLSVVTVTGWLALLDAVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU8</accession>
    <name>A0A2M9PAU8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000841">
        <property type="protein sequence ID" value="PJN94663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="60" mass="6459" checksum="B8CAC53BE044A660" modified="2018-04-25" version="1" fragment="single">LETEAAARGRSLLTLDTRTGDAAEPLYAGLGFQTAGVIPGYCRDTLSDRMDPTTIMWKAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB32</accession>
    <name>A0A2M9PB32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">rRNA maturation RNase YbeY</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">ybeY</name>
        <name evidence="8" type="ORF">CNY89_12615</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the endoribonuclease YbeY family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000791">
        <property type="protein sequence ID" value="PJN94753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006364">
        <property type="term" value="P:rRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.390.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023091">
        <property type="entry name" value="MetalPrtase_cat_dom_sf_prd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002036">
        <property type="entry name" value="YbeY"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020549">
        <property type="entry name" value="YbeY_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02130">
        <property type="entry name" value="YbeY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00043">
        <property type="entry name" value="TIGR00043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01306">
        <property type="entry name" value="UPF0054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0862">Zinc</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022759"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="128" mass="14192" checksum="C532F64DF646577D" modified="2018-04-25" version="1">MTSPAPRVSIRPNRASYDYGGHNARFCQSRLACRDRGCRPGRSRSCFRAGLRHVHRLHEGLRRRDLETCMAEAEAGGIAPADHVTHLVVHGVLHLLGFDHELEAEADAMEALETKILARLGVADPYRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD7</accession>
    <name>A0A2M9PBD7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SBP_bac_5 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12045</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000735">
        <property type="protein sequence ID" value="PJN94845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="53"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="309" mass="34234" checksum="ED509D49FCD363FB" modified="2018-04-25" version="1">MAQPWNCTVATSIRRAPSRSAIAIASGNCSMFWRCITKFSVSGTPAAAAIYETPPSYVKVFDDLGLQRSEALTGNTLCVRMNVTAPPFDSLDVRRAVQLAVDNRVVLDLGYQGRGRVAENHHCGPMHPEYAMLPPISRDPGRAMQLLRAAGQAGVEMELVSLDDEFVRNTCDAVAAQMRDAGMSVKRTVLPAAVYRENWTRFPFSCTEWGARPLGVQVYALAYRSNEPWNETGFGDAEFDALLARAFGVADPLPRRDLMARMEAILQGSGVLVQPFWRAIFRHSTERVQGLVMHPTFELQLERVWLAQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE1</accession>
    <name>A0A2M9PBE1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Formate dehydrogenase subunit gamma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_12020</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the formate dehydrogenase gamma subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000732">
        <property type="protein sequence ID" value="PJN94851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009326">
        <property type="term" value="C:formate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008863">
        <property type="term" value="F:formate dehydrogenase (NAD+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022904">
        <property type="term" value="P:respiratory electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011577">
        <property type="entry name" value="Cyt_b561_bac/Ni-Hgenase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016174">
        <property type="entry name" value="Di-haem_cyt_TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006471">
        <property type="entry name" value="Formate_DH_gsu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01292">
        <property type="entry name" value="Ni_hydr_CYTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81342">
        <property type="entry name" value="SSF81342"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01583">
        <property type="entry name" value="formate-DH-gamm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="69"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="128"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="167"/>
            <end position="188"/>
        </location>
    </feature>
    <feature type="domain" description="Ni_hydr_CYTB" evidence="10">
        <location>
            <begin position="22"/>
            <end position="199"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF01292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="25982" checksum="B360B7D78E2CC56C" modified="2018-04-25" version="1">MAREYSEPGDRIETRHPVEVRRYGPLTRVNHWFTAACLILLLISGLGFFHPSLYFLTELFGGGQNARAFHPWLGVALFFSFLGLFVQLVRLNLPRREDAVWMANARDVISGHEERLPELGKYNAGQKFVFWAMSGLIVVLIVTGFMMWEAYFDGFVSIPVRRVATMIHALAAVLIICVWILHVYAAIWTRGTISAMTKGTVTGGWAWRHHRKWLRELARLDRRGPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG7</accession>
    <name>A0A2M9PBG7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Glyco_trans_2-like domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11755</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000710">
        <property type="protein sequence ID" value="PJN94886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="6"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="115"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="138"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15041" checksum="5D3201A999BBE252" modified="2018-04-25" version="1" fragment="single">MHSELIVATYNSPRALRLCLASVAGQRVMPDGIAIADDGSGPETAAVVEAFRAAHPALPVRHVWHEDTGFRKAAILNEAIATSEAEVLVFIDGDVMIHPDFVARHLELARPRPLVLRQPDPARRAGHPGGDRGRHRLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ7</accession>
    <name>A0A2M9PBJ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11690</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000705">
        <property type="protein sequence ID" value="PJN94899.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="160"/>
            <end position="178"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="207"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="259"/>
            <end position="281"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="66"/>
            <end position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94899.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="287" mass="31925" checksum="563D3DA8B188340A" modified="2018-04-25" version="1">MHKTADNRAWLLILPVFLLVAFNAVLPLMTVVNYSLQDIFGPGQRAFIGVEWFRETLRDPAIQASFLRQLLFSSLVLAIEIPLGVAIALTLPRAGWKASAAIVLVAIPLLIPFNVVGMIWQVYARPEIGLFGRVINDLGVPFNYTGDPLSAWVTILLMDAWHWTPLVILLAYAGLCSIPEPYYQAARIDGASRWAVFRYIELPKLRGVLTIAFLLRFMDSFMIYTEPYVVTGGGPGSSTTFLSIRLVNMAVGQFDLGPAAAFSLIYFLVILLFSYVFYTILQRAGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBS5</accession>
    <name>A0A2M9PBS5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11275</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000670">
        <property type="protein sequence ID" value="PJN94969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070573">
        <property type="term" value="F:metallodipeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008257">
        <property type="entry name" value="Pept_M19"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10443">
        <property type="entry name" value="PTHR10443"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01244">
        <property type="entry name" value="Peptidase_M19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51365">
        <property type="entry name" value="RENAL_DIPEPTIDASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="23988" checksum="F18AA22932D25B68" modified="2018-04-25" version="1" fragment="single">VAAVMHMEGAEAIGPDLDALHVFHAAGLRSLGPVWSRPTIFGPGVPFAFPADPDIGEGLTELGRDLVRECARLRILVDLSHMNAAGVDDVARLTEGPLVATHSGAHAVCPSSRNLTDRQLALIAERGGMVGLNFAVGFLRPDGRRQPAMGLDVMLRHLDHLILRLGEDHVGFGSDFDGALIPNAIRDATGLPALIAALRAHGYGETLIAKLARGNWIATLERVWGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC02</accession>
    <name>A0A2M9PC02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000639">
        <property type="protein sequence ID" value="PJN95034.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95034.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7493" checksum="B7090BD794079D0D" modified="2018-04-25" version="1">MVSPLAFLVEAEHRGRGGRRFSDFPVCGRISQTTCVQREPGGKFMQTDDIDRRILRLMQEKRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC41</accession>
    <name>A0A2M9PC41_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_10515</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000608">
        <property type="protein sequence ID" value="PJN95099.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016757">
        <property type="term" value="F:glycosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001296">
        <property type="entry name" value="Glyco_trans_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028098">
        <property type="entry name" value="Glyco_trans_4-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13439">
        <property type="entry name" value="Glyco_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00534">
        <property type="entry name" value="Glycos_transf_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glyco_trans_4-like_N" evidence="3">
        <location>
            <begin position="15"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="domain" description="Glycos_transf_1" evidence="2">
        <location>
            <begin position="186"/>
            <end position="348"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="344"/>
            <end position="373"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00534"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13439"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95099.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="373" mass="40387" checksum="3B0537C7A1D0CA57" modified="2018-04-25" version="1">MRQGKITHLIDGLGAGGAERLLVAYAPRLVRLGYDVEVVVLQERGAIRMQDQLTAAGIPVRRIPVDNLRRVDQVIGFHREMKRSGGDLLHAHLEFASMLSAISAHMQHKAMVATLHTLDAPEAVDRNSFRRWLMYKTLERYADTVICLTKANAEIARQTGLGDAAVEILPNGIEVDQFGATPTLDRAAIRGQFGIPLDASLAVAVCVLRPEKGLDRLLQALPAVRARTPDTHLLIVGDGPEMDRLTGIVAAEGLTEFVHFAGYRSDVSDIMQASDVFVLPTMFDAQPTVIIEAMASSLPVVSTTFAGVPDMVTDGEHGLLVPPDDVPALTEALARVIGDPDLARRMAARDGRARRRNSRSTARSSGSPTSTTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC67</accession>
    <name>A0A2M9PC67_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Transcription termination/antitermination protein NusG</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_10335</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000593">
        <property type="protein sequence ID" value="PJN95123.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.940">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006645">
        <property type="entry name" value="NGN_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036735">
        <property type="entry name" value="NGN_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043425">
        <property type="entry name" value="NusG-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001062">
        <property type="entry name" value="Transcrpt_antiterm_NusG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265">
        <property type="entry name" value="PTHR30265"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30265:SF2">
        <property type="entry name" value="PTHR30265:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02357">
        <property type="entry name" value="NusG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00738">
        <property type="entry name" value="NGN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82679">
        <property type="entry name" value="SSF82679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="3" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="NGN" evidence="5">
        <location>
            <begin position="2"/>
            <end position="107"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="107"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95123.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="12226" checksum="47910F2A7C7D8F93" modified="2018-04-25" version="1" fragment="single">MAMRWYSVAVLSNFEKKVEQSIREAAAQQGLEDEIAEIMVPTEEVIEIRRGKKVQTEKRFMPGYVLVKMELTDRTYHLISNTNRVTGFLGPQGKPSPMKDAEVARIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC89</accession>
    <name>A0A2M9PC89_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">1-deoxy-D-xylulose-5-phosphate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">dxs</name>
        <name evidence="4" type="ORF">CNY89_10100</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="2">Homodimer.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000575">
        <property type="protein sequence ID" value="PJN95165.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008661">
        <property type="term" value="F:1-deoxy-D-xylulose-5-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02007">
        <property type="entry name" value="TPP_DXS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005477">
        <property type="entry name" value="Dxylulose-5-P_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005475">
        <property type="entry name" value="Transketolase-like_Pyr-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005474">
        <property type="entry name" value="Transketolase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43322">
        <property type="entry name" value="PTHR43322"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13292">
        <property type="entry name" value="DXP_synthase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02779">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00861">
        <property type="entry name" value="Transket_pyr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00204">
        <property type="entry name" value="dxs"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00801">
        <property type="entry name" value="TRANSKETOLASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TRANSKETOLASE_1" evidence="3">
        <location>
            <begin position="36"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="432"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS00801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95165.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="432" mass="45542" checksum="E99D8A336BA2A2E9" modified="2018-04-25" version="1" fragment="single">MTDPRPSTPLLDRIASPSDLKGLTIPELARVAEELRAETISAVSVTGGHLGAGLGVVELTVAIHAVFNTPKDKLIWDVGHQCYPHKILTGRRDRIRTLRAGGGLSGFTKRSESPYDPFGAAHSSTSISAGLGFAAARDLGARDVGDVVAVIGDGSMSAGMAYEAMNNAGHLKKRLFVILNDNEMSIAPPVGAMSSYLSRLYAGEPFQDLYAAAKGAVSLLPGPLREGAKRARDLVKSATVGGRLFEDLGFSYVGPIDGHDMDQLVTILRSVKARAHGPVLIHALTRKGKGYAPAEASADKYHGVSKFDVVTGAQAKAPSNAPSYTSVFARALVKEAERDERIVAVTAAMPDGTGLNLFAERFPKRVFDVGIAEQHAVTFCAGMAAAGMRPFCALYSTFLAPDAGQAHLARCTSVARIIRDDRAHAASGRGVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB8</accession>
    <name>A0A2M9PCB8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Lipoprotein signal peptidase</fullName>
            <ecNumber evidence="6">3.4.23.36</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">lspA</name>
        <name evidence="9" type="ORF">CNY89_09950</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This protein specifically catalyzes the removal of signal peptides from prolipoproteins.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>Release of signal peptides from bacterial membrane prolipoproteins. Hydrolyzes -Xaa-Yaa-Zaa-|-(S,diacylglyceryl)Cys-, in which Xaa is hydrophobic (preferably Leu), and Yaa (Ala or Ser) and Zaa (Gly or Ala) have small, neutral side chains.</text>
            <dbReference type="EC" id="3.4.23.36"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase A8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.23.36" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000564">
        <property type="protein sequence ID" value="PJN95190.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004190">
        <property type="term" value="F:aspartic-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00161">
        <property type="entry name" value="LspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001872">
        <property type="entry name" value="Peptidase_A8"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33695">
        <property type="entry name" value="PTHR33695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01252">
        <property type="entry name" value="Peptidase_A8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00781">
        <property type="entry name" value="LIPOSIGPTASE"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00077">
        <property type="entry name" value="lspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00855">
        <property type="entry name" value="SPASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 6" id="KW-0064">Aspartyl protease</keyword>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="43"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006139"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022750"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000594"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004181"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95190.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14233" checksum="11A9F6767CA97D67" modified="2018-04-25" version="1" fragment="single">LALAQLVPGHPVALAPGLNLTLGFNEGASFGMLAGAMAGRPEAMALLTGILTLVLAVVALRAQRPPEAAGFALIVGGSLGNILDRLRRGTVTDFFDIFWRDWHWPTFNFADIAIVCGAGLVLAGQAPRRGQETLDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD2</accession>
    <name>A0A2M9PCD2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000562">
        <property type="protein sequence ID" value="PJN95196.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95196.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="15695" checksum="8F982565EF7CB36A" modified="2018-04-25" version="1">MFFQTNNDPSVGFGWPFVPHSTGFEMRRSSILSSHSMSPGVPDHIDPIFHTCLWRRNSPTHYTSGNGATYPAPLNRTLNYSGTIPNSRVRMTNCVLPAGIANSGDYNPNLSVEVDVFRSNTAVPDGWAATDVALGKVGAYGYEN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI3</accession>
    <name>A0A2M9PCI3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Xanthine dehydrogenase small subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">xdhA</name>
        <name evidence="5" type="ORF">CNY89_09675</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000540">
        <property type="protein sequence ID" value="PJN95234.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071949">
        <property type="term" value="F:FAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004854">
        <property type="term" value="F:xanthine dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004855">
        <property type="term" value="F:xanthine oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.43.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.465.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002888">
        <property type="entry name" value="2Fe-2S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036884">
        <property type="entry name" value="2Fe-2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006058">
        <property type="entry name" value="2Fe2S_fd_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016208">
        <property type="entry name" value="Ald_Oxase/xanthine_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005107">
        <property type="entry name" value="CO_DH_flav_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036683">
        <property type="entry name" value="CO_DH_flav_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016166">
        <property type="entry name" value="FAD-bd_PCMH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036318">
        <property type="entry name" value="FAD-bd_PCMH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016167">
        <property type="entry name" value="FAD-bd_PCMH_sub1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016169">
        <property type="entry name" value="FAD-bd_PCMH_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002346">
        <property type="entry name" value="Mopterin_DH_FAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014307">
        <property type="entry name" value="Xanthine_DH_ssu"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11908">
        <property type="entry name" value="PTHR11908"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03450">
        <property type="entry name" value="CO_deh_flav_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00941">
        <property type="entry name" value="FAD_binding_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01799">
        <property type="entry name" value="Fer2_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47741">
        <property type="entry name" value="SSF47741"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55447">
        <property type="entry name" value="SSF55447"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56176">
        <property type="entry name" value="SSF56176"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02963">
        <property type="entry name" value="xanthine_xdhA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00197">
        <property type="entry name" value="2FE2S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51387">
        <property type="entry name" value="FAD_PCMH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0274">FAD</keyword>
    <keyword evidence="1" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="3">
        <location>
            <begin position="6"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="domain" description="FAD-binding PCMH-type" evidence="4">
        <location>
            <begin position="193"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="413"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95234.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="413" mass="44157" checksum="623CA8EFB6584218" modified="2018-04-25" version="1" fragment="single">MTAERHVLRFLLNGRAIELDQCPPTQTLLDFLRIERRLTGTKEGCAEGDCGACTVLVGRLTPAGLVYESVNACIRFTGSLDGCHVVTVEALAAGGDLHPVQQAMVEHHGSQCGFCTPGFVMSLYALWMRTPQPSVPQIEKALQGNLCRCTGYAPIVRAAQAVTADPAKDPLVAERERVTAALTAMKDGARVTLGTGKAALILPADPADFAKALAENPGATVVAGSTDVGLWVTKFMRPIGPLIFIAHLDELRTIEETAGGVTLGAGVSYTEAFPVIARRFPQAAEVWNRIGGEQVRNMGTIGGNVANGSPIGDTPPILIALGARLRLRSVHGPREMPIEDFFIDYGKQDRRADEFVEAIHIPALPENKTFAAYKVTKRLDEDITAVLGAFRLTFDGDVVAEARFAWGGMAATP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCM5</accession>
    <name>A0A2M9PCM5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Small-conductance mechanosensitive channel</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_09390</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Mechanosensitive channel that participates in the regulation of osmotic pressure changes within the cell, opening in response to stretch forces in the membrane lipid bilayer, without the need for other proteins. Contributes to normal resistance to hypoosmotic shock. Forms an ion channel of 1.0 nanosiemens conductance with a slight preference for anions.</text>
    </comment>
    <comment type="subunit">
        <text evidence="8">Homoheptamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the MscS (TC 1.A.23) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000517">
        <property type="protein sequence ID" value="PJN95283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008381">
        <property type="term" value="F:mechanosensitive ion channel activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010920">
        <property type="entry name" value="LSM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045275">
        <property type="entry name" value="MscS_archaea/bacteria_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006685">
        <property type="entry name" value="MscS_channel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011066">
        <property type="entry name" value="MscS_channel_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023408">
        <property type="entry name" value="MscS_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30221">
        <property type="entry name" value="PTHR30221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00924">
        <property type="entry name" value="MS_channel"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50182">
        <property type="entry name" value="SSF50182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82689">
        <property type="entry name" value="SSF82689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0407">Ion channel</keyword>
    <keyword evidence="8" id="KW-0406">Ion transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0346">Stress response</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="68"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="97"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008017"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU369025"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="288" mass="31193" checksum="CAC8675ADC9814E5" modified="2018-04-25" version="1" fragment="single">LGALAADPLLGLGRSMVEAIPDLIVLALIVTLTWQALRLVTRFFDAVRVGRLSFHGFDPDWARPTARIVRAAVVLLGLVMAYPYIPGSSSEAFKAISIFAGVMLSLGATSMIANIVAGNSLIYRRAFRIGDRVEIAGVLGDVEELTAQATYLRTLKNERVTLPNALVLGSQVTNYTTLARSDGLILHAEVGIGYETPWREVEAMLLEAAARTEGLMASPTPFVLQKRLGDFAPVYEINAYTRDERAAQATLTRLLAAVQDVFAERGVQIMTPNYVSDPAQAKIPPRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ2</accession>
    <name>A0A2M9PCQ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000503">
        <property type="protein sequence ID" value="PJN95321.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014657380" evidence="1">
        <location>
            <begin position="21"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95321.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6475" checksum="09EA4C94B57E2F4E" modified="2018-04-25" version="1" fragment="single">MIRTIAALCVASALAAPAAAQNNPRAFDFAGDVYRLGGDVVFAGPDGRDAFLAGERVDLAGPIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD22</accession>
    <name>A0A2M9PD22_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Integration host factor subunit beta</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">ihfB</name>
        <name evidence="7" type="ORF">CNY89_08570</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 6">Heterodimer of an alpha and a beta chain.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000457">
        <property type="protein sequence ID" value="PJN95423.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005694">
        <property type="term" value="C:chromosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006417">
        <property type="term" value="P:regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020816">
        <property type="entry name" value="Histone-like_DNA-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005685">
        <property type="entry name" value="IHF_beta"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00988">
        <property type="entry name" value="hip"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00045">
        <property type="entry name" value="HISTONE_LIKE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4 6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0804">Transcription</keyword>
    <keyword evidence="6" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="6" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010529"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011870"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00018700"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95423.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10633" checksum="05BF8523D3A26D78" modified="2018-04-25" version="1">MIKSELIQKIAEENPHLFQRDVERIVATVFEEVIEAMAAGHRVELRGFGAFSVKKRDSRTGRNPRTGDSVEVEEKYVPFFKTGKALRDRLNEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD24</accession>
    <name>A0A2M9PD24_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Trehalose-6-phosphate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08645</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the glycosyltransferase 20 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000462">
        <property type="protein sequence ID" value="PJN95412.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005992">
        <property type="term" value="P:trehalose biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03788">
        <property type="entry name" value="GT20_TPS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001830">
        <property type="entry name" value="Glyco_trans_20"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10788">
        <property type="entry name" value="PTHR10788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00982">
        <property type="entry name" value="Glyco_transf_20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008799"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95412.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="445" mass="49726" checksum="25B5074BCF21B642" modified="2018-04-25" version="1" fragment="single">SPWLSPTRSPSGAAGLWFGWSGEVDEREQRGIRLVTDSGVDFALADLTPAEHEQYYLGYSNRTLWPVFHYRVDLAVFDEPSFDVYESVNRRFGRLLAGLTKPGDVVWLHDYHFLLMGLEMRASGWDGALGFFLHIPFPAPEVFISLPQHQRLARGLAAFDLIGFQTDRDTANFRRYLIAHCDAEEVDATHIAAFGRTFETRTFSIGIDATEMATMAVSPRAEEAAERVGEKGEARALVIGVDRMDYSKGLPQRMEAFGRLLDDHPELHGKVSFLQIAPPSRESVDAYQALREEMDRLAGRINAEIADLDWQPIRYLARGYDRDVLAGLFRLAKVGLVTPLHDGMNLVAKEYVAAQDPEDPGVLILSEFAGAAEQLKDALLVNPHDIGGMADAIHRALVMPLAERKERWDALDKAVREQDIAWWRHGFLDALEAATRPADAETAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD70</accession>
    <name>A0A2M9PD70_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000431">
        <property type="protein sequence ID" value="PJN95486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8337" checksum="A415BB551DD4EC54" modified="2018-04-25" version="1">MTRYVLTVPYTFERNGQTETRFRRVGAIFENARRETGEVFLSVKLDFPVAVTELVGFPPRPEDDPASDEVTQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD95</accession>
    <name>A0A2M9PD95_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Prephenate dehydratase</fullName>
            <ecNumber evidence="3">4.2.1.51</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_08075</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + prephenate = 3-phenylpyruvate + CO2 + H2O</text>
            <dbReference type="Rhea" id="RHEA:21648"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:18005"/>
            <dbReference type="ChEBI" id="CHEBI:29934"/>
            <dbReference type="EC" id="4.2.1.51"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-phenylalanine biosynthesis; phenylpyruvate from prephenate: step 1/1.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.51" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000422">
        <property type="protein sequence ID" value="PJN95509.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00121">
        <property type="reaction ID" value="UER00345"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004106">
        <property type="term" value="F:chorismate mutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004664">
        <property type="term" value="F:prephenate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009094">
        <property type="term" value="P:L-phenylalanine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008242">
        <property type="entry name" value="Chor_mutase/pphenate_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001086">
        <property type="entry name" value="Preph_deHydtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018528">
        <property type="entry name" value="Preph_deHydtase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00800">
        <property type="entry name" value="PDT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001500">
        <property type="entry name" value="Chor_mut_pdt_Ppr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00857">
        <property type="entry name" value="PREPHENATE_DEHYDR_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51171">
        <property type="entry name" value="PREPHENATE_DEHYDR_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0057">Aromatic amino acid biosynthesis</keyword>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="6" id="KW-0584">Phenylalanine biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Prephenate dehydratase" evidence="9">
        <location>
            <begin position="12"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="domain" description="ACT" evidence="10">
        <location>
            <begin position="200"/>
            <end position="277"/>
        </location>
    </feature>
    <feature type="site" description="Essential for prephenate dehydratase activity" evidence="8">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013147"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023222"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR001500-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95509.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="291" mass="31109" checksum="3616E09223BAA850" modified="2018-04-25" version="1">MSQKAMSQSVLPVAFQGVPGAYSHQACAEVFPGREAMACDTFEAAIAAVREGQAGHAMLPVENSTYGRVADIHHLLPESGLHIIGEHFLRVHINLLAPQGARLEDIRTAMSHTVLLGQCRAFLRAHKLATRVGADTAGSAEIVAQEGDPTQAALASEFAAQIYGLDVLARHIEDQSNNTTRFLVMAPSPNPSPAAPAVTTFVFRVRNLPAALYKALGGFATNGVNITKLESYMVGGLFTATQFYADVEGRPEDPNVARALDELTYFTSSLQILGVYPANPFRRSNYGSGGI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD97</accession>
    <name>A0A2M9PD97_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Flagellar hook-basal body protein FliE</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08165</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Bacterial flagellum basal body</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the FliE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000427">
        <property type="protein sequence ID" value="PJN95498.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009425">
        <property type="term" value="C:bacterial-type flagellum basal body"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003774">
        <property type="term" value="F:cytoskeletal motor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005198">
        <property type="term" value="F:structural molecule activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071973">
        <property type="term" value="P:bacterial-type flagellum-dependent cell motility"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001624">
        <property type="entry name" value="FliE"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02049">
        <property type="entry name" value="FliE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0966">Cell projection</keyword>
    <keyword evidence="3" id="KW-0969">Cilium</keyword>
    <keyword evidence="3" id="KW-0282">Flagellum</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95498.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="42" mass="4492" checksum="522D5F301151D1A3" modified="2018-04-25" version="1" fragment="single">VGRADPQAVVEALAATELAVQTAVALRDKVVEAYQEILRMPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD99</accession>
    <name>A0A2M9PD99_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ABC2_membrane domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_08180</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000428">
        <property type="protein sequence ID" value="PJN95492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="36"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="60"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="6">
        <location>
            <begin position="2"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12972" checksum="93C8CC39EAEDC128" modified="2018-04-25" version="1">MISGLFLAALLGLGVGTVNCVLFGLYPTWKNVWSVLSRPLFILSGVLFLFESAPPTFQKILWWNPLIHVVALVRSGVYAEYNPLFISYPYVIGVALTLFVIGAYLLRRHTSLLLDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC4</accession>
    <name>A0A2M9PDC4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Short-chain dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08065</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000421">
        <property type="protein sequence ID" value="PJN95512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="21577" checksum="969F2D0C5C891F9D" modified="2018-04-25" version="1" fragment="single">HACDVATAEGCAGLIEAARHAFGGADILINNAGAGSNETILDAPDDKWQAYWDLHVMAAVRLARGFAPMMAERGGGAILNNASICAVQPLWYEPIYNVTKAALLMLSKTMASEFIPMNVRVNTVNPGLILTPDWVKTAKALSADTGDWQGYLQSVADEHAPIKRFGTVEELANFFVFLCSDRASYAVGSTHFVDGGMLRTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDE8</accession>
    <name>A0A2M9PDE8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000396">
        <property type="protein sequence ID" value="PJN95566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="126"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="493" mass="54173" checksum="F8717527A6E2B693" modified="2018-04-25" version="1" fragment="single">MMGAAESGPSPEVLAAIVDLDANERALMLKLRTKTRSKPFHVVTQEQQELGRRLERLLLALMDMDDEGGGLLMSLTAFGHEVAQALRDLGDKAPPPQRRKPDLRILSSELDRAEAEAAPPPARDPEGGKRPPKKRKPERETGEIYPGCPVTALGVHGKLFFYLDVLGQLHAVDNHTKDRMRALFGGRVDLLMGQWPTWSRGDDPKPIGWKQEDAAAAMQRACAEKGVWSAFEKVRGLGSWPDPDGGVILHCGDAILYRGKWEPPGAHDGFVYPSGPAIPRPLDEAGRVEPASQLLQTLESWRWLRGDLDAYLLLGWIVAAKFGGAIDWRPMAWITGDKGTGKSTLQKLIRLVMGGEGAILQSTDATEASIRQFLMQNTVPVALDELEADVDNRKSLAVVKLARQAASNGVVLRGGADHQGQEFRARSAFLFSSILMPPLLDQDISRLAVLELAPLERGETAPKLEASEWRKLGRALQTQVLAQWGRLHRTLEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI3</accession>
    <name>A0A2M9PDI3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Efflux transporter periplasmic adaptor subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000392">
        <property type="protein sequence ID" value="PJN95574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="47" mass="4825" checksum="30340CC3DE5532FB" modified="2018-04-25" version="1" fragment="single">LRPVEVLEFTPSAVRIAAGLEPGEIVVTAGVQALRPGQEVRLLGGAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN8</accession>
    <name>A0A2M9PDN8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">zinc-ribbon_6 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000356">
        <property type="protein sequence ID" value="PJN95660.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031321">
        <property type="entry name" value="UCP012641"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011201">
        <property type="entry name" value="Zinc-ribbon_6_bact"/>
    </dbReference>
    <dbReference type="Pfam" id="PF15887">
        <property type="entry name" value="Peptidase_Mx"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10005">
        <property type="entry name" value="zinc-ribbon_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF012641">
        <property type="entry name" value="UCP012641"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="zinc-ribbon_6" evidence="1">
        <location>
            <begin position="5"/>
            <end position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95660.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="351" mass="39052" checksum="C281104F986CE5D3" modified="2018-04-25" version="1">MKLATCDVCGRLLQFEQSTCRGCGAPLGFLPEAMLLTALEDLDDGLLAPKGRSGEAYRRCVNAEANGCNWLVATEAEDPRCLSCRLNRNLADMSVPLHRAKWRLLECAKRRLLYAMLRFGQSIAPKAGPEPRGLAFDFLVGSQGAPVMTGHAGGLITINIVEADSVERERQRIALNEPYRTLLGHFRHEAGHYYQTALVDDRGLEDACRAVFGDDTVSYSEAMTAYYAEGPKADWQDAYVTAYATMHPWEDFAETWAHYLHMVDTLDTGAGFGLSVKPRVGEDPRDATVIDFDPYQPPDFASLVAAWLPLTEAVNSLNRSMGQPDLYPFDLAPKVQEKLRFIHDLLHPSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT7</accession>
    <name>A0A2M9PDT7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Peptidase S41</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_07035</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the peptidase S41A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000347">
        <property type="protein sequence ID" value="PJN95682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008236">
        <property type="term" value="F:serine-type peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd07560">
        <property type="entry name" value="Peptidase_S41_CPP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.42.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001478">
        <property type="entry name" value="PDZ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041489">
        <property type="entry name" value="PDZ_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036034">
        <property type="entry name" value="PDZ_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004447">
        <property type="entry name" value="Peptidase_S41A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005151">
        <property type="entry name" value="Tail-specific_protease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17820">
        <property type="entry name" value="PDZ_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03572">
        <property type="entry name" value="Peptidase_S41"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00228">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00245">
        <property type="entry name" value="TSPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50156">
        <property type="entry name" value="SSF50156"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00225">
        <property type="entry name" value="prc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50106">
        <property type="entry name" value="PDZ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0645">Protease</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0720">Serine protease</keyword>
    <feature type="domain" description="PDZ" evidence="5">
        <location>
            <begin position="88"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="371"/>
            <end position="418"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="4">
        <location>
            <begin position="397"/>
            <end position="418"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009179"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004404"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50106"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="446" mass="47628" checksum="6B9E3BD779657F28" modified="2018-04-25" version="1">MNRVWLAGLGGAVAGLVVSTQFAGPIVAQEAKGEAEVYQQLDLFGDVFERIRSSYVEPVSEKQLIEAAINGMLQSLDPHSSYMPADDFDDMQVQTKGEFGGLGIEVTQENGFVKVVSPMDGTPADRAGIKAGDLITQVNGESVAGLPLDQAVDLMRGPVGSEIKITIARPDVPEPFDVTMKRETITIAAVRSRVEDDAVVLRVTTFNEQTYESLEKQLKEQVEAAGGMDKVAGFVLDLRNNPGGLLTQAIAVSDAFLNSGEVVSTRGRDPQDSERYNATEGDLAQGKPLVVVINGGSASASEIVAGALQDHRRAIVVGTQSFGKGSVQTVMPVQGDGGMRLTTARYYTPSGRSIQSLGVAPDIIVEQKTPEEAAADATAQPAGPMRSEADLRGSLTNDSLTEDEKKTLEEDRKKREETARLRAEDYQMSYALDILHGLSVLNGGTN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU2</accession>
    <name>A0A2M9PDU2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase_M23 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000347">
        <property type="protein sequence ID" value="PJN95683.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.70.70.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011055">
        <property type="entry name" value="Dup_hybrid_motif"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016047">
        <property type="entry name" value="Peptidase_M23"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01551">
        <property type="entry name" value="Peptidase_M23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51261">
        <property type="entry name" value="SSF51261"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M23" evidence="1">
        <location>
            <begin position="5"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01551"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95683.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12039" checksum="56F3360A5A7E67A3" modified="2018-04-25" version="1">MRIGAAPLALVTAPAGGRVRYAGPFLEYGYVVVLEPRADVLIVLAGLSTLAVRTGGTVEAGALLGLLGGRPLDAQEFLMTAEPGNEETPAETLYIELRHGRGPVDPAPWFQGRNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX1</accession>
    <name>A0A2M9PDX1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">YitT family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_06625</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000318">
        <property type="protein sequence ID" value="PJN95755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003740">
        <property type="entry name" value="YitT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02588">
        <property type="entry name" value="YitT_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="75"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="105"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="143"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="170"/>
            <end position="187"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="197" mass="20536" checksum="7DCB179D84532995" modified="2018-04-25" version="1">MIRHGPLADAQGVVFGAAMAALGIVLLAHLGLVTGQVAGIALLVARATGWPFGAVYLALNLPFLWLAWTRMGPGFTIKTLVAVALVAVFTTLQPRLVNFGAVDPVVGAALAGMMCGSGLLALFRHRASLGGIGVLSVLLQDRFGLRAGYTQMGVDACVFAAALFLLPLEAVLLSLLGAAVMNAFIAINHRRDWYVAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE71</accession>
    <name>A0A2M9PE71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2271 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06295</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000297">
        <property type="protein sequence ID" value="PJN95808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014605280" evidence="1">
        <location>
            <begin position="23"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="39"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="39" mass="3948" checksum="BA7513B6C8CA5E14" modified="2018-04-25" version="1" fragment="single">MKTLLATLALTTALTLPGLAMARPVTLTTTLNNYGGDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC1</accession>
    <name>A0A2M9PEC1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Peroxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05820</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000268">
        <property type="protein sequence ID" value="PJN95891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004601">
        <property type="term" value="F:peroxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006979">
        <property type="term" value="P:response to oxidative stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019791">
        <property type="entry name" value="Haem_peroxidase_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010255">
        <property type="entry name" value="Haem_peroxidase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037120">
        <property type="entry name" value="Haem_peroxidase_sf_animal"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03098">
        <property type="entry name" value="An_peroxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00457">
        <property type="entry name" value="ANPEROXIDASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48113">
        <property type="entry name" value="SSF48113"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50292">
        <property type="entry name" value="PEROXIDASE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="1" id="KW-0575">Peroxidase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="701" mass="75116" checksum="8D1A57D6D667D7C4" modified="2018-04-25" version="1">MRRCDMKALRCGKNAPGSTEACHKTPEIRPFRVEHTHCETALRFVAVRRERFKSLRFREECVTPEQSGKAHRSPSDGAAAEFALLSFPVIRVAMPVDPDVTFADSPRPVNGGAGPGRAGAVQPRLAPDSYTDGGATLAGADRPNPRLISNVVFNQLDANGDPIDMPSQERLSSLLWVWGQFLDHDLDLTGSSAASGTATIIPPSDDPHYPAGAIIPFNRSDFLAGTGTSAANPRQYANQITSFIDGSNMYGSSAEVAAGVRDGAKLRITAEGTIPLGVNDPVFGASAITGDIRSNENVALFAMHALFAREHNRLVDELAAADPTLTTAELFQGARARVEAIMQAITYNEFLPKLIGEGAIAEYTGFKSDVNPAILLEFSTAIYRLGHTLLSPTIERMNENGTTHALGNISLRDAFGRQPGLLESTGIEAIFRGMSNSTSQDFDTFMAEDVRSFLFGTTVGRDLAALNIQRGRDHGLPSYNEMREALGLGRVTNFEQISSDPEIVARLRAAYGDVDRIDLWVGGLAEDSVGGGIMGETFRAVMIEQFTRLRDGDAFWSQTRGFTQVELRELWGTTLSDVIQRNGDVTHLQDDVFLAYARQGGGDGADTLIGVQGERNLLIGGAGDDTLIGTSSSDHLFGDAGADRFEAMGGRNVMEGGAGGDTFVIDVKTMSMDTIRGWEAGDAVVFTNTGGVAPLTIVACI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF8</accession>
    <name>A0A2M9PEF8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">1,4-alpha-glucan branching enzyme</fullName>
            <ecNumber evidence="4">2.4.1.18</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05610</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>Transfers a segment of a (1-&gt;4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.</text>
            <dbReference type="EC" id="2.4.1.18"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.1.18" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000255">
        <property type="protein sequence ID" value="PJN95926.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003844">
        <property type="term" value="F:1,4-alpha-glucan branching enzyme activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102752">
        <property type="term" value="F:1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043169">
        <property type="term" value="F:cation binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004553">
        <property type="term" value="F:hydrolase activity, hydrolyzing O-glycosyl compounds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005978">
        <property type="term" value="P:glycogen biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd02855">
        <property type="entry name" value="E_set_GBE_prok_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.1180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006048">
        <property type="entry name" value="A-amylase/branching_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037439">
        <property type="entry name" value="Branching_enzy"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044143">
        <property type="entry name" value="GlgB_N_E_set_prok"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006047">
        <property type="entry name" value="Glyco_hydro_13_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004193">
        <property type="entry name" value="Glyco_hydro_13_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013780">
        <property type="entry name" value="Glyco_hydro_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017853">
        <property type="entry name" value="Glycoside_hydrolase_SF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014756">
        <property type="entry name" value="Ig_E-set"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00128">
        <property type="entry name" value="Alpha-amylase"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02806">
        <property type="entry name" value="Alpha-amylase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02922">
        <property type="entry name" value="CBM_48"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000463">
        <property type="entry name" value="GlgB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00642">
        <property type="entry name" value="Aamy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51445">
        <property type="entry name" value="SSF51445"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81296">
        <property type="entry name" value="SSF81296"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aamy" evidence="7">
        <location>
            <begin position="111"/>
            <end position="464"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile" evidence="6">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="6">
        <location>
            <position position="315"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000826"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009000"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRSR" id="PIRSR000463-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="SMART" id="SM00642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95926.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="584" mass="64985" checksum="49962ACEDE90E644" modified="2018-04-25" version="1">MGALPHDGGVAFRVWAPHAEAVHVTGTFTDWSEEGLPLAAEDNGVWAGNAPEASPGDEYRFLIRNGGETHSRIDPYARAVTNSVGNGIVTADPPLTDDFAPPPWNRMVIYEMHVGTFARTEESGGDLEEAADRFAHLKRLGVNAVQIMPVAEFAGDVSWGYNPAHIFAVESAYGGPEGLRAFVAAAHKAGIAVILDVVYNHFGPSDLDLWRFDGWSENDKGGIYFYNDWRSETPWGDTRPDYGRAEVRQFIRDNALFWLEQYNIDGLRWDMTLYIRSVRGDEGDPGDDLADGWTLAHWINTEIRERFPGHITIAEDLRNNAAMTSPDGAGFGAQWDSQFVHPIRAALIAMDDAERHMGTVAHAIQHHYNGDPFQRVIYTESHDEVANGRARIPHEIAPGDPGHWAAQKRSTLGAALVFTTPGVPMLFQGQEFLQGEWFKDDVPLDWDQSKEFRGVVRLYRDLIRLRLDRDGLTTGLTGRGVQVQRIDEAAKLVAFHRWEAGGPGDDVVVVANFSHEAREVYRIGFPRPGLWKLRLNSDWAGYSEDFADFPSHDVEAVEQDCDGMKWSAEVSVGGYTALVFSQDP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP0</accession>
    <name>A0A2M9PEP0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Two-component system response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05145</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000230">
        <property type="protein sequence ID" value="PJN95999.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="5"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95999.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13930" checksum="79D7AB80E6FC8450" modified="2018-04-25" version="1">MAQGSVLVVDDEPNIALSLEYLMKGQGFEVRVARDGEAALEALRERTPDVMLLDVMMPVRDGYEVCQTVRANPAWSGVRIIMLTARGRMIEQEKGLALGADDYITKPFSTREVVERVRQYMPVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PES9</accession>
    <name>A0A2M9PES9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HNH endonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000232">
        <property type="protein sequence ID" value="PJN95994.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002711">
        <property type="entry name" value="HNH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01844">
        <property type="entry name" value="HNH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0540">Nuclease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH" evidence="1">
        <location>
            <begin position="25"/>
            <end position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01844"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95994.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13091" checksum="E5B7E638C27B1DE6" modified="2018-04-25" version="1">MAAWPYCTTQWKKLRKAKLAHNPLCEICERRGLLVEAVAVDHFVPIRQGGAPFPELSGLLSLCEACHNEKSAGFDKHGGAAFRRRFKGFDADGNPIDPFDAWHGEGVLQGRGSPSSGTGGN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU4</accession>
    <name>A0A2M9PEU4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">BioY family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000218">
        <property type="protein sequence ID" value="PJN96032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="4882" checksum="C51B1CBED7877D81" modified="2018-04-25" version="1" fragment="single">MERSIAQIALFAAMIAALGLAPQITLGFGVPITAQSLGVMLAGAVLGAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY2</accession>
    <name>A0A2M9PEY2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04590</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000199">
        <property type="protein sequence ID" value="PJN96093.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="39"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="137"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="167"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="222"/>
            <end position="240"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="247"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="268"/>
            <end position="286"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="298"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="374"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="406"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="408"/>
            <end position="429"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96093.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="44358" checksum="AC1B30E01A3009B9" modified="2018-04-25" version="1">MQPSLTGLLVCGALLLAGHRLNGALIVGLIASLAFGSTAVATLTAIGGATPLIYTFFAGVLVLAAAARRSVWRDLGGVFGRLRSIWALCALTLYIAIGALLFPRLLLGRTSVFVLADSREGIVESTLAPVSGNITQTGYFGVSALTAIALCVLLLREDRLEQVRRGFMLFCLLHAGMGLIDLAGKLAGAGDLLAPLRTAGYAMLTEQVSAGFARVNGAFPEASAFSAASLACLAFCYTYWRHTGDRLARWLTLTLLGLLLLSTSSTAYGGLLVLGTAAAFGICRSLASDRLQGDDLRILGLLALGAALILALAVYSEAALEPVADLIDASLIGKASSASGQERAYWNLKSLQAFLDSGALGIGMGSSRASSWPVAVLSQLGLLGAVLMAALLVVIARGLAASRAGPTPGPAPSWPASAPPPWRASWPHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF57</accession>
    <name>A0A2M9PF57_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">MatC_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04190</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000179">
        <property type="protein sequence ID" value="PJN96161.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030676">
        <property type="entry name" value="CitT-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009827">
        <property type="entry name" value="MatC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42826">
        <property type="entry name" value="PTHR42826"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07158">
        <property type="entry name" value="MatC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="91"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="136"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="171"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="302"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="314"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="351"/>
            <end position="377"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="384"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="435"/>
            <end position="457"/>
        </location>
    </feature>
    <feature type="domain" description="MatC_N" evidence="2">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07158"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96161.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="459" mass="47500" checksum="14C3EA4851020193" modified="2018-04-25" version="1">MTPQLISIYALVAMFVVATIWPINMGVLAFVGAFLVGTLFAGQKAAEIIDGFPGSLFLTLVGITWLFALAQNNGTIDWLVRLAVRAVKGRIAAIPWIMFGISALLTSVGAVSPGAVAIIAPIALGFAFRYQFSPLLMGLMVVHGAQAGGFSPISIYGGITNGVVAKAGLPLSPMITFGASFFVNAAVALLLFLVLGGRKLMAARSVTPMAVDVPHIEIARAATGPQIFGDSEAEALSRQIGEEAGVDPNRLTADPRQDSPDGGLYQIVTLAGLALLATLVLVFKLDIGFVSLSIGLVLALWAPDMQKRAMSQVAWPEIMLITGVSTYVAVLEHMGTIDFVGHSVAGLGSPLLAALLLCFIGAVVSAFASSTAVLGSLIPLAVPFLQAGTGVSAIGFIAAMAVASTIVDVSPFSTNGALVLANAQGVDRQVFFRRLLGYGAAVTVIAPIVVWLLFVVLPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG5</accession>
    <name>A0A2M9PFG5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000141">
        <property type="protein sequence ID" value="PJN96287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="36025" checksum="FA673FC8C068821B" modified="2018-04-25" version="1">MAKRPEPSRADLLAHWIRSAPHKAASFATHIADFSLPLREEEFAAADRITNVVLPLGPYRNLTTMTAALFALHPQSVVLNHAAMRVFGTRFDPFDDLSPERWRAFKAASTRLLRHGRKSSYGGNVLYSHAFRGGALSRLYAERYGDVLLKPAATTLFWKDSMRFQNRFEAGDPTIEAWLAANDQTVFIFPVRDPMDCARSNRATGHWHHLVPKDQAEFGPILRRVLEALRWFRRLERQEPTRFWSFTEAELGAGFPARFAAFCRIAPDPAWLADAPQAIQVAPRGEHKPENRALYAELLDDIFADDPDMRARLEVFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFI7</accession>
    <name>A0A2M9PFI7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gamma-glutamyl-gamma-aminobutyrate hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03370</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000136">
        <property type="protein sequence ID" value="PJN96301.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016811">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011697">
        <property type="entry name" value="Peptidase_C26"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044668">
        <property type="entry name" value="PuuD-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43235">
        <property type="entry name" value="PTHR43235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07722">
        <property type="entry name" value="Peptidase_C26"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96301.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="26998" checksum="2C8C573C569C6699" modified="2018-04-25" version="1">MSRPVIGIIANAHLINDQYPAQAAGLHVIEAVAELTGAIPLIVPAVPRVGAISDLIEACDGFVLTGGRPNVHPSHWGEEPTEKHGAFDPDRDAVTLPLIRECVARGVPLFGICRGFQEMNVAFGGTLHPEIREIPGRMNHRMPPDGTIEEKFQHRHTVRLSEGGEFERILGAREVLVNSLHGQGILRKAERVVIEGWAPDETPEAIHVAGAQGFALGVQWHPEWNAAQDPVSRPLFQALGEAVRRRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL4</accession>
    <name>A0A2M9PFL4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03150</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96331.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014967971" evidence="1">
        <location>
            <begin position="38"/>
            <end position="155"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96331.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="16747" checksum="E5C6884159442DC4" modified="2018-04-25" version="1">MPSPARTAADLGRPAVTRRNVLAAGSLLGLAAAPALAAVEPEDPILPIYRCWCAVRAERMIAIHDAECAGIDVCQAVEDLSDREFAAFDELRELRPTSLAGIAAHAHALWVYGGPCSLEGTADWHEECRSWENELILAIWRAASGRDGFPREGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC1</accession>
    <name>A0A2M9PGC1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01705</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000062">
        <property type="protein sequence ID" value="PJN96576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00345">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50949">
        <property type="entry name" value="HTH_GNTR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="8"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12951" checksum="3FF7151F27C8DEED" modified="2018-04-25" version="1" fragment="single">MKPIASTPSRAEQVYFSIRDSICDGTLEAGTHLVQEDLAARLGVSRQPVQQAMALLRSDGLVLEQGARGLYVAPLDAEATVQRYEIRLCLDQLAARLTAERAARFPAVAEELRSRGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD4</accession>
    <name>A0A2M9PGD4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01505</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000054">
        <property type="protein sequence ID" value="PJN96613.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96613.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="352" mass="37611" checksum="7F5A9C979BA21055" modified="2018-04-25" version="1">MATIYDVATAAGVSPKTVSRVMNGDAPVNALTRERVEAAMGRLGYVPSVAARNMRSTRTGLVGLVTGAISGDPAAGGPAGLPDLQIVQGIQRVLAENGFTLLISDTGGDAARIPQLFRTLQEYRLEGLFYVADRHMRIEKPLAEHVGRLMLVNAFDTAGTPCVLPDDLDGQQKLTAALIASGHRRIGFLTLPQGFIAHGLRLEGYRQALAAAGLAFDPDLVIDADHGGGPEERAALEAAISRLLDLDVPPTALCCGNDRLAVTVYGLLRARGIDLPERMSVAGYDDYRVISETLYPQLTTVELPYGRMGEAAARLMLGELRGDAPLSPGIRVEVKGELRWRDSVRPLAPKVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI6</accession>
    <name>A0A2M9PGI6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">OMP_b-brl domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01285</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000044">
        <property type="protein sequence ID" value="PJN96650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011250">
        <property type="entry name" value="OMP/PagP_b-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027385">
        <property type="entry name" value="OMP_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13505">
        <property type="entry name" value="OMP_b-brl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56925">
        <property type="entry name" value="SSF56925"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OMP_b-brl" evidence="1">
        <location>
            <begin position="39"/>
            <end position="247"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13505"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="251" mass="26599" checksum="0C5E0018832B3749" modified="2018-04-25" version="1">MPGRTGCSSVGDRVEFRPARNRERYRSMKQASLTAVVAIAALAGGAGTASAQAFSLGEVYVKGFGGATWPSNFDTTLKEGGERIARPGFDYDTGYTLGAAVGAAFTPNVSMEIEYAYRRADVTITDRDDDDGSESANGDTSANAFMFNALYVFDGMGATGAVQPYLGGGIGAVNVETSVPGQNYDADTLLAYQLIGGVGYELNPNVSLYAEGRWFQTESARFDGPGGDNYDGEFETFDLLVGVRYVFSPAM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ8</accession>
    <name>A0A2M9PGJ8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphoribosylformylglycinamidine synthase subunit PurQ</fullName>
            <shortName evidence="1">FGAM synthase</shortName>
            <ecNumber evidence="1">6.3.5.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">Formylglycinamide ribonucleotide amidotransferase subunit I</fullName>
            <shortName evidence="1">FGAR amidotransferase I</shortName>
            <shortName evidence="1">FGAR-AT I</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Glutaminase PurQ</fullName>
            <ecNumber evidence="1">3.5.1.2</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">Phosphoribosylformylglycinamidine synthase subunit I</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">purQ</name>
        <name evidence="2" type="ORF">CNY89_01140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP + H2O + L-glutamine + N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamide = 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine + ADP + H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:17129"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:147286"/>
            <dbReference type="ChEBI" id="CHEBI:147287"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.5.3"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="EC" id="3.5.1.2"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="1">Part of the FGAM synthase complex composed of 1 PurL, 1 PurQ and 2 PurS subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.5.3" evidence="1"/>
    <dbReference type="EC" id="3.5.1.2" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000039">
        <property type="protein sequence ID" value="PJN96677.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00128"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004359">
        <property type="term" value="F:glutaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004642">
        <property type="term" value="F:phosphoribosylformylglycinamidine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00421">
        <property type="entry name" value="PurQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010075">
        <property type="entry name" value="PRibForGlyAmidine_synth_PurQ"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001586">
        <property type="entry name" value="FGAM_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01737">
        <property type="entry name" value="FGAM_synth_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="1" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="1" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Nucleophile" evidence="1">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="194"/>
        </location>
    </feature>
    <feature type="active site" evidence="1">
        <location>
            <position position="196"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00421"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96677.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="227" mass="23877" checksum="D36D6DF707506107" modified="2018-04-25" version="1">MRAGVVVFPGSNCDRDLAVALRRAGADVTMVWHKETALPEGLDLVGVPGGFSFGDYLRCGAIAARAPIMRAVADFAVRGGMVLGVCNGFQVLIEAGLLPGALMRNSGLKFLCAPVALRVGSPDSPFTARYRRSEQVTFPVAHHDGNYIADPETLARLEAEDLVAFRYVDNPNGSMNGIAGILSPNRRVLGLMPHPERAVDATHGGVDGERLFAGLVEATPAGALQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ3</accession>
    <name>A0A2M9PGQ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Type III glutamate--ammonia ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">glnT</name>
        <name evidence="5" type="ORF">CNY89_00825</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamine synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000027">
        <property type="protein sequence ID" value="PJN96727.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004356">
        <property type="term" value="F:glutamate-ammonia ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006542">
        <property type="term" value="P:glutamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036651">
        <property type="entry name" value="Gln_synt_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008146">
        <property type="entry name" value="Gln_synth_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027303">
        <property type="entry name" value="Gln_synth_gly_rich_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017536">
        <property type="entry name" value="Glutamine_synthetase_typeIII"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00120">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01230">
        <property type="entry name" value="Gln-synt_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54368">
        <property type="entry name" value="SSF54368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03105">
        <property type="entry name" value="gln_synth_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00181">
        <property type="entry name" value="GLNA_ATP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Gln-synt_C" evidence="4">
        <location>
            <begin position="97"/>
            <end position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023231"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU000384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM01230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96727.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="435" mass="47696" checksum="3960F945461EA4AA" modified="2018-04-25" version="1">MTLDLADYAADRGVKYFMISYTDLFGGQRAKLVPAQAIAEMQRDGAGFAGFATWLDLTPAHPDVFALPDPASVVQLPWKKDVAWVAADCVMEGAPIAQAPRVVLKRLVAEAAEAGLRVKTGVEAEFFLVTPDGRAISDPADTAEKPCYDQQAVMRRYDVIAEICDAMLELGWKPYQNDHEDANGQFEMNWEFDDALATADKHSFFKFMVKSIAEKHGLRATFMPKPFKGLTGNGCHAHVSVWDLAGEANAFADKTRPFGLSDQGRTFLGGIMRYASALAAITNPTVNSYKRINAPRTVSGATWAPNSVTWTGNNRTHMVRVPGPGRFELRLPDGAANPYLLQAIIIAAGLSGVRAQADPGPHSDIDMYRDGHTIAGAPKLPLNLLDALRAYEEDEGLQQVLGTEFSTAYLKLKHQEWNTYCAQFTAWEHDTTLDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR7</accession>
    <name>A0A2M9PGR7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Alpha-glucoside ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00955</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000032">
        <property type="protein sequence ID" value="PJN96712.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="57"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="147"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="203"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="305"/>
            <end position="327"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="110"/>
            <end position="326"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96712.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="335" mass="37639" checksum="EA5CE1696CCF97D3" modified="2018-04-25" version="1">MYEQLAGAAVTIVIGVAGAFAYFYFSNWLLDRLLPARGVAPEQASRNILRAGLIRPWLFLFPALIALGVYLIYPVFDSIRLSVHDRSGENFVGLANFRWMFGDEGFRESIFNNFLWLLFVPALSTVFGLIAAALTDRIWWGNIAKSLIFMPMAISFVGAAVIWKFIYDYRSGDQPQIGLLNAIWVGMGGEPQAWIAVPFWNNFFLMIILVWIQTGFAMVILSGALRGIPEETLEAAVLDGASPLQIFFKIKVPQIWGTIAVVWTTITITVLKVFDIVLAMTNGQWKTQVLANLMFDWMFRGGGDFGRGAAIAIVIMVLVIPIMIWNIRNVRRENR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGT3</accession>
    <name>A0A2M9PGT3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000023">
        <property type="protein sequence ID" value="PJN96746.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018678">
        <property type="entry name" value="DUF2160_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09928">
        <property type="entry name" value="DUF2160"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="47"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="70"/>
            <end position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96746.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9727" checksum="EFEF470498FF56DC" modified="2018-04-25" version="1">MAWTTPTAVFFACIALMLVGMTALQIVWPTYERKGFLPIPTTRGDRLFIALITAAFIHLGFVHGTEMETFWLPLGVSAVVGLIILRFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU2</accession>
    <name>A0A2M9PGU2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Chitooligosaccharide deacetylase</fullName>
            <ecNumber evidence="5">4.1.1.97</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">Nodulation protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_00700</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Is involved in generating a small heat-stable compound (Nod), an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in various plant protoplasts.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+) = (S)-allantoin + CO2</text>
            <dbReference type="Rhea" id="RHEA:26301"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15678"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:58639"/>
            <dbReference type="EC" id="4.1.1.97"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Purine metabolism; urate degradation; (S)-allantoin from urate: step 3/3.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the polysaccharide deacetylase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.97" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000021">
        <property type="protein sequence ID" value="PJN96753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00394">
        <property type="reaction ID" value="UER00652"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016831">
        <property type="term" value="F:carboxy-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016810">
        <property type="term" value="F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000255">
        <property type="term" value="P:allantoin metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006144">
        <property type="term" value="P:purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019628">
        <property type="term" value="P:urate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd10977">
        <property type="entry name" value="CE4_PuuE_SpCDA1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3330.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011330">
        <property type="entry name" value="Glyco_hydro/deAcase_b/a-brl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002509">
        <property type="entry name" value="NODB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018020">
        <property type="entry name" value="OHCU_decarboxylase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017580">
        <property type="entry name" value="OHCU_decarboxylase-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036778">
        <property type="entry name" value="OHCU_decarboxylase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017625">
        <property type="entry name" value="PuuE/SpCDA1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09349">
        <property type="entry name" value="OHCU_decarbox"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01522">
        <property type="entry name" value="Polysacc_deac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF158694">
        <property type="entry name" value="SSF158694"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88713">
        <property type="entry name" value="SSF88713"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03164">
        <property type="entry name" value="UHCUDC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03212">
        <property type="entry name" value="uraD_N-term-dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51677">
        <property type="entry name" value="NODB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0210">Decarboxylase</keyword>
    <keyword evidence="10" id="KW-0456">Lyase</keyword>
    <keyword evidence="7" id="KW-0536">Nodulation</keyword>
    <keyword evidence="8" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NodB homology" evidence="12">
        <location>
            <begin position="61"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004754"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00010973"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012257"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00020071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022793"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00032976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS51677"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="466" mass="51640" checksum="EE7E7FAED1CE3B87" modified="2018-04-25" version="1">MQGYGGRPPAADWPGGARVAVQFVLNYEEGGENCILHGDAASEAFLSEITGAQPWPGLRHWNMESIYEYGARAGFWRVHEMFTARKIPVTIYGVASALARSPAQVTAMQEAGWEIASHGLKWVDYRDASPEAETADMVEAIRLHTEVTGERPLGWYTGRCSVNTVDIVSEEGGFAYISDTYDDDLPYWREHAGRQQLIIPYTLDANDMRFAIQAGYTHGDDFYQYLKDAFDTLYAEGEAGAPKMMSVGLHCRLIGRPGRALALAKFLDYARSHDRVWFPTRLAIARHWAERHPAPPLGERPSTMDKGAFVAKFGGVFEHSPWIAERAWELELGPAHDTADGLHNALARAFRSASETERMGVLTAHPDLAGKLAAARRLTAESTAEQAGAGLDSLTDAERAQFTALNDAYVAKFGFPFIIAVRGLDKTDILEAFERRIANSRDEEFATACRQVERIALLRLRDMLPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX8</accession>
    <name>A0A2M9PGX8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glycosyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_00390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000011">
        <property type="protein sequence ID" value="PJN96808.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96808.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="30917" checksum="A4FAC82C644EAA86" modified="2018-04-25" version="1">MKIAVGCVKWGTRFGADYVNVLYRAVQEQLGLPHRFVCLTNQPEGIDPGVQTMPVPEFGVPEEEWLKRGCWPKVALFAPGVFEDDEIVLYLDLDLLVVGDLKPFIELVRDRAAFYTLREWNPTLVRLLPVRFRPDRGSQGSVYVWRAGEQRHVFADFTSRVEEVRATYWSDRFYLPKIAKNVRYLPYDWCLSFKNHCLAPWPLNLLRPEARIPEGAKIIVFHGKPRPMDVMGPPGQRWGSKRRSGDQPVPWVRDYWLRHGGRLPDAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY3</accession>
    <name>A0A2M9PGY3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Abhydrolase_9 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000014">
        <property type="protein sequence ID" value="PJN96796.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027787">
        <property type="entry name" value="Alpha/beta-hydrolase_catalytic"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10081">
        <property type="entry name" value="Abhydrolase_9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_9" evidence="1">
        <location>
            <begin position="20"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96796.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="293" mass="32374" checksum="DB2102155B1FA974" modified="2018-04-25" version="1">MRSRLASSQASMPDWSAFRGGFQRKALVVMVPVGTGWMDPAGQDTLDYVMGGDVATVAVQYSYLTSALALWAHPEAGVDQARELFNLVYDHWTRLPEDARPEFYVHGLSQGAFNSQATLPILDLLADPIDGAMWTGSPFFSPYWRLARENRNPGSPAWRPLAGNGSLVRTMNQFGGLEGDFAPWGPIRMVFLNYGSDAIVVFNPASAWRPPDWMARPRAPDVALELRWFPLVTTVQLGLDMTISLHVPGFGHSYVARDYIDAWAATLDPEGWTEARAEALKAIFAGRPVEEGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH13</accession>
    <name>A0A2M9PH13_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Transcription termination/antitermination protein NusA</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">nusA</name>
        <name evidence="10" type="ORF">CNY89_00265</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Participates in both transcription termination and antitermination.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Monomer. Binds directly to the core enzyme of the DNA-dependent RNA polymerase and to nascent RNA.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the NusA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000007">
        <property type="protein sequence ID" value="PJN96830.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006353">
        <property type="term" value="P:DNA-templated transcription, termination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0031564">
        <property type="term" value="P:transcription antitermination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1480.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00945_B">
        <property type="entry name" value="NusA_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010995">
        <property type="entry name" value="DNA_repair_Rad51/TF_NusA_a-hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004087">
        <property type="entry name" value="KH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015946">
        <property type="entry name" value="KH_dom-like_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025249">
        <property type="entry name" value="KH_dom_NusA-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009019">
        <property type="entry name" value="KH_sf_prok-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030842">
        <property type="entry name" value="NusA_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036555">
        <property type="entry name" value="NusA_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013735">
        <property type="entry name" value="TF_NusA_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010214">
        <property type="entry name" value="Tscrpt_termin_fac_NusA_C_rpt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010213">
        <property type="entry name" value="Tscrpt_termination_fac_NusA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22648">
        <property type="entry name" value="PTHR22648"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13184">
        <property type="entry name" value="KH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08529">
        <property type="entry name" value="NusA_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00322">
        <property type="entry name" value="KH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47794">
        <property type="entry name" value="SSF47794"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54814">
        <property type="entry name" value="SSF54814"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69705">
        <property type="entry name" value="SSF69705"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01953">
        <property type="entry name" value="NusA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01954">
        <property type="entry name" value="nusA_Cterm_rpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="6 7" id="KW-0804">Transcription</keyword>
    <keyword evidence="3 7" id="KW-0889">Transcription antitermination</keyword>
    <keyword evidence="5 7" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="1 7" id="KW-0806">Transcription termination</keyword>
    <feature type="domain" description="S1 motif" evidence="9">
        <location>
            <begin position="141"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="522"/>
            <end position="542"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022814"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00945"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96830.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="542" mass="60302" checksum="F9785EB4F3B67452" modified="2018-04-25" version="1">MSVTSANRLELLQIADAVAREKMIDPSLVIEAMEDSLGKAARSRYGAEYDIRAKLDAKTGDLTMTRYRHVVEEVENFFTEITLADAKAIKPDAQLGDYLTDALPPMDFGRIAAQSAKQVIMQKVREAERLRQYEEFKDRAGTIINGVVKRTEYGNVIVDVGRGEAILRRDQLIQREAFRNGDRVRALVRDVRHETRGPQIFLSRTAPEFLAELFKMEVPEIYDGVIEIKAVARDPGSRAKMGVISYDNSIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWNQDPATFLVNALQPAEVSKVVFDEDSERIEVVVPDEQLSLAIGRRGQNVRLASQLTGFDIDIMTESQESERRQAEFAERTQLFMDTMNVDEMVAQLLVAEGFATLEEIAYVDLDDLISIDGFDDTTAEELQARARESLDEINAKAIERAKELGVEQSLFDFEGLSPQMIQALAEDGIKTLEDFATCADWELAGGYTSVDGKRVKDTGLLEKFDMSLEEAQTLVMNARVQLGWVEAAEIEAAAEAETEEADGPEAETVEKQD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P479</accession>
    <name>A0A2M9P479_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30710</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004896">
        <property type="protein sequence ID" value="PJN92323.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92323.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7393" checksum="F782557E9655BDA4" modified="2018-04-25" version="1" fragment="single">NDSGDIDVADITALLGRNESGKSNLLLGLRSLNPAEGFTALNPIKDFPRDRRLEECGDYTRVVSTEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A9</accession>
    <name>A0A2M9P4A9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30255</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004733">
        <property type="protein sequence ID" value="PJN92377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="36"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7576" checksum="30960BC64BE33358" modified="2018-04-25" version="1" fragment="single">VHGHRHARGGHLPVLLQDHPGQRGLGRAHPQPAQRARRTWASTCARGTPSCSPPRPSRATRSRSRASSTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C9</accession>
    <name>A0A2M9P4C9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30130</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004687">
        <property type="protein sequence ID" value="PJN92394.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92394.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6870" checksum="0592230BFAC60FC5" modified="2018-04-25" version="1" fragment="single">QVKALMEGFESRSPQQAFRKETWDSIRDVYIGKGAKNGYWRLLLTAQPTEAVAEPAEEATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D6</accession>
    <name>A0A2M9P4D6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30010</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004644">
        <property type="protein sequence ID" value="PJN92406.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="37"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92406.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4117" checksum="A71A2B24CDA2E645" modified="2018-04-25" version="1" fragment="single">MDRKTAAETCGMDRQTLRDWVHRNAEGLAGLSNQRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J1</accession>
    <name>A0A2M9P4J1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004471">
        <property type="protein sequence ID" value="PJN92457.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92457.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8402" checksum="D8F7E75770A933E7" modified="2018-04-25" version="1" fragment="single">MSQDGLYMGGLKNVTIEDNYFGDYLSADPSDPTNKESIQFYTNGSTAPSEGVTIRGNTFSSEDYRQNILIFNELY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J2</accession>
    <name>A0A2M9P4J2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004436">
        <property type="protein sequence ID" value="PJN92464.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92464.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8549" checksum="42DE5078A706DD0A" modified="2018-04-25" version="1" fragment="single">VEPQQIPGDLATATVGVDPYEQAQIIEQRIMTRENLVELADRLGFYADAPEEMTANAIAGDLITRIEFIGFEPDITR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4J4</accession>
    <name>A0A2M9P4J4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29495</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004461">
        <property type="protein sequence ID" value="PJN92462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8868" checksum="C54FAD96E32DE41B" modified="2018-04-25" version="1" fragment="single">NLAYVMPELDAAARDRIARETGDNFGRSFLEIFNVPKFRRRIEANLAYVMPELDAAARDRIARETGDNFGRSFLEIF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4X5</accession>
    <name>A0A2M9P4X5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004032">
        <property type="protein sequence ID" value="PJN92592.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92592.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="9138" checksum="F96DCF460BC4AE7B" modified="2018-04-25" version="1" fragment="single">SRWWMALVEQNVMRRLCGEIRRQEGLPGFDEIPLTAAEAEAFWTLHGGIFYYGVRREAFVAQSVDCLLAALLAAARAALPVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P503</accession>
    <name>A0A2M9P503_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003916">
        <property type="protein sequence ID" value="PJN92634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10210" checksum="6C8A2632E79E6C75" modified="2018-04-25" version="1" fragment="single">TLRIEAEDAEDLNFVPDLDSTGASEYLKLLGWTIDKVEIETAEHVYDTDFGYWRDADRGYSQIVLSLDVTRTRSPVAVDDFLGFAFAFLI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P511</accession>
    <name>A0A2M9P511_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004013">
        <property type="protein sequence ID" value="PJN92598.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="33"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="67"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92598.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9445" checksum="14BF69B1C485208F" modified="2018-04-25" version="1" fragment="single">MATPSARVRDAILDLRAFRRRHDVAHVARQPNWAQWILLALVVVLVESSVNALLFAKVMSQGFAGGLALAVIISAANAAVATLTTYFA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A8</accession>
    <name>A0A2M9P5A8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27430</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003728">
        <property type="protein sequence ID" value="PJN92698.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92698.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6261" checksum="FB3839F7E3D12E80" modified="2018-04-25" version="1" fragment="single">RAALPGLSRSETPLGAWLRGLSERAHPNVVVVALAAKLARIAWAVLRRGADYGRRTAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E0</accession>
    <name>A0A2M9P5E0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27110</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003636">
        <property type="protein sequence ID" value="PJN92735.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044000">
        <property type="entry name" value="Phage_tube_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18906">
        <property type="entry name" value="Phage_tube_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92735.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9246" checksum="745EA1071483EB1E" modified="2018-04-25" version="1" fragment="single">MARAQGARALMALAFETTYGTPPASGFTRMPFASTSLGAEQPLLNSELLGYGRDPLAPIKDAVTADGDVVVPLDAEAFGFWLKAAFGAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5H6</accession>
    <name>A0A2M9P5H6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003473">
        <property type="protein sequence ID" value="PJN92787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="66"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7183" checksum="2A9E0AB05B6CBA23" modified="2018-04-25" version="1" fragment="single">MRHKNILVEDNYIRSVNTHGVTVTHADGVTVRNNTVTLNGDQGLTQTPLINVSGTSQNVEIIGNRV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L5</accession>
    <name>A0A2M9P5L5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Metal ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_26065</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003314">
        <property type="protein sequence ID" value="PJN92836.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140359">
        <property type="term" value="F:ABC-type transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1560.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011527">
        <property type="entry name" value="ABC1_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036640">
        <property type="entry name" value="ABC1_TM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039421">
        <property type="entry name" value="Type_1_exporter"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24221">
        <property type="entry name" value="PTHR24221"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00664">
        <property type="entry name" value="ABC_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF90123">
        <property type="entry name" value="SSF90123"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50929">
        <property type="entry name" value="ABC_TM1F"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="58"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="5">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50929"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92836.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="9020" checksum="2B2286995CE2F434" modified="2018-04-25" version="1" fragment="single">MKSLKNDRDTEANQKAVDSLLNYETVKYFSAEEREAQRYDHSMEGYAEAATKTAISLAWLNAGQTFIITAGLVIVMVMAAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5N7</accession>
    <name>A0A2M9P5N7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003229">
        <property type="protein sequence ID" value="PJN92864.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92864.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="11886" checksum="39A26F128803E782" modified="2018-04-25" version="1" fragment="single">VELAMQRAEQVAAWLMRFPVGTKDGVAYGKGEPLSRSQMEGLFLSIYREQGDAAAALLPYGLERLTPEAGPVIAPTVIMLPRAGRRGGGAAALWAGAADAGGRACDRADRHHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z4</accession>
    <name>A0A2M9P5Z4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25035</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003001">
        <property type="protein sequence ID" value="PJN92953.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92953.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13851" checksum="C213B4DA3147E4A9" modified="2018-04-25" version="1" fragment="single">TNWIDYLISLSPVLQTAIWACVAILFAWVIKEPIRHLAERLVERVGQGDKIITPYFSIERQEQLNQLDYIQTVSRGEDASTIIRTENSENPPLPRRNSKRIGNQYMIKSEHILGARYNAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P641</accession>
    <name>A0A2M9P641_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002924">
        <property type="protein sequence ID" value="PJN92989.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="53"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="53"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="75"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92989.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10800" checksum="C12F6280CDDCF0A2" modified="2018-04-25" version="1" fragment="single">NDPGRTSGGRPRKADKREIVEAILYFLRAGCACGSCRTTSHLGRRSTTTCAVGSEKASGQACSTPSSWPTGSRRAGKPRPRRRSSTAKASGRPIKRGLQRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6D2</accession>
    <name>A0A2M9P6D2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21520</name>
        <name evidence="1" type="ORF">CNY89_23800</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002637">
        <property type="protein sequence ID" value="PJN93092.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002061">
        <property type="protein sequence ID" value="PJN93347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93092.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6235" checksum="D0B11FB86C91030F" modified="2018-04-25" version="1" fragment="single">MPKRRRARYPSDLTDSQWAMIAPMIPDATSGGRPRKADKREIVEAILYFLRAGCA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6G1</accession>
    <name>A0A2M9P6G1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002609">
        <property type="protein sequence ID" value="PJN93105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="1">
        <location>
            <begin position="2"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="15356" checksum="D198BCFB337F8467" modified="2018-04-25" version="1" fragment="single">VEVFAAYVAYNDHEIGRVIQHFKDLGRYDNTLIIYQNGDNGTSAEGGPEGTFSEVAFFNGVAPSIDTQMKFYDAWGTEFAYNHMSAGWSWAFDTPFDWFKQNASRLGGINQNMVVTWPKGIKDKGGLRNQFMHVID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6H9</accession>
    <name>A0A2M9P6H9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_23005</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002424">
        <property type="protein sequence ID" value="PJN93174.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="120"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="143"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93174.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="143" mass="15292" checksum="B4496B584F665678" modified="2018-04-25" version="1" fragment="single">MKTVREGENGWTCMKPGTNPMCADAGGLEWMHALMSKGETPHKLGFIYMLLGDGGASNIDPFAAEETPDNNWIVSGPHVMIVGTEAKSLLEGYPRAQWRIPQSHTSCGLGRLRTSDAVDAVGRTAHGPGAAPKPQRPSGRPLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J4</accession>
    <name>A0A2M9P6J4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS630 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002530">
        <property type="protein sequence ID" value="PJN93130.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93130.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="37" mass="4214" checksum="7F2FC18B4D3B5BE6" modified="2018-04-25" version="1" fragment="single">AEVRALLRAEPGLSDREIARRVRVSPQTVGNWRRRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L2</accession>
    <name>A0A2M9P6L2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Two-component sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002404">
        <property type="protein sequence ID" value="PJN93182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HATPase_c" evidence="1">
        <location>
            <begin position="22"/>
            <end position="128"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="139" mass="14477" checksum="52BD3C3646A54C24" modified="2018-04-25" version="1" fragment="single">ARAAGADRFDLVMSDTLVLSDLDPDTFGILCRNLVENALKHGASDTVVKVGLTAEGVLTVANECHAIAPVTLERLTSRFERGSGAGVGSGLGLTIVQTIAERADCTFTLSSPIGGQETGLEARLDVSGGTTRRLPERIP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P717</accession>
    <name>A0A2M9P717_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Biopolymer transporter ExbB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21640</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002086">
        <property type="protein sequence ID" value="PJN93333.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93333.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6525" checksum="DC47EC590BA47AD0" modified="2018-04-25" version="1" fragment="single">ATEDAGRLDAETRARLRSIDTQVLRILEDMAAGRQDLVAEMRSDISGLAEALRNIARSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A3</accession>
    <name>A0A2M9P7A3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DEAD/DEAH box helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001984">
        <property type="protein sequence ID" value="PJN93388.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93388.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7561" checksum="FD4E6B55F14201C5" modified="2018-04-25" version="1" fragment="single">MLGEGFDHPKLSVAAIFRPFRSLGPYLQFVGRIMRVVVQNSPGHPDNLGHIVTHLGMNLDARFQEFK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7C2</accession>
    <name>A0A2M9P7C2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ParB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001954">
        <property type="protein sequence ID" value="PJN93408.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ParB" evidence="1">
        <location>
            <begin position="3"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02195"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93408.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15936" checksum="A40E488333871588" modified="2018-04-25" version="1" fragment="single">MGDIEGLAKSIEALGLLQPIGITHDNVLIFGERRLRACRDILGWTEIETRVLDMPRIVVGENAENEVRKDFTPSERVAIAQAIASEFEERRGRPSAENPQKFAEIARGQETRDFAAKKAGFGNRETFRQAEHVVQHAEPELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P896</accession>
    <name>A0A2M9P896_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_18555</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the VirD4/TraG family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001477">
        <property type="protein sequence ID" value="PJN93764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003688">
        <property type="entry name" value="TraG/VirD4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02534">
        <property type="entry name" value="T4SS-DNA_transf"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="41"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="97"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="243"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="243" mass="25414" checksum="B3784069FDBFEA66" modified="2018-04-25" version="1" fragment="single">MTRRGQDILLGGGVGLMVGVLPGLLAAGAFLPVMTRRGQDILLGGGVGLMVGVLPGLLAAGAFLTWRLGGDLRQIDLLTWYQLLPAAAGWPGLSKTAGLIAIGVALAFMLAGVVLLWRSSLSLYGTARWAEPDELKRAELLARRLADVRGPIWGKLGGPKSRAAYLSSAGIVHSLVAAPTGAGKGVGIVIPTLLTYAGSTVVLDVKGENYAKTAWRRQALGDRVFKFAPYAKDRRSHALQPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8A8</accession>
    <name>A0A2M9P8A8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Ribokinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001487">
        <property type="protein sequence ID" value="PJN93753.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002139">
        <property type="entry name" value="Ribo/fructo_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00990">
        <property type="entry name" value="RIBOKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="1">
        <location>
            <begin position="2"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93753.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5266" checksum="9643DED69F7F8F26" modified="2018-04-25" version="1" fragment="single">MIVVFGSLNADLIFAMQDLPEPGQTLLARSLRIEPGGKGANQALAAARDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8S8</accession>
    <name>A0A2M9P8S8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17470</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001327">
        <property type="protein sequence ID" value="PJN93937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025915">
        <property type="entry name" value="Phage_gp49_66"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13876">
        <property type="entry name" value="Phage_gp49_66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11493" checksum="79E45FE828F9A62A" modified="2018-04-25" version="1">MTDSLRITDDASRAVQKTPNRISLDSMLAKVVSEDYLNPPTIPHMTICILVLANGFSLVGKTAPADPENFDAELGRRFAKEDAIRQMWPLEAYALRERMTVGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V4</accession>
    <name>A0A2M9P8V4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptidase C14</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001297">
        <property type="protein sequence ID" value="PJN93975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008745">
        <property type="term" value="F:N-acetylmuramoyl-L-alanine amidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009253">
        <property type="term" value="P:peptidoglycan catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06583">
        <property type="entry name" value="PGRP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036505">
        <property type="entry name" value="Amidase/PGRP_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002502">
        <property type="entry name" value="Amidase_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01510">
        <property type="entry name" value="Amidase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55846">
        <property type="entry name" value="SSF55846"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="N-acetylmuramoyl-L-alanine amidase" evidence="1">
        <location>
            <begin position="24"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01510"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14335" checksum="64B9FD5F8CA2B668" modified="2018-04-25" version="1" fragment="single">MRRFLDAGLEEFVDLVETFDFTRTVTEVHLHHSWRPRQAEFLGRASLQDMWRDHTENQRWLDLAQHVTVDPKGRIWLGRNFNRAPASARGFNGNDRAGPFMVVMIGDFAAGETPTKAQLAATLGAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V6</accession>
    <name>A0A2M9P8V6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Peptide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_17380</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001315">
        <property type="protein sequence ID" value="PJN93949.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015833">
        <property type="term" value="P:peptide transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013563">
        <property type="entry name" value="Oligopep_ABC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08352">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01727">
        <property type="entry name" value="oligo_HPY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 5" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0813">Transport</keyword>
    <feature type="domain" description="oligo_HPY" evidence="4">
        <location>
            <begin position="29"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93949.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13637" checksum="AF3971CD3A3F7360" modified="2018-04-25" version="1" fragment="single">LTYLFISHDLSMVRHLATRVAVMYLGRIMELAPREALYAEPLHPYTQALISAVPSPDPEVEARRRRIILTGDVPSPAKPPSGCVFSTRCPKVFDRCRVEPPPLHDLGSGRFAACHLVEPPGAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P946</accession>
    <name>A0A2M9P946_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GNAT family N-acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001228">
        <property type="protein sequence ID" value="PJN94064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008080">
        <property type="term" value="F:N-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000182">
        <property type="entry name" value="GNAT_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13302">
        <property type="entry name" value="Acetyltransf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51186">
        <property type="entry name" value="GNAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N-acetyltransferase" evidence="1">
        <location>
            <begin position="1"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9658" checksum="1D164ACC24F49B2F" modified="2018-04-25" version="1" fragment="single">WRLARAHWGQGYATEAARGWIDWGFAALDLPEIVAFVVPENRASQAVMTRLGMTRDPARDFEHPALPEGHRLRPHWLFSLARPGV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F0</accession>
    <name>A0A2M9P9F0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16200</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001167">
        <property type="protein sequence ID" value="PJN94151.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94151.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8203" checksum="8EA62B1E470F3617" modified="2018-04-25" version="1">MPLGFLRHRLKRAALEPQERVHMPQALASVPDDMRSQVQERPVDGLGLEAAEFGSHGPKLADSGRWREGGAWCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9G7</accession>
    <name>A0A2M9P9G7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16170</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001162">
        <property type="protein sequence ID" value="PJN94159.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="2"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94159.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13333" checksum="5161BCCD61A0D979" modified="2018-04-25" version="1" fragment="single">MRLLYVEDNARLASNTAASLRKSSFVVDAVSTGEDAIHAAKSFAYDAIVLDLGLPDIDGLAVLERIRAARPGTPVVICTARDRLEDRIQGLNAGSDDYLVKPFEVDELVARLRAVLRRPGGALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9H4</accession>
    <name>A0A2M9P9H4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15965</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001137">
        <property type="protein sequence ID" value="PJN94194.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="40"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="70"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="95"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="131"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="199"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="235"/>
            <end position="256"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="1"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="267"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94194.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="267" mass="28493" checksum="32517674E2C8CF04" modified="2018-04-25" version="1" fragment="single">MIPVLRSSWPLLLGVLLLLLGNGMQGTVLGLRGALEGYGAQTMSWVMSAYFAGFLLGARLAPRMIRRVGHVRVFAALGATISAAFVIYAEAVHPLAWMALRFIVGLCFCGVYVTAESWLNEASSNETRGQALSLYMIAQMIGIIAAQGLVTLADPAGHRLFVVMSVLVSLSFLPILLSAGQAPAFRSAAPMTLRMLFRISPLGCVGTFLLGAVYAGLFSMPAVWGAERGLATNQIAGFVAAIYLGGLVALFPLGWLSDRMERRVLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J8</accession>
    <name>A0A2M9P9J8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF1013 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001140">
        <property type="protein sequence ID" value="PJN94189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010421">
        <property type="entry name" value="TrcR"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06242">
        <property type="entry name" value="DUF1013"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="227"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="79"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="27283" checksum="44A98CAD278D6A21" modified="2018-04-25" version="1" fragment="single">MTLPLMHKATAVWLVDNTTLTFPQIAEFCGLHELEVNGIADGEVAQGIKGFDPIVNRQLTPEEIRRCERDPKARLRLMRNPAAEGETKRKGPRYTPLSKRQERPAAIAWLVKFHPELSDGAISKLVGTTKPTIESIRERSHWNIANIVPVDPVALGMCRQSELDAAVAKAVARAVQPGSVMTDDERMRLVSTEQSLSMEPEARPHPAMSGLESFGRRRAHAPRLDRAVALHGARGPAASGDVGSRELR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W1</accession>
    <name>A0A2M9P9W1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Jacalin-type lectin domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15190</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001047">
        <property type="protein sequence ID" value="PJN94324.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.100.10.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001229">
        <property type="entry name" value="Jacalin-like_lectin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036404">
        <property type="entry name" value="Jacalin-like_lectin_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01419">
        <property type="entry name" value="Jacalin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51101">
        <property type="entry name" value="SSF51101"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51752">
        <property type="entry name" value="JACALIN_LECTIN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Jacalin-type lectin" evidence="1">
        <location>
            <begin position="1"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51752"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94324.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11341" checksum="7532DFFF0642808C" modified="2018-04-25" version="1" fragment="single">SQDEIVTCIEAGCDRDNGTVRKIAIQTNKRRYPRERHFGRSDVAEFHNLAAPRIVGFHGFKSALVHCIGPCCLSLSQDTVSPDFLLALEPELFPDRRYGPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA06</accession>
    <name>A0A2M9PA06_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14915</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001021">
        <property type="protein sequence ID" value="PJN94370.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.559.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001078">
        <property type="entry name" value="2-oxoacid_DH_actylTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023213">
        <property type="entry name" value="CAT-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00198">
        <property type="entry name" value="2-oxoacid_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="2-oxoacid_dh" evidence="1">
        <location>
            <begin position="22"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00198"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94370.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="26443" checksum="6A3B82EC13070ED5" modified="2018-04-25" version="1" fragment="single">AAPAPPAAPNAEAIRKLYEGRDFEEVKLDGMRRTVAARLTEAKATIPHFYLRRDIELDALLDLRGRLNADLADRGVKLSVNDFVIKACALALQQVPDCNAVWAGDRVLRLRASDVAVAVAVEGGLFTPVLRDAEVKSLSAISAEMKDLAARARSRKLAPQEYQGGGFAISNLGMMGIDSFDAVINPPQASILAVGAGRRAPIVRGDAIVPATVMTATLSVDHRVIDGALGAEFLAAIKALIERPLAMLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA31</accession>
    <name>A0A2M9PA31_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cobalt transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001014">
        <property type="protein sequence ID" value="PJN94384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012666">
        <property type="entry name" value="CbtA_put"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09490">
        <property type="entry name" value="CbtA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="72"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10048" checksum="FBA028350A873B4D" modified="2018-04-25" version="1" fragment="single">MNALRNMLFVAALAGLAAGVVMTLLQFFGTVPLILQAETFEVAAPAHENAPGAAEHAHDPEAWEPADGFQRMGLTAAANLATAIGFGLLLVAASEFAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA39</accession>
    <name>A0A2M9PA39_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">50S ribosomal protein L32</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5 7" type="primary">rpmF</name>
        <name evidence="7" type="ORF">CNY89_14775</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bL32 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001007">
        <property type="protein sequence ID" value="PJN94397.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015934">
        <property type="term" value="C:large ribosomal subunit"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00340">
        <property type="entry name" value="Ribosomal_L32"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002677">
        <property type="entry name" value="Ribosomal_L32p"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044957">
        <property type="entry name" value="Ribosomal_L32p_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011332">
        <property type="entry name" value="Ribosomal_zn-bd"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35534">
        <property type="entry name" value="PTHR35534"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01783">
        <property type="entry name" value="Ribosomal_L32p"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF57829">
        <property type="entry name" value="SSF57829"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01031">
        <property type="entry name" value="rpmF_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008560"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00340"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94397.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7455" checksum="BE12942E33608876" modified="2018-04-25" version="1">MAVPKSKVTRSKRGMRRSHDALVAANPNECSNCGELRRPHHVCPACGHYDGREVVALVEEVDLDDEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE7</accession>
    <name>A0A2M9PAE7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Fido domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14040</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000931">
        <property type="protein sequence ID" value="PJN94516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006440">
        <property type="entry name" value="Doc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003812">
        <property type="entry name" value="Fido"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036597">
        <property type="entry name" value="Fido-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02661">
        <property type="entry name" value="Fic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF140931">
        <property type="entry name" value="SSF140931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01550">
        <property type="entry name" value="DOC_P1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51459">
        <property type="entry name" value="FIDO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fido" evidence="1">
        <location>
            <begin position="8"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51459"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13960" checksum="6D724BF0A8D4E4B1" modified="2018-04-25" version="1">MARRHYRLTLADALTAHEEALTYGGRDGIGSLHLIESALGRPYSGYHRPIAHKAAAVLHSMIGNHGFVDANKRTAWLLVEILIDRSGYRLDIPDDEPIDDLVAAVAAGQMGFDDLILWFGDRLEPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI1</accession>
    <name>A0A2M9PAI1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Ferredoxin--NADP(+) reductase</fullName>
            <ecNumber evidence="4">1.18.1.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13875</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H(+) + NADP(+) + 2 reduced [2Fe-2S]-[ferredoxin] = NADPH + 2 oxidized [2Fe-2S]-[ferredoxin]</text>
            <dbReference type="Rhea" id="RHEA:20125"/>
            <dbReference type="Rhea" id="RHEA-COMP:10000"/>
            <dbReference type="Rhea" id="RHEA-COMP:10001"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33737"/>
            <dbReference type="ChEBI" id="CHEBI:33738"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.18.1.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the ferredoxin--NADP reductase type 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.18.1.2" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000915">
        <property type="protein sequence ID" value="PJN94547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004324">
        <property type="term" value="F:ferredoxin-NADP+ reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd06195">
        <property type="entry name" value="FNR1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008333">
        <property type="entry name" value="Cbr1-like_FAD-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017927">
        <property type="entry name" value="FAD-bd_FR_type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033892">
        <property type="entry name" value="FNR_bac"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039261">
        <property type="entry name" value="FNR_nucleotide-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017938">
        <property type="entry name" value="Riboflavin_synthase-like_b-brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00970">
        <property type="entry name" value="FAD_binding_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52343">
        <property type="entry name" value="SSF52343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63380">
        <property type="entry name" value="SSF63380"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51384">
        <property type="entry name" value="FAD_FR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FAD-binding FR-type" evidence="5">
        <location>
            <begin position="10"/>
            <end position="110"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008312"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013223"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="29469" checksum="EAC1F7B1F740FCDF" modified="2018-04-25" version="1">MNQVVDKALRGMALLKVRNIRHWTDRTFSFQCDRPASFRFRSGEFAMIGLIVDGKPLLRAYSIASPSWDEELEFYSIKVEDGPLTSRLQHLKEGDEIVMRAKPVGTLVHDALTPGKRLFFFSTGTGVAPFASLIREPESYERFEQVILTQTCRQTAELDYGHALIAQINGDELLSEIVGDKLSFIATTTREPSPHMGRITDWIRDGRLAEATGAPLNPKTDRVMICGSMAMLQEHKAICEELGFKEGSNSEPGQFVIEKAFVD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAI3</accession>
    <name>A0A2M9PAI3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Elongation factor P</fullName>
            <shortName evidence="7">EF-P</shortName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7 11" type="primary">efp</name>
        <name evidence="11" type="ORF">CNY89_13815</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 7">Protein biosynthesis; polypeptide chain elongation.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 7 8">Belongs to the elongation factor P family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000910">
        <property type="protein sequence ID" value="PJN94555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00345"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd04470">
        <property type="entry name" value="S1_EF-P_repeat_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05794">
        <property type="entry name" value="S1_EF-P_repeat_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00141">
        <property type="entry name" value="EF_P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015365">
        <property type="entry name" value="Elong-fact-P_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014722">
        <property type="entry name" value="Rib_L2_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020599">
        <property type="entry name" value="Transl_elong_fac_P/YeiP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013185">
        <property type="entry name" value="Transl_elong_KOW-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001059">
        <property type="entry name" value="Transl_elong_P/YeiP_cen"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011768">
        <property type="entry name" value="Transl_elongation_fac_P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30053">
        <property type="entry name" value="PTHR30053"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01132">
        <property type="entry name" value="EFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08207">
        <property type="entry name" value="EFP_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09285">
        <property type="entry name" value="Elong-fact-P_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005901">
        <property type="entry name" value="EF-P"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01185">
        <property type="entry name" value="EFP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00841">
        <property type="entry name" value="Elong-fact-P_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00038">
        <property type="entry name" value="efp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7 11" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="6 7" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="EFP" evidence="10">
        <location>
            <begin position="69"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="domain" description="Elong-fact-P_C" evidence="9">
        <location>
            <begin position="131"/>
            <end position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009479"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022768"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU004389"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="SMART" id="SM00841"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM01185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="20946" checksum="1F0AD0E477353E51" modified="2018-04-25" version="1">MAKINGNEIRPGYILDHDGGLWVAVKVAHVKPGKGGAFAQVELKNIRDGRKLNERFRSADKVERVRLDQKDQQFLYENDGMLVFMDAETFEQIEIPADILGDRRPFLQDGTTVQIEYYEDEALNVYLPEKVTCVVAETEPAVKGQTAANSFKPAILDNGLRVMIPPFVGEGEAIVVSTETMEYVERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAJ7</accession>
    <name>A0A2M9PAJ7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13810</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000909">
        <property type="protein sequence ID" value="PJN94558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="28"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="7226" checksum="9A6D84F9FDDDC18D" modified="2018-04-25" version="1" fragment="single">TTLVAIIGLLDPVGLISAIRANASWNGMVWELYGFVAFLFFICCFGMSKYSQHLERRLRTDRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK2</accession>
    <name>A0A2M9PAK2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cytochrome-c oxidase</fullName>
            <ecNumber evidence="3">7.1.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_13675</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Energy metabolism; oxidative phosphorylation.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the heme-copper respiratory oxidase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.9" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000894">
        <property type="protein sequence ID" value="PJN94580.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045278">
        <property type="term" value="C:plasma membrane respiratory chain complex IV"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006119">
        <property type="term" value="P:oxidative phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.210.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036927">
        <property type="entry name" value="Cyt_c_oxase-like_su1_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000883">
        <property type="entry name" value="Cyt_C_Oxase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004677">
        <property type="entry name" value="Cyt_c_oxidase_cbb3_su1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422">
        <property type="entry name" value="PTHR10422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10422:SF29">
        <property type="entry name" value="PTHR10422:SF29"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00115">
        <property type="entry name" value="COX1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81442">
        <property type="entry name" value="SSF81442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="7"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="29"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="69"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004673"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012949"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94580.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="14708" checksum="0A5D63EDBFEAC427" modified="2018-04-25" version="1" fragment="single">MLDGFKITALGVLVLFFAIAANWGQDDAYRLHALILMAISAIAFIWAIRTAGAQKRAPETGYMDEVIRYGVIATALWGVVGFLAGTYIAFQLAFPFLNWELPWTSFGRLRPLHTSAVIFAFGGNALIATSFYVV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK5</accession>
    <name>A0A2M9PAK5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13905</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000918">
        <property type="protein sequence ID" value="PJN94541.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94541.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8158" checksum="8EE2D3CA7C788A03" modified="2018-04-25" version="1">MLGVAMSDRHFRLSEAQFARPEPLLPTKPRGVPGVDDRRVISGIVHVIRGGPMWRDAPAVHGPPKTLHNRFVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAL9</accession>
    <name>A0A2M9PAL9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13785</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000908">
        <property type="protein sequence ID" value="PJN94559.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94559.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10532" checksum="636EC922F5DB8785" modified="2018-04-25" version="1">MEISFWTPARLLFRPLRVWRATMEEVLVRIEDIGSFLSGAGASTPPGWRIRGIADPRPSSDVCGVRAAFRPRRAGLSAAYGQFLVYLIFRNSGY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU1</accession>
    <name>A0A2M9PAU1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13220</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000846">
        <property type="protein sequence ID" value="PJN94654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11388" checksum="B13180F04051C23C" modified="2018-04-25" version="1" fragment="single">QVEKLAEGADIIVHSAVHPDLAPEKGSGMPPLVYHRQSNATDLGAMAARAGARYLMLTHLGPSLGADSQGPYPLPGGPMTEASYRDAAAAGGFTGEIVVGTDLASVRLPPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAU6</accession>
    <name>A0A2M9PAU6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AAA family ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13240</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000848">
        <property type="protein sequence ID" value="PJN94651.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045006">
        <property type="entry name" value="CHLI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004482">
        <property type="entry name" value="Mg_chelat-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039">
        <property type="entry name" value="PTHR32039"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32039:SF7">
        <property type="entry name" value="PTHR32039:SF7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94651.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11178" checksum="467268836F717546" modified="2018-04-25" version="1" fragment="single">MVARAYTVAFQGVEARLVEVQCAISAGLPAFNLVGLPDKAVSEAKERVRAALTSMGLALPAKRITVNLSPADLPKEGSHFDLPIALAVLAAMEVVPADAAAGNVALGEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB05</accession>
    <name>A0A2M9PB05_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12830</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000811">
        <property type="protein sequence ID" value="PJN94720.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014799646" evidence="1">
        <location>
            <begin position="17"/>
            <end position="88"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94720.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9443" checksum="522A2CF4CB033367" modified="2018-04-25" version="1" fragment="single">MIWAALLLTLAAPASAREGGPIRTGEHPGFTRVVMEIDPATEWSLETRDGTAVILFPGRAIEFGTDGVWERIPRTRVTSIAAARGPEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB50</accession>
    <name>A0A2M9PB50_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12570</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000787">
        <property type="protein sequence ID" value="PJN94761.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94761.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11619" checksum="771CC8E951CC7CB6" modified="2018-04-25" version="1" fragment="single">MMDNARCTFSIDRLRAKRNIGIMKLAQLTEKIASDLGERYGNVRLKTRLGREAGKLSSGKRGTAGADVVSPDLTWSWLAQLTIGETSGVVAEVEELGSTQFSLCEW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN7</accession>
    <name>A0A2M9PBN7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Autotransporter outer membrane beta-barrel domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000690">
        <property type="protein sequence ID" value="PJN94929.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="488"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94929.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="488" mass="49741" checksum="C3156BE86C1C6DCF" modified="2018-04-25" version="1" fragment="single">MGWILALASAAEAQAVLPPDPRLDYLPLDFGTASTFLTGIRGTNVVGNSVIPGGQTGGLYYDGASGLWSALPATTENGSNYPGAIGSSPYGPSFGTPGGVLRVVGSYKTDAAPVDLGYLYDGAAAPGTDPLTLVYPDPDTGFTIAHSTFGDTVVGNYDTGPLTGNAFIYDIPSGTYVTNNRRGAVSTTAYGIWGDKIAGGYGALGPDREPGFEHGYIYDMRTGRWATHDHPDAVFTHFEGITGAGRGGAYNLVADWIGDDGKLQAAVLHIDAEGRETWIPIAFPGADVTTANSIHQDRVIGVYTDAAGTHGFEVTIPGIYDPIANRGELSSSADDVTLLEGAPGDDVVNSGSIVTTGDFANAVRVDRHGVVYNSGTIEVSGATAGAVALRGEFPSLINTGVLKAASAGDAVRADANASGSLIVNAGVIDGRIDVRAGDNARFENSGLIGMSEPGAGLSSVISGVFVQTAAGAYAPRVGGEAADSLAVL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBY5</accession>
    <name>A0A2M9PBY5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000626">
        <property type="protein sequence ID" value="PJN95060.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008579">
        <property type="entry name" value="UGlyAH_Cupin_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05899">
        <property type="entry name" value="Cupin_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_3" evidence="1">
        <location>
            <begin position="41"/>
            <end position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05899"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95060.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13012" checksum="A5FE52D2918EB1F6" modified="2018-04-25" version="1">MSLLVTLETRDLGPAPKVSRAMPDRLIAGDPTFRTWPADVSRDGMIHTGVWEATPGETRSIKGESLEFCHILEGVVEITQDGGAPVTYRAGDSFVMKPGFTGVWRTIETVRKIYVTVY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC14</accession>
    <name>A0A2M9PC14_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Coenzyme PQQ synthesis protein B</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Pyrroloquinoline quinone biosynthesis protein B</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pqqB</name>
        <name evidence="8" type="ORF">CNY89_10655</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">May be involved in the transport of PQQ or its precursor to the periplasm.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1 6">Cofactor biosynthesis; pyrroloquinoline quinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the PqqB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000619">
        <property type="protein sequence ID" value="PJN95073.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00539"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018189">
        <property type="term" value="P:pyrroloquinoline quinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00653">
        <property type="entry name" value="PQQ_syn_PqqB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001279">
        <property type="entry name" value="Metallo-B-lactamas"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011842">
        <property type="entry name" value="PQQ_synth_PqqB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12706">
        <property type="entry name" value="Lactamase_B_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02108">
        <property type="entry name" value="PQQ_syn_pqqB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0884">PQQ biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Lactamase_B" evidence="7">
        <location>
            <begin position="49"/>
            <end position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004886"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00015084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00653"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF12706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95073.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="30988" checksum="B97BAE3813896299" modified="2018-04-25" version="1">MRAIVLGAAAGGGLPQWNCGCLNCVLARDGEIPVASQSSLAVSVDGVDWAILNASPDIRGQLATTPALRPRALRDSPVEAVLLTNGDIDHVAGLLGLREKQSLSLHATAEILDVLAGNPVFAALDPAFVTRRAQTLGRPFALLPGLTAELFAVPGKVPLYLEGETVATDLEGEQTVGVRLETDRGVAFYVPGCAAVTPALAERLRGAGLVFFDGTLWEDDEMIRAGLGAKTGRRMGHISMNGPEGSIAALESLGVRRKVFVHMNNSNPVWRAGPERAAAEAAGWEIARDGMEVTL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC48</accession>
    <name>A0A2M9PC48_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">SAM-dependent methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10325</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the CFA/CMAS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000591">
        <property type="protein sequence ID" value="PJN95127.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008610">
        <property type="term" value="P:lipid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003333">
        <property type="entry name" value="Mycolic_cyclopropane_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF003085">
        <property type="entry name" value="CMAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="active site" evidence="2">
        <location>
            <position position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010815"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR003085-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95127.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="381" mass="42990" checksum="CC56648931CE7AAB" modified="2018-04-25" version="1">MIRDLPAGRLDVVLPDGRTFRVEGRAPGPEGRLEVRNPAFFARVAREGELGFAEAYLDGWWDSPDLQTLLDLLLSIDQWVDRDHPAAGLVRMWQRFNHWLNRNTKRQARRNIAAHYDLGNAFYSRWLDETMTYSSALFDDPAEPLSEAQTRKYASVCDRIGLHPGARVLEIGCGWGGFAEYAASVRGAHVTGLTISREQHDFARARIQAAGLGDRVEIVLRDYRDERGSYDGIASIEMFEAVGEKYWPAYFSTVRDRLKPGAQATIQVITVSEGLFPTYRKTVDFIQKYIFPGGMLPSPSALQAEIVRAGLAEAGTLTFGQSYSETLRRWLTAFEAAWAEIQPLGFDDRFRRMWRFYLASCAAAFRSGTTDVAQVTMRRPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB3</accession>
    <name>A0A2M9PCB3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000579">
        <property type="protein sequence ID" value="PJN95158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="1">
        <location>
            <begin position="11"/>
            <end position="40"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8630" checksum="28DA9351B2CAE711" modified="2018-04-25" version="1">MSIPKVSIEQVKAARALLRWSQSSLAEASGVSLPTIKRLEASTGGVGGREETGNAIRAALEAAGVEFIPENGGGPGVRLRTTKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB7</accession>
    <name>A0A2M9PCB7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PS_pyruv_trans domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10180</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000580">
        <property type="protein sequence ID" value="PJN95152.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007345">
        <property type="entry name" value="Polysacch_pyruvyl_Trfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04230">
        <property type="entry name" value="PS_pyruv_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PS_pyruv_trans" evidence="1">
        <location>
            <begin position="55"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04230"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95152.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="395" mass="42661" checksum="CABEADAA8DE4FCDA" modified="2018-04-25" version="1">MTDIAGGILPPASFWECRVIGACQSGAGRTLPPSGNTRGTHMGKVAVHGSYHADNFGDTLLVRLICDMLAEHVGRENVALAMPGQPAEQAAIGYPVLAPEERGSVDLLVYGGGGYFSQHAGSLLRTVRATRRRNRRHLDWLPQFAGSRKAMIGVGVGPISFHRAPVRKLFSACETVLVRDAESMAFCEDYGFRTRDLRQCVDLALSLPVVPGPRAGVAIHLPGMSPEVMETVLSALAAHPLGRSERIEAIFDAPPTEGLEAWTADLQRIAQAKLGRALPVFPYPGVDVLREKLAGYELVVTCKLHVGIVTIAQGGKVISVAQQSKTPRLYRQLGLEAFCVPLAQLSPARLTEAFAKLPEFSVRRDVIEQGIGVIRETVAKLVRQTADRDRLAEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE7</accession>
    <name>A0A2M9PCE7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_09720</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000543">
        <property type="protein sequence ID" value="PJN95227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003317">
        <property type="entry name" value="Cyt-d_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43141">
        <property type="entry name" value="PTHR43141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02322">
        <property type="entry name" value="Cyt_bd_oxida_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="50"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="84"/>
            <end position="103"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="115"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="151"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="193"/>
            <end position="215"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007543"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="24265" checksum="F8C2C0D267701A1F" modified="2018-04-25" version="1">MAISSTPCLRIRLAMATMSQGMALGGFIDGFELTETGSFAGGALDWLSPFSVFTGLSLVVAYALLGATWLVMKTEGDLQAQMRQLARGMTIALVVAIALVSLWTPLAHPDVAARWFALPNLLFFLPVPVLVGLTAWALLNATHGQSHSAPFLLALVLLFLGYSGLGISLWPMIIPPNVSIWDAAAPPQSMGFALVGALFIIPFILMYTAWSYYVFRGKVKSGDGYH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH5</accession>
    <name>A0A2M9PCH5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09700</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000542">
        <property type="protein sequence ID" value="PJN95228.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04623">
        <property type="entry name" value="CBS_pair_bac_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.580.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000644">
        <property type="entry name" value="CBS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046342">
        <property type="entry name" value="CBS_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044725">
        <property type="entry name" value="CBSX3_CBS_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00571">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00116">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54631">
        <property type="entry name" value="SSF54631"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51371">
        <property type="entry name" value="CBS"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0129">CBS domain</keyword>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="11"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="domain" description="CBS" evidence="2">
        <location>
            <begin position="77"/>
            <end position="133"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00703"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51371"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95228.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="15628" checksum="BA7B26B5323F07A9" modified="2018-04-25" version="1">MSVRKIIEAKQIQKIITVKPEDTVKSVAELLAKHKIGAVIVSGDGAIVDGILSERDIVRALGTVGVECLTGRVSDLMTASVIGCRPDDTANSVMEKMTEGRFRHMPVIENNRMIGVISIGDVVKARLAEIEQENSALTGMIANSW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH6</accession>
    <name>A0A2M9PCH6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Heavy metal translocating P-type ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09695</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell membrane</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000541">
        <property type="protein sequence ID" value="PJN95233.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019829">
        <property type="term" value="F:ATPase-coupled cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018303">
        <property type="entry name" value="ATPase_P-typ_P_site"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027256">
        <property type="entry name" value="P-typ_ATPase_IB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044492">
        <property type="entry name" value="P_typ_ATPase_HD_dom"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDF00027">
        <property type="entry name" value="p-type_atpase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01525">
        <property type="entry name" value="ATPase-IB_hvy"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00154">
        <property type="entry name" value="ATPASE_E1_E2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-1278">Translocase</keyword>
    <keyword evidence="2 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="319"/>
            <end position="338"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="344"/>
            <end position="366"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006024"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU362081"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95233.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="373" mass="37986" checksum="ADFBAE3E8838B55C" modified="2018-04-25" version="1" fragment="single">PALVFAIASAVSVLIIACPCALGLATPISITTAAGRGAQAGVLIKDAEALERMAAVDTLIVDKTGTLTMGKPKLTDTVVLADVTEADLLSLAAALERGSEHPLAEAIVEGAEAQRVPRQEAADFDAVTGKGVRGSVGGRAVALGNAAMMREMGLDTGAAEAKADTLRAEGKTAMFVAVEGALAGIVAVADPIKDSTAQAIRELHAQGLRVIMATGDNERTAQAVAGKLGIDEVRAGVLPEAKKDLIDQLRRDGHKIAMAGDGVNDAPALAAADVGIAMGTGADVAMESAGITLLGGDLMGIVRARKLARATLRNIKQNLFFAFAYNALGVPVAAGLLYPLTGMLLSPMIAAAAMSLSSVSVISNALRLRRIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCH8</accession>
    <name>A0A2M9PCH8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">2Fe-2S ferredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_09605</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>2Fe-2S cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49601"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the adrenodoxin/putidaredoxin family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000534">
        <property type="protein sequence ID" value="PJN95247.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140647">
        <property type="term" value="P:P450-containing electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00207">
        <property type="entry name" value="fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036010">
        <property type="entry name" value="2Fe-2S_ferredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001041">
        <property type="entry name" value="2Fe-2S_ferredoxin-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001055">
        <property type="entry name" value="Adrenodoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018298">
        <property type="entry name" value="Adrenodoxin_Fe-S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012675">
        <property type="entry name" value="Beta-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23426">
        <property type="entry name" value="PTHR23426"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00111">
        <property type="entry name" value="Fer2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00355">
        <property type="entry name" value="ADRENODOXIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54292">
        <property type="entry name" value="SSF54292"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51085">
        <property type="entry name" value="2FE2S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00814">
        <property type="entry name" value="ADX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="2Fe-2S ferredoxin-type" evidence="3">
        <location>
            <begin position="2"/>
            <end position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010914"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95247.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="107" mass="11919" checksum="031A87203986C47F" modified="2018-04-25" version="1">MARITYIEHNGKPHEVEVSTGMTVMEGARDNNIPGIEADCGGACACSTCHVYVAEDWVDRLPPKDAMEQDMLDFAWEPDPVRSRLTCQLRVTDDLDGLVVQMPLKQI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI9</accession>
    <name>A0A2M9PCI9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000531">
        <property type="protein sequence ID" value="PJN95251.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95251.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8657" checksum="23AF2598E029FDC2" modified="2018-04-25" version="1">MLDEATSALDNLTERAVMDAVHNLGGQKTIIMIAHRLSTVQDCDRIFLLENGRVAAEGAYDDLVETNDHFRRLASGGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCK0</accession>
    <name>A0A2M9PCK0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09440</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000520">
        <property type="protein sequence ID" value="PJN95277.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95277.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9567" checksum="22B204716C8E67DB" modified="2018-04-25" version="1">MHRLDGIGAVERRIGLGPGERDVGLRRRRSIWPLRVISARSCLSSTLALPLRPKARAMSRLAVWSGCSRSQARIWSAEGMRSISAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCL1</accession>
    <name>A0A2M9PCL1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Metallophos domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09375</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000516">
        <property type="protein sequence ID" value="PJN95286.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="2">
        <location>
            <begin position="19"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="179"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="225"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95286.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="23947" checksum="FE9C26B556613F0F" modified="2018-04-25" version="1" fragment="single">MLAPVFAGLDPAGVADWDVIPDVHGMGDRLEGLLRALGYAERGGAWRPADSARKAIFLGDFIDRGPDQARVLDIARRMIGEGVALAVMGNHELNALHYATPDPETGAPLRAHSPKNMAQHAAFLEAFAPGSAARRDALGWMRRLPLFLDLGGFRVAHAAWLDPAIAAIRAESRFGVLEGDLLGPGRRSRRPLRGGGRRHRQGAGGRSAGGGRLSRQGRASAPPQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCS9</accession>
    <name>A0A2M9PCS9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Ubiquinone biosynthesis O-methyltransferase</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="1">2-polyprenyl-6-hydroxyphenol methylase</fullName>
            <ecNumber evidence="1">2.1.1.222</ecNumber>
        </alternativeName>
        <alternativeName>
            <fullName evidence="1">3-demethylubiquinone 3-O-methyltransferase</fullName>
            <ecNumber evidence="1">2.1.1.64</ecNumber>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="1" type="primary">ubiG</name>
        <name evidence="2" type="ORF">CNY89_09065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 3-(all-trans-polyprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = a 2-methoxy-6-(all-trans-polyprenyl)phenol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:31411"/>
            <dbReference type="Rhea" id="RHEA-COMP:9550"/>
            <dbReference type="Rhea" id="RHEA-COMP:9551"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:62729"/>
            <dbReference type="ChEBI" id="CHEBI:62731"/>
            <dbReference type="EC" id="2.1.1.222"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 3-demethylubiquinol + S-adenosyl-L-methionine = a ubiquinol + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:44380"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10914"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:84422"/>
            <dbReference type="EC" id="2.1.1.64"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; ubiquinone biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the methyltransferase superfamily. UbiG/COQ3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.222" evidence="1"/>
    <dbReference type="EC" id="2.1.1.64" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000494">
        <property type="protein sequence ID" value="PJN95340.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00232"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0102208">
        <property type="term" value="F:2-polyprenyl-6-hydroxyphenol methylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008425">
        <property type="term" value="F:2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008689">
        <property type="term" value="F:3-demethylubiquinone-9 3-O-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006744">
        <property type="term" value="P:ubiquinone biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00472">
        <property type="entry name" value="UbiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010233">
        <property type="entry name" value="UbiG_MeTrfase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01983">
        <property type="entry name" value="UbiG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 2" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="1 2" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0831">Ubiquinone biosynthesis</keyword>
    <feature type="binding site" evidence="1">
        <location>
            <position position="41"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="72"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="93"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="1">
        <location>
            <position position="136"/>
        </location>
        <ligand>
            <name>S-adenosyl-L-methionine</name>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95340.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="27061" checksum="231531F0CDF82070" modified="2018-04-25" version="1">MSATSSGTVDPAEVAKFEAMAAEWWDPQGKFKPLHMLQPCRLSYVVAQIAAEFGRDPEALRPFEGLRLLDIGCGGGLLCEPMARLGAHVVGADAAARNIPVARIHAAQSGLDIDYRHTTAEALAEAGEVFDVVLNMEVIEHVSSPPAYLAACAALMRPGGLMICSTINRNPKSYLMAIIGAERVMRWLPKGTHDWSKFITPDELFALLRGAGLDPVDRKGFVFDPLRWTWSLSDRDLSVNYVTASVKPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT1</accession>
    <name>A0A2M9PCT1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000486">
        <property type="protein sequence ID" value="PJN95357.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95357.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="14295" checksum="14628E0EABCB6BCA" modified="2018-04-25" version="1">MRERLRSRRELVDQRSVPAHPQGHATVRILLPGCGYPMKDRIRRYLDIISEVHAKVEPFMPFFGRRSYITIEEHNVRDVIWIGDNLLDEGTFVRVRRNRFIGHSQSPFTVKGEGILASGVEGLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY5</accession>
    <name>A0A2M9PCY5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Type IV secretion system protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_08695</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000466">
        <property type="protein sequence ID" value="PJN95401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032710">
        <property type="entry name" value="NTF2-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007430">
        <property type="entry name" value="VirB8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04335">
        <property type="entry name" value="VirB8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54427">
        <property type="entry name" value="SSF54427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="25"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="domain" description="VirB8" evidence="6">
        <location>
            <begin position="10"/>
            <end position="216"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="225" mass="25136" checksum="4E603CE576D86649" modified="2018-04-25" version="1">MSQRSDTVHRFEDEVFFGLQRRAALFGWMAGLSLVVALCAVGAMVLMLPLKEIRPYVVMVDRQTGESELVVSTRPADLAETDAVRQAELVRYVTERETYDVADNRERIPQVLAASENQAAASLRALWTREAEQYPPAIYGEDSLIRVKVRSVAMLNDATAQVRFTRTLEQPGLQPVVRAFVATVGFAFQPRVERTLEAVWRNPLGFSVTSYRIDAETLDAADGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD72</accession>
    <name>A0A2M9PD72_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08145</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000427">
        <property type="protein sequence ID" value="PJN95495.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95495.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9177" checksum="F7A12C537DDB26B3" modified="2018-04-25" version="1">MTFAPIAQRGLILLGCGKMGSALLDGWLRGGLPASAATVIEPNPSDRLKALADEGLRLNLELPPDPAIAVLAPLPRRQDRGIRGEPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD1</accession>
    <name>A0A2M9PDD1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_07780</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Single-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Single-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the GSP M family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000400">
        <property type="protein sequence ID" value="PJN95555.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015627">
        <property type="term" value="C:type II protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015628">
        <property type="term" value="P:protein secretion by the type II secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007690">
        <property type="entry name" value="T2SS_GspM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023229">
        <property type="entry name" value="T2SS_M_periplasmic_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04612">
        <property type="entry name" value="T2SSM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103054">
        <property type="entry name" value="SSF103054"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-0653">Protein transport</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004167"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95555.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="17200" checksum="27290FF149F4D446" modified="2018-04-25" version="1">MIAGISRMRTLHSPWWNQRSPRERVLLAVLLALTVGYLGYAFVARPLLGARTEALASIARSDMALARLAASPGTALPAASPDQLVPSIVTETATQFGMTIRRIEPEDDGARLTIDDADFADVLSWLQTLEDGYGLRVVAVKMDRGSAPGMVHASLTVRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG0</accession>
    <name>A0A2M9PDG0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Electron transport protein SCO1/SenC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07595</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000386">
        <property type="protein sequence ID" value="PJN95587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7634" checksum="2E6BC542E9608190" modified="2018-04-25" version="1" fragment="single">PLARRGATRAAAASFRIHYAREDDPAAQDGYAMSHSPSLYLIGPDGDWLRQFEYGTPASKILADLEERL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDQ2</accession>
    <name>A0A2M9PDQ2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">RNA pyrophosphohydrolase</fullName>
            <ecNumber evidence="3">3.6.1.-</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">(Di)nucleoside polyphosphate hydrolase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">rppH</name>
        <name evidence="3" type="synonym">nudH</name>
        <name evidence="6" type="ORF">CNY89_07030</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the Nudix hydrolase family. RppH subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.-" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000347">
        <property type="protein sequence ID" value="PJN95681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016462">
        <property type="term" value="F:pyrophosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd03671">
        <property type="entry name" value="Ap4A_hydrolase_plant_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00298">
        <property type="entry name" value="Nudix_RppH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020476">
        <property type="entry name" value="Nudix_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022927">
        <property type="entry name" value="RppH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00502">
        <property type="entry name" value="NUDIXFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51462">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="5">
        <location>
            <begin position="10"/>
            <end position="154"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="Nudix box" evidence="3">
        <location>
            <begin position="44"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS51462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="18245" checksum="A579D3225733E28E" modified="2018-04-25" version="1">MTEAEILALPYRPCVGVMLVNRQGRIFVGQRIDAAEAAWQMPQGGIDKGEAPLAAALRELEEETGVPAASVTVVAEAPDWISYDLPIELAPKVWKGRYRGQTQRWFLMRLEGPDSLIDIETKHPEFREWRWSPPEDLVEMIVPFKRAVYRAVLEAFAGRLGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDV9</accession>
    <name>A0A2M9PDV9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000328">
        <property type="protein sequence ID" value="PJN95729.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009799">
        <property type="entry name" value="EthD_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02118">
        <property type="entry name" value="TIGR02118"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95729.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8739" checksum="49D0779268AAB43E" modified="2018-04-25" version="1">MIKLTALYGHPTDPDAFETYYAKTHMPLVAKMPGPGAPPGGVGERPRRGLVRRQAWLALLHAPHYRKKRVGRRPDQPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ5</accession>
    <name>A0A2M9PDZ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06740</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000326">
        <property type="protein sequence ID" value="PJN95734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="25"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="14629" checksum="EE1F3DE3BBCD7BF6" modified="2018-04-25" version="1" fragment="single">IDRPAEEAALDRAIVEFDIRTGDRAARAGDLSGGNQQKLLLAKILQAEPRVIIIDEPSRGVDIGAKQQIYGFIALLAAEGRSVIVVSSELPEVIGVSNRVIVMARGRIAGELEGDAITEDAILRRAMGLETRKAVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE32</accession>
    <name>A0A2M9PE32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06575</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000313">
        <property type="protein sequence ID" value="PJN95768.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032809">
        <property type="entry name" value="Put_HupE_UreJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13795">
        <property type="entry name" value="HupE_UreJ_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="126"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="156"/>
            <end position="173"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="217"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="254"/>
            <end position="274"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95768.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="279" mass="29927" checksum="A261A8C4CC7184CA" modified="2018-04-25" version="1">MVQDIRPVFGPGFTLTPQPGGSVVGGFVIFRYALTGDTPLAGTTLRIDNLDRTTMDALANVALLDGTHWSFLLRPGEKAVEIPAAPSPWRVVQTYTRLGVEHILEGVDHLAFIAALMLVVRGWPMLLKTVTAFTVAHSITLALATFGYVALPPPPVEALIALSILLVAAEAVHLRRGRASLAARWPWIVAFAFGLLHGFGFAGALREIGLPQGDVPLALLFFNVGVELGQLLFLAAILAVGASLRRIFVFPSQAPFAAAYTIGTIAAFWCFARLEAMFL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE96</accession>
    <name>A0A2M9PE96_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DUF2147 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000276">
        <property type="protein sequence ID" value="PJN95877.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019223">
        <property type="entry name" value="DUF2147"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09917">
        <property type="entry name" value="DUF2147"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2147" evidence="2">
        <location>
            <begin position="9"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95877.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11671" checksum="95B21911CDA548EA" modified="2018-04-25" version="1" fragment="single">LAAAPSPQGVWRTQPGPKGGSMNVEVAPCGGQGETLCGVVVGTFNMNRPDLMGITLIRDMVPDGEGGWSGEIYAPDKGTFDSRMQIEGADLKVEGCMLTVCRSQIWSRVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEA5</accession>
    <name>A0A2M9PEA5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">AEC family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05965</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000277">
        <property type="protein sequence ID" value="PJN95871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7630" checksum="98902102BE59B027" modified="2018-04-25" version="1" fragment="single">MILALVTVILPVFLVIAFGAGAVRGRVISAGAIDGVMLYAQGFALPCVLFRGIVNLDLGAVFDWRLLGSFYT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB0</accession>
    <name>A0A2M9PEB0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000284">
        <property type="protein sequence ID" value="PJN95848.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95848.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9231" checksum="EF862A2CDC84E248" modified="2018-04-25" version="1">MSKELGEMELRARLAERQAALALDALQVVHSKLGALEALAIELARRADLKSSDADGLIERMGASASPAPARNLRQELMRLLHQEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF5</accession>
    <name>A0A2M9PEF5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Lipoyl(octanoyl) transferase</fullName>
            <ecNumber evidence="3">2.3.1.181</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05920</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-lysyl-[protein] + octanoyl-[ACP] = H(+) + holo-[ACP] + N(6)-octanoyl-L-lysyl-[protein]</text>
            <dbReference type="Rhea" id="RHEA:17665"/>
            <dbReference type="Rhea" id="RHEA-COMP:9636"/>
            <dbReference type="Rhea" id="RHEA-COMP:9685"/>
            <dbReference type="Rhea" id="RHEA-COMP:9752"/>
            <dbReference type="Rhea" id="RHEA-COMP:9928"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29969"/>
            <dbReference type="ChEBI" id="CHEBI:64479"/>
            <dbReference type="ChEBI" id="CHEBI:78463"/>
            <dbReference type="ChEBI" id="CHEBI:78809"/>
            <dbReference type="EC" id="2.3.1.181"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Protein modification; protein lipoylation via endogenous pathway; protein N(6)-(lipoyl)lysine from octanoyl-[acyl-carrier-protein]: step 1/2.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.181" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000276">
        <property type="protein sequence ID" value="PJN95874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00538">
        <property type="reaction ID" value="UER00592"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033819">
        <property type="term" value="F:lipoyl(octanoyl) transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009249">
        <property type="term" value="P:protein lipoylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004143">
        <property type="entry name" value="BPL_LPL_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000544">
        <property type="entry name" value="Octanoyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020605">
        <property type="entry name" value="Octanoyltransferase_CS"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF016262">
        <property type="entry name" value="LPLase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51733">
        <property type="entry name" value="BPL_LPL_CATALYTIC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01313">
        <property type="entry name" value="LIPB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="8" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="BPL/LPL catalytic" evidence="7">
        <location>
            <begin position="41"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004821"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012334"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00024732"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS51733"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14480" checksum="BF9023C3564487CA" modified="2018-04-25" version="1" fragment="single">MTEVPQTAPLPPPEWRISPGLTGYPQALAEMEARVEAMIAGEAEELVWLLEHPPLYTSGTSAKPADLLLPDRFPVYPARRGGEYTYHGPGQRVAYAMLDLDRRGRDVRAHVWRLEDWAIRALAEFNVTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEH8</accession>
    <name>A0A2M9PEH8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DNA-packaging protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000245">
        <property type="protein sequence ID" value="PJN95957.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08054">
        <property type="entry name" value="gp6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021146">
        <property type="entry name" value="Phafe_gp6_head-tail"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006450">
        <property type="entry name" value="Phage_HK022_Gp6"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05135">
        <property type="entry name" value="Phage_connect_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01560">
        <property type="entry name" value="put_DNA_pack"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95957.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11756" checksum="873783AADAF364DB" modified="2018-04-25" version="1">MPIVTLEQMKEQLAFTADLGDVDDDLIERKIAAAQDHVERWLGHKIEATYGGTGQDPIPPSLVEAVCQLAAWWYENRETASEISFREAPFGVAEIVNSYRDWSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEI3</accession>
    <name>A0A2M9PEI3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_05540</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the TspO/BZRP family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000252">
        <property type="protein sequence ID" value="PJN95933.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd15904">
        <property type="entry name" value="TSPO_MBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1260.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038330">
        <property type="entry name" value="TspO/MBR-related_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004307">
        <property type="entry name" value="TspO_MBR"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10057">
        <property type="entry name" value="PTHR10057"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03073">
        <property type="entry name" value="TspO_MBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005859">
        <property type="entry name" value="PBR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="44"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="74"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="98"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="126"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007524"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95933.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="150" mass="16381" checksum="D3632396EBF0695B" modified="2018-04-25" version="1">MNRTLSLILFVGLVLGVGLAIGGLTVTGGWYDSLAKPGFSPPPWVFGPVWTVIYVLIGVAGWRSWERDRGGRAMKLWGTQMALNYLWTPVYFGAHQIGAALVVILALLAAILAFIAATWRSDRISAWLFLPYAAWVTFATALNASIWALN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ8</accession>
    <name>A0A2M9PEQ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05030</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000223">
        <property type="protein sequence ID" value="PJN96023.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="67"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96023.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="99" mass="10888" checksum="45D6952B4367F9F4" modified="2018-04-25" version="1" fragment="single">FFTIFRRIMLPSSGPIAVVCIIWQFTNIWNDFLFGVSFSDFDSQPMTVALNNLVQSSTGVKEYNVHFAGAIMAAAPTLLVYVVAGRYFVRGLMAGSVKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PER3</accession>
    <name>A0A2M9PER3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Aspartate/glutamate leucyltransferase</fullName>
            <ecNumber evidence="4">2.3.2.29</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">bpt</name>
        <name evidence="7" type="ORF">CNY89_04870</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-aspartyl-[protein] = H(+) + N-terminal L-leucyl-L-aspartyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:50420"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12669"/>
            <dbReference type="Rhea" id="RHEA-COMP:12674"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64720"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133042"/>
            <dbReference type="EC" id="2.3.2.29"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-glutamyl-[protein] = H(+) + N-terminal L-leucyl-L-glutamyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:50412"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12664"/>
            <dbReference type="Rhea" id="RHEA-COMP:12668"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64721"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133041"/>
            <dbReference type="EC" id="2.3.2.29"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the R-transferase family. Bpt subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.29" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000213">
        <property type="protein sequence ID" value="PJN96047.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004057">
        <property type="term" value="F:arginyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008914">
        <property type="term" value="F:leucyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071596">
        <property type="term" value="P:ubiquitin-dependent protein catabolic process via the N-end rule pathway"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00689">
        <property type="entry name" value="Bpt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017138">
        <property type="entry name" value="Asp_Glu_LeuTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR030700">
        <property type="entry name" value="N-end_Aminoacyl_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007472">
        <property type="entry name" value="N-end_Aminoacyl_Trfase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007471">
        <property type="entry name" value="N-end_Aminoacyl_Trfase_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21367">
        <property type="entry name" value="PTHR21367"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04377">
        <property type="entry name" value="ATE_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04376">
        <property type="entry name" value="ATE_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037208">
        <property type="entry name" value="ATE_pro_prd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 7" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ATE_N" evidence="5">
        <location>
            <begin position="17"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="domain" description="ATE_C" evidence="6">
        <location>
            <begin position="108"/>
            <end position="234"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00689"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF04376"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF04377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96047.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="273" mass="30428" checksum="5C363CCD1C9DF054" modified="2018-04-25" version="1">MRHSLPQSHQFYVTAPQPCPYLAGKVERKLFTALQGDGSAHLNDVLSHQGFRRSQNVLYRPSCAGCSACLSARIVVEGFKPSRNQRRVLARNAHLERSSSRPWATDAQFSLFRRYLDARHATGGMADMDSNEFAAMIEETPVRSRVVEYHARAENGRGRELAAVCLTDVLSDGVSMVYSFFDPDLAADSLGAFIILDHIEIAREAGLPYVYLGYWVPGSPKMDYKARYRPLEVFHEGRWAELGEADLTRLGRAPAERGAIGEQVSAIELPLTK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET7</accession>
    <name>A0A2M9PET7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04775</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000208">
        <property type="protein sequence ID" value="PJN96065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="12455" checksum="965F9D82786A58AF" modified="2018-04-25" version="1">MIISLTIEGLDAPQAREIMDAGDLPAGVELGGLSLTGELGAERSSLIVSGVLSLALGVPSGVAANWVWQRIAPAEPNAVVTVVIEGDRCILRSAPELFLALEAAVQRKTAGDEAGTAGVAPSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET8</accession>
    <name>A0A2M9PET8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000212">
        <property type="protein sequence ID" value="PJN96051.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005143">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036693">
        <property type="entry name" value="TF_LuxR_autoind-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03472">
        <property type="entry name" value="Autoind_bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF75516">
        <property type="entry name" value="SSF75516"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Autoind_bind" evidence="1">
        <location>
            <begin position="35"/>
            <end position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03472"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96051.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="18155" checksum="3CE002CAF9ACA4B5" modified="2018-04-25" version="1">MGQIRRAEIGALLRDLDHRSPAGCAIGLHIRFTTPRYMFQSYPKRWMDHYSAAGLLVNDPTVRWGMSNVGWVRWTDLEKIDDHGVLDLAKGYGIMNGVTIALVLESSRSIASFARSDRDFEAAEIAEIEPILVDLHRATASLDPLAAEDRLALKELSIRLTH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF16</accession>
    <name>A0A2M9PF16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000188">
        <property type="protein sequence ID" value="PJN96129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009872">
        <property type="entry name" value="DUF1427"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020017">
        <property type="entry name" value="XapX_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07235">
        <property type="entry name" value="DUF1427"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03510">
        <property type="entry name" value="XapX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="29"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9373" checksum="EC209F923781BFFB" modified="2018-04-25" version="1">MKIYLTSLGVGLLVGVIYALMHVRSPAPPVVALIGLLGILIGEQLPPLVRTLWAREPAALSWLHQVKPHVFGHLPQGKGRPPADDQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFC2</accession>
    <name>A0A2M9PFC2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03820</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the autoinducer-2 exporter (AI-2E) (TC 2.A.86) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000161">
        <property type="protein sequence ID" value="PJN96229.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002549">
        <property type="entry name" value="AI-2E-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21716">
        <property type="entry name" value="PTHR21716"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01594">
        <property type="entry name" value="AI-2E_transport"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="62"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="82"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="114"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009773"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96229.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="168" mass="17579" checksum="A5B55905FE3B971E" modified="2018-04-25" version="1">MQALTAPTGPTASSPEDRVRAATAAHSTPRRPIMTPTIRTALAAAGLLALAVLALAALQVGVMPITVPVVIWAWFARDPGQAILLTAWLTVGTFIDLVLKPIMLGSSLGTPRLVIFAGVMMGAISYGPIGLFIGPVLLAVVWDVLRTGLDGPEVRPKGVTREPAGWNR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ1</accession>
    <name>A0A2M9PFJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Aromatic acid/H+ symport family MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03275</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000132">
        <property type="protein sequence ID" value="PJN96317.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005828">
        <property type="entry name" value="MFS_sugar_transport-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005829">
        <property type="entry name" value="Sugar_transporter_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00083">
        <property type="entry name" value="Sugar_tr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00216">
        <property type="entry name" value="SUGAR_TRANSPORT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00217">
        <property type="entry name" value="SUGAR_TRANSPORT_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="20"/>
            <end position="41"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="61"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="89"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="114"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="146"/>
            <end position="169"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="255"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="288"/>
            <end position="307"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="319"/>
            <end position="336"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="342"/>
            <end position="363"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="384"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="410"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="22"/>
            <end position="435"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96317.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="443" mass="46991" checksum="A6F7D0636525D408" modified="2018-04-25" version="1">MRTIDVSEAIDQGPFGSFQWMVVALCGALLVVDGYDVFVAGTVLPTLIEEWGLTKPQAGTLQAWALFGMMFGALILGPLADKIGRKKGVAISFVLFTSATVMTGFASSPEQFKIFRFVAGLGCGGLMPNAVALMNEYAPRRLRGTMVALMFSGYSIGGMVAAGLGIGLIPSFGWQPMFLMAAVPLLLLPLILWKLPESLGFLIRQGKQDKARRIFAKIDPATPLAADDQLVFNETKSASASIAELFRHGRTLRTLMLWLSFFCCLLLVYLLSSWLPKVLQEAGYAERASLLSLFSLNFGGMAGAIMGGRLGDRFGLPKIVVSYFAAAAISIALIGFNPAPALLFLLVFVAGATTIGTQILLYASVAQLYDMSVRSTGLGWASGVGRIGAIVGPTLGGVLLAQGLPLGQNFLIFAVPAIVSTMAMVIFALVNGRGRKTVQLAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK1</accession>
    <name>A0A2M9PFK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_03205</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000129">
        <property type="protein sequence ID" value="PJN96325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016881">
        <property type="term" value="F:acid-amino acid ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036565">
        <property type="entry name" value="Mur-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004101">
        <property type="entry name" value="Mur_ligase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036615">
        <property type="entry name" value="Mur_ligase_C_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013221">
        <property type="entry name" value="Mur_ligase_cen"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02875">
        <property type="entry name" value="Mur_ligase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08245">
        <property type="entry name" value="Mur_ligase_M"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53244">
        <property type="entry name" value="SSF53244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53623">
        <property type="entry name" value="SSF53623"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1" id="KW-0132">Cell division</keyword>
    <keyword evidence="2" id="KW-0133">Cell shape</keyword>
    <keyword evidence="5" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="3" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Mur_ligase_M" evidence="7">
        <location>
            <begin position="80"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="domain" description="Mur_ligase_C" evidence="6">
        <location>
            <begin position="318"/>
            <end position="398"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02875"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF08245"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="502" mass="54199" checksum="214C7895685D7FD3" modified="2018-04-25" version="1">MAERAITAVGLDLGGVDFLTTDITQSYRDTGGAICEINAGPGIRMHIAPSEGTGRDVGGAVVDMLFPEGAPARIPIAALTGTNGKTTTARMLAHVLKMAGHVVGQTSTDAIYIDGNVTIKGDMTGPASARMVLRDPLIDAAVLETARGGIVRSGLGYDYCNVGAVLNVTSDHLGLGGVDTLDELAEVKRLVIEVARDMAVLNADNEYTLKMGAHVSAPRICWVTRNPDHSLVREHIRLGQPALVLEQGLNGDQIVIYDHKNQIPLIWTHLIPATLEGKALHNVENAMFTAAMAYGMGLTLDQIRTGLRTFDNSFFQSPGRMNVYDEHGFRVILDYGHNEAAVGAMVGVVERLQPIGKRIVCVTCPGDRRDEDVQAIARTVAGHFDVYICHSDDNPRGRAIEEIPEMLKAELIACGVSEDAIQIGPGEEQSMQKALDMARQGDLILVFCDQITRTWKQIIYFKPSFAPAPVPPEARIAAAGFHVPEGWRLVSDERGVRITPET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS7</accession>
    <name>A0A2M9PFS7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">MFS domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_02965</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000116">
        <property type="protein sequence ID" value="PJN96369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="15"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="50"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="77"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="108"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="132"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="1"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="16669" checksum="BDBDEB2BA84C0092" modified="2018-04-25" version="1">MMEWSALLLREHVGASPFATAAVFSIFALAMAGMRLAGDRLAELFGARRVILVSGVVMGVSILGFGLSPSLWLSAPFALLVGVGCANIYPLTMSMVAPLPGQAPEKNVATLALTSFTAFLIGPPFIGIVASAAGLPVALALLAPLGAVPLLMPRSRERAPAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV8</accession>
    <name>A0A2M9PFV8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Amidohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000101">
        <property type="protein sequence ID" value="PJN96431.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017439">
        <property type="entry name" value="Amidohydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036264">
        <property type="entry name" value="Bact_exopeptidase_dim_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11014">
        <property type="entry name" value="PTHR11014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005962">
        <property type="entry name" value="Pept_M20D_amidohydro"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55031">
        <property type="entry name" value="SSF55031"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01891">
        <property type="entry name" value="amidohydrolases"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1 3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="188"/>
            <end position="285"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96431.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="389" mass="41191" checksum="BFC6A632921E6CAE" modified="2018-04-25" version="1">MPVLNRAAELAPIVAEWRRDLHRHPELDFDTHRTAAIVAERLKEFGCDEVVTGIGRTGVVGVIRGRSSGSGRVIGLRADMDALPIEETTGLEWASATPGKMHACGHDGHTAMLLGAARHLAETRAFDGTAVVIFQPAEEGGGGGREMVADGMMDRFGVQEVYGLHNMPGLAVGAFQTRPGPMLAASDTITIQVLGRGGHAAQPHQTIDPTVAASAIVLAIQSVVARNVDPVASAVISITSFQTDGDAFNVIPDRVELRGTARTLDPMVQDLVEARLAELVPAIARGYGAEARLTYHRNYPVTINDPERAAFAAKVAAEVVGPGAVDGAAPPILGAEDFSFMLKARPGAFLFMGNGDTAKLHNPAYDFNDEAIPVGVSYWVRLVERAMPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFZ2</accession>
    <name>A0A2M9PFZ2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Succinate dehydrogenase hydrophobic membrane anchor subunit</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="16" type="primary">sdhD</name>
        <name evidence="16" type="ORF">CNY89_02365</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Membrane-anchoring subunit of succinate dehydrogenase (SDH).</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme</name>
            <dbReference type="ChEBI" id="CHEBI:30413"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Carbohydrate metabolism; tricarboxylic acid cycle.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur protein, plus two membrane-anchoring proteins, SdhC and SdhD.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000089">
        <property type="protein sequence ID" value="PJN96471.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00223"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000104">
        <property type="term" value="F:succinate dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1300.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034804">
        <property type="entry name" value="SQR/QFR_C/D"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014312">
        <property type="entry name" value="Succ_DH_anchor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000701">
        <property type="entry name" value="SuccDH_FuR_B_TM-su"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01127">
        <property type="entry name" value="Sdh_cyt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81343">
        <property type="entry name" value="SSF81343"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02968">
        <property type="entry name" value="succ_dehyd_anc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="11" id="KW-0249">Electron transport</keyword>
    <keyword evidence="8" id="KW-0349">Heme</keyword>
    <keyword evidence="13" id="KW-0408">Iron</keyword>
    <keyword evidence="14 15" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9 15" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 15" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="31"/>
            <end position="52"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="59"/>
            <end position="79"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="15">
        <location>
            <begin position="99"/>
            <end position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004050"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011558"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00019425"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN96471.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13608" checksum="E6FD7A64B1FD8EB2" modified="2018-04-25" version="1">MSYRTDKQRVQGLGSAKEGTGHWWSQRLTSIALIPLTLLFIFPFAASLGGSFEAVRATYASPFNAIVAILFIGVSFHHLQQGLQVVIEDYIHDHAVKTGALLASTLLTWAFGLAGVFAVAKIAFTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG51</accession>
    <name>A0A2M9PG51_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Calx-beta domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01995</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000073">
        <property type="protein sequence ID" value="PJN96527.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007154">
        <property type="term" value="P:cell communication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2030">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038081">
        <property type="entry name" value="CalX-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003644">
        <property type="entry name" value="Calx_beta"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03160">
        <property type="entry name" value="Calx-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141072">
        <property type="entry name" value="SSF141072"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Calx-beta" evidence="4">
        <location>
            <begin position="18"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="138"/>
            <end position="195"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="3">
        <location>
            <begin position="166"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF03160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96527.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="20662" checksum="CF5428D30C93E266" modified="2018-04-25" version="1">MEEDLPILWIEGARALEGEYMVFTVRLSEPAVDAVTVNFRTLGGTALEESDVVSWGGDRLTGTLVFAPGEDVKTISVLVSNDIEDEIDENVLLEIHDPVGATFGGGAQTLTAVGWALDGDGIGADRAIAVSAPVVQEAPAARRSSPSACRKPSPRRKASPSRPSTARPGRGRTTSRGRVRSLSPRASSRRPSRSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG72</accession>
    <name>A0A2M9PG72_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Adenosylhomocysteinase</fullName>
            <ecNumber evidence="4">3.3.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">S-adenosyl-L-homocysteine hydrolase</fullName>
            <shortName evidence="4">AdoHcyase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">ahcY</name>
        <name evidence="9" type="ORF">CNY89_02055</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4 6">
            <text>H2O + S-adenosyl-L-homocysteine = adenosine + L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:21708"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:58199"/>
            <dbReference type="EC" id="3.3.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4 6">
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </cofactor>
        <text evidence="4 6">Binds 1 NAD(+) per subunit.</text>
    </comment>
    <comment type="pathway">
        <text evidence="4 6">Amino-acid biosynthesis; L-homocysteine biosynthesis; L-homocysteine from S-adenosyl-L-homocysteine: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 4 7">Belongs to the adenosylhomocysteinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.3.1.1" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000075">
        <property type="protein sequence ID" value="PJN96519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00314">
        <property type="reaction ID" value="UER00076"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004013">
        <property type="term" value="F:adenosylhomocysteinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006730">
        <property type="term" value="P:one-carbon metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00401">
        <property type="entry name" value="SAHH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00563">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042172">
        <property type="entry name" value="Adenosylhomocyst_ase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000043">
        <property type="entry name" value="Adenosylhomocysteinase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015878">
        <property type="entry name" value="Ado_hCys_hydrolase_NAD-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020082">
        <property type="entry name" value="S-Ado-L-homoCys_hydrolase_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23420">
        <property type="entry name" value="PTHR23420"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05221">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00670">
        <property type="entry name" value="AdoHcyase_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001109">
        <property type="entry name" value="Ad_hcy_hydrolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00996">
        <property type="entry name" value="AdoHcyase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00997">
        <property type="entry name" value="AdoHcyase_NAD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00936">
        <property type="entry name" value="ahcY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00738">
        <property type="entry name" value="ADOHCYASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00739">
        <property type="entry name" value="ADOHCYASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3 4 6" id="KW-0520">NAD</keyword>
    <keyword evidence="2 4 6" id="KW-0554">One-carbon metabolism</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AdoHcyase_NAD" evidence="8">
        <location>
            <begin position="247"/>
            <end position="406"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="78"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="151"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="212"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="213"/>
            <end position="215"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="242"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="246"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="247"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="276"/>
            <end position="281"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="299"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="334"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <begin position="355"/>
            <end position="357"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="400"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007122"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00563"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR001109-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000548"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU004166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="SMART" id="SM00997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="486" mass="53103" checksum="35824B4025E1D0E5" modified="2018-04-25" version="1">MISRSATFRSQVREFAVDHTLTLAEADFVVKDAALAEFGRKEIEIAETEMPGLMALRAEFGAAQPLKGARIAGSLHMTIQTAVLIETLTALGAQVRWASCNIYSTQDHAAAAIAATGVPVFAVKGETLEDYWTYTDRIFGFEGGANLILDDGGDATMYILTGARVEEGETSLIENPDSEEAEYFFAQIKKRLAQSPGWFVKQRHAIKGVSEETTTGVHRLYQLMEKGRLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRRGTDTMMAGKAAVVLGYGDVGKGSAASLRGAGARVMVTEVDPICALQAAMDGFEVVTMDDAAPRADIFITCTGNKDVITLEHMRAMKDMAIVGNIGHFDNEIQVAALKNLKWTNVKDQVDLIAFPDGKRIILLSQGRLLNLGNATGHPSFVMSASFTNQTLAQIELWTRGDTYENKVYVLPKHLDEKVARLHLAKIGVKLTELRADQASYIGVPVEGPFKPEHYRY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGB3</accession>
    <name>A0A2M9PGB3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Threonine dehydratase</fullName>
            <ecNumber evidence="4">4.3.1.19</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01760</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.3.1.19" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000064">
        <property type="protein sequence ID" value="PJN96566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004794">
        <property type="term" value="F:L-threonine ammonia-lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006520">
        <property type="term" value="P:cellular amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1100">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001926">
        <property type="entry name" value="PLP-dep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000634">
        <property type="entry name" value="Ser/Thr_deHydtase_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036052">
        <property type="entry name" value="Trypto_synt_PLP_dependent"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00291">
        <property type="entry name" value="PALP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53686">
        <property type="entry name" value="SSF53686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00165">
        <property type="entry name" value="DEHYDRATASE_SER_THR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0456">Lyase</keyword>
    <keyword evidence="2" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PALP" evidence="3">
        <location>
            <begin position="24"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001933"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8370" checksum="82E68F726DF1E4C8" modified="2018-04-25" version="1" fragment="single">MSSDLAQFVTGVRRAEAALREIFEPTPLQRNDYLSAKHGGEVWLKREDLSPVRSYKIRGAANAMRKALAADPGQR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC6</accession>
    <name>A0A2M9PGC6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Transcriptional repressor NrdR</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">nrdR</name>
        <name evidence="11" type="ORF">CNY89_01545</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8">Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR-boxes.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
        <text evidence="8">Binds 1 zinc ion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the NrdR family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000056">
        <property type="protein sequence ID" value="PJN96605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045892">
        <property type="term" value="P:negative regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00440">
        <property type="entry name" value="NrdR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005144">
        <property type="entry name" value="ATP-cone_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003796">
        <property type="entry name" value="RNR_NrdR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30455">
        <property type="entry name" value="PTHR30455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03477">
        <property type="entry name" value="ATP-cone"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00244">
        <property type="entry name" value="TIGR00244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51161">
        <property type="entry name" value="ATP_CONE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="6 8" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 8 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 8" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 8" id="KW-0804">Transcription</keyword>
    <keyword evidence="5 8" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <keyword evidence="3 8" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ATP-cone" evidence="10">
        <location>
            <begin position="49"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="zinc finger region" evidence="8">
        <location>
            <begin position="3"/>
            <end position="34"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00492"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS51161"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="155" mass="17766" checksum="A63DFCE1FBCCB965" modified="2018-04-25" version="1">MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLVVVKKSGKREAFDRDKLERSIRIALQKRPIDPERVDQMVSGIVRRLESLGETDVPSDVIGQIVMETLARIDTVAYVRFASVYKNFQAADDFEDFVSELRPATPAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH1</accession>
    <name>A0A2M9PGH1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Metal-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01315</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000045">
        <property type="protein sequence ID" value="PJN96645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007332">
        <property type="entry name" value="DUF411"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006311">
        <property type="entry name" value="TAT_signal"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04214">
        <property type="entry name" value="DUF411"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51318">
        <property type="entry name" value="TAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014773804" evidence="1">
        <location>
            <begin position="29"/>
            <end position="159"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="159" mass="16879" checksum="0B1DCD9D95ABD203" modified="2018-04-25" version="1">MTQDTFSRRTLLIGGAALVAASPLRALAQGAGPAIHVMKDPNCGCCSAWIEILENDGFSVTTEASAGTLLMRYKLDNGIPQEMASCHTGRIEGYMIEGHVPAADIWRLLEERPDAVGLAVPGMPYGSPGMGPESEREAFDVFLIRGDGSTEVFTSYASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI3</accession>
    <name>A0A2M9PGI3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HK97 family phage prohead protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000043">
        <property type="protein sequence ID" value="PJN96655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006433">
        <property type="entry name" value="Prohead_protease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04586">
        <property type="entry name" value="Peptidase_S78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01543">
        <property type="entry name" value="proheadase_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1188">Viral release from host cell</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="230" mass="25036" checksum="0D4BF2248A5C443D" modified="2018-04-25" version="1">MKTKDFHLEVKALTDEGTFEGYGSVFNNVDSYGERVAPGAFAKSLVKHAKDGTSPLMLWQHDPWSPIGVWEDLSENNRGLKGKGRLVLDTVKGRETYALLKAGAIRGLSIGYRVIDSEPEEGKGTWLLKELDLMEISVVSFPANGKATVTATKAQAALEDFARRLRDGEPPDVKEFEGLLRDAGIPKAMAVRIASVGYAKAIRSESEGEASKASLLRDLVSAAEAFRPRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI5</accession>
    <name>A0A2M9PGI5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA repair protein RecN</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Recombination protein N</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01205</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RecN family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000041">
        <property type="protein sequence ID" value="PJN96663.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140664">
        <property type="term" value="F:ATP-dependent DNA damage sensor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004604">
        <property type="entry name" value="DNA_recomb/repair_RecN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038729">
        <property type="entry name" value="Rad50/SbcC_AAA"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11059">
        <property type="entry name" value="PTHR11059"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13476">
        <property type="entry name" value="AAA_23"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA_23" evidence="4">
        <location>
            <begin position="13"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00033408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF13476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96663.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10117" checksum="754B5A84ACB8F5E6" modified="2018-04-25" version="1">MLQALGIRDIVLIEAAELRFRPGLNVLTGETGAGKSILLDALGFALGWRGRPILNCGSEIISFHWVIQPTVRASAKIGVNSETGKPMASRMMPE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ1</accession>
    <name>A0A2M9PGJ1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Glutamate--tRNA ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">gltX</name>
        <name evidence="9" type="ORF">CNY89_01220</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="6">Belongs to the class-I aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000041">
        <property type="protein sequence ID" value="PJN96665.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004818">
        <property type="term" value="F:glutamate-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006424">
        <property type="term" value="P:glutamyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.350">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045462">
        <property type="entry name" value="aa-tRNA-synth_I_cd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020751">
        <property type="entry name" value="aa-tRNA-synth_I_codon-bd_sub2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008925">
        <property type="entry name" value="aa_tRNA-synth_I_cd-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004527">
        <property type="entry name" value="Glu-tRNA-ligase_bac/mito"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020058">
        <property type="entry name" value="Glu/Gln-tRNA-synth_Ib_cat-dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020061">
        <property type="entry name" value="Glu_tRNA_lig_a-bdl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19269">
        <property type="entry name" value="Anticodon_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00749">
        <property type="entry name" value="tRNA-synt_1c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48163">
        <property type="entry name" value="SSF48163"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00464">
        <property type="entry name" value="gltX_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="3 6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 6 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4 6" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1c" evidence="7">
        <location>
            <begin position="20"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_2" evidence="8">
        <location>
            <begin position="212"/>
            <end position="345"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00749"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF19269"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96665.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="356" mass="39067" checksum="A050238EE9829023" modified="2018-04-25" version="1" fragment="single">NGRPPLFLSPWRDADPATWPDGPYTVRLKAPRAGETVVEDVVQGRVVFKNETLDDLILLRSDGAPTYMHAVVVDDHDMGVTHVIRGDDHLTNAARQSLIYKALGWEVPVWAHIPLIHGPDGSKMSKRHGAIGVEAYRDMGFLAEAMRNYLARLGWSHGNDEFFTTEQAVAWFDLDHLGKAPARFDFSKLTHLSGQHIRVAEDARLLAELESFLASQHLPPLTVAQHSALLRAMPGMKERAKTLPELLEMGRFALIERPIEADAAGMRLLDSASRGMLSRLTSRLQHASWAADQLEACVRDFAAEEGKGLGKVAQPIRAALTGRAVSPSVFDLMEILGREESIARLLDSAEAPAAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGR3</accession>
    <name>A0A2M9PGR3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome c oxidase subunit II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">coxB</name>
        <name evidence="13" type="ORF">CNY89_00765</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="11">
            <text>4 Fe(II)-[cytochrome c] + 8 H(+)(in) + O2 = 4 Fe(III)-[cytochrome c] + 4 H(+)(out) + 2 H2O</text>
            <dbReference type="Rhea" id="RHEA:11436"/>
            <dbReference type="Rhea" id="RHEA-COMP:10350"/>
            <dbReference type="Rhea" id="RHEA-COMP:14399"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15379"/>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
            <dbReference type="ChEBI" id="CHEBI:29034"/>
            <dbReference type="EC" id="7.1.1.9"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome c oxidase subunit 2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000023">
        <property type="protein sequence ID" value="PJN96745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd13912">
        <property type="entry name" value="CcO_II_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045187">
        <property type="entry name" value="CcO_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002429">
        <property type="entry name" value="CcO_II-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034210">
        <property type="entry name" value="CcO_II_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001505">
        <property type="entry name" value="Copper_CuA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014222">
        <property type="entry name" value="Cyt_c_oxidase_su2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22888">
        <property type="entry name" value="PTHR22888"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00116">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02866">
        <property type="entry name" value="CoxB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00078">
        <property type="entry name" value="COX2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50857">
        <property type="entry name" value="COX2_CUA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0186">Copper</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="10" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="COX2_CUA" evidence="12">
        <location>
            <begin position="11"/>
            <end position="147"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029368"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="164" mass="18400" checksum="6CE3C83A0981B6E3" modified="2018-04-25" version="1" fragment="single">PILFKQLEIPEPDLTIKATGNQWYWNYEYPDNEFSFDSILLPREDLQASGYTDDLYLLATDTALVVPVGAVVRMQMTGADVIHSWTVPAFGVKMDAVPGRLNETWFEVDRPGVYFGQCSELCGKDHAFMPITVKALEPADYEAWLNWAIDEYGGTRGENVAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH65</accession>
    <name>A0A2M9PH65_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00015</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000001">
        <property type="protein sequence ID" value="PJN96873.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="102"/>
            <end position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96873.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17807" checksum="3C2529035A25680C" modified="2018-04-25" version="1">MKFTWLGHSGFRIEIADQVLLVDPWLEGNPAFPEARRAEAITGATAILISHGHFDHIGGVPAIARELDIPIVGTFDLPALVDPGQHAARGRIELVATGRQRPQERPLDRSEVAGAEHVAQHQRRPCALRRGDRVQVDQPLAGQRRDRGVLGGLRGEDQPHQK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A2</accession>
    <name>A0A2M9P4A2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Cyclic pyranopterin monophosphate synthase</fullName>
            <ecNumber evidence="3">4.6.1.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_30480</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate</text>
            <dbReference type="Rhea" id="RHEA:49580"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:59648"/>
            <dbReference type="ChEBI" id="CHEBI:131766"/>
            <dbReference type="EC" id="4.6.1.17"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; molybdopterin biosynthesis.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.6.1.17" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01004805">
        <property type="protein sequence ID" value="PJN92348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0061799">
        <property type="term" value="F:cyclic pyranopterin monophosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006777">
        <property type="term" value="P:Mo-molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.640">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036522">
        <property type="entry name" value="MoaC_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002820">
        <property type="entry name" value="Mopterin_CF_biosynth-C_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01967">
        <property type="entry name" value="MoaC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55040">
        <property type="entry name" value="SSF55040"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0501">Molybdenum cofactor biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MoaC" evidence="5">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="domain" description="MoaC" evidence="5">
        <location>
            <begin position="33"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="68"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001637"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005046"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012575"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF01967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="68" mass="7291" checksum="FA7BFEFE355DA0B3" modified="2018-04-25" version="1" fragment="single">RLAGIMAAKRTADLIPLCHPLALTRVEVDLEPLGVARLAGIMAAKRTADLIPLCHPLALTRVEVDLEP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4A5</accession>
    <name>A0A2M9P4A5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004745">
        <property type="protein sequence ID" value="PJN92372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7341" checksum="3484F0ED9106133D" modified="2018-04-25" version="1" fragment="single">AELARELGRPAIIAPNGAVVEIAPARRASRAYRDRPDAELARELGRPAIIAPNGAVVEIAPARRASRAY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C5</accession>
    <name>A0A2M9P4C5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30145</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004690">
        <property type="protein sequence ID" value="PJN92392.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="15"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="63"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92392.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6067" checksum="B781839D28F0932F" modified="2018-04-25" version="1" fragment="single">MARMVPPGAEAGADLAAFLAMGGSLLAFVLAGAAHRPAMARMVPPGAEAGADLAAFLAMGGSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4D3</accession>
    <name>A0A2M9P4D3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase</fullName>
            <ecNumber evidence="3">2.7.6.3</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="11">6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="12">7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_30160</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="10">Catalyzes the transfer of pyrophosphate from adenosine triphosphate (ATP) to 6-hydroxymethyl-7,8-dihydropterin, an enzymatic step in folate biosynthesis pathway.</text>
    </comment>
    <comment type="pathway">
        <text evidence="1">Cofactor biosynthesis; tetrahydrofolate biosynthesis; 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 7,8-dihydroneopterin triphosphate: step 4/4.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HPPK family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.6.3" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01004694">
        <property type="protein sequence ID" value="PJN92390.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00077">
        <property type="reaction ID" value="UER00155"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003848">
        <property type="term" value="F:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046656">
        <property type="term" value="P:folic acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046654">
        <property type="term" value="P:tetrahydrofolate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.560">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000550">
        <property type="entry name" value="Hppk"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035907">
        <property type="entry name" value="Hppk_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01288">
        <property type="entry name" value="HPPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55083">
        <property type="entry name" value="SSF55083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00794">
        <property type="entry name" value="HPPK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0289">Folate biosynthesis</keyword>
    <keyword evidence="7" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HPPK" evidence="13">
        <location>
            <begin position="46"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="14">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005051"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005810"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00016218"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022909"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00029409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00029766"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00033413"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="PROSITE" id="PS00794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN92390.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6662" checksum="903563C707AFE3F7" modified="2018-04-25" version="1" fragment="single">MGRERSRRWAARVCDLDLIATDLEPEDLLATLHAVEAELGRERSRRWAARVCDLDLIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4L5</accession>
    <name>A0A2M9P4L5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29460</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004438">
        <property type="protein sequence ID" value="PJN92463.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="36"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92463.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="3932" checksum="79B6CCB0B6259949" modified="2018-04-25" version="1" fragment="single">MPTPRETILTALHARLLALPANALRGDVLPERVPVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4N9</accession>
    <name>A0A2M9P4N9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_29360</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004405">
        <property type="protein sequence ID" value="PJN92478.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN92478.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8587" checksum="6DD3DAEA6FDD69B6" modified="2018-04-25" version="1" fragment="single">VKIRDKDSRIVKNKAVYLALGITGDGEREVLGLWIAENEGAKFWLSVMTELRNRGVQDILIAVVDGLKGFPEAITAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S9</accession>
    <name>A0A2M9P4S9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Hybrid sensor histidine kinase/response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_28760</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004176">
        <property type="protein sequence ID" value="PJN92547.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0418">Kinase</keyword>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="30"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92547.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9602" checksum="7879744DF637B8EE" modified="2018-04-25" version="1" fragment="single">GFTFDVAQHGAEALIAWERRAYDLILMDVEMPVVEDNATNQFVLSLFLKRLGFTFDVAQHGAEALIAWERRAYDLILMDVEMPV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P502</accession>
    <name>A0A2M9P502_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Copper resistance protein CopZ</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004011">
        <property type="protein sequence ID" value="PJN92600.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008719">
        <property type="entry name" value="N2O_reductase_NosL"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41247">
        <property type="entry name" value="PTHR41247"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05573">
        <property type="entry name" value="NosL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="88"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92600.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9114" checksum="DE227BA16CDBAC3C" modified="2018-04-25" version="1" fragment="single">AVALLAALALAACKPEAEAPAPQAVTDAAIGHYCGMMLSEHGGPRGQIFVKGEETPVWFSSARDTVAFTLLPEEPKDIAAIYVSDMGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P535</accession>
    <name>A0A2M9P535_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28020</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003924">
        <property type="protein sequence ID" value="PJN92630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="10212" checksum="03034CDA413A8E49" modified="2018-04-25" version="1" fragment="single">VALGYAGSYNRVAAFARKWRADRQRDQQSAGRGVFVPLVFQPGEAFQFDWSEDWATIGGESTKLQVAHVKLSHSRAFLLRAYLLQTHEML</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P547</accession>
    <name>A0A2M9P547_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">FCD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_27960</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003907">
        <property type="protein sequence ID" value="PJN92638.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.530">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011711">
        <property type="entry name" value="GntR_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008920">
        <property type="entry name" value="TF_FadR/GntR_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07729">
        <property type="entry name" value="FCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48008">
        <property type="entry name" value="SSF48008"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="FCD" evidence="5">
        <location>
            <begin position="31"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF07729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN92638.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9850" checksum="46ED1058A098E9EA" modified="2018-04-25" version="1" fragment="single">RSGSTPSTRPSTARSASARASASPGRWCARTRRLTEADLDALGVVLNRQAEAVAAREKERFHALDEAFHREICERAGLGFAWALVRENKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P554</accession>
    <name>A0A2M9P554_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS21 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003784">
        <property type="protein sequence ID" value="PJN92681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="95"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="95" mass="10862" checksum="37FC0178617C7966" modified="2018-04-25" version="1" fragment="single">EEINAAIRPLLDEINARVMRAYGASRADLFATLDRPALSPLPDEPYVFARWSRPRVAPDYHVDIEGFFYSVPFGLIRETVDARATERTVEIFHRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A6</accession>
    <name>A0A2M9P5A6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27210</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003668">
        <property type="protein sequence ID" value="PJN92722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5792" checksum="841C52D0349621AF" modified="2018-04-25" version="1" fragment="single">RFSTLKSWGLKLAKTSGFKKARIAVARKMAVILHAMWKTNTPFRWSQEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5E8</accession>
    <name>A0A2M9P5E8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27095</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003633">
        <property type="protein sequence ID" value="PJN92738.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002611">
        <property type="entry name" value="IstB_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01695">
        <property type="entry name" value="IstB_IS21"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="IstB_IS21" evidence="1">
        <location>
            <begin position="2"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92738.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10856" checksum="E649BA3C6CBFF043" modified="2018-04-25" version="1" fragment="single">SQLLKAEVTEREVRSIAYHLKTARFPAYKDLAGFDFAASEVNEALVRQLHRCEFIDGAHNAVLIGGPGTGKSHVATALGVQAVEHHRRKVRFFSTIEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I4</accession>
    <name>A0A2M9P5I4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003485">
        <property type="protein sequence ID" value="PJN92783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10857" checksum="64714777CADA0B11" modified="2018-04-25" version="1" fragment="single">WAASTIDYSFPTTNIYGYTQLTDLPNGMFAVTLAQQNAAHFALNAEVGVNATAKAGFSVEGFTNLGVFNDLSPDGDDEIRLANTTSASLGTARVADFPGNYLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5L0</accession>
    <name>A0A2M9P5L0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Peptidase_M78 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26350</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003407">
        <property type="protein sequence ID" value="PJN92810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="59"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="105" mass="11358" checksum="2644FB78C0432C81" modified="2018-04-25" version="1" fragment="single">PKRAGSLACRLCAAIALARSARRIPGLALPHRGDRCSGIPSVPDRKRGRPPGSRIGADALPFIVVNRKDAYARRVFSLLHELAHLMLRQSGVSDLDADGPRRAED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M5</accession>
    <name>A0A2M9P5M5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25995</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003287">
        <property type="protein sequence ID" value="PJN92846.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bact_transglu_N" evidence="2">
        <location>
            <begin position="1"/>
            <end position="38"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="46"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="62"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92846.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8454" checksum="6B84DFB9B4C3E8BE" modified="2018-04-25" version="1" fragment="single">PDPAERRDFHDFFGNESIEVVFREAHDEIAFKVSSRIERLMLAPSLDISPDSPRLAQDESPAGATSAPTRRITSCP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R9</accession>
    <name>A0A2M9P5R9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25805</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003227">
        <property type="protein sequence ID" value="PJN92865.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92865.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="82" mass="8869" checksum="3FC303556E0897F9" modified="2018-04-25" version="1" fragment="single">TDEAEFSTDNLVQRVGPEVYSGEISDRLRLAAKTTLSVADQIGLDARSKAIFQRVVERLPASPALAELSQDLARATKEVVSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V5</accession>
    <name>A0A2M9P5V5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Abhydrolase_3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25465</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003121">
        <property type="protein sequence ID" value="PJN92909.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013094">
        <property type="entry name" value="AB_hydrolase_3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07859">
        <property type="entry name" value="Abhydrolase_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Abhydrolase_3" evidence="1">
        <location>
            <begin position="3"/>
            <end position="47"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07859"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92909.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7700" checksum="BADC413B04C5F466" modified="2018-04-25" version="1" fragment="single">AYLDSLAQAYLAGRDPRDPLVSPLFADLAGLPPVLIQVGSAETLLDDPSGPGRFPPCAYWISPGACHERAKHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5W5</accession>
    <name>A0A2M9P5W5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003120">
        <property type="protein sequence ID" value="PJN92910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010126">
        <property type="entry name" value="Esterase_phb"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10503">
        <property type="entry name" value="Esterase_PHB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11869" checksum="FB9E1B66533281C9" modified="2018-04-25" version="1" fragment="single">HGCGQDPEDFARGTGMNAAAEAEGVIVLYPSQPKDANPKRCWNWFRPEDQRRDGGETGLLVQLAREIVATENVDPDRVYVAGLSAWLRPGPGGLRPRHRHERRRRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Z8</accession>
    <name>A0A2M9P5Z8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_24930</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002971">
        <property type="protein sequence ID" value="PJN92966.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92966.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13892" checksum="919DD847041BCEA3" modified="2018-04-25" version="1" fragment="single">MRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSAPPPRCYRRAKAQFSTRDSSRRWMSDWGHVSTYDDQQHRAAGCNLVVAAITLWNTVYLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P632</accession>
    <name>A0A2M9P632_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002865">
        <property type="protein sequence ID" value="PJN93011.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93011.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="9137" checksum="169BE191BF2FAD60" modified="2018-04-25" version="1" fragment="single">MTDCSSGHRRHQDRDNFIGDYRSQYPSALHKDSIQFYTNKNIAPPSEDIVIRGNTIESADYRHGIFVFNELYREGNLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P657</accession>
    <name>A0A2M9P657_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA topoisomerase (ATP-hydrolyzing)</fullName>
            <ecNumber evidence="2">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_24350</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01002798">
        <property type="protein sequence ID" value="PJN93036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.670">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002288">
        <property type="entry name" value="DNA_gyrase_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013759">
        <property type="entry name" value="Topo_IIA_B_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00986">
        <property type="entry name" value="DNA_gyraseB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="DNA_gyraseB_C" evidence="4">
        <location>
            <begin position="79"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF00986"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="129" mass="14669" checksum="2DE1D131A4EDE0DC" modified="2018-04-25" version="1" fragment="single">EVATQDRGLRLWRVLRGVEELREIDGFALRSSEARRLAGMTGTLSEVYGEDAALVRRDREQRIDGPLDLLDAVMREGEKGLTLQRYKGLGEMNPDQLWETTLDPEARTLLQVRVEHADEADEVFTKLMG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P669</accession>
    <name>A0A2M9P669_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">GIDA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_24395</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002810">
        <property type="protein sequence ID" value="PJN93032.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050660">
        <property type="term" value="F:flavin adenine dinucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008033">
        <property type="term" value="P:tRNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002218">
        <property type="entry name" value="MnmG-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040131">
        <property type="entry name" value="MnmG_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11806">
        <property type="entry name" value="PTHR11806"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01134">
        <property type="entry name" value="GIDA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0274">FAD</keyword>
    <keyword evidence="2" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="5" id="KW-0520">NAD</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0819">tRNA processing</keyword>
    <feature type="domain" description="GIDA" evidence="6">
        <location>
            <begin position="1"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022694"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01134"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93032.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="12981" checksum="926973C7C9DA7F1C" modified="2018-04-25" version="1" fragment="single">MVVGGGHAGCEAAHAAWRLGAQVTLVTQNPARLGEMSCNPAIGGLGKGHLVREIDALDGLMARIGDRAAIQYRLLNRSKGPAVQGPRIQADRTLYIEAMQEELVRAKGLRILAGEVVDVLME</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6K7</accession>
    <name>A0A2M9P6K7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_18875</name>
        <name evidence="9" type="ORF">CNY89_20350</name>
        <name evidence="8" type="ORF">CNY89_22670</name>
        <name evidence="7" type="ORF">CNY89_22720</name>
    </gene>
    <organism evidence="7 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002356">
        <property type="protein sequence ID" value="PJN93204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002344">
        <property type="protein sequence ID" value="PJN93213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001809">
        <property type="protein sequence ID" value="PJN93500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001521">
        <property type="protein sequence ID" value="PJN93719.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN93719.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="10970" checksum="6E0E18086D559218" modified="2018-04-25" version="1" fragment="single">AALMDEAEPDVLAYMTFPQQHRAKLHSTNPLERVNGEIKRRTEVVGIFPNEAAITRLVGAILLEQNDEWAVQRSRYMTLETIAPIQDDPVIGLPAMAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6L5</accession>
    <name>A0A2M9P6L5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">N6_N4_Mtase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_22735</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002362">
        <property type="protein sequence ID" value="PJN93201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="3">
        <location>
            <begin position="5"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="16525" checksum="1AF223FDB65D536C" modified="2018-04-25" version="1" fragment="single">MCGKVRLVYIDPPFATQTVFHSRKLAHAYEDVFECYEYLEFMRERLIFLHKIMADDGSIYVISTPRWCFMSRLSWMKFFGLKNFRNCITRKKSNPKNYTRKQFGNVSDYIFVLYKIRSIRVEPPSRTLDRRARARIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N0</accession>
    <name>A0A2M9P6N0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22730</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002361">
        <property type="protein sequence ID" value="PJN93202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="12679" checksum="D58FA53222DB4513" modified="2018-04-25" version="1" fragment="single">RIIDDLRFNWQWGFQHVKKAEAQLEFLYAQTWIARRGWRGRENTPAECAAVSKAQEAFHAACARQVLIPAPALVDLNWKKRTWVFRQKATPEMLAAVEADETRVASRGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N7</accession>
    <name>A0A2M9P6N7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Flavodoxin_2 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22950</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002408">
        <property type="protein sequence ID" value="PJN93180.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.360">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003680">
        <property type="entry name" value="Flavodoxin_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029039">
        <property type="entry name" value="Flavoprotein-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02525">
        <property type="entry name" value="Flavodoxin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52218">
        <property type="entry name" value="SSF52218"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavodoxin_2" evidence="1">
        <location>
            <begin position="33"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02525"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93180.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="146" mass="15826" checksum="418A5504DD6A72F6" modified="2018-04-25" version="1" fragment="single">LGLVAKLKRERSIWFDNDMRDPAEVIGKLLNFLGAPMYNFSLPTALRSWFDHVLRAGETFSYSEAGPKGLLTGKKAVVIESRGGLYSEGPAQAIDFQEPYLRHLLGFIGITDVTFVRAEKIGYGPEARDGAIAAARAEIAAVTGGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q2</accession>
    <name>A0A2M9P6Q2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22585</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002325">
        <property type="protein sequence ID" value="PJN93226.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009744">
        <property type="entry name" value="VirC1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07015">
        <property type="entry name" value="VirC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93226.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13685" checksum="B916E95B1AEB68D0" modified="2018-04-25" version="1">MIPTAITSYDIDASVLTVEFIVDLLEREQLEETVIVGLLVTKLSHTLNKSREDDLAAIQDFPLFETKLRERDALTGMLQSGLLHLTLEQRRAQSTFAATHFQSAMREADRLVDEVLEIVEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q4</accession>
    <name>A0A2M9P6Q4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_22840</name>
        <name evidence="3" type="ORF">CNY89_25715</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003195">
        <property type="protein sequence ID" value="PJN92879.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002389">
        <property type="protein sequence ID" value="PJN93188.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="2">
        <location>
            <begin position="10"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92879.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93188.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7929" checksum="41981636CAD41E6C" modified="2018-04-25" version="1" fragment="single">MTTAIHPGALRHSRDRKRWTQEQLAEATKGKNKVSLPTIKRIESTKDGTYPANDRVAEGLAKALGVTLDELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Q9</accession>
    <name>A0A2M9P6Q9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Thioesterase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22640</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 4-hydroxybenzoyl-CoA thioesterase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002340">
        <property type="protein sequence ID" value="PJN93217.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029069">
        <property type="entry name" value="HotDog_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006683">
        <property type="entry name" value="Thioestr_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006684">
        <property type="entry name" value="YbgC/YbaW"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03061">
        <property type="entry name" value="4HBT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54637">
        <property type="entry name" value="SSF54637"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00051">
        <property type="entry name" value="TIGR00051"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4HBT" evidence="2">
        <location>
            <begin position="17"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005953"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93217.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8968" checksum="A2D87DB1BA0884ED" modified="2018-04-25" version="1" fragment="single">MHAFRLRVYYEDTDLAGIVYYANYLKFIERGRTEALIAGGVDQARLQAEEGIVFAVRRVEADYLAPARLQDELDVTTGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N1</accession>
    <name>A0A2M9P7N1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19880</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001709">
        <property type="protein sequence ID" value="PJN93566.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="23"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93566.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="203" mass="21962" checksum="5218C1E2EF6F5BBC" modified="2018-04-25" version="1" fragment="single">PALLASSSHAEHDLRELRPLLVADDVNEVVINPDGVVWAERADAEHMVKTGHRFPPGKVLQLSKHLAGETKNVLGPKHPIVSGSLHAFGQVLRVQIVVPPAVEDGASLSIRKYVSRILDVGEIGFLEGRQVSVEGERRARLAELAKLAEAGRLAELFQQAIDQRMNILVSGGTSSGKTTVARALLSLANRSERLVTIEDAREL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P4</accession>
    <name>A0A2M9P7P4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001715">
        <property type="protein sequence ID" value="PJN93562.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028994">
        <property type="entry name" value="Integrin_alpha_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69318">
        <property type="entry name" value="SSF69318"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="134"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93562.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="176" mass="18617" checksum="FC33583EBE3DC890" modified="2018-04-25" version="1" fragment="single">DLDGDGFLDLFVNHHGRAQRELVYGFATDAPRSVELEMTGDLHGASFFDIDQDGDADLLQAAGADRGRAIDPDDPVLWSQVNLNEGGVIDEANSVGDFGIEYALGRKRILGGVNLDGEIWLYVGVDSCAPTGCTRASSSCATRPRAATSPSRPSARPSPGRSPRASTSAPIPTWTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7S6</accession>
    <name>A0A2M9P7S6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protoporphyrinogen IX oxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="18" type="ORF">CNY89_15825</name>
        <name evidence="17" type="ORF">CNY89_19875</name>
    </gene>
    <organism evidence="17 19">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 19" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 19">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3 A + protoporphyrinogen IX = 3 AH2 + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:62000"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the HemJ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001708">
        <property type="protein sequence ID" value="PJN93568.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001120">
        <property type="protein sequence ID" value="PJN94216.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005265">
        <property type="entry name" value="HemJ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03653">
        <property type="entry name" value="UPF0093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0349">Heme</keyword>
    <keyword evidence="14" id="KW-0408">Iron</keyword>
    <keyword evidence="15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00006501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00017504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN93568.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="PJN94216.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="30" mass="3443" checksum="32DDBEC0E686FC14" modified="2018-04-25" version="1" fragment="single">SRSGRIYRAMNELPTLLLIVIVVMVVVRPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P843</accession>
    <name>A0A2M9P843_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18935</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001530">
        <property type="protein sequence ID" value="PJN93711.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93711.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8504" checksum="FD2486B3D8AF14B3" modified="2018-04-25" version="1" fragment="single">EDLDFGAGDRLVLSGFGPDTFSGSGVTLAEDGGAVSIASAAGLRSVVIEAEDVTARASADGDDLFVYIAHESDIAVLALVDYLV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P845</accession>
    <name>A0A2M9P845_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18975</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001538">
        <property type="protein sequence ID" value="PJN93705.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SBP_bac_5" evidence="2">
        <location>
            <begin position="6"/>
            <end position="230"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93705.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24887" checksum="5A30EC58DB8CB743" modified="2018-04-25" version="1" fragment="single">PDGSVLPGLAESWEPAPDGLSWVFHLREGATFHDGVALTAEDVAFSLDRAMAPDSLNAQKGLFEGINEVTAIDDTTVEIGLDRPKGDLLFNLAWGDAAIVSPASAETNRTNPVGTGPFRFQDWVQGDHVTLVRNPDYWGEPAKLDKVTFKFISDPTAAFAAMMAGDVDAFPVFPAPENLPQFAADPRFRVIVGSTEGETILAMNNAKPPFDDIRVREAIGHAIDRKAIIDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B0</accession>
    <name>A0A2M9P8B0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">C4-dicarboxylate ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_18645</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001489">
        <property type="protein sequence ID" value="PJN93750.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="7"/>
            <end position="28"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="48"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="87"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93750.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12566" checksum="1E0D6A0FB96CFA98" modified="2018-04-25" version="1" fragment="single">MLVSADALVSYALVWLDGLAAFLAARGIQAGFLLDWYRTNANSVTDATLMLFTIIVMLGAPWTLKVNEHVRVDLLYGMMSPRGKARLDIFGGLVFLLPMCLIMIGFTLPWALES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8I9</accession>
    <name>A0A2M9P8I9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18100</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001411">
        <property type="protein sequence ID" value="PJN93840.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93840.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8588" checksum="6C880A1F5660F5B4" modified="2018-04-25" version="1" fragment="single">MSRIWSWLRLGANCIMVVPALLVMPVIAVAFGTVGFEMLRDRSDVPDSMYRAVQLLGLNFEAPDQWIEARGGIPLLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R4</accession>
    <name>A0A2M9P8R4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">CbbX protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_17610</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001347">
        <property type="protein sequence ID" value="PJN93914.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041627">
        <property type="entry name" value="AAA_lid_6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000470">
        <property type="entry name" value="CbxX/CfqX_mono"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000641">
        <property type="entry name" value="CbxX/CfxQ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00004">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17866">
        <property type="entry name" value="AAA_lid_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00819">
        <property type="entry name" value="CBXCFQXSUPER"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00820">
        <property type="entry name" value="CBXXCFQX"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ATPase_AAA_core" evidence="3">
        <location>
            <begin position="2"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="domain" description="AAA_lid_6" evidence="4">
        <location>
            <begin position="95"/>
            <end position="156"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF17866"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93914.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="177" mass="20134" checksum="E13BBD280C7C18E3" modified="2018-04-25" version="1" fragment="single">GVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMDRFFQSNPGFRSRIAHHIDFPDYSDGELEQIAEAMLGDQGYVFSPEAAQVMARYIALRRDQPHFANARSIRNALDRARLRQANRLFTRSEGPIDAQTLSRIEAEDISVSRVFSGGLKIGAGETENDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y9</accession>
    <name>A0A2M9P8Y9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">D-amino acid dehydrogenase small subunit</fullName>
            <ecNumber evidence="2">1.4.99.6</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.4.99.6" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001264">
        <property type="protein sequence ID" value="PJN94018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006076">
        <property type="entry name" value="FAD-dep_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01266">
        <property type="entry name" value="DAO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DAO" evidence="1">
        <location>
            <begin position="2"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="29949" checksum="DC9589427E464F87" modified="2018-04-25" version="1" fragment="single">MRVLILGGGVIGATTAYYLARSGHEVTVVDRQPGPGLETSFANAGQVSPGYSAPWAGPGVPLKAIQWLLMNHSPLVIKPTLDPALWRWGAQMLRNCTAARYKVNKARMVRIAEYSRDCLKALREDIGISYDDRAMGTIQLFRTQKQLDGVGKDVEILKKSGVPFEVLDRAGYVAHEPALAEVQEKFVGALRLPGDETGDCFKFTNAIAEAAMRLGADFRFGVTIEGLETTGGEITGVRTDAGTLTADRYVLALGSYSTKMLAPIGIRVPVYPVKGFS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P963</accession>
    <name>A0A2M9P963_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Polyphenol oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_16605</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>adenosine + H(+) + H2O = inosine + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:24408"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="EC" id="3.5.4.4"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="4">
            <dbReference type="Rhea" id="RHEA:24409"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>adenosine + phosphate = adenine + alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:27642"/>
            <dbReference type="ChEBI" id="CHEBI:16335"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="2">
            <dbReference type="Rhea" id="RHEA:27643"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>inosine + phosphate = alpha-D-ribose 1-phosphate + hypoxanthine</text>
            <dbReference type="Rhea" id="RHEA:27646"/>
            <dbReference type="ChEBI" id="CHEBI:17368"/>
            <dbReference type="ChEBI" id="CHEBI:17596"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57720"/>
            <dbReference type="EC" id="2.4.2.1"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="1">
            <dbReference type="Rhea" id="RHEA:27647"/>
        </physiologicalReaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>phosphate + S-methyl-5'-thioadenosine = adenine + S-methyl-5-thio-alpha-D-ribose 1-phosphate</text>
            <dbReference type="Rhea" id="RHEA:11852"/>
            <dbReference type="ChEBI" id="CHEBI:16708"/>
            <dbReference type="ChEBI" id="CHEBI:17509"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58533"/>
            <dbReference type="EC" id="2.4.2.28"/>
        </reaction>
        <physiologicalReaction direction="left-to-right" evidence="3">
            <dbReference type="Rhea" id="RHEA:11853"/>
        </physiologicalReaction>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the purine nucleoside phosphorylase YfiH/LACC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001213">
        <property type="protein sequence ID" value="PJN94087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004000">
        <property type="term" value="F:adenosine deaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017061">
        <property type="term" value="F:S-methyl-5-thioadenosine phosphorylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd16833">
        <property type="entry name" value="YfiH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.140.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003730">
        <property type="entry name" value="Cu_polyphenol_OxRdtase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038371">
        <property type="entry name" value="Cu_polyphenol_OxRdtase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011324">
        <property type="entry name" value="Cytotoxic_necrot_fac-like_cat"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30616">
        <property type="entry name" value="PTHR30616"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02578">
        <property type="entry name" value="Cu-oxidase_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF64438">
        <property type="entry name" value="SSF64438"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <keyword evidence="8" id="KW-0862">Zinc</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001600"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007353"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11435" checksum="16228EC2044D7AF2" modified="2018-04-25" version="1" fragment="single">RAERIRTAVGPTISQRAYEVGQEFLDAFAVEDPAYLRHFANGADGRYQFDLPGFVLARLRAAGVAEAGSIGACTYSDPTRFYSFRRTTHAGEVDYGRLISAITL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D2</accession>
    <name>A0A2M9P9D2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001187">
        <property type="protein sequence ID" value="PJN94119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13477" checksum="6BF6E8A190D90B26" modified="2018-04-25" version="1">MGERPASDLVEGPLWRRLTLHDQALVLAVGAAVVPPIPDPQEVQDALDMVRALLPLVSRDHVLMRDLAVAAGGLVEHWPDRRRRIEEGAFNAWARAQHDAAAALGAVMRVRAVQAFGKAVQGVGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I6</accession>
    <name>A0A2M9P9I6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15870</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001126">
        <property type="protein sequence ID" value="PJN94206.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94206.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9975" checksum="22ECC01074CB80BE" modified="2018-04-25" version="1" fragment="single">THSVDEALLLADRILLLSPRPGRVVEELSVPFRRPRSTFDPRTDAAFPALRRHLWDRLRAMVLSDPNSDFFETPVAGIPICDEFSSSGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9K2</accession>
    <name>A0A2M9P9K2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15760</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001112">
        <property type="protein sequence ID" value="PJN94227.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94227.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15613" checksum="FAE3B649B29FFCD1" modified="2018-04-25" version="1" fragment="single">MWGQIIGAGAGIASGILGSRGAKDAAKEQAWIAKKQIKFAKKQWNRQNEIQKQLYGDQSQAITQARDAGIGSARSNMEDQRDYARWQRTAGQEDARTAYDRNSALNRNALAATTGIYTDARDRSIAGLRGAEDRSLQDLRQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V2</accession>
    <name>A0A2M9P9V2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001053">
        <property type="protein sequence ID" value="PJN94314.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94314.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="9368" checksum="18A54771460CDE73" modified="2018-04-25" version="1" fragment="single">MRAIWLAMPALAILAGCQDVPGRDPVMADPTATCERRLQDYDQAALFFSSSDWGRNQTIPMQIQRAAQAAREAGCVTGGDVTDRLAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA21</accession>
    <name>A0A2M9PA21_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">6,7-dimethyl-8-ribityllumazine synthase</fullName>
            <ecNumber evidence="4">2.5.1.78</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14825</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2S)-2-hydroxy-3-oxobutyl phosphate + 5-amino-6-(D-ribitylamino)uracil = 6,7-dimethyl-8-(1-D-ribityl)lumazine + H(+) + 2 H2O + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26152"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15934"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58201"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="2.5.1.78"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Cofactor biosynthesis; riboflavin biosynthesis; riboflavin from 2-hydroxy-3-oxobutyl phosphate and 5-amino-6-(D-ribitylamino)uracil: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the DMRL synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.78" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01001012">
        <property type="protein sequence ID" value="PJN94386.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00404"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009349">
        <property type="term" value="C:riboflavin synthase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000906">
        <property type="term" value="F:6,7-dimethyl-8-ribityllumazine synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.960">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00178">
        <property type="entry name" value="Lumazine_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034964">
        <property type="entry name" value="LS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002180">
        <property type="entry name" value="LS/RS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036467">
        <property type="entry name" value="LS/RS_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21058">
        <property type="entry name" value="PTHR21058"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00885">
        <property type="entry name" value="DMRL_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52121">
        <property type="entry name" value="SSF52121"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0686">Riboflavin biosynthesis</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012664"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94386.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="18134" checksum="4B882B3AA45E5F39" modified="2018-04-25" version="1" fragment="single">MAERDTGHGLAAPVLDAPTRVLIVAAPFYRALADQLIAGARAALEAAGVEIDLVEVPGALEIPTAIRLASYSSLYDGYVALGCVIRGETTHYDTVCNDSSRGLTLLGLEGLCIGNGILTVENLAQGEARADAAGMNKGGGAAEACLHLGNGILTVENLAQGEARADAAGMNKGGGAAEAC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA63</accession>
    <name>A0A2M9PA63_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">CoA ester lyase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_14675</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the HpcH/HpaI aldolase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000997">
        <property type="protein sequence ID" value="PJN94411.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016829">
        <property type="term" value="F:lyase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005000">
        <property type="entry name" value="Aldolase/citrate-lyase_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011206">
        <property type="entry name" value="Citrate_lyase_beta/mcl1/mcl2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015813">
        <property type="entry name" value="Pyrv/PenolPyrv_Kinase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040442">
        <property type="entry name" value="Pyrv_Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03328">
        <property type="entry name" value="HpcH_HpaI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF015582">
        <property type="entry name" value="Cit_lyase_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51621">
        <property type="entry name" value="SSF51621"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HpcH_HpaI" evidence="6">
        <location>
            <begin position="15"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="76"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4 5">
        <location>
            <position position="141"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR015582-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRSR" id="PIRSR015582-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03328"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94411.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="324" mass="34654" checksum="5F0E5C248174CE4D" modified="2018-04-25" version="1">MSFTVPPQAPARPNRCQLFGPGSRPELFEKMAASAADVINLDLEDSVSPADKAAARQNIILAINEIDWGTKTLSVRINGLDTEFWYRDVVEILEQAGERIDLFMIPKAGTASDIYAVDALASAIETAKGRRKKVGFEVIIETALGFRNVAEIATASPRMQAMSLGAADFAASMGMQTTGIGGTQENYYMLAPKEDGGPRTPVWGDPWHGVTAAIVSACRSAGILPVDGPFGDFSDDEGFLAQARRAATMGMVGKWAIHPKQVALANSVFTPSEAQVTEARNILAAMQEAEEKGQGAAVYKGRLIDLASIRQAHVIVRQSEMIAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA74</accession>
    <name>A0A2M9PA74_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">XRE family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14470</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000973">
        <property type="protein sequence ID" value="PJN94443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024467">
        <property type="entry name" value="Xre/MbcA/ParS-like_toxin-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09722">
        <property type="entry name" value="DUF2384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF2384" evidence="2">
        <location>
            <begin position="86"/>
            <end position="132"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="14316" checksum="434F1EE56D09A76D" modified="2018-04-25" version="1">MADPAKRPRPGEPAPRNGLKGAGGIRAQLDGAIRADHLAAVLGVSKAQLAQAAGIQQATLAKTARSAGPRAQARLREMMEILVRIEVWAGGEAQALSWYRAEPIPAFGGRTAEALVKEGRAGAVRDYLDHVALGGYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA94</accession>
    <name>A0A2M9PA94_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cation acetate symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_14365</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000962">
        <property type="protein sequence ID" value="PJN94460.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006814">
        <property type="term" value="P:sodium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1730.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038377">
        <property type="entry name" value="Na/Glc_symporter_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001734">
        <property type="entry name" value="Na/solute_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018212">
        <property type="entry name" value="Na/solute_symporter_CS"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00457">
        <property type="entry name" value="NA_SOLUT_SYMP_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50283">
        <property type="entry name" value="NA_SOLUT_SYMP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0915">Sodium</keyword>
    <keyword evidence="7" id="KW-0739">Sodium transport</keyword>
    <keyword evidence="4" id="KW-0769">Symport</keyword>
    <keyword evidence="3 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="25"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="61"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00006434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022847"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94460.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="11631" checksum="D7EA1D57E93F50EF" modified="2018-04-25" version="1" fragment="single">GLAASSLFPALMMGIFSKRVNKEGAIAGMLVGVITTAVYVFLFKGWFFIPGTAPLPDTPAGWFFGINPLGFGAIGAALNFATAYVVSGLTASPPAHIQELVDNVRVPRTASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB8</accession>
    <name>A0A2M9PAB8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14355</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000961">
        <property type="protein sequence ID" value="PJN94461.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94461.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="218" mass="23471" checksum="F5EC5453EE265BBB" modified="2018-04-25" version="1">MHLEQYDRIRDRIAAEGWTPAIETQIALFICAAKAVNLPFLALAGAAVPPVFAWPGFSGGTQDAGPGGVVWQYLNAQLFRESEALTLLCRITRWSPDPWVYARSMAIVAPISAEAARVGLSSLQRDGQTPGLETLAFGHALLAQVRLAPIIPPSEAQAPFAVALTRIEQENGRLLQTQIRLLKDGYAETPLAEREAVIAAKVALVEAAFGRFLDSLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAB9</accession>
    <name>A0A2M9PAB9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Arc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000957">
        <property type="protein sequence ID" value="PJN94469.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005569">
        <property type="entry name" value="Arc_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013321">
        <property type="entry name" value="Arc_rbn_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03869">
        <property type="entry name" value="Arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arc" evidence="1">
        <location>
            <begin position="10"/>
            <end position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94469.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="8082" checksum="0FF9A47C9D0E2545" modified="2018-04-25" version="1">MVEEQNRSWTDRYMLRFPDGMREQIKRLAEANNRSMNAEIISALEFHLSQNKIEELRAKHPPASHKSSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK1</accession>
    <name>A0A2M9PAK1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13700</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000897">
        <property type="protein sequence ID" value="PJN94575.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001761">
        <property type="entry name" value="Peripla_BP/Lac1_sug-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00532">
        <property type="entry name" value="Peripla_BP_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="10"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94575.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="213" mass="22729" checksum="109FB18EDE8E1C77" modified="2018-04-25" version="1" fragment="single">METEGRRERVTLLDVAREAGVSRATASLVIRKSPLVAEATRLKVEETLDRLGYVYNMGAASMRAARSNTVGVVIPNLGNPFFAELLSGIEQALEDAGMVVVLANSRESAAKQEKIIQRMRERGVDGLIVCPATQTRAALLAKAASWGLPIVQALRHISDSKGDYAGADYAGGMRQAVDHLVGLGHRRILFVAAGAMHSAHAERLAGFRAAAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY6</accession>
    <name>A0A2M9PAY6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12920</name>
        <name evidence="1" type="ORF">CNY89_24140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002739">
        <property type="protein sequence ID" value="PJN93055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000820">
        <property type="protein sequence ID" value="PJN94703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11041" checksum="400586CE42714816" modified="2018-04-25" version="1" fragment="single">AGRTYYIEVVGSGGNPLPDSVVSLYRNGNFITYDDQGGGGNDSRIVYTATQTGNFQVEVGGYADFYTGDYHLLVNEDDYKGTVDLETNGYNFNTMATAPSVQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ9</accession>
    <name>A0A2M9PAZ9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Ribonuclease E/G</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_12835</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000812">
        <property type="protein sequence ID" value="PJN94717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004540">
        <property type="term" value="F:ribonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006396">
        <property type="term" value="P:RNA processing"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019307">
        <property type="entry name" value="RNA-bd_AU-1/RNase_E/G"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004659">
        <property type="entry name" value="RNase_E/G"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30001">
        <property type="entry name" value="PTHR30001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10150">
        <property type="entry name" value="RNase_E_G"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00757">
        <property type="entry name" value="RNaseEG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="485"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="485" mass="54624" checksum="65B81D2DC0415F2D" modified="2018-04-25" version="1" fragment="single">GDDVAEERSAPRRQSRARRYKIQEVVKVRQILLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKEISSSITVPEGAGLIIRTAGAARTKTEIRRDYEFLIRQWEQIRELTLKSIAPAPIYEEGSLIKRAIRDLYSREMDEILVDGERGYREAKDYMKMLMPSHAKNVKHYAEQTPLFSKFQVESYLSAMFNPVVQLKSGGYIVIDVTEALVAIDVNSGRATREASIEDTALKTNLEAAEEAARQMRLRDLAGLIVIDFIDMEDRRNNAAVEKRLKEKLKSDRARIQLGRISGFGLMEMSRQRLRPGMIEATTKPCPHCHGTGLVRSDDSLALALLREVEEEGVRQRSKEVLIVAPVDIANYLLNQKREHVAMIELRFGLSVRVEGDASLISPDYRIERFKTASRIVPVAPTLGLPKVAYPEIEEEPEVEEEERFKTASRIVPVAPTLGLPKVAYPEIEEEPEVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB92</accession>
    <name>A0A2M9PB92_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12320</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000763">
        <property type="protein sequence ID" value="PJN94803.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025427">
        <property type="entry name" value="DUF4160"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13711">
        <property type="entry name" value="DUF4160"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94803.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7904" checksum="E0F026C05E6859F4" modified="2018-04-25" version="1" fragment="single">MPTLLREGSYRFFFYSDEGDPREPPHVHVTAGDQIAKFWLDPVELASSKRLRAHEINELRNLVERHQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB97</accession>
    <name>A0A2M9PB97_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Phosphopantetheine--protein transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12265</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000759">
        <property type="protein sequence ID" value="PJN94810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10617" checksum="5389BCF0CDDB4BBE" modified="2018-04-25" version="1" fragment="single">KVDENKSMQRGLLDLMRQIYGNAMIRTPLKDSAEIDNATARLMTVYELSGPITSKQVRDRCLTYLDGVCGEIELDIRRTWPSHLGRLRKEGHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF7</accession>
    <name>A0A2M9PBF7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage baseplate protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11895</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000723">
        <property type="protein sequence ID" value="PJN94871.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007048">
        <property type="entry name" value="IraD/Gp25-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04965">
        <property type="entry name" value="GPW_gp25"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GPW_gp25" evidence="1">
        <location>
            <begin position="16"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04965"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94871.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12201" checksum="DECD86CD4C9EFCD1" modified="2018-04-25" version="1">MNGLDRITARLMTPDAHLAQSIGDILSTPVGTRVMRRDYGSDLPALIDAPINGETLIDVYQATAEALDRWEPRFRLRRVEVAAAAAGRLSLALFGDVDHGAINLTVDVSGGVTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBV2</accession>
    <name>A0A2M9PBV2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000647">
        <property type="protein sequence ID" value="PJN95015.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95015.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6205" checksum="683587C9FE460A16" modified="2018-04-25" version="1" fragment="single">MASVTGAGFSPERTTVSILLAASFCHMLNDIMQALLTSLYPLLKANYALDFAQIGLLT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBZ3</accession>
    <name>A0A2M9PBZ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10955</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000644">
        <property type="protein sequence ID" value="PJN95022.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="43"/>
            <end position="62"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95022.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="62" mass="6761" checksum="307FC4C65B167F1A" modified="2018-04-25" version="1">MPDMTSESQESPPSPPAGEADAPRSEARRRAIAYLDLWERQLAQVASDGVTPSRLPADRRIG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCB9</accession>
    <name>A0A2M9PCB9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000566">
        <property type="protein sequence ID" value="PJN95186.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95186.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7902" checksum="F5197F793C927F48" modified="2018-04-25" version="1" fragment="single">MKLLKDWADFADAYMRMNMAAVEVIVRRTQKMAMGAMTPPEALAMVLEKPTVFAAATERATVAAARGADALTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCI6</accession>
    <name>A0A2M9PCI6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Ornithine cyclodeaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09540</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000528">
        <property type="protein sequence ID" value="PJN95255.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1780.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003462">
        <property type="entry name" value="ODC_Mu_crystall"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023401">
        <property type="entry name" value="ODC_N"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13812">
        <property type="entry name" value="PTHR13812"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02423">
        <property type="entry name" value="OCD_Mu_crystall"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001439">
        <property type="entry name" value="CryM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95255.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="320" mass="33473" checksum="A221994AEE18A58C" modified="2018-04-25" version="1">MYIVPEEACPGLLSLDDAFPAVEAVFAAMARGDAYNFPVVREAIGYEDALYGFKGGFDKAGLTLGLKAGGYWPNNQKHGLINHQSTVFLFDPDTGRVHAMVGGNYLTAARTAASCAVSIAHLARKDAKVLGMVGAGHQATFQLRAAAKQRDFEKVIAWNLHPEMLPKLGAVAEEIGLPFEAVSLEGLREADVIVTITSSFAPTLMAAHVSPGTHLACMGTDTKGKQEIEAKLLASATVFTDEVAQAISIGESQHAVAAGLIAEGDVTPIGAVINGDHPGRSSDAQITLFDGTGVGLQDLAVAARVVEIARERGLAIEVAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY4</accession>
    <name>A0A2M9PCY4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">SF3 helicase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08865</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000479">
        <property type="protein sequence ID" value="PJN95372.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000166">
        <property type="term" value="F:nucleotide binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006500">
        <property type="entry name" value="DNA_primase_phage/plasmid"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014015">
        <property type="entry name" value="Helicase_SF3_DNA-vir"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014818">
        <property type="entry name" value="Phage/plasmid_primase_P4_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08706">
        <property type="entry name" value="D5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00885">
        <property type="entry name" value="D5_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01613">
        <property type="entry name" value="primase_Cterm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51206">
        <property type="entry name" value="SF3_HELICASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SF3 helicase" evidence="3">
        <location>
            <begin position="267"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="562"/>
            <end position="590"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="2">
        <location>
            <begin position="562"/>
            <end position="581"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51206"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95372.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="590" mass="66103" checksum="4E99ADEE8F7D8C85" modified="2018-04-25" version="1">MTDWMDDMPPPPDPDPVEPDPAETAEELLRERLLEGGRKTLNDYGNGQRVVLYHGEDLLHVTRLGWHVWDGHVWEEDFDKIAVRRRAHQIGDLVKREAFALRMPDLEAAIVAQAEETAAQLLALTAKAKAGLSEDEAAEMARLRQLEKSAKEILAKATKRRAGHLSHAKSAGNTAAIGNMLVEAIPYLSRPAKSLNCDPLAINTESQTLQLVQVDVGGEREAWEYAVEARLQSREDLITKRMPVIYDPTAEAPVFMRFLERIQPEPEMRAFLQRWFGYSLTGLTSEQKLVFLHGGGRNGKSTLVDLVAKLMGEYATSMPIETLTGSDTRKGSEATPDLVRLPGARMVRASEPEKGVQFKEALIKLLTGGEPILIRKMREEFVEVDPVFKLTISGNSKPEVRGTDDGIWRRLLLVPFDVQVPKEEVDLLLPAKLWAERSGVLNWLIDGALDYLNGGLREPEHVMTATEEFREDSDPIRTFLVDACRVTGLPEDFELARDLVEAFQLWQRDQGGASWGNRTVQNRLAEKAEVFRIDGQVYSRRRSAQSTGYSGIRLTDDMERRLREVRAEGGDRRRPKGEGRSGGPDAGDLM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD19</accession>
    <name>A0A2M9PD19_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000454">
        <property type="protein sequence ID" value="PJN95430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11903" checksum="C5DCA56EF2CAC2B5" modified="2018-04-25" version="1">MVTVVENLSPEAQLIAPKDQAFYPAGTKIAVQAQASDPDGRIVRVDFQLSNMSVFADPVTVATVARPPYKTTIEGLTEGMWMLSAVAVDDAGVESQSTPAHFMVTPARKRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD37</accession>
    <name>A0A2M9PD37_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Succinyl-CoA--3-ketoacid-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08340</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the 3-oxoacid CoA-transferase subunit B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000440">
        <property type="protein sequence ID" value="PJN95465.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012791">
        <property type="entry name" value="3-oxoacid_CoA-transf_B"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01144">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00882">
        <property type="entry name" value="CoA_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02428">
        <property type="entry name" value="pcaJ_scoB_fam"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007047"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95465.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22049" checksum="E3AC8330BD74DB42" modified="2018-04-25" version="1">MPWDRNQMAARAAQELKDGMYVNLGIGIPTLVSNYIPEGVDVTLQSENGMLGMGPFPTEAELDADLINAGKQTITELDRTSYFSSADSFAMIRGGKIDMAILGAMEVSEKGDLANWMIPGKLVKGMGGAMDLVAGVRRVVVVMDHASKHGESKLLHDCTLPLTGRGVVDRIITNLGVFDVVEGGLTIVELADGVTEAEARAATEATLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD77</accession>
    <name>A0A2M9PD77_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08300</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000437">
        <property type="protein sequence ID" value="PJN95473.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009744">
        <property type="entry name" value="VirC1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07015">
        <property type="entry name" value="VirC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="178"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="201"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95473.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="201" mass="21763" checksum="C3D16FEF75074691" modified="2018-04-25" version="1" fragment="single">MKLISFVSLKGGAGKTTALSALCSALLARGRKVALLEGDENAPISQWRSYAKAAGRWDDTCQIYFAADLDSFEKAVVEAEKQGVEFMLADTHGGGSEINSIVVANSALVIVPTAITTYDIDEAVNTMEFVHDQIEEEGTNTLIALLVTKLPHTPNKSRQIEIDRLEVFPHASHQAAGSRCLRQYEEGRHAPPNRPRKGGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA6</accession>
    <name>A0A2M9PDA6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Lytic transglycosylase domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07930</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the virb1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000412">
        <property type="protein sequence ID" value="PJN95531.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008258">
        <property type="entry name" value="Transglycosylase_SLT_dom_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01464">
        <property type="entry name" value="SLT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SLT" evidence="2">
        <location>
            <begin position="18"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009387"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95531.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5388" checksum="9C990BE037DC95E0" modified="2018-04-25" version="1" fragment="single">MAEGVAAVYAQDPAVSEAGLRPAEFVRVFVALIDQESRFNPQALSPKGARG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF7</accession>
    <name>A0A2M9PDF7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Glycosyl transferase family 4</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_07795</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000401">
        <property type="protein sequence ID" value="PJN95554.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008963">
        <property type="term" value="F:phospho-N-acetylmuramoyl-pentapeptide-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000715">
        <property type="entry name" value="Glycosyl_transferase_4"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR22926">
        <property type="entry name" value="PTHR22926"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00953">
        <property type="entry name" value="Glycos_transf_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7" id="KW-0808">Transferase</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="59"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="81"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="111"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="169"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="195"/>
            <end position="213"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="242"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="248"/>
            <end position="266"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="306"/>
            <end position="328"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="334"/>
            <end position="351"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95554.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="369" mass="39746" checksum="8DAD578AB163D532" modified="2018-04-25" version="1">MRGDMGQIVQDVAGPALVGLLLSLLVSIALILTERLHARFSHDHVVGVQKFHKRPVPRIGGAAIAVGYVLIWPWLPEAIAGTWALIGLAGLPAFAAGLAEDLTKRVGVKARLIATMISGLIFALLTGYVMNQVDLPGMDWLLSITVFGYLFTAFAMGGVANAVNIIDGFNGLAAGSLLIMLAAFAWVGLQVGDELVVSLAVLYGALVLGFFLVNFPFGRIFLGDGGAYFAGYLLATLGVLLPARNPEISAWTAILICGYPVIETLASMRRKASREGHSVGKPDRVHFHMLAHRRYARRIAKGRKHLRNPATSVVTWTLPLITTAFVMISWSSALLSALFFFATVAIYGWIYRIMSLNGPRLPGALARLL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG9</accession>
    <name>A0A2M9PDG9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uracil-DNA glycosylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07645</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000390">
        <property type="protein sequence ID" value="PJN95579.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95579.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="41" mass="4228" checksum="15B4D85D50145F36" modified="2018-04-25" version="1" fragment="single">MSVPDAYAADLAALAWLVELGADEAVAETPVDRFALAEAPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH4</accession>
    <name>A0A2M9PDH4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Aldehyde dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07680</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000393">
        <property type="protein sequence ID" value="PJN95573.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016620">
        <property type="term" value="F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="2">
        <location>
            <begin position="1"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95573.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15078" checksum="1030488BE9038F18" modified="2018-04-25" version="1" fragment="single">VDAAVTAGAEVLTGGGRMDAPGYFFTPTLLAGVGPDSAAVREEIFGPVLTLQTFETEEEAMRLADHPTYGLCAGVFTRDLSRALRAMRRIEAGTVWINRYGRSRDHILATGGYKSSGIGKDLGREAYRASRRAKSVLIDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK8</accession>
    <name>A0A2M9PDK8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07295</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000366">
        <property type="protein sequence ID" value="PJN95635.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95635.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="206" mass="21580" checksum="8220A68A292C461F" modified="2018-04-25" version="1" fragment="single">NPPGTPGAMPFATHVTMGAMVFTPADLAAACPVMTMHRGENSNTGRWGIWLTAAGAPYVYMRMDSASPRQAGSIAEVAANTAVHPAESSDAVRGTWRMIIAQLKVESVDTVADTAPPTATTRGAGAHLSLWVDGDLALSTDVDISSFRGSNGLAWQASRTVLGAAYSAATRQAGSPVTIGRSFFTLEPLAYGDPKWWEITSWLGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU5</accession>
    <name>A0A2M9PDU5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06905</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the PEP-utilizing enzyme family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000338">
        <property type="protein sequence ID" value="PJN95706.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016772">
        <property type="term" value="F:transferase activity, transferring phosphorus-containing groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009401">
        <property type="term" value="P:phosphoenolpyruvate-dependent sugar phosphotransferase system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.274.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.450.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003018">
        <property type="entry name" value="GAF"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029016">
        <property type="entry name" value="GAF-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036637">
        <property type="entry name" value="Phosphohistidine_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008731">
        <property type="entry name" value="PTS_EIN"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036618">
        <property type="entry name" value="PtsI_HPr-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13185">
        <property type="entry name" value="GAF_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05524">
        <property type="entry name" value="PEP-utilisers_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00065">
        <property type="entry name" value="GAF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47831">
        <property type="entry name" value="SSF47831"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52009">
        <property type="entry name" value="SSF52009"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GAF" evidence="2">
        <location>
            <begin position="25"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="367"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007837"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95706.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="367" mass="40406" checksum="97654E790918554A" modified="2018-04-25" version="1" fragment="single">MPYSEAVDSRVLLRRLRDTLAEGGGGQERLDRIVSLIATGLVAEVCSVYLRREDQWLELCATQGLNSQAVHQSRLRVGQGLVGRIADSAEPINTRDAPNTRGYRYLPETGEEVYSSFLGVPIQRLGEVLGVLVVQNREAREYCDDEVYALEVVAMVLAEMAELGAFVGPGPMSIAAQHSLPVAFKGLVGQEGVAEGHVLLHEPQIVISNPVSDDPVREYARLHAAIERLRAEVDEMLAADHLTASGEHRDVLQAYRMFAHDKGWVRRMEASIDSGLAAEVAVEKEQSATRTRMSRVADPYLRERLHDLDDLSNRLLRLLAGVDQPKGREIPQDAILIARNIGPAELLDYGRRLRGVVLEEGSVGSHA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ7</accession>
    <name>A0A2M9PDZ7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Isocitrate dehydrogenase [NADP]</fullName>
            <ecNumber evidence="8">1.1.1.42</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="14" type="ORF">CNY89_06630</name>
    </gene>
    <organism evidence="14 15">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="14 15" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="14 15">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="8">
            <text>D-threo-isocitrate + NADP(+) = 2-oxoglutarate + CO2 + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19629"/>
            <dbReference type="ChEBI" id="CHEBI:15562"/>
            <dbReference type="ChEBI" id="CHEBI:16526"/>
            <dbReference type="ChEBI" id="CHEBI:16810"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.1.1.42"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="8 11">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
        <cofactor evidence="8 11">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
        <text evidence="8 11">Binds 1 Mg(2+) or Mn(2+) ion per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the isocitrate and isopropylmalate dehydrogenases family.</text>
    </comment>
    <comment type="caution">
        <text evidence="14">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.1.1.42" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000318">
        <property type="protein sequence ID" value="PJN95756.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004450">
        <property type="term" value="F:isocitrate dehydrogenase (NADP+) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006102">
        <property type="term" value="P:isocitrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006099">
        <property type="term" value="P:tricarboxylic acid cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019818">
        <property type="entry name" value="IsoCit/isopropylmalate_DH_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004790">
        <property type="entry name" value="Isocitrate_DH_NADP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024084">
        <property type="entry name" value="IsoPropMal-DH-like_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11822">
        <property type="entry name" value="PTHR11822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00180">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000108">
        <property type="entry name" value="IDH_NADP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01329">
        <property type="entry name" value="Iso_dh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00127">
        <property type="entry name" value="nadp_idh_euk"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00470">
        <property type="entry name" value="IDH_IMDH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 8 11" id="KW-0460">Magnesium</keyword>
    <keyword evidence="7 8 11" id="KW-0464">Manganese</keyword>
    <keyword evidence="3 8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 8 12" id="KW-0521">NADP</keyword>
    <keyword evidence="6 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="15" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0816">Tricarboxylic acid cycle</keyword>
    <feature type="domain" description="Iso_dh" evidence="13">
        <location>
            <begin position="9"/>
            <end position="394"/>
        </location>
    </feature>
    <feature type="region of interest" description="Substrate binding" evidence="10">
        <location>
            <begin position="94"/>
            <end position="100"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="75"/>
            <end position="77"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="77"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="82"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="109"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="10">
        <location>
            <position position="132"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="258"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <begin position="308"/>
            <end position="313"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="326"/>
        </location>
        <ligand>
            <name>NADP(+)</name>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
        </ligand>
    </feature>
    <feature type="site" description="Critical for catalysis" evidence="9">
        <location>
            <position position="139"/>
        </location>
    </feature>
    <feature type="site" description="Critical for catalysis" evidence="9">
        <location>
            <position position="210"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00007769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRNR" id="PIRNR000108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR000108-4"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="13">
        <source>
            <dbReference type="SMART" id="SM01329"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="EMBL" id="PJN95756.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="403" mass="45004" checksum="90C3218C63C9CB61" modified="2018-04-25" version="1">MGKIKVANPVVELDGDEMTRIIWDFIKQKLILPYLDIDLHYYDLGIEERDRTDDQITIDAANAILKYGVGVKCATITPDEARVEEFGLKQMWKSPNGTIRNILGGVIFRQPIICKNVPRLVPGWTKPIVVGRHAFGDQYRATDFRFPGKGTVTLKFVGEDGEVIEREVFKAPSAGVTLAMYNLDDSIRDFARASLNYGLNLGWPVYLSTKNTILKAYDGRFKDLFQEVFDAEFAEAFKAKGIIYEHRLIDDMVASAMKWEGGYVWACKNYDGDVQSDTVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYREHQKGKETSTNSIASIYAWTGGLKHRAKLDDNAELLRFAEELEKVTVATVEAGDMTKDLALLVGPEQKWLTTTGFLDKVDQNLQKALA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE00</accession>
    <name>A0A2M9PE00_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">ATP-dependent protease subunit HslV</fullName>
            <ecNumber evidence="7">3.4.25.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">hslV</name>
        <name evidence="8" type="ORF">CNY89_06515</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>ATP-dependent cleavage of peptide bonds with broad specificity.</text>
            <dbReference type="EC" id="3.4.25.2"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="7">Allosterically activated by HslU binding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">A double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer. The assembly of the HslU/HslV complex is dependent on binding of ATP.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the peptidase T1B family. HslV subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.4.25.2" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000309">
        <property type="protein sequence ID" value="PJN95777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009376">
        <property type="term" value="C:HslUV protease complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005839">
        <property type="term" value="C:proteasome core complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004298">
        <property type="term" value="F:threonine-type endopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051603">
        <property type="term" value="P:proteolysis involved in protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01913">
        <property type="entry name" value="protease_HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00248">
        <property type="entry name" value="HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022281">
        <property type="entry name" value="ATP-dep_Prtase_HsIV_su"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001353">
        <property type="entry name" value="Proteasome_sua/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023333">
        <property type="entry name" value="Proteasome_suB-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32194">
        <property type="entry name" value="PTHR32194"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00227">
        <property type="entry name" value="Proteasome"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF039093">
        <property type="entry name" value="HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03692">
        <property type="entry name" value="ATP_dep_HslV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51476">
        <property type="entry name" value="PROTEASOME_BETA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0021">Allosteric enzyme</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 7" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3 7" id="KW-0645">Protease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 7" id="KW-0915">Sodium</keyword>
    <keyword evidence="4 7" id="KW-0888">Threonine protease</keyword>
    <feature type="active site" evidence="7">
        <location>
            <position position="12"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="168"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="171"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>Na(+)</name>
            <dbReference type="ChEBI" id="CHEBI:29101"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022670"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022698"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023053"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00248"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="187" mass="19672" checksum="ADCA0802EE3A57AA" modified="2018-04-25" version="1">MDSDRFPGWHGTTILGVRKGGEVVVAGDGQVSLGQTVIKGTARKVRRLTPGGKPVLCGFAGSTADAFTLLERLEKKLEGAPGQLARACVELAKDWRTDKYLRNLEAMLIVTDGVDLFVLTGAGDVLEPENDVAAIGSGGNYALAAARALYDQPLDAETIARKAMAIAAEICVYTNGNLTVERITPGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE08</accession>
    <name>A0A2M9PE08_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000306">
        <property type="protein sequence ID" value="PJN95785.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="167"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="203"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="172"/>
            <end position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95785.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="235" mass="25190" checksum="A134924CED381A6F" modified="2018-04-25" version="1">MTEKSEEELARLDLIRRRMAPARPGHGPRIAGGILIAVLLVVGALWTFAPAQVRSLFGFGTSRPQDMQQPAAFTDGISTEVPRGESVDTAQLSTELPVAPPKAEGLTPEDQLRLDQMEARLRALADQPGGMTREELQAMLDENAAQLRAEITRQLLAQRSVTAGVDPTGAAAEAEARKRMEEERKRREAINKAQIASNGVVIDGVNGGETAAGGAGGRRLSENEGSAHRTDPDIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE15</accession>
    <name>A0A2M9PE15_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Aminotransferase</fullName>
            <ecNumber evidence="1">2.6.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06415</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>pyridoxal 5'-phosphate</name>
            <dbReference type="ChEBI" id="CHEBI:597326"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.6.1.-" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000303">
        <property type="protein sequence ID" value="PJN95795.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030170">
        <property type="term" value="F:pyridoxal phosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901605">
        <property type="term" value="P:alpha-amino acid metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004839">
        <property type="entry name" value="Aminotransferase_I/II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004838">
        <property type="entry name" value="NHTrfase_class1_PyrdxlP-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00155">
        <property type="entry name" value="Aminotran_1_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00105">
        <property type="entry name" value="AA_TRANSFER_CLASS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Aminotran_1_2" evidence="2">
        <location>
            <begin position="32"/>
            <end position="384"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU000481"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95795.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="410" mass="44836" checksum="B18B2750175E2305" modified="2018-04-25" version="1">MSEEFYRIKRLPPYVFAEVNRLKAKFRAEGMDIIDFGMGNPDMDTPRHIVDKLVETVQRPRTHRYSSSKGIPGLRRAQAGYYERRFGVKLDPETEVIATLGSKEGLANLAMAITAPGDVMLVPNPSYPIHPYGFMIAGGTLRHVPALHDGRFDPEQYIRALERAVIHSVPKPVAMVVSFPSNPTAQVCDLDFYKDLIAFAKKHHLWVLSDLAYAEIYFDGNPPPSILQAPGAKDVAVEFTSLSKTYAMPGWRMGFAVGNERLVSALTRIKSYLDYGAFTPVQVAAAAALNGPDDCIAEIRGIYKHRRDVLVDAMGRAGWTIPSPPATMFAWAPVPEAFAAVGSMGFSKILLSEAAVAVAPGVGFGEYGEGYVRLGLVENEHRIRQAARGVKKVMQNAGALLDRAMAEAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEF6</accession>
    <name>A0A2M9PEF6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH hxlR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05565</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000252">
        <property type="protein sequence ID" value="PJN95937.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="50"/>
            <end position="75"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95937.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8016" checksum="BA1062B083785038" modified="2018-04-25" version="1" fragment="single">QALEADGMVARRAFPVVPPHVEYSLTPLGAEAAERVRALVDWIEVSLPRIREAPPGEGPSREGPSGEGCVSRPDL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM0</accession>
    <name>A0A2M9PEM0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Uridylate kinase</fullName>
            <shortName evidence="6">UK</shortName>
            <ecNumber evidence="6">2.7.4.22</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Uridine monophosphate kinase</fullName>
            <shortName evidence="6">UMP kinase</shortName>
            <shortName evidence="6">UMPK</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">pyrH</name>
        <name evidence="8" type="ORF">CNY89_05320</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">Catalyzes the reversible phosphorylation of UMP to UDP.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>ATP + UMP = ADP + UDP</text>
            <dbReference type="Rhea" id="RHEA:24400"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
            <dbReference type="ChEBI" id="CHEBI:58223"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.4.22"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="6">Inhibited by UTP.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Pyrimidine metabolism; CTP biosynthesis via de novo pathway; UDP from UMP (UMPK route): step 1/1.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the UMP kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.4.22" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000241">
        <property type="protein sequence ID" value="PJN95973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00159">
        <property type="reaction ID" value="UER00275"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033862">
        <property type="term" value="F:UMP kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044210">
        <property type="term" value="P:'de novo' CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd04254">
        <property type="entry name" value="AAK_UMPK-PyrH-Ec"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1160.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01220_B">
        <property type="entry name" value="PyrH_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036393">
        <property type="entry name" value="AceGlu_kinase-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001048">
        <property type="entry name" value="Asp/Glu/Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011817">
        <property type="entry name" value="Uridylate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015963">
        <property type="entry name" value="Uridylate_kinase_bac"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00696">
        <property type="entry name" value="AA_kinase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005650">
        <property type="entry name" value="Uridylate_kin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53633">
        <property type="entry name" value="SSF53633"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02075">
        <property type="entry name" value="pyrH_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 6" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="5 6" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AA_kinase" evidence="7">
        <location>
            <begin position="18"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="23"/>
            <end position="26"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="65"/>
        </location>
        <ligand>
            <name>UMP</name>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="66"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="70"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="85"/>
        </location>
        <ligand>
            <name>UMP</name>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="146"/>
            <end position="153"/>
        </location>
        <ligand>
            <name>UMP</name>
            <dbReference type="ChEBI" id="CHEBI:57865"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="173"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="174"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="179"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <position position="182"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001018"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007614"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00696"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="27039" checksum="40AFF251D3AB505E" modified="2018-04-25" version="1">MTDGVETETSPQVPPAYKRILLKISGEALMGPGQFGLHPPTVERIASDIRALHGLGVEICMVIGGGNIFRGLQGSAQGMERTTADYMGMLATVMNALAMQSALEEMGVYTRVLSAIPMAQVCEPYIRRRAVRHLEKGRVVIFAAGTGNPYFTTDTAATLRASEMACEAIFKGTQVDGIYDSDPKKNPEARRFDRISYDTVLQKHLKVMDAAAIALARDNRLPIVVFALDAPNGLADVVRGQGRFTIVEPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEM5</accession>
    <name>A0A2M9PEM5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05155</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000230">
        <property type="protein sequence ID" value="PJN96001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="12"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="85"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="85"/>
            <end position="106"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="113"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="113" mass="13070" checksum="1EF2F8FD4D6CA37E" modified="2018-04-25" version="1" fragment="single">MENSSTNWIDYLISLSPVLQTAIWACVAILFAWVIKEPIRHLAERLVERVGQGDKIITPYFSIERQEQLNQLDYIQTVSRGEDASTIIRTENSEKSPTSSQEFEAYRQSIYDK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET1</accession>
    <name>A0A2M9PET1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Transpeptidase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04825</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000211">
        <property type="protein sequence ID" value="PJN96055.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008658">
        <property type="term" value="F:penicillin binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.710.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012338">
        <property type="entry name" value="Beta-lactam/transpept-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001460">
        <property type="entry name" value="PCN-bd_Tpept"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00905">
        <property type="entry name" value="Transpeptidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56601">
        <property type="entry name" value="SSF56601"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Transpeptidase" evidence="2">
        <location>
            <begin position="8"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00905"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96055.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="329" mass="34910" checksum="B2F538A0F8024C99" modified="2018-04-25" version="1">MHPISAPSSLPDFDPNLRPALPTSGDPADSPLFNRAAQGRYELGSTFKIFAVAQGLERGAITPKTLIDTKGPMKWGRFTIRDFHNYGPRLTVEEVIVKSSNIGAAHIAIGMGATAQQQFLRQLGLLDVLPVELSEVGRAAPLVPARWSDLTTMTISYGHGLAVSPLHLAVAYATVANGGLKVKPTLLASDVRPTEADRVISEAHSAQVRDMLRQVVVRGTAKRADVPGYEVGGKTGTADKPTASGGYARDKTIATFASVFPASDPRFVMVVALDEPTARINGSGFRTAGLTAAPVFAEALRRIAPIMGMRPDMNPDGEVPLLYTMAGGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU5</accession>
    <name>A0A2M9PEU5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_04665</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000203">
        <property type="protein sequence ID" value="PJN96080.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96080.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="30292" checksum="7606D6F7380D499B" modified="2018-04-25" version="1">MNQPPIKNAPQRLRQRWRAREKSWRIWWEPSTDLRELGFEVVELDPKRLTWSVREAERLNGLVDQRRSGVVAPAAARRGRTVLALIRDFETSPEFSDLKPASQRDYRQGFRQIEAKWGDSPVVDFTPPVIYQWYRALLRERSVFVAASLKRKLSILLSHAVILGWRSDNPALGVKSKTPPRRTRIGTWEELDSLTASARRLGLYSIALAILLAIYQGQRRTDIVQAQRAAFAEHTWLLRRSKRGNAGGFELHPEVLARISHQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF89</accession>
    <name>A0A2M9PF89_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 4">Protein GrpE</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">HSP-70 cofactor</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3 7" type="primary">grpE</name>
        <name evidence="7" type="ORF">CNY89_04060</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3 4">Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">Homodimer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3 5">Belongs to the GrpE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000173">
        <property type="protein sequence ID" value="PJN96182.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000774">
        <property type="term" value="F:adenyl-nucleotide exchange factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051087">
        <property type="term" value="F:chaperone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042803">
        <property type="term" value="F:protein homodimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006457">
        <property type="term" value="P:protein folding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00446">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.22.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01151">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000740">
        <property type="entry name" value="GrpE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013805">
        <property type="entry name" value="GrpE_coiled_coil"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009012">
        <property type="entry name" value="GrpE_head"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21237">
        <property type="entry name" value="PTHR21237"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01025">
        <property type="entry name" value="GrpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00773">
        <property type="entry name" value="GRPEPROTEIN"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51064">
        <property type="entry name" value="SSF51064"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF58014">
        <property type="entry name" value="SSF58014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01071">
        <property type="entry name" value="GRPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 3 4" id="KW-0143">Chaperone</keyword>
    <keyword evidence="6" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 4" id="KW-0346">Stress response</keyword>
    <feature type="coiled-coil region" evidence="6">
        <location>
            <begin position="15"/>
            <end position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009054"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU000639"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU004478"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96182.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="21446" checksum="019F9C4C845E2FF2" modified="2018-04-25" version="1">MAKERGPDDFDESFLDDIEAVAEDDLEEISDAEADADEAATLRVEVADLKDRLLRALADTENLRKRAERDRRDAETYGATRFARDLLPVFDNFSRALDSATDEARAAAPGLLEGIELTRRTLLQAFEKNKILPIDPQPGERFDPNLHQAMFEAPVPGTKAGEIIQVLGQGFTIGERLLRPAQVGVSSGGPAASRAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG2</accession>
    <name>A0A2M9PFG2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">4,5-dihydroxyphthalate decarboxylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000140">
        <property type="protein sequence ID" value="PJN96290.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015168">
        <property type="entry name" value="SsuA/THI5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09084">
        <property type="entry name" value="NMT1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NMT1" evidence="1">
        <location>
            <begin position="61"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF09084"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96290.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="331" mass="37072" checksum="449618B007C1609F" modified="2018-04-25" version="1">MTRGLSLSIAVGDYDRNRPLLDGRVAIDGVDPVVMRLNPEEMFFRAMRHEEFDICELSLSSHTLRTARGDAPYVGVPAFVSRAFRHTGIIVRNDSGITHPSQLKGRRVGIPEWQLTANVWIRAILEDEYGVAPQDISWVRGGLEQAGRVEKVRIALPAGVEIEDIGPEDTLRDMLADGRIDAFMGPRAPTSFTPSNPGLRWLFADPTAEAMAYFERRRIFPIMHVIGVRRSLAEAHPWLPMAVLKAFSRSKAIALDHLADTSASKITLPFVEEQLRRAVGLMGPDFWPHGLGPNRHVLEYFTEAHHKQGLSDRKVSVEELFHPATLESYVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK6</accession>
    <name>A0A2M9PFK6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">50S ribosomal protein L16</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">rplP</name>
        <name evidence="9" type="ORF">CNY89_03285</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the universal ribosomal protein uL16 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000133">
        <property type="protein sequence ID" value="PJN96309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1170.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016180">
        <property type="entry name" value="Ribosomal_L10e/L16"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036920">
        <property type="entry name" value="Ribosomal_L10e/L16_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000114">
        <property type="entry name" value="Ribosomal_L16"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00252">
        <property type="entry name" value="Ribosomal_L16"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00060">
        <property type="entry name" value="RIBOSOMALL16"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54686">
        <property type="entry name" value="SSF54686"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 9" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="2" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="3" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="2" id="KW-0820">tRNA-binding</keyword>
    <feature type="domain" description="Ribosomal_L16" evidence="8">
        <location>
            <begin position="4"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="7">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="51"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00252"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5762" checksum="6D91D75AF696ADD7" modified="2018-04-25" version="1" fragment="single">MLSPKRTKFRKMHKGRIHGEAKGGSDLNFGHFGLKATEPERITARQIEAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN7</accession>
    <name>A0A2M9PFN7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000127">
        <property type="protein sequence ID" value="PJN96332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7278" checksum="A2C248B7FACD02F8" modified="2018-04-25" version="1">MSPELEAHLAAAQAAAYRIQTLLDSVSALEDIVDPDVRDASRALSMIARQQARALNLSLDSSALAKVAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFR4</accession>
    <name>A0A2M9PFR4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Ribosomal silencing factor RsfS</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2 3" type="primary">rsfS</name>
        <name evidence="3" type="ORF">CNY89_02870</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2">Interacts with ribosomal protein L14 (rplN).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the Iojap/RsfS family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000112">
        <property type="protein sequence ID" value="PJN96381.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042256">
        <property type="term" value="P:mature ribosome assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0090071">
        <property type="term" value="P:negative regulation of ribosome biogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0017148">
        <property type="term" value="P:negative regulation of translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01477">
        <property type="entry name" value="Iojap_RsfS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004394">
        <property type="entry name" value="Iojap/RsfS/C7orf30"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21043">
        <property type="entry name" value="PTHR21043"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00090">
        <property type="entry name" value="rsfS_iojap_ybeB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0678">Repressor</keyword>
    <keyword evidence="2" id="KW-0810">Translation regulation</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010574"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01477"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96381.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="16156" checksum="E60198366E56F7F8" modified="2018-04-25" version="1">MEEAHLTQHLPAATAADAPQAAFARHKGQIDSVPALLATILASLEDDKAEDIVSIPLAGKSEMADHIVICSGRSSRQVAAISEKLADRLKEEWRIIARMEGKELGDWVLIDAGDVIVHVFRPEVRDFYQLEKMWAPETPRPRPAGAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV4</accession>
    <name>A0A2M9PFV4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 12">Cytochrome c oxidase assembly protein CtaG</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">ctaG</name>
        <name evidence="16" type="ORF">CNY89_02775</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 12">Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3 12">Cell inner membrane</location>
            <topology evidence="3 12">Single-pass type II membrane protein</topology>
            <orientation evidence="3 12">Periplasmic side</orientation>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4 12">Belongs to the COX11/CtaG family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the cytochrome c oxidase subunit 3 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000108">
        <property type="protein sequence ID" value="PJN96399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004129">
        <property type="term" value="F:cytochrome-c oxidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008535">
        <property type="term" value="P:respiratory chain complex IV assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd01665">
        <property type="entry name" value="Cyt_c_Oxidase_III"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.80">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.370.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00155">
        <property type="entry name" value="CtaG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023471">
        <property type="entry name" value="CtaG/Cox11_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024791">
        <property type="entry name" value="Cyt_c/ubiquinol_Oxase_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033945">
        <property type="entry name" value="Cyt_c_oxase_su3_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000298">
        <property type="entry name" value="Cyt_c_oxidase-like_su3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007533">
        <property type="entry name" value="Cyt_c_oxidase_assmbl_CtaG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035973">
        <property type="entry name" value="Cyt_c_oxidase_su3-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013833">
        <property type="entry name" value="Cyt_c_oxidase_su3_a-hlx"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11403">
        <property type="entry name" value="PTHR11403"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00510">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04442">
        <property type="entry name" value="CtaG_Cox11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110111">
        <property type="entry name" value="SSF110111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81452">
        <property type="entry name" value="SSF81452"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50253">
        <property type="entry name" value="COX3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="12" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="12" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="10 12" id="KW-0186">Copper</keyword>
    <keyword evidence="11 12 14" id="KW-0472">Membrane</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8 12" id="KW-0735">Signal-anchor</keyword>
    <keyword evidence="7 12 14" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12 14" id="KW-1133">Transmembrane helix</keyword>
    <feature type="topological domain" description="Cytoplasmic" evidence="12">
        <location>
            <begin position="1"/>
            <end position="6"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="topological domain" description="Periplasmic" evidence="12">
        <location>
            <begin position="29"/>
            <end position="481"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="228"/>
            <end position="248"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="254"/>
            <end position="272"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="293"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="339"/>
            <end position="360"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="372"/>
            <end position="392"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="412"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="14">
        <location>
            <begin position="453"/>
            <end position="473"/>
        </location>
    </feature>
    <feature type="domain" description="COX3" evidence="15">
        <location>
            <begin position="217"/>
            <end position="474"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="13">
        <location>
            <begin position="175"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="13">
        <location>
            <begin position="189"/>
            <end position="203"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00009620"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00010581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00015384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00155"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50253"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN96399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="481" mass="53877" checksum="54234CD3B6490863" modified="2018-04-25" version="1">MALPTGNTRHALGLALVAVGMVGLSFAAVPFYDWFCRTTGYGGTTTRAEAPSGPVGEELLTIRFDANVQPGMPVGFRPVERTMRLRIGETGLAFYEFENLSDERIAGTASFNVTPFSAGSYFDKIACFCFELQELAPGEKVQMPVTFFVDPEMLRDAEAKGVRNITLSYTMYPADPSPEREASAARRPPLRRRPCRRRRMPTRRSRTEREAEMAGRVNHDYHILPPSIWPFTGAVGAFVMLLGAVLFFHDSGPWVMLMGLMLVLYTMYSWWADVISESQAGDHTPVVQIGLRYGVIMFIISEIMFFAAWFWSFFKNALYPMAAIDHTWPPPGIETFDPWHLPLINTLILLCSGCAATWAHHALVHENDRRQVKWGLSLAIGLGVFFTLVQIYEYSHATFGFSGNVYGANFFMATGFHGFHVIIGTIFLGVCLIRLQAGQFTQDKHVGFEAAAWYWHFVDVVWLFLFAAIYIWGSGGGAGHH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV6</accession>
    <name>A0A2M9PFV6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000099">
        <property type="protein sequence ID" value="PJN96435.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="15"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014922514" evidence="1">
        <location>
            <begin position="16"/>
            <end position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96435.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9284" checksum="364B89F68DA20F99" modified="2018-04-25" version="1">MLSLAAALLFAPALASTEEAWETFRTQVQDACLALAEPGSRVEVSPFGSESYGGALVVTKTAEGEERSICIWSKATGAAELTAPLPPED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFV9</accession>
    <name>A0A2M9PFV9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 4">Orotate phosphoribosyltransferase</fullName>
            <shortName evidence="4">OPRT</shortName>
            <shortName evidence="4">OPRTase</shortName>
            <ecNumber evidence="2 4">2.4.2.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="primary">pyrE</name>
        <name evidence="6" type="ORF">CNY89_02550</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>diphosphate + orotidine 5'-phosphate = 5-phospho-alpha-D-ribose 1-diphosphate + orotate</text>
            <dbReference type="Rhea" id="RHEA:10380"/>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57538"/>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <dbReference type="EC" id="2.4.2.10"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="1 4">Pyrimidine metabolism; UMP biosynthesis via de novo pathway; UMP from orotate: step 1/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homodimer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.4.2.10" evidence="2 4"/>
    <dbReference type="EMBL" id="PHNO01000098">
        <property type="protein sequence ID" value="PJN96440.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00070">
        <property type="reaction ID" value="UER00119"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004588">
        <property type="term" value="F:orotate phosphoribosyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044205">
        <property type="term" value="P:'de novo' UMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd06223">
        <property type="entry name" value="PRTases_typeI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.2020">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01208">
        <property type="entry name" value="PyrE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023031">
        <property type="entry name" value="OPRT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000836">
        <property type="entry name" value="PRibTrfase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029057">
        <property type="entry name" value="PRTase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00156">
        <property type="entry name" value="Pribosyltran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53271">
        <property type="entry name" value="SSF53271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6" id="KW-0328">Glycosyltransferase</keyword>
    <keyword evidence="4" id="KW-0460">Magnesium</keyword>
    <keyword evidence="3 4" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Pribosyltran" evidence="5">
        <location>
            <begin position="75"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="region of interest" description="5-phosphoribose 1-diphosphate binding" evidence="4">
        <location>
            <begin position="133"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="107"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="108"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="111"/>
        </location>
        <ligand>
            <name>5-phospho-alpha-D-ribose 1-diphosphate</name>
            <dbReference type="ChEBI" id="CHEBI:58017"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="4">
        <location>
            <position position="137"/>
        </location>
        <ligand>
            <name>orotate</name>
            <dbReference type="ChEBI" id="CHEBI:30839"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00156"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96440.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="24993" checksum="8ABB9476EDE7B41C" modified="2018-04-25" version="1">MTAATLLPDAEMARLTARMLLEIGAVHFRRDEPYIFTSGLASPVYTDCRKIISYPRVRSALMDFSVAKVLRRAGYESFDAVAGGETAGIPFAAWMAERMGLPMLYVRKKPKGFGRDAQIEGDMAEGARVLLVEDLTTDGGSKIRFAEAVRAAGGEVAHTSVVFFYGIFPRSEAVLAEHGLTLHYLATWRDVLAEAKASARFDSATLAEVESFLDAPLAWSAAHGGIDEVAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX0</accession>
    <name>A0A2M9PFX0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">YjbH domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02535</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000097">
        <property type="protein sequence ID" value="PJN96443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010344">
        <property type="entry name" value="YbjH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06082">
        <property type="entry name" value="YjbH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014806049" evidence="1">
        <location>
            <begin position="30"/>
            <end position="728"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="728" mass="80146" checksum="D93E2C66F3DA76BB" modified="2018-04-25" version="1">MAGRRGGASVPTLILASVSAIAISAPALAETVRPSLNLYGMTGLIDMPSAQDQPDAQISLSYSYFGSTQRRNFSFQILPRISGAIRYSTIDNWGQNDEDTGVYNPNYDLFDRSFDVQFTLLREGEWRSWTPAIALGFRDFLGTGVYSSEYLVATKTIQDFTVTAGLGWGRLSRTNTIGNPFCEVANSFCDRDNDFGEGGKLSADTFFHGQNVGVFGGVEWRTPIEGLSLKVEYSTDDYKREQKSPSSDFEVNSQVNVGAEYRIRPGIIVGGYYMYGSSVGFNIALSGNPLRPLVPPDFGTGPLPVNPRAANAPMGTNWASNPQSIDQLASALAEILNAEGMRLEGFHAQPGGRTVEVAITNNRFQSDPKAFGRTARVLAAGLPASVETFRITAVQDGLRTTTVTINRTDFENEIARPNAGQESWDTLEISGATPHMPDNAWRREAYPDFSWSLVPAPFLTLLTPGDPIRIGLNIDLDTNTYLAPGLFVTANVSQPALNIPDDPGPSETALPPVRSDSPRYYSGYAPKIPELSLNYLFKLNENTYARLSGGLLERMYGGVGGEILWKPVDQSWGVGADINWVAQRDYDDPFGFDYYDYNVVTGHASLYWDTGYYGLEAQIDAGRYLAGDWGSTFTLTRRFPNGWAVGAYFTLTDVTEDDFGEGSFDKGVSLEIPFRWTVPFETRANNTIALTSVSRDGGAQLTQSNALYPIIRNYDRNRLERNWGSFWQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG24</accession>
    <name>A0A2M9PG24_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02220</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000082">
        <property type="protein sequence ID" value="PJN96493.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014644191" evidence="1">
        <location>
            <begin position="32"/>
            <end position="356"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_4" evidence="2">
        <location>
            <begin position="37"/>
            <end position="300"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96493.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="356" mass="36389" checksum="8D7189AA06549F48" modified="2018-04-25" version="1">MTSLTKTRLSGGLAGAATLAAALLGGGAAFAQASGMVAFLMPDQGSTRYEEHDFPGFKAAMAKLCPDCEVVYQNATADVALQQQQFNSVITQGAKVVVLDPVDSNAAASLVNLAQSQGVKVIAYDRPIPGTPADYYVSFDNKGIGQAIAESLVAHLKAEGVPADKGGVLQINGSPTDAAAGLIRDGIHAGLESSGYKTLAEYDTPDWAPPKAQEWTSGQITRFGADIVGVVAANDGTGGGAIAAFKAAGVDPVPPVTGNDATLAALQLIIAGDQYNTISKPSEIVAAAAAEVAVQLLNGQTPEAKTTLYDTPSQLFVPAVVTRENLKAEIIDKGIATAAQLCEGRYAAGCEDLGIQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC9</accession>
    <name>A0A2M9PGC9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Enoyl-[acyl-carrier-protein] reductase [NADH]</fullName>
            <ecNumber evidence="7">1.3.1.9</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_01590</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>a 2,3-saturated acyl-[ACP] + NAD(+) = a (2E)-enoyl-[ACP] + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:10240"/>
            <dbReference type="Rhea" id="RHEA-COMP:9925"/>
            <dbReference type="Rhea" id="RHEA-COMP:9926"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:78784"/>
            <dbReference type="ChEBI" id="CHEBI:78785"/>
            <dbReference type="EC" id="1.3.1.9"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Lipid metabolism; fatty acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 7">Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.3.1.9" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000057">
        <property type="protein sequence ID" value="PJN96603.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00094"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004318">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase (NADH) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016631">
        <property type="term" value="F:enoyl-[acyl-carrier-protein] reductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd05372">
        <property type="entry name" value="ENR_SDR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014358">
        <property type="entry name" value="Enoyl-ACP_Rdtase_NADH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43159">
        <property type="entry name" value="PTHR43159"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000094">
        <property type="entry name" value="Enoyl-ACP_rdct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0275">Fatty acid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0276">Fatty acid metabolism</keyword>
    <keyword evidence="7" id="KW-0444">Lipid biosynthesis</keyword>
    <keyword evidence="6 7" id="KW-0443">Lipid metabolism</keyword>
    <keyword evidence="5 7 9" id="KW-0520">NAD</keyword>
    <keyword evidence="4 7" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="8">
        <location>
            <position position="155"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="12"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="18"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="39"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="63"/>
            <end position="64"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="91"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="162"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="191"/>
            <end position="195"/>
        </location>
        <ligand>
            <name>NAD(+)</name>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023027"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023160"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRNR" id="PIRNR000094"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRSR" id="PIRSR000094-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96603.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="271" mass="28727" checksum="DCE343C8966CF9DB" modified="2018-04-25" version="1">MLMSGKRGLILGVANDKSIAWAIAQACHAEGAELAFTYQGDALGKRVAPLAASVGSQIVLPCDVTDAASMDAVFATLAEKWGRLDFLVHAIGFSDKAELRGKYVEATTAANFSQTMLISVFSFTDAVRRAAPLMTEGGSCLTLTYYGAEKVMPHYNVMGVAKAALEASVKYMAMDLGPDDIRVNALSAGPIKTLAASGIGDFRYIMKWNELNAPLRRNVTQGDVGKSALFLLSDLSSGVTGENLHVDAGYHVVGMKAEDAPDIDVVSGRKE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD6</accession>
    <name>A0A2M9PGD6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Potassium transporter TrkH</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_01530</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000055">
        <property type="protein sequence ID" value="PJN96610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008324">
        <property type="term" value="F:cation transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006813">
        <property type="term" value="P:potassium ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003445">
        <property type="entry name" value="Cat_transpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02386">
        <property type="entry name" value="TrkH"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-0406">Ion transport</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="71"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="133"/>
            <end position="153"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="190"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="277"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="308"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="351"/>
            <end position="372"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="411"/>
            <end position="434"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="470"/>
            <end position="493"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023065"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="499" mass="53050" checksum="BEEF8F3782A7F76B" modified="2018-04-25" version="1">MAILRQFPALAILTLIASGLMIIPALHAARAGHLEITQVFLVHGALFAVLGALVGLALANRRPRHAARYHLTTILLTYLVLPVMLATPLAALAPGLGIGRAYFEMLSSLTTTGATVIKAPNLLPESLHLWRALIGWVGGFMVLVATFSVLAPLNLGGFEIREREDLRLTSRRGGTIEEASARGLRICRSIGPIYAVFTGILSLLLIAAGDRPFVAVCHAMATISTSGVSPVGGLEGGTSGRLGEMAIGLFLLAAISHRSLTFTLRRGERPRLNDPEVRLMLISVLGITLLLFLRSFAGAAEIARQDNLLAAVRAIWGSLFTVLSFLTTTGFESRDWTTMRLWSDLPDPGTILLGVAAMGGGVATTAGGIKLLRLYALYRQGQRELDLLIHPSSVWPHGQGEFAITARGARIAFVFLMLFLSSVAMAMIALTLAGLTFEQALALAIAAMTTTGPAIRTLGGGLAYADLSDAALAILGATMIVGRIEPLVLIALFNPAWWR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF4</accession>
    <name>A0A2M9PGF4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01555</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000056">
        <property type="protein sequence ID" value="PJN96606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="6"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="38"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="94"/>
            <end position="117"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="137"/>
            <end position="159"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="180"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="269"/>
            <end position="287"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="307" mass="31860" checksum="5A89400A289B976C" modified="2018-04-25" version="1">MSGFVLVSILMSVVGVSTPILIAALGELVVEKSGVLNLGVEGMMLIGAVTGFAVTYVTGSPWIGVLAAALAAMIAALMFGYLTLSLTSNQVATGLALTIFGISLSSLIGNGFVGLTVPAFGAVFPPALAQDPMLRAVFGYSPIVYFSFVMTAAVWWFLLRSRAGLILRAVGENDHSAHSIGYDVIAVRYAAVAFGGAMAGIAGTYYSLVLTPMWAEQLTAGRGWIALALVVFSVWKPLRLLAGAYLFGLVMTIELQSKAAGVALVPPEFLASLPYIATIVVLALISLRKSGATAAPACLGHPFKPSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG3</accession>
    <name>A0A2M9PGG3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Glutamate--cysteine ligase</fullName>
            <ecNumber evidence="1">6.3.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_01485</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2">
            <text>ATP + L-cysteine + L-glutamate = ADP + gamma-L-glutamyl-L-cysteine + H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:13285"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:35235"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58173"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.2"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.2" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000053">
        <property type="protein sequence ID" value="PJN96616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004357">
        <property type="term" value="F:glutamate-cysteine ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006750">
        <property type="term" value="P:glutathione biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035434">
        <property type="entry name" value="GCL_bact_plant"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006336">
        <property type="entry name" value="GCS2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014746">
        <property type="entry name" value="Gln_synth/guanido_kin_cat_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011556">
        <property type="entry name" value="Glut_cys_lig_pln_type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34378">
        <property type="entry name" value="PTHR34378"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34378:SF1">
        <property type="entry name" value="PTHR34378:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04107">
        <property type="entry name" value="GCS2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF017901">
        <property type="entry name" value="GCL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55931">
        <property type="entry name" value="SSF55931"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01436">
        <property type="entry name" value="glu_cys_lig_pln"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1015">Disulfide bond</keyword>
    <keyword evidence="5" id="KW-0436">Ligase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="1"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="disulfide bond" evidence="3">
        <location>
            <begin position="129"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="391"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00012220"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00029283"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PIRSR" id="PIRSR017901-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="391" mass="43269" checksum="7B1C15F364CBC075" modified="2018-04-25" version="1" fragment="single">MSSSTPARSSRPTSCRAAPRSQSGGGPIERQEQLAEYLASGCKPEADWRIGTEHEKFGYDLANHLPLPYEGPCSIRAMLEGLRDRYGWAEVREAGALIGLVKDGANVSLEPGGQLELSGAPLETIHQTCDEANAHLREVRSIADEIGAGFMGLGAAPEWTEGQMPVMPKGRYGLMTSYMPRVGTTGTMMMYRTCTIQVNLDFASEADMVAKFRTSLALQPVATALFAASPFFDGAVNGWKSWRARIWRDLDPARTGMLPFVFEEGMGFERYVDYALDVPMYFVYRDGVYIDALGMSFRDFLAGKLPALPGEKPTFSDWADHLTTIFPEVRLKKFMEMRGADGGPWRKICALPAFWVGLLYDAPSLAAAWDLCKDWTAEERDTLRHDAARFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGL4</accession>
    <name>A0A2M9PGL4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01125</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000039">
        <property type="protein sequence ID" value="PJN96672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0732">Signal</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857799" description="Probable membrane transporter protein" evidence="6">
        <location>
            <begin position="18"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="74"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="103"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="141"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="178"/>
            <end position="196"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="223"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="230"/>
            <end position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="25646" checksum="EBE5B93248FE5386" modified="2018-04-25" version="1">MTLVTALLLFLSGFAAGAINAVAGGGTFITFAALSLAGVPPISANATSSITQFPGYVTSTLAYRKDFARFLRPALGLALLSSVGALGGALLLLALDDDGFRRLVPWLLIAATALFAAGPWLKPKHRPDSVPLLGPVPGAIVQFATAVYGGFFGAGMGVMMLATLGLTEAGDYHRLNALKNLLSIVIAAVAILVFVSGGLVTWPAALVMIPGVAVGGYAGVYIARRLPQPVLRGFVIVVGLALSAYYFAKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM8</accession>
    <name>A0A2M9PGM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01460</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000051">
        <property type="protein sequence ID" value="PJN96624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015112">
        <property type="term" value="F:nitrate transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015113">
        <property type="term" value="F:nitrite transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd17341">
        <property type="entry name" value="MFS_NRT2_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044772">
        <property type="entry name" value="NO3_transporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004737">
        <property type="entry name" value="NO3_transporter_NarK/NarU-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR23515">
        <property type="entry name" value="PTHR23515"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00886">
        <property type="entry name" value="2A0108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="133"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="169"/>
            <end position="187"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="199"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="225"/>
            <end position="247"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="268"/>
            <end position="292"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="312"/>
            <end position="330"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="351"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="386"/>
            <end position="403"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="415"/>
            <end position="436"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="442"/>
            <end position="472"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="493"/>
            <end position="514"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="526"/>
            <end position="550"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008432"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="575" mass="61751" checksum="FFEFF4B25F1F1028" modified="2018-04-25" version="1" fragment="single">MSLGKAAVFKHIPVYYPENVGAVGGLVGLVGGLGGFVLPIVFGALLDLTGVWTSCFAFLFLIVGVALVWMHVTIRRMEMAARGPALDELPGLPEFQDIHEPARHRMPRVIEDWRPEDPAFWEATGRKVARRNLWISIPALLLAFSVWMVWSVVVARLPAIGFAFTPEQLFWLAALPALSGATLRIFYGFMVPIFGGRLWTTLSTASLLIPALGIGYAVQNPQTPYLIFLTLALLCGLGGANFASSMANISFFFPKAEKGNALALNAGLGNLGVSVMQFLVPLVITGGVFGALGGAPQELGDGGRLWMQNAGFIWVPFILASSLAAAFGMNDIADAKASFAAQAVIFKRKHNWLMCILYIGTFGSFIGYSAGFPLLTKMEFPSVNSLQFVFLGPLVGALSRAGTGWVADKYGGARVTFWVFVGMIAAVLGVIFFLGIKDQPGAFWGFFACFMALFFFTGVGNSSTFQMIPVIMGREVPRLMPKLGAEERGRQTAMESAAIIAFTSAIGAYGGFFIPKAYGTSIAMTGAPVGALWVFLGFYVLCLALTFLVYNRPGGLLHDIEHRRASAALSPAPAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN1</accession>
    <name>A0A2M9PGN1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">HK97 family phage prohead protease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000038">
        <property type="protein sequence ID" value="PJN96682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006433">
        <property type="entry name" value="Prohead_protease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04586">
        <property type="entry name" value="Peptidase_S78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01543">
        <property type="entry name" value="proheadase_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0645">Protease</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-1188">Viral release from host cell</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022612"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="166" mass="17829" checksum="808817EC387B8DEC" modified="2018-04-25" version="1">MDRFLIEAKFDAGDDGAIEGKAWDFTTPDRIGDMIEPAAFRKAAFPLPMLFGHDQNDPVGIWTEASEAKGGFMMKGRLLIEDLGRAREVRALVKAGAVKGLSIGFTTKKAVARTGGGRTIKDLELHEVSLVTLPMHPGARVTSAKSAVEALRLVAAINRATAQLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN3</accession>
    <name>A0A2M9PGN3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Sugar ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01395</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000048">
        <property type="protein sequence ID" value="PJN96634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025997">
        <property type="entry name" value="SBP_2_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13407">
        <property type="entry name" value="Peripla_BP_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_4" evidence="1">
        <location>
            <begin position="1"/>
            <end position="254"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13407"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="297" mass="30521" checksum="93E7E6AEFAED2464" modified="2018-04-25" version="1">MKEGAEAAAAEHGITLKSYAGRIDGDSESQVQAIETCIADGAKGILITPSDTSGIVPAVKQARDAGLVVIALDTALEPASAANATFATDNFRAGELVGQWAAKSLGDGAADARIAFLNLNPSQPSVDVQRNQGFMTGFGIDVKDANVIGDEDDARIVGHDVTNGNEEGGRTAMENLLQKDPMINVVYTINEPAAAGAFEALKSVGRDQDVLIVSVDGGCPGVANIKAGAIGATSQQYPLQMAALGIKAIADFAASGEMPKPTEGKDFFDTGVTLITDKPVEGLESIDSAKGAELCWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS3</accession>
    <name>A0A2M9PGS3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00810</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the glycosyl hydrolase 12 (cellulase H) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000026">
        <property type="protein sequence ID" value="PJN96731.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008810">
        <property type="term" value="F:cellulase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000272">
        <property type="term" value="P:polysaccharide catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013319">
        <property type="entry name" value="GH11/12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002594">
        <property type="entry name" value="GH12"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34002">
        <property type="entry name" value="PTHR34002"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01670">
        <property type="entry name" value="Glyco_hydro_12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="2" id="KW-0326">Glycosidase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0624">Polysaccharide degradation</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU361163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96731.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="786" mass="80597" checksum="EFA24194299AB40F" modified="2018-04-25" version="1">MAYLDANGVLLPTSRVASSWIGGGGALYGNSGDNGFYGSGDDTLTGGLGDDTYMVWVPSTTIVEAANGGVDTLDSRVWGEAILPEHVENLLLNGPGTTAGTGNGLRNLIVAGNVGATLDGLAGDDVLVSGAGADIMRVQAGNGSDAIVGFVPGSDVIQLVGYGISTFDQLAQIAAQQGSDLVFTFSNDEKLVLRDVVLSDLDGYDFGLDQPLPPLPAGHQSLFGPGQAYSAFGWYVLNNVWNPGPLVYGVDYTVSSSYDPTDLTAGVTFHWAFPLTTNAFPTIIAYPEVIFGPAPMSGGHKVTDTAGVFPLQVSEIVDLTADYAVAIEGNTDGFNVAFDIWLTDVPNGGPSSVTNEVMVWVHKGGVTPYGQLAGTYDDGPVSAEIYVSDSGDWTYTAVVLDEDRLVGEISVSGVLARLQALGIVSSSEYLASLELGSEIVSGAGSLTIEDLTLNATLEDRTIEVTGAGTTTHLFPEDPPDLSGDDRVLYDPTQSLIEGGEGSDTLVLNVGATVRLDRFTTSQVDGPAYVTGFENVDASAANAGVTLYGSPYANVLVGGAYTDTLSGGDGADVLRGGGGGDIIDGGAGADQIQGGDGNDRITYDAADYSIDAGAGSDTLVLTVGATVRLDRFSTSQVDGGAYVTGFEKVDAAAASAAVNLTGSAYANTLTGGSKRDVLTGGAGADQFVFKTAPKASAADTITDFSVGEDRIHLDASFFRGLPTGALASGALEFGTTAAASDDRILYDSASGSLYFDRDGSADDYSAILFATIGPGKAVSAQDFWVIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGU6</accession>
    <name>A0A2M9PGU6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_00735</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000023">
        <property type="protein sequence ID" value="PJN96742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015006662" evidence="4">
        <location>
            <begin position="31"/>
            <end position="211"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="211"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="211" mass="23459" checksum="593C913B77F4F9E2" modified="2018-04-25" version="1" fragment="single">MTLHFRGAGPVARRALLAAGISAFALAAHAQDQAAIEKWVDGEFQPSTLTRDQQIAEMEWFAKAAEPFKGMTINVVSENIPTHTYESQTLTKAFEGITGIKVTHDLLQEGDVIEKLQTQVQSGQNVYDAYVNDSDLIGTHFRYGWAVPLSDYMAGEGADVTSPTLDLDDFMGKSFTTAPDGKLYMLPDQQFANLYWFRHDLFSDPALKEQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW2</accession>
    <name>A0A2M9PGW2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 5">30S ribosomal protein S13</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpsM</name>
        <name evidence="8" type="ORF">CNY89_00525</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 30S ribosomal subunit. Forms a loose heterodimer with protein S19. Forms two bridges to the 50S subunit in the 70S ribosome.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS13 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000015">
        <property type="protein sequence ID" value="PJN96788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.910.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01315">
        <property type="entry name" value="Ribosomal_S13_S18"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027437">
        <property type="entry name" value="30s_Rbsml_prot_S13_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001892">
        <property type="entry name" value="Ribosomal_S13"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010979">
        <property type="entry name" value="Ribosomal_S13-like_H2TH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019980">
        <property type="entry name" value="Ribosomal_S13_bac-type"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018269">
        <property type="entry name" value="Ribosomal_S13_CS"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10871:SF1">
        <property type="entry name" value="PTHR10871:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00416">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002134">
        <property type="entry name" value="Ribosomal_S13"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46946">
        <property type="entry name" value="SSF46946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03631">
        <property type="entry name" value="uS13_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00646">
        <property type="entry name" value="RIBOSOMAL_S13_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50159">
        <property type="entry name" value="RIBOSOMAL_S13_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="2 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <keyword evidence="5" id="KW-0820">tRNA-binding</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="98"/>
            <end position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008080"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003830"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13649" checksum="63E3CE4B55AD73B0" modified="2018-04-25" version="1">MARIAGVNIPTNKRVAIALTYIHGIGRTTAEELCGSLGIDESRRVNDLTDAEVLRIREYIDANVKVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4C3</accession>
    <name>A0A2M9P4C3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Helicase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_30280</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004742">
        <property type="protein sequence ID" value="PJN92375.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041657">
        <property type="entry name" value="HTH_17"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12728">
        <property type="entry name" value="HTH_17"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0347">Helicase</keyword>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_17" evidence="1">
        <location>
            <begin position="3"/>
            <end position="36"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12728"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92375.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="8141" checksum="2A3427A6717AC162" modified="2018-04-25" version="1" fragment="single">TVLYGMAREGTIPARKVGKKWTFEKAGLDAWMRGHRPVQSFFTDIEFKIEGNDELRDPQREGYLRTYEF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F3</accession>
    <name>A0A2M9P4F3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30005</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004644">
        <property type="protein sequence ID" value="PJN92405.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92405.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3586" checksum="A77F3B3FA59D2FB5" modified="2018-04-25" version="1" fragment="single">TAAETCGMDRQTLRDWVHRNAEGLAGLSNQRGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4G5</accession>
    <name>A0A2M9P4G5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29875</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004597">
        <property type="protein sequence ID" value="PJN92420.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92420.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8430" checksum="192F92467F73508D" modified="2018-04-25" version="1" fragment="single">TLTDADRNFEKLCKVAGLDAQKLQELLGAKEQETRNQLANRASAVVTSEIRRLWKDRQLKIRFNLDAEHTDTF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Y8</accession>
    <name>A0A2M9P4Y8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28420</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004063">
        <property type="protein sequence ID" value="PJN92585.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92585.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6924" checksum="034B8C878431E134" modified="2018-04-25" version="1" fragment="single">TYDWASSDFFREIDEEFLSERDNEVQTGLPHAPPIHISGRTAICWNRADHIFQFWVSAI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A1</accession>
    <name>A0A2M9P5A1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">SLC13 family permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_27120</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003640">
        <property type="protein sequence ID" value="PJN92734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="25"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="32"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7098" checksum="139EF8243A1797EA" modified="2018-04-25" version="1" fragment="single">ALGLMPAAAAGLIATCAILLLKILSVEEMYRAINWTTVILIGALMPLSTAISQSGAAQLMADGLVARWG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5A3</accession>
    <name>A0A2M9P5A3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_27270</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003686">
        <property type="protein sequence ID" value="PJN92717.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92717.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10699" checksum="87AD5744CCC4303C" modified="2018-04-25" version="1" fragment="single">ELGMQPGNAAVDAVRVLKLPFYPRWILCDLQFAAGADARKGEAILCLYGPDGCTPIDGRSERVRGHNDRHGVSLETEERRTAYLEFFCTAVFGEEGP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G3</accession>
    <name>A0A2M9P5G3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26500</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003453">
        <property type="protein sequence ID" value="PJN92794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10209" checksum="8A61BC4F7FFDD99B" modified="2018-04-25" version="1" fragment="single">MVRAVLFLAFGLVLLGVLPNPFTTLVPPAARSFLSDFYGPWVEAWTLAGVGPALAPYQPLMGWAFVALGALHLRRPLFAGLSWPIRHAYWFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5I9</accession>
    <name>A0A2M9P5I9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003463">
        <property type="protein sequence ID" value="PJN92790.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013783">
        <property type="entry name" value="Ig-like_fold"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92790.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="10690" checksum="3E4A6C85D701D11D" modified="2018-04-25" version="1" fragment="single">PPFDFAWSGEKAGQHELRIEATDKAGVVASVSRVVTVAENLPPESTLTAPADGAHFKVGAAIRAEATASDPEGKIARVDFYATPMTTFSDPVLVGSDSSAPYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P8</accession>
    <name>A0A2M9P5P8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_26000</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003288">
        <property type="protein sequence ID" value="PJN92845.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006626">
        <property type="entry name" value="PbH1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00710">
        <property type="entry name" value="PbH1"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="1">
        <location>
            <begin position="14"/>
            <end position="99"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92845.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12367" checksum="5BFD2DF73E151BB9" modified="2018-04-25" version="1" fragment="single">VSNIEMLNFKVAMNFWNSSGVTIEDNVIRKMNHDALFIGGGKNLVIEDNYIGDYNPQYPLALHKDGIQVFTDSVTGPLENVVIRGNTFESGDVRHGVFIFNELYRDGNSAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P608</accession>
    <name>A0A2M9P608_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25095</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003020">
        <property type="protein sequence ID" value="PJN92948.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002514">
        <property type="entry name" value="Transposase_8"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01527">
        <property type="entry name" value="HTH_Tnp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92948.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12605" checksum="B3530014C8FAB2C4" modified="2018-04-25" version="1" fragment="single">MPRKTHKPEEIVAKLRQVDVLVSQGRPVAEAIRAIGVTPFTYCRWRKEFGGLKTDQVKRLKELEKDRAIGTPLVRETMARERLRKAVSDLTLEKLILRGERVRAIGPSACA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P653</accession>
    <name>A0A2M9P653_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24765</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002925">
        <property type="protein sequence ID" value="PJN92988.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="124"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92988.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="12856" checksum="6BFC04C1433B269D" modified="2018-04-25" version="1" fragment="single">LTGLVAGTPVARGVYDVVGCSLASGLRETDQLGVVAGTFSINSTLHAAPCLDPRPTLQCPYPVGGLYLATIATPTSASNLEWLCKTMLQVYSTARLLGGEVRFVLGGSGHIAGVINPPAERPKY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A0</accession>
    <name>A0A2M9P6A0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">CadC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24315</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002788">
        <property type="protein sequence ID" value="PJN93040.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="OmpR/PhoB-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="76"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93040.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="76" mass="8156" checksum="333825851C1EBB13" modified="2018-04-25" version="1" fragment="single">MDLGGHRFDPESGDLFTGGGEAVPLKRQARALMQALAAAEGRVVSKDRLMDVVWPDVTVSEDSLYQAVAEARRALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6C2</accession>
    <name>A0A2M9P6C2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Resolvase/invertase-type recombinase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_23900</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002664">
        <property type="protein sequence ID" value="PJN93082.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006118">
        <property type="entry name" value="Recombinase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006119">
        <property type="entry name" value="Resolv_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036162">
        <property type="entry name" value="Resolvase-like_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00239">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00857">
        <property type="entry name" value="Resolvase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53041">
        <property type="entry name" value="SSF53041"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00397">
        <property type="entry name" value="RECOMBINASES_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00398">
        <property type="entry name" value="RECOMBINASES_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51736">
        <property type="entry name" value="RECOMBINASES_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0229">DNA integration</keyword>
    <keyword evidence="3" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Resolvase/invertase-type recombinase catalytic" evidence="6">
        <location>
            <begin position="1"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="active site" description="O-(5'-phospho-DNA)-serine intermediate" evidence="4 5">
        <location>
            <position position="6"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="134"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022908"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PIRSR" id="PIRSR606118-50"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS51736"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93082.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="15235" checksum="21F184141C25D93E" modified="2018-04-25" version="1" fragment="single">GYARVSTDDQHLDRQRHLLEAQHCDRIVEEVESGVKARRRFDALLAGLEAGDELVVEQIDRLGRTAGPTILLMDELHRRGIVMRVLALPLIDYDTPGGRYVAGTFALLAELVRAEQQQRQREGIEAARRRNQHM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6E0</accession>
    <name>A0A2M9P6E0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Metalloenzyme domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_23575</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the phosphopentomutase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002574">
        <property type="protein sequence ID" value="PJN93116.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008973">
        <property type="term" value="F:phosphopentomutase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043094">
        <property type="term" value="P:cellular metabolic compound salvage"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009117">
        <property type="term" value="P:nucleotide metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010045">
        <property type="entry name" value="DeoB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006124">
        <property type="entry name" value="Metalloenzyme"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21110">
        <property type="entry name" value="PTHR21110"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01676">
        <property type="entry name" value="Metalloenzyme"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0464">Manganese</keyword>
    <keyword evidence="3" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metalloenzyme" evidence="6">
        <location>
            <begin position="11"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="5">
        <location>
            <begin position="81"/>
            <end position="121"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010373"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023211"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01676"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93116.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="13125" checksum="58877ABE80D7A52A" modified="2018-04-25" version="1" fragment="single">HRGITTLAKGKDDAALIDATVQALRAAGDGDLVFANYVDFDTLHGHPRDVSGYARALEAFDARLPEIFATLREGDLLILTADHGNDPPRPAAGPTPIRQDRRHLLRIAGSRRSPRARTTPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6I3</accession>
    <name>A0A2M9P6I3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Peptidase_M78 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_23520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002560">
        <property type="protein sequence ID" value="PJN93119.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="2">
        <location>
            <begin position="2"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="121"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="140"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93119.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="140" mass="15812" checksum="99CE973AB4D7F97A" modified="2018-04-25" version="1" fragment="single">RVFSLLHELAHLMLRQSGVSDLDADGPRRAEDERIEVFCNQVAAAALMPRAQLLAEPLVAAKEGGRSEWSDDDIRALATIYSVSREAVVRRLLTLNRTSEAFYARKRAQYAAEFRELQEQRKEKNAGKSIARNMPRETVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6J8</accession>
    <name>A0A2M9P6J8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Plasmid replication initiator protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_23350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002514">
        <property type="protein sequence ID" value="PJN93135.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018777">
        <property type="entry name" value="Replication_initiator_prot_A"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10134">
        <property type="entry name" value="RPA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="116"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93135.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="13375" checksum="CD12713A6ED1E525" modified="2018-04-25" version="1" fragment="single">MGMATIWDADILIWGASTLNRMKQQGINNLPRTLRTTPYELLRAIKRNTGGRDYQELRPPFCVFRPLPSQHRSARQSAGKRPAHWLDSWTFDTDAETEQPRGMTLTLSDWVYEGIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R3</accession>
    <name>A0A2M9P6R3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22740</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002363">
        <property type="protein sequence ID" value="PJN93200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="1"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="97"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="104"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13487" checksum="8D66A475EE1FF855" modified="2018-04-25" version="1" fragment="single">KPTQNAFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSAPPPVVPSRQGAILNTRFQSQMDERLGSRQASRRCSRRSVDFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6S5</accession>
    <name>A0A2M9P6S5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type II toxin-antitoxin system MqsA family antitoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22405</name>
        <name evidence="1" type="ORF">CNY89_30485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004806">
        <property type="protein sequence ID" value="PJN92347.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002280">
        <property type="protein sequence ID" value="PJN93246.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="28"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92347.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93246.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="28" mass="3176" checksum="9F3D84375DFAEC0E" modified="2018-04-25" version="1" fragment="single">MRPMTLSYKGRSVEIDMPGWYAEGVEDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P726</accession>
    <name>A0A2M9P726_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21740</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002109">
        <property type="protein sequence ID" value="PJN93319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18334" checksum="3ADA42403E9C7B01" modified="2018-04-25" version="1" fragment="single">AIIAMAVNTDGRREIVGLHIGPSEAEPFWASFLKDLVRRGLKGVKLVISDAHEGLKAAIRRVIGATWQRCRVHFARNALAYVPRGQHAMVAAAIRQAFIQPDRKSAGETWRHVADQLRGRWPKLGALMDEAEEDVLAYMTFPSQHRVKLHSTNPLERLNKEVK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P744</accession>
    <name>A0A2M9P744_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Damage-inducible protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21195</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001989">
        <property type="protein sequence ID" value="PJN93384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006935">
        <property type="entry name" value="Helicase/UvrB_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04851">
        <property type="entry name" value="ResIII"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ResIII" evidence="1">
        <location>
            <begin position="8"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04851"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="18659" checksum="70057C5B1846E70A" modified="2018-04-25" version="1" fragment="single">AQKAHGLPAFDLIVCDEAHRTTGATLAGEDESNFVKVHSDATIRGKKRLYMTATPRIFGDSVKARAEEADAILASMDDEALFGETLFYRGFSWAVQNSLLSDYKVIVLAMDEGLVSAAVQKRLGDGTSELVLDDATKIVGCYKALTKADMKLDVAADPLPMKRAVAFCKDIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P751</accession>
    <name>A0A2M9P751_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_21500</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002059">
        <property type="protein sequence ID" value="PJN93349.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="55"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="72"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93349.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="98" mass="11055" checksum="2EAFC1E5D0515C73" modified="2018-04-25" version="1" fragment="single">MDMAKKIDDAVLDELLRGCERPEDLMADGGLMKELRKALMQRMLGAELTEHLGYEHGEAAPPVQTNRRNGVSRKTLKSEDGAFEIEVPRDREGSFEPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P792</accession>
    <name>A0A2M9P792_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002006">
        <property type="protein sequence ID" value="PJN93378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036526">
        <property type="entry name" value="C-N_Hydrolase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001110">
        <property type="entry name" value="UPF0012_CS"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56317">
        <property type="entry name" value="SSF56317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01227">
        <property type="entry name" value="UPF0012"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="24"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic residues" evidence="1">
        <location>
            <begin position="40"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="170"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="170" mass="18525" checksum="CF820BF9AF0B58E8" modified="2018-04-25" version="1" fragment="single">RLAGGAQQDLARSLGGLAADLRHRAARHPGAPGALRQDPHVRRRSRRGRALPRIRRLPPRRPGRRRARGRDQPRHDHLLRPALPGPLPPSRPRRRPGPRHPLGLHRADRQGPLGSPCCAPAIETGSYVLAPAQSGEHLVAPAAGISLGMTICYDLRFPGLYRRLAQGGAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A1</accession>
    <name>A0A2M9P7A1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protoporphyrinogen IX oxidase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="17" type="ORF">CNY89_21085</name>
    </gene>
    <organism evidence="17 18">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="17 18" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="17 18">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3 A + protoporphyrinogen IX = 3 AH2 + protoporphyrin IX</text>
            <dbReference type="Rhea" id="RHEA:62000"/>
            <dbReference type="ChEBI" id="CHEBI:13193"/>
            <dbReference type="ChEBI" id="CHEBI:17499"/>
            <dbReference type="ChEBI" id="CHEBI:57306"/>
            <dbReference type="ChEBI" id="CHEBI:57307"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="5">Porphyrin-containing compound metabolism; protoporphyrin-IX biosynthesis; protoporphyrin-IX from protoporphyrinogen-IX: step 1/1.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the HemJ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="17">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001965">
        <property type="protein sequence ID" value="PJN93399.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00251">
        <property type="reaction ID" value="UER00324"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006782">
        <property type="term" value="P:protoporphyrinogen IX biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005265">
        <property type="entry name" value="HemJ-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03653">
        <property type="entry name" value="UPF0093"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="9" id="KW-0349">Heme</keyword>
    <keyword evidence="14" id="KW-0408">Iron</keyword>
    <keyword evidence="15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="13" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="18" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="10 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="12 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="17">
        <location>
            <position position="41"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00005073"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00006501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00017504"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="EMBL" id="PJN93399.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="41" mass="4667" checksum="93A7B71F068F25D6" modified="2018-04-25" version="1" fragment="single">MGNLLAAAYPWTKALHIVSMVAWMAGLFYLPRLFVYHAERG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A9</accession>
    <name>A0A2M9P7A9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ferredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_20990</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 7">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2 7">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001945">
        <property type="protein sequence ID" value="PJN93413.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000813">
        <property type="entry name" value="7Fe_ferredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022569">
        <property type="entry name" value="Fd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11953">
        <property type="entry name" value="DUF3470"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00037">
        <property type="entry name" value="Fer4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00354">
        <property type="entry name" value="7FE8SFRDOXIN"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6 7" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 7" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="7" id="KW-0813">Transport</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="8">
        <location>
            <begin position="31"/>
            <end position="60"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU364098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93413.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="12623" checksum="AA9BB548C488D9F9" modified="2018-04-25" version="1">MTYVVTDNCIACKYTDCVEVCPVDCFYEGENMLVIHPDECIDCGVCEPECPADAIRPDTEPHLEEWVSFNRKFSELWPVLATKRDPLPEATERDGEKDKLAKYFSEAPGEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7D6</accession>
    <name>A0A2M9P7D6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001852">
        <property type="protein sequence ID" value="PJN93474.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="2">
        <location>
            <begin position="37"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93474.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="8707" checksum="8430477A01F49053" modified="2018-04-25" version="1" fragment="single">MAPSSPLRRSWPSLRRQSSTGAPSRRASRPRTPAPRASRDECLNEQLFFSKNHARAVVAGWIGDFNTAQPHSAIGYMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E1</accession>
    <name>A0A2M9P7E1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_20865</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001918">
        <property type="protein sequence ID" value="PJN93429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="8124" checksum="90AC7EEC1DF6D9AC" modified="2018-04-25" version="1" fragment="single">IYTTNAIESLNRIIRKAIKTRGSFPSEDAAEKLIYLAIRGHEKTARTVRGWLTAVNQFAIMFEDRFKPIQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7G5</accession>
    <name>A0A2M9P7G5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Carbohydrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20505</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001840">
        <property type="protein sequence ID" value="PJN93482.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93482.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17106" checksum="6992143A25583B51" modified="2018-04-25" version="1" fragment="single">IGGSYEWDSTYAKYADPLKEGKLVPVPPFQVEGATTDGVYKKPSMVFSISKNSKNPQAAAEIVNCLLNDPEAVLILGDSRGLPASAIALETLTEAGKLSPELIAATEIVAKSTGPAVSPVNEHPAVRDAFQSAIEEFAYGQVTAEDAAAMIIKDIQRATARM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7P1</accession>
    <name>A0A2M9P7P1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19820</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001700">
        <property type="protein sequence ID" value="PJN93576.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03401">
        <property type="entry name" value="TctC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="204"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93576.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="204" mass="21942" checksum="166996AFD0B0BD51" modified="2018-04-25" version="1" fragment="single">FTFTIPASLGPKDYAAFRELVRANPGLYKHGTPGAGANIHLSAELLKLNEGLDMPAIHYKGAPDIMTDLLSNQIQMANNAISTTAAHIRAGTLVPIFTAGSERETEIEGIPTSVELGIADVDRINNWYALHAPKGTPEDILDQVHAAAVKAIGTQAAQEKARAAGMKLVGDSRVDFTARLKADDAIFAERRPGDRHPCRLRSRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R9</accession>
    <name>A0A2M9P7R9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19740</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001684">
        <property type="protein sequence ID" value="PJN93587.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93587.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6614" checksum="AB71E2822A65E257" modified="2018-04-25" version="1" fragment="single">ARGRLTRGWAHFLYATQHGYRSYAKGGGNSSNNEDWTAAYAANQNVRLTAASGLVRMLLAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7X9</accession>
    <name>A0A2M9P7X9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001624">
        <property type="protein sequence ID" value="PJN93629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="2"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="31"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="31" mass="3342" checksum="D0AED7A8B5E6836A" modified="2018-04-25" version="1" fragment="single">MNHARAVVAGWVEDFNTARPHSAIGYMTPAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P808</accession>
    <name>A0A2M9P808_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19280</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001590">
        <property type="protein sequence ID" value="PJN93658.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93658.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11312" checksum="57FD7A42736D5DBA" modified="2018-04-25" version="1" fragment="single">ELAQFYLSEAARLADAAIVSAEIEKAETLRKWLLGPSWPHPQILPSEVVRHAPIRALRESPAARSALATLEKHGWVVRLPEGAEVRGVARKEAFQIVRAGDAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P851</accession>
    <name>A0A2M9P851_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18985</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001540">
        <property type="protein sequence ID" value="PJN93703.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025841">
        <property type="entry name" value="CP_ATPgrasp_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14403">
        <property type="entry name" value="CP_ATPgrasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="231"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93703.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="25358" checksum="14566AEE03513C2C" modified="2018-04-25" version="1" fragment="single">DSDPTIVLLSPGSFNSAYYEHSFLADQMGIELVEGQDLFVQGEFVWMRTTTGPKRVDVIYRRIDDSFLDPLCFRPDSMLGVPGLMNVYRSGGVAIASAPGAGVADDKAVYTYVPDMIRFYLGEQPILKNVQTWKCAKPDDRKFVLENLHELVVKEVHGSGGYGMLVGPASTKEQISAYAERIKAAPDDFIAQPTLSLSTVPTFVESGLAPRHVDLRPYCLVGREVHLCPGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P852</accession>
    <name>A0A2M9P852_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Indolepyruvate ferredoxin oxidoreductase</fullName>
            <ecNumber evidence="2">1.2.7.8</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.7.8" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001518">
        <property type="protein sequence ID" value="PJN93722.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043805">
        <property type="term" value="F:indolepyruvate ferredoxin oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030976">
        <property type="term" value="F:thiamine pyrophosphate binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029061">
        <property type="entry name" value="THDP-binding"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011766">
        <property type="entry name" value="TPP_enzyme-bd_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02775">
        <property type="entry name" value="TPP_enzyme_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52518">
        <property type="entry name" value="SSF52518"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="1">
        <location>
            <begin position="179"/>
            <end position="209"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="237"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93722.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="237" mass="25987" checksum="4DF597AA98D5EC70" modified="2018-04-25" version="1" fragment="single">PEGARAYAGIGCHYMVQWMDRETSGFTHMGAEGANWIGEAPFSTRRHVFQNLGDGTYNHSGSLAIRAALAANVNITYKILYNDAVAMTGGQPNEGGLTAPRIARELIAMGVKRVVGVYDPKEAVNPADFPIPMRTRDDLDAVQRELQEVEGVTAILYIQTCAAEKRRRRKRGKFPDPDRRVFINPEVCEGCGDCGVQSNCVSIVPLETPLGRKRAIDQSSCNKDFSCLKGFCPSFVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B5</accession>
    <name>A0A2M9P8B5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001456">
        <property type="protein sequence ID" value="PJN93786.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="17"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015000139" evidence="1">
        <location>
            <begin position="18"/>
            <end position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93786.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="6494" checksum="19821269CC3D01E0" modified="2018-04-25" version="1">MAIAALVFTAAAGAVQAAGGSLVCKDSFKTLKEIRAEVGGSPAFINIVNQYVTRWDAPGSAPAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C7</accession>
    <name>A0A2M9P8C7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18500</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001467">
        <property type="protein sequence ID" value="PJN93773.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93773.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11019" checksum="021B3C0F99826C24" modified="2018-04-25" version="1">MTLETIAPIQDDPVDRPASHGGLISPAMPELVLALASYTTSRDTTNFWGRCAAHSDLRTYGRLVCVYDGSEIRSRVASGHEDLACSLAGRRLYALLHCGGRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8D8</accession>
    <name>A0A2M9P8D8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Crp/Fnr family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18310</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001437">
        <property type="protein sequence ID" value="PJN93805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00038">
        <property type="entry name" value="CAP_ED"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018490">
        <property type="entry name" value="cNMP-bd-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000595">
        <property type="entry name" value="cNMP-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00027">
        <property type="entry name" value="cNMP_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51206">
        <property type="entry name" value="SSF51206"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50042">
        <property type="entry name" value="CNMP_BINDING_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cyclic nucleotide-binding" evidence="1">
        <location>
            <begin position="14"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="11014" checksum="2B73A6286101A7F4" modified="2018-04-25" version="1" fragment="single">MYQLDASLLTDLPPFSRLQRTELREILDRATPRRYVEGAEVFTEGMPADQFYILLDGFIRVLRTTREGEQVIALHIPPGELFGIAPAFSRDTYPATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8M2</accession>
    <name>A0A2M9P8M2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17860</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001381">
        <property type="protein sequence ID" value="PJN93878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046429">
        <property type="term" value="F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016114">
        <property type="term" value="P:terpenoid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011005">
        <property type="entry name" value="Dihydropteroate_synth-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004588">
        <property type="entry name" value="IspG_bac-typ"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30454">
        <property type="entry name" value="PTHR30454"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04551">
        <property type="entry name" value="GcpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51717">
        <property type="entry name" value="SSF51717"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00612">
        <property type="entry name" value="ispG_gcpE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="4" id="KW-0408">Iron</keyword>
    <keyword evidence="5" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0414">Isoprene biosynthesis</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="277"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="277" mass="29774" checksum="E468098C34F83B49" modified="2018-04-25" version="1" fragment="single">VQTMTNTLTHDVKATVEQIRRCVEVGADIVRVSCPDVESTAALKEIVRQSEVPIVADIHFHYKRAIEAAEAGAACLRINPGNIGSAERVREVIKAARDHGCSIRIGVNAGSLERHLLEKYGEPCPEAMIESGLDHIRILEDNDFHEFKISVKASDVFLAAAAYQGLAEATDAPIHLGITEAGGLMSGTVKSAIGLGNLLWMGIGDTLRVSLSADPVEEVKVGFEILKGLGLRHRGVNIISCPSCARQGFDVIKTVEALEKRLEHVKTPLSLSIIGCV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8U1</accession>
    <name>A0A2M9P8U1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_17370</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001314">
        <property type="protein sequence ID" value="PJN93952.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857794" evidence="2">
        <location>
            <begin position="28"/>
            <end position="151"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="34"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="151"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93952.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="151" mass="16034" checksum="9AB7E51633DED276" modified="2018-04-25" version="1" fragment="single">MATARYAACAGALAAFAGFGATVPAFAQETPAKPNILFIMGDDIGYMQPSIYHRGLMVGETPNIDRIGQEGALFTDYYAEQSCTAGRNAFFTGMHPLRTGMIPPQLPGSPSYLRPGTPAIAKFLHDLGYNTGEFGKNHLGDHTDALPTAHG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8V8</accession>
    <name>A0A2M9P8V8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">S-(Hydroxymethyl)glutathione dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17245</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001298">
        <property type="protein sequence ID" value="PJN93973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013149">
        <property type="entry name" value="ADH-like_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00107">
        <property type="entry name" value="ADH_zinc_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ADH_zinc_N" evidence="1">
        <location>
            <begin position="64"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00107"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="242" mass="26100" checksum="D41E60A1C0E484B0" modified="2018-04-25" version="1" fragment="single">HYMGCSTFSNYTVLPEIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGADMIIGVDINNDRKEWGERFGMTHFVNPKEIEGSIVQHIVNMTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGVSVVIGVAPAGAEIATRPFQLVTGRVWKGTAFGGARGRTDVPKIVDWYMDGKIQIDPLITHTMPLEDINKGFELMHGGKSIRGVVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Y2</accession>
    <name>A0A2M9P8Y2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Acetyl/propionyl-CoA carboxylase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17105</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001280">
        <property type="protein sequence ID" value="PJN93998.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011761">
        <property type="entry name" value="ATP-grasp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005479">
        <property type="entry name" value="CbamoylP_synth_lsu-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02786">
        <property type="entry name" value="CPSase_L_D2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50975">
        <property type="entry name" value="ATP_GRASP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00866">
        <property type="entry name" value="CPSASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2 4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Biotin carboxylation" evidence="6">
        <location>
            <begin position="1"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="domain" description="ATP-grasp" evidence="5">
        <location>
            <begin position="120"/>
            <end position="278"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="278"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00409"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93998.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="29535" checksum="09DDC9104DDC1891" modified="2018-04-25" version="1" fragment="single">MFDKILIANRGEIACRVERTAKAMGIKTVAVYSDADANALHVTGADEAVHIGPPAVNQSYIVIDKIIEAVKKTGAQAVHPGYGFLSERAEFAQALDAIGVAFIGPPVGAIQAMGDKITSKKLAAEAGVSTVPGYMGLIDDAEHAVVIARQIGYPVMIKASAGGGGKGMRIAWTDDEAREGFARSKSEAASSFGDDRIFIEKFVTQPRHIEIQVLGDKHGNCLYLGERECSIQRRNQKVVEEAPSPFLDAATRKAMGEQAVALAKAVDYCSAGTVEFIV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P914</accession>
    <name>A0A2M9P914_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Coproporphyrinogen III oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001252">
        <property type="protein sequence ID" value="PJN94037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034505">
        <property type="entry name" value="Coproporphyrinogen-III_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010723">
        <property type="entry name" value="HemN_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13932">
        <property type="entry name" value="PTHR13932"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06969">
        <property type="entry name" value="HemN_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HemN_C" evidence="1">
        <location>
            <begin position="219"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06969"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="302" mass="32208" checksum="920BC011DD30D8AB" modified="2018-04-25" version="1" fragment="single">ITLEANPTSVEAGRFRGYAAAGVNRLSMGVQSLRDADLRALGRMHTAAEARAAFDVARNCFGRVSFDLIYARQGQDMTGWRAELAEALAMAVDHLSLYQLTIEPGTRFGELAARGRLRGLPSEGLGADLFQATREICAAAGMPAYEISNHARPGLESRHNLIYWRYGDYVGIGPGAHGRITHGGRRWAVEAVTRPEAWLEAVESGADSTTREEVLPDAQSDEMMLMGLRLAEGVSLARFEALAGRPLTLAPDLLDFGLVEIEAGRIRATAKGVPLLDAVLKNRCPGSLPAASAPGGGQASNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P957</accession>
    <name>A0A2M9P957_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Pyridoxamine 5'-phosphate oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16720</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001228">
        <property type="protein sequence ID" value="PJN94065.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019576">
        <property type="entry name" value="Pyridoxamine_oxidase_dimer_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10590">
        <property type="entry name" value="PNP_phzG_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PNP_phzG_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF10590"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94065.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="22" mass="2647" checksum="41E7EA65C1BCC299" modified="2018-04-25" version="1" fragment="single">HDRFRWTRTAPGAPWQIARLNP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9E1</accession>
    <name>A0A2M9P9E1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_16330</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001180">
        <property type="protein sequence ID" value="PJN94129.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010290">
        <property type="entry name" value="TM_effector"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05977">
        <property type="entry name" value="MFS_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="126"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94129.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13263" checksum="7C84BB4DFC979902" modified="2018-04-25" version="1" fragment="single">MLRVLAHRTYRHLFLAQVVSLVGTGLATVALGLLAFDLAGSEAGAVLGTALAIKMIAYVGVAPVAAAFAERVPRRALLVALDLVRAAVALCLPFVTEIWQVYLLIFVLQSASAGFTPTFQATIPDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F2</accession>
    <name>A0A2M9P9F2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_16180</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001164">
        <property type="protein sequence ID" value="PJN94155.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005495">
        <property type="entry name" value="LptG/LptF_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03739">
        <property type="entry name" value="LptF_LptG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="145"/>
            <end position="164"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="176"/>
            <end position="193"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="205"/>
            <end position="223"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94155.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="236" mass="25819" checksum="0C22F97F639CD553" modified="2018-04-25" version="1">MRSDLASALIVERQFLHPIGGLTLYIAEVGDGGEMGGVFLNDQRDPARVVTYSAETARFLREGDEARLVMDDGVALGLDAGSTQLNAVEFDRFVFDISDLVAREEDRAPRPSEYGLWSLLNPTPEMLTGRKARLGPFIAEGHYKIVLPLLAWLYPPVALVTLLAGGYRRSGFGRRVIVAVGVCVALQSLAILARSRVQDDAHLWPAMYLPVLLGLGYVAALMLRLSRPTSRRRAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9F9</accession>
    <name>A0A2M9P9F9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001148">
        <property type="protein sequence ID" value="PJN94176.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="172"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94176.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="18159" checksum="3F2ED83A229CA987" modified="2018-04-25" version="1" fragment="single">MRSLVLASTTALTIATGAFGAELWVGFDLSDSSPLLNEDTVALSAGTMVATAVRSMQRGDAVMLRSFGEAGVSEQQINITINLTGQQRPDRIAAELETLIASLPERARQGQLQLEGRTNLMGWLERVGPTLNCNATPTKVIVLTDGIEWSDAIQGDDLLQGAPLPAPSGAIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I9</accession>
    <name>A0A2M9P9I9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15900</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001128">
        <property type="protein sequence ID" value="PJN94203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="18"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014922511" evidence="1">
        <location>
            <begin position="19"/>
            <end position="162"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="17196" checksum="CF3C189FB9E36475" modified="2018-04-25" version="1">MRFLPAIAAILIATTGNAATITSGLGGGLSEIRANERSGPYSSDWSSIPGRGNEIAHQGRDAAVFEDAGKGQIIFKVKADANGRARVAFQDVGDTANFHSFSINGETIDLPSQRRDGGWFTTELDFGVGGLGWHVVVARTTLKEGLSRSRQDGFGVCRSRAK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W7</accession>
    <name>A0A2M9P9W7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15195</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001047">
        <property type="protein sequence ID" value="PJN94325.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94325.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24806" checksum="BF3932DD61C2F5AC" modified="2018-04-25" version="1">MVATFWWDKVGSEFESASGDPYRAIMGATGKLAAQTKPGEGVRGGYLEKSGTSMKLVTSPTETEVELGDGPQIRRKLRDMLPSKAVAPAHRDILIPEGYCLFMHGKPSEIATALAADMASGLRALVRFQEKLEMRWLRYMKPLQTDTIRTILGVGGPTHYWGLPLAPERGTHTGPRYEPGTKFDERGWMRGRVYDLEGYDAAKGGVFSAVTLSDLHDYVNRLDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA10</accession>
    <name>A0A2M9PA10_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Autotransporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14940</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001023">
        <property type="protein sequence ID" value="PJN94367.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019867">
        <property type="term" value="C:outer membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.128.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005546">
        <property type="entry name" value="Autotransporte_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036709">
        <property type="entry name" value="Autotransporte_beta_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006315">
        <property type="entry name" value="OM_autotransptr_brl"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03797">
        <property type="entry name" value="Autotransporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00869">
        <property type="entry name" value="Autotransporter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103515">
        <property type="entry name" value="SSF103515"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01414">
        <property type="entry name" value="autotrans_barl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51208">
        <property type="entry name" value="AUTOTRANSPORTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Autotransporter" evidence="1">
        <location>
            <begin position="10"/>
            <end position="299"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94367.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="299" mass="30190" checksum="5D5BF86C8FD0BCA7" modified="2018-04-25" version="1">MAFAPMDSPTTGRGVTLWGQALGARINADGDAGASGSRSDFTGVFGGADMRVGAQGVVGFAAGYTWSDTDVDGGGGTADADSLLLALYGGASAGPWSLRGGLSYAMSSIDTARDADFAGFSQSLDASYDATTAQVFGEVGYAIERGPVAIEPFLGLAWVRLDADGFTESGGEAALSGEGETSTVGYSTLGFRAGRSFETGLGAAGGSGAARAMTFTPHLSLAWRHAWGDLSTSASLSFAEMTAQGFVVSGVVLAEDTGIVDLGFDLAINPQATLGLAYLGQFSDGADTNALRATLAWAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA25</accession>
    <name>A0A2M9PA25_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14800</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001009">
        <property type="protein sequence ID" value="PJN94393.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009506">
        <property type="entry name" value="DUF1127"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06568">
        <property type="entry name" value="DUF1127"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94393.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7275" checksum="8137435A8068B6CA" modified="2018-04-25" version="1">MAHIISFPASAPSLGLVDRVKKLFADLRLYQATVRELSDLSDRELADLGISRSSIRDIARQSVYAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA28</accession>
    <name>A0A2M9PA28_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">3,4-dihydroxy-2-butanone 4-phosphate synthase</fullName>
            <ecNumber evidence="6">4.1.99.12</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_14830</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-ribulose 5-phosphate = (2S)-2-hydroxy-3-oxobutyl phosphate + formate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:18457"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15740"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="ChEBI" id="CHEBI:58830"/>
            <dbReference type="EC" id="4.1.99.12"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="3">Cofactor biosynthesis; riboflavin biosynthesis; 2-hydroxy-3-oxobutyl phosphate from D-ribulose 5-phosphate: step 1/1.</text>
    </comment>
    <comment type="similarity">
        <text evidence="5">In the C-terminal section; belongs to the GTP cyclohydrolase II family.</text>
    </comment>
    <comment type="similarity">
        <text evidence="4">In the N-terminal section; belongs to the DHBP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.99.12" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01001012">
        <property type="protein sequence ID" value="PJN94387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00275">
        <property type="reaction ID" value="UER00399"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008686">
        <property type="term" value="F:3,4-dihydroxy-2-butanone-4-phosphate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009231">
        <property type="term" value="P:riboflavin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10990">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017945">
        <property type="entry name" value="DHBP_synth_RibB-like_a/b_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000422">
        <property type="entry name" value="DHBP_synthase_RibB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032677">
        <property type="entry name" value="GTP_cyclohydro_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036144">
        <property type="entry name" value="RibA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00926">
        <property type="entry name" value="DHBP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00925">
        <property type="entry name" value="GTP_cyclohydro2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF142695">
        <property type="entry name" value="SSF142695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55821">
        <property type="entry name" value="SSF55821"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0686">Riboflavin biosynthesis</keyword>
    <feature type="domain" description="GTP_cyclohydro2" evidence="10">
        <location>
            <begin position="77"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002284"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004904"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00005520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00008976"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012153"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00018836"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022619"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00925"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN94387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="224" mass="24198" checksum="1C1F48AD61D992A2" modified="2018-04-25" version="1" fragment="single">VLVRAGHTEAAVDISRLAGLNPAGVICEIMNEDGTMSRLPDLIGFAQRHGLKIGTISDLIAYRRRHDNLVRETSVRSICSEYGGTWQMRVFGDVTGGGEHIVLTKGDISTPEPVLARMHAVNPVEDLLAVHPGRTHQLRDSMLAVAEEGRGVIVVLRDMAAKLEVGDHVSPHRLRQYGIGAQILSALGIRDLILLTNSPTPKVVGLEGYGLSITATRPIPARKD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA48</accession>
    <name>A0A2M9PA48_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001002">
        <property type="protein sequence ID" value="PJN94402.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94402.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="134" mass="13528" checksum="D53F53639AEE60E9" modified="2018-04-25" version="1" fragment="single">ASETVLADACPEDAMILDAGPASVVRVVEAFGIQDVGETAGGAGDLAMAPVPSAAVAQLDQRQPAGIAARPAAVHFLGDVVAPRPRPAESGAQHVPVALRRHRDPSGHAPPPCLHANLAGAACRRKLEGRGAKS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAA7</accession>
    <name>A0A2M9PAA7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Metalloprotease TldD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">tldD</name>
        <name evidence="1" type="ORF">CNY89_14360</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000961">
        <property type="protein sequence ID" value="PJN94462.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008237">
        <property type="term" value="F:metallopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="1" id="KW-0645">Protease</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94462.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6814" checksum="682EC374312DC1FF" modified="2018-04-25" version="1" fragment="single">MPQTPRFRPFETELDPDRALAILRDAVAGADDGELFLERSRSEALVFDDGRLKTASYDAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE2</accession>
    <name>A0A2M9PAE2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase-like protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14065</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000933">
        <property type="protein sequence ID" value="PJN94513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bact_transglu_N" evidence="1">
        <location>
            <begin position="7"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9641" checksum="F3DCF4EE5F355FCF" modified="2018-04-25" version="1" fragment="single">MSIKAGIYHLTHYKYDRPVTLGPQVIRLRPAPHSRTRVISHSLRVSPAGHFVNHQQDPYGNWLARFVFPEPVTELKIEVDLVAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAM2</accession>
    <name>A0A2M9PAM2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Acetyl-CoA C-acyltransferase</fullName>
            <ecNumber evidence="2">2.3.1.9</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13735</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.9" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000902">
        <property type="protein sequence ID" value="PJN94572.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003985">
        <property type="term" value="F:acetyl-CoA C-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="CDD" id="cd00751">
        <property type="entry name" value="thiolase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.47.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002155">
        <property type="entry name" value="Thiolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016039">
        <property type="entry name" value="Thiolase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020616">
        <property type="entry name" value="Thiolase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00108">
        <property type="entry name" value="Thiolase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53901">
        <property type="entry name" value="SSF53901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01930">
        <property type="entry name" value="AcCoA-C-Actrans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Thiolase_N" evidence="1">
        <location>
            <begin position="5"/>
            <end position="261"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="263"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00108"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94572.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="263" mass="27067" checksum="C8B867B4B177A95D" modified="2018-04-25" version="1" fragment="single">MTQDIVILDGARTAIGAFGGSLAAMPPTKLAAHVAREALLRSGVEGGQIGQVFFGHVINTEPRDMYVSRVAALDAGVPDSAGAMNVNRLCGSGAQAIASAFQVLALGDADFALAGGVENMSRSPYALTSARWGQKMGDTAALDMMVGALTCPMGTGHMGVTAENVAAEAQITREDQDAFALESQNRAATAIKEGRFASQIVPIEVKVKRDMVAWATDEHPKATTPEALAKLRPAFQKDGTVTAGNASGLNDGAAAVVVARAEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV6</accession>
    <name>A0A2M9PAV6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5 6">50S ribosomal protein L19</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rplS</name>
        <name evidence="7" type="ORF">CNY89_13130</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5 6">This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the bacterial ribosomal protein bL19 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000839">
        <property type="protein sequence ID" value="PJN94668.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.790">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00402">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038657">
        <property type="entry name" value="L19_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001857">
        <property type="entry name" value="Ribosomal_L19"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018257">
        <property type="entry name" value="Ribosomal_L19_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008991">
        <property type="entry name" value="Translation_prot_SH3-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR15680">
        <property type="entry name" value="PTHR15680"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01245">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002191">
        <property type="entry name" value="Ribosomal_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00061">
        <property type="entry name" value="RIBOSOMALL19"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50104">
        <property type="entry name" value="SSF50104"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01024">
        <property type="entry name" value="rplS_bact"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01015">
        <property type="entry name" value="RIBOSOMAL_L19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 7" id="KW-0689">Ribosomal protein</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005781"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00021191"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000559"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94668.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14374" checksum="266BDC429DE9490A" modified="2018-04-25" version="1">MNIIQQLEAEQIAALGKDIPDFAPGDTVRVGYKVTEGTRSRVQAYEGVCIARNNGKGIGASFTVRKISFGEGVERVFPLHSPNIDAITVVRRGKVRRAKLYFLRERRGKSARIVEKTNYRAPKPAATTEA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY2</accession>
    <name>A0A2M9PAY2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2849 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000824">
        <property type="protein sequence ID" value="PJN94696.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021270">
        <property type="entry name" value="DUF2849"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11011">
        <property type="entry name" value="DUF2849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="80"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94696.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10884" checksum="184F79FA562441D5" modified="2018-04-25" version="1">MARKFTPQIATANDLLEGDVIYLTAAGDWSREIGEAAIAANPEAAAALLARAQTFAGQVVGAYLADARIDDEGRAAPAHFREEFRTRGPSNYPEHGRQAER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB53</accession>
    <name>A0A2M9PB53_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12580</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000788">
        <property type="protein sequence ID" value="PJN94758.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94758.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="13708" checksum="27B875B271E9498F" modified="2018-04-25" version="1" fragment="single">VWIGAPGGRAWRMRPLPLGTVANCIFNRPAIDSLTAAAFDWKLETDNVSNTAVEASIAADLVVRLQMRSTVDPQFEIIDHGGALPPLPDFHINLYLTPGPRRRLAEPLARELRLAFGPADLLAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB62</accession>
    <name>A0A2M9PB62_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">PleD family two-component system response regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_12455</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000778">
        <property type="protein sequence ID" value="PJN94777.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000160">
        <property type="term" value="P:phosphorelay signal transduction system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01949">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000160">
        <property type="entry name" value="GGDEF_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029787">
        <property type="entry name" value="Nucleotide_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043128">
        <property type="entry name" value="Rev_trsase/Diguanyl_cyclase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00990">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00267">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55073">
        <property type="entry name" value="SSF55073"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00254">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50887">
        <property type="entry name" value="GGDEF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="4"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="Response regulatory" evidence="2">
        <location>
            <begin position="157"/>
            <end position="275"/>
        </location>
    </feature>
    <feature type="domain" description="GGDEF" evidence="3">
        <location>
            <begin position="325"/>
            <end position="402"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="402"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50887"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94777.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="402" mass="45123" checksum="FB0ED5BE6CA3858B" modified="2018-04-25" version="1" fragment="single">MSGRVLVVDDVATNRLLLRAKLSSAYYDVSVAENGHQALEMARREQPDMIMLDVMMPDLDGFEVCAKLKSMEETAHIPVIMVTALDTPEERIRGLEVGADDFLSKPFNDLALFARVRNLMRMKMMFDELRLRDLTSRELGLTDFVTEQEIELELGGSLLLAPPSEAAGADWAGELRRRLNLSTIVTSSEREALNLARLELPDCFVVHQKLMEGGDGLRLVSALRARPETRQSAVILVVEAGDVQTAAKGLDLGASDYIEAPFDMNELIVRVRSQLRRKRYSDRLRTNVRNGLKMAVIDPLTGIYNRRYAAQHLLRVMERARETEGVFAVMMMDLDKFKSINDRFGHDAGDAVLKEFSRRLQENIRGVDLVARFGGEEFFVAMPDIDHGAAAAAAERIRRAVE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBA0</accession>
    <name>A0A2M9PBA0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000758">
        <property type="protein sequence ID" value="PJN94813.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="111"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94813.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="12476" checksum="7A0430B52395E296" modified="2018-04-25" version="1" fragment="single">MPVYFGPQRTNAGFGDVRLGARARWSERDLLNYDTDQRLLHADDIRDEAERAAFMAMLRRRYPELNSAPCEMEQQAAAAYRVKHGLRVASQVEAGVPLVIAAAQADSELRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE4</accession>
    <name>A0A2M9PBE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12035</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000733">
        <property type="protein sequence ID" value="PJN94849.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94849.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="174" mass="19578" checksum="FE5F4A09181486EA" modified="2018-04-25" version="1">MTKRERAKLRAALMGAIQRTYAENGGRATPSQIIEVMFREHPTLIDEAADRLVRASLLSMVNRAFKSADKADRDEMQIDLFGNREPGLVIPKSIAIPSSGGCREMQWIATASATVAEIDQYIEVLDKGIEADSRKREQLTIFRERIMELSDTDDLDTPIVDMLESLRARKRGRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI8</accession>
    <name>A0A2M9PBI8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_11715</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000706">
        <property type="protein sequence ID" value="PJN94898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="20"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="68"/>
            <end position="87"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="103" mass="11166" checksum="735E0194965CC009" modified="2018-04-25" version="1" fragment="single">MLLGPALLKTRFGVDEVVTTLLLNFVVLLFVSMLLEGLLKDARGLGWPQSAKVIDAAQWPRLIRGKRLHWGFVVGILAALGVAALMARTTLGYAMRAVGHNAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI9</accession>
    <name>A0A2M9PBI9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000707">
        <property type="protein sequence ID" value="PJN94895.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025161">
        <property type="entry name" value="Put_IS4/IS5"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13340">
        <property type="entry name" value="DUF4096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94895.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="16722" checksum="345274C345329DD3" modified="2018-04-25" version="1">MNSGRRMRRCRPGTTQIQGRPPRCDDRAVLVGIIFVLRSGIPWEMPPRELGCSGITCWRRLRDWQEADGVWARLHRVLLERLSEAGQLDWSQAFSRRRRRGGEKGEPRLVRTRRIAAKRARSAMAWTTGDAQRLLADRDVHAHSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBU9</accession>
    <name>A0A2M9PBU9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Alcohol dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10985</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000646">
        <property type="protein sequence ID" value="PJN95018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016616">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001670">
        <property type="entry name" value="ADH_Fe/GldA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018211">
        <property type="entry name" value="ADH_Fe_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039697">
        <property type="entry name" value="Alcohol_dehydrogenase_Fe"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11496">
        <property type="entry name" value="PTHR11496"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00465">
        <property type="entry name" value="Fe-ADH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00913">
        <property type="entry name" value="ADH_IRON_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fe-ADH" evidence="2">
        <location>
            <begin position="1"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00465"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="286" mass="30958" checksum="CE04DF3D9EA20F60" modified="2018-04-25" version="1" fragment="single">SALDCGKVVAFMRGQTRPMWDFEDVDDWWSRADPEGIAPVVAIPTTAGTGSEVGRAGVITNLATRTKKVIFHPGMMPKAVICDPELTLGLPPLLTAGTGMDAFAHCLEAYCAPTFHPMAEGIAVEGMRLVRDYLPAAHRDGSDIEARAQMMAAAAMGATAFQKGLGAVHALSHPVGALYGAHHGLTNAVFLPYVLDFNRETIVDKIDRLAGWLEIEGGFSGFLDFLLRLRRDLGVPHTIDRLGVDDQRFEEMAAMAVQDPTAGGNPRRLGQDDALELYRRAYDGRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC54</accession>
    <name>A0A2M9PC54_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Globin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10600</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000614">
        <property type="protein sequence ID" value="PJN95084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019825">
        <property type="term" value="F:oxygen binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.490.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009050">
        <property type="entry name" value="Globin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012292">
        <property type="entry name" value="Globin/Proto"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46458">
        <property type="entry name" value="SSF46458"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17747" checksum="BD1CA11FA38BD5F0" modified="2018-04-25" version="1">MTTAPPTRSFAEDKRAEIRANAAAIGIDEAYISRLVECFYARIRADASLGPIFEREIGEKWDPHLVRMKAFWTSVALNAGTYSGRPVPVHQRLDGVSRRHFAHWLALFRETLTETAPSAEAVEYFMARAESIAASLQMAMFDRFASADRAAPVLARGATS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC58</accession>
    <name>A0A2M9PC58_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10545</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000610">
        <property type="protein sequence ID" value="PJN95094.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024501">
        <property type="entry name" value="DUF3141"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11339">
        <property type="entry name" value="DUF3141"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95094.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="301" mass="33780" checksum="E535F5FFD88C81A1" modified="2018-04-25" version="1">MPRLDQLGHLAEKERQQQRADMCAVHVGGVEGGKWLAMLASDLGHGLFDGALLVDNFEKLNPSRSYFGKYYDLYAKVDAEAPRFLEFERWWGGFFLMNAAEIDWIVDNVFVGNRLAQNEAELEPGRKVDLKAVRAPVIVFASHGDNITPPQQALNWIPDTYSDVDEIRIRGQRIIYMVHESIGHLGIFVSGSVALKEHTEVASVLETIESLAPGLYEMMIERETGEGLDKRFLVSFAERSLEDLAALDDGRADEIPFAAVARLSDVQTEAYEKTLRPLVRALSTRETARLPDNGDWMSELV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC94</accession>
    <name>A0A2M9PC94_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Carbohydrate ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_10265</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000586">
        <property type="protein sequence ID" value="PJN95138.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015000141" evidence="4">
        <location>
            <begin position="21"/>
            <end position="283"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="283"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95138.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="30542" checksum="803346ED6E45EADA" modified="2018-04-25" version="1" fragment="single">MKTTLTALALVLAASAASSAELRMSWWGGDGRHVATQEALKVCGAKFGHTIKPEFTGWQGHGEKVTTQLAGGTEADIMQINWPWLHQFSRDGSGFADLREFSDQIDLSQWTEEQLAGGTMNGKLNGIPVSVTGRVFYFNDAAFQKAGLPMPTSWADLAAAAKVMNAEDAYPFDAAKLNAIFIVSLAATQATGKDMIDPATGEIAWSEEDLTAALNFYQSLVDQGVIRAWKDAVAVGNVELFDDPAWAEGRIGGSYEWDSTYAKYADPLKEGKLVPVPPFQVEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF1</accession>
    <name>A0A2M9PCF1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7 15">NAD(P) transhydrogenase subunit beta</fullName>
            <ecNumber evidence="6 15">7.1.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="15">Nicotinamide nucleotide transhydrogenase subunit beta</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="18" type="primary">pntB</name>
        <name evidence="18" type="ORF">CNY89_09755</name>
    </gene>
    <organism evidence="18 19">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="18 19" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="18 19">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2 15">The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 15">
            <text>H(+)(in) + NAD(+) + NADPH = H(+)(out) + NADH + NADP(+)</text>
            <dbReference type="Rhea" id="RHEA:47992"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="7.1.1.1"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cell inner membrane</location>
            <topology evidence="4">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="3">Membrane</location>
            <topology evidence="3">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5 15">Belongs to the PNT beta subunit family.</text>
    </comment>
    <comment type="caution">
        <text evidence="18">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.1" evidence="6 15"/>
    <dbReference type="EMBL" id="PHNO01000546">
        <property type="protein sequence ID" value="PJN95220.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008750">
        <property type="term" value="F:NAD(P)+ transhydrogenase (AB-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050661">
        <property type="term" value="F:NADP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029035">
        <property type="entry name" value="DHS-like_NAD/FAD-binding_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012136">
        <property type="entry name" value="NADH_DH_b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034300">
        <property type="entry name" value="PNTB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02233">
        <property type="entry name" value="PNTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000204">
        <property type="entry name" value="PNTB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52467">
        <property type="entry name" value="SSF52467"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 15" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="8 15" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="14 15 16" id="KW-0472">Membrane</keyword>
    <keyword evidence="15" id="KW-0520">NAD</keyword>
    <keyword evidence="11 15" id="KW-0521">NADP</keyword>
    <keyword evidence="18" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="19" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="12 15" id="KW-1278">Translocase</keyword>
    <keyword evidence="10 16" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="13 16" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="6"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="33"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="56"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="85"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="145"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="183"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="205"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="232"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="16">
        <location>
            <begin position="256"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="domain" description="PNTB" evidence="17">
        <location>
            <begin position="7"/>
            <end position="474"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00007919"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00012943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00014581"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022519"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00022857"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00022967"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="15">
        <source>
            <dbReference type="PIRNR" id="PIRNR000204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="16">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="17">
        <source>
            <dbReference type="Pfam" id="PF02233"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="18">
        <source>
            <dbReference type="EMBL" id="PJN95220.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="19">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="477" mass="49573" checksum="E12E47D29137DFF4" modified="2018-04-25" version="1">MSTGLVTAAYVVAGVLFILALGGLSNQEKAKRAVWYGITGMALAILATIFGPGGSLLVVIPMIAIGGVIGALVAQRVQMTQMPELVAGFHSLVGLAAVFIGLNADFEAARVASAVANGTAEHLTGFAATLAHKAPVELTIMRVEIFLGVLIGAITFTGSIVAYGKLAGKVSSKALTLPGRHAINIGAGLLCLLLGILYLSGAGVWTMIVVAIIAGAIGWHLIMAIGGADMPVVISMLNSYSGWAAAAIGFTLSNDLLIVTGALVGSSGAILSYIMCKAMNRNFVSVILGGFGATTGPALEIEGEQIAIDADGVASALEEADSVIIVPGYGMAVAQAQQSISELTKRLRAKGKTVRFAIHPVAGRLPGHMNVLLAEAKVPYDIVMEMDEINEDFPETDVAIVIGSNDIVNPAAQEDPNSPIAGMPVLEVWKAKTVFVSKRGQGTGYSGIENPLFYKENTRMFYGDAKKSLDELLTRIH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCF4</accession>
    <name>A0A2M9PCF4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Inner membrane-spanning protein YciB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">yciB</name>
        <name evidence="2" type="ORF">CNY89_09770</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the YciB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000547">
        <property type="protein sequence ID" value="PJN95219.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00189">
        <property type="entry name" value="YciB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006008">
        <property type="entry name" value="YciB"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36917">
        <property type="entry name" value="PTHR36917"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04279">
        <property type="entry name" value="IspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="29"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="45"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="103"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="144"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00189"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95219.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="183" mass="20749" checksum="43EDE201455B3852" modified="2018-04-25" version="1">MVQRQLPPLLKLALEIGPIAVFFLAYRMAPGVEGLPAAERQLEQILFATAVFVPLILATLVLSWVLTRHLPKMAVITAVVVTVFGGLTLILRDDTFVKMKPTILYGLFASILAYGLLRGRSYLKYLMDELIPMREEGWMKFTRRFVGFYLLLAVVNEVVWRGFGTDVWVNFRTFVLPWPISAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG2</accession>
    <name>A0A2M9PCG2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000539">
        <property type="protein sequence ID" value="PJN95237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045389">
        <property type="entry name" value="DUF6522"/>
    </dbReference>
    <dbReference type="Pfam" id="PF20132">
        <property type="entry name" value="DUF6522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11198" checksum="3460051ECCDFDC5D" modified="2018-04-25" version="1">MDRRASISASGFELDAAIVAAVFRISPEEIMSRIRDGKLTTQCEKGIDEDQGRHRLTFFLASRQARFVIDDNGTVLYSFCVDFGDRPLPRRRGATAGKASS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCY8</accession>
    <name>A0A2M9PCY8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S8</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">rpsH</name>
        <name evidence="7" type="ORF">CNY89_08800</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="5">Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5 6">Belongs to the universal ribosomal protein uS8 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000475">
        <property type="protein sequence ID" value="PJN95384.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01302_B">
        <property type="entry name" value="Ribosomal_S8_B"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000630">
        <property type="entry name" value="Ribosomal_S8"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035987">
        <property type="entry name" value="Ribosomal_S8_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11758">
        <property type="entry name" value="PTHR11758"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00410">
        <property type="entry name" value="Ribosomal_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56047">
        <property type="entry name" value="SSF56047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00053">
        <property type="entry name" value="RIBOSOMAL_S8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 5 6" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="3 5 6" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="5" id="KW-0699">rRNA-binding</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006471"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01302"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU003660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95384.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="130" mass="14480" checksum="C99FD1A790E3F43C" modified="2018-04-25" version="1">MNDPLGDMLTRIRNAQMRHKSTVRTPASKIRKWVLDVLQAEGYIRGYESATSANNLPEFEISLKYFDGQPVIRELRRISTPGRRVYTGVKEMPQVRQGLGVAIVSTPRGVMSDAQARSANVGGEVLCTVF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD02</accession>
    <name>A0A2M9PD02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="12">Sulfate ABC transporter permease subunit CysW</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="12" type="primary">cysW</name>
        <name evidence="12" type="ORF">CNY89_08660</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane.</text>
    </comment>
    <comment type="subunit">
        <text evidence="3">The complex is composed of two ATP-binding proteins (CysA), two transmembrane proteins (CysT and CysW) and a solute-binding protein (CysP).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000463">
        <property type="protein sequence ID" value="PJN95410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015419">
        <property type="term" value="F:ABC-type sulfate transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011866">
        <property type="entry name" value="CysW_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005667">
        <property type="entry name" value="Sulph_transpt2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406">
        <property type="entry name" value="PTHR30406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30406:SF1">
        <property type="entry name" value="PTHR30406:SF1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00969">
        <property type="entry name" value="3a0106s02"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02140">
        <property type="entry name" value="permease_CysW"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0764">Sulfate transport</keyword>
    <keyword evidence="5 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="4" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="32"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="75"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="113"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="151"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="258"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="11">
        <location>
            <begin position="78"/>
            <end position="279"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011779"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00025323"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="298" mass="31493" checksum="D5099AD5C8F67049" modified="2018-04-25" version="1">MVSVPLDIPGTQAGRREASAVAATSDPAWVRILLTATVLVILGMLVAAPLAVVFLEALKSGASAALASFDEPDAWAAVRLTLLTALISVPLNAIFGLAAAWSIAKFDFPGKAFVITLIDLPFSVSPVVAGLCLVLLFGANSLVGGWLVAQGLPIVFAIPGIVLATMFVTFPFVARELIPVMQEQGRAEEEAALTLGASGWRTFFTVSLPNVKWALLYGVLLANARAMGEFGAVSVVSGKIRGETNTMPLMIEALYNEYMSVAAFSMAALLALLALFTLVLKSALEWRYADQLAASRRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDF0</accession>
    <name>A0A2M9PDF0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4 9">DNA polymerase I</fullName>
            <ecNumber evidence="3 9">2.7.7.7</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">polA</name>
        <name evidence="12" type="ORF">CNY89_07850</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="8 9">
            <text>a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) = diphosphate + DNA(n+1)</text>
            <dbReference type="Rhea" id="RHEA:22508"/>
            <dbReference type="Rhea" id="RHEA-COMP:17339"/>
            <dbReference type="Rhea" id="RHEA-COMP:17340"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:61560"/>
            <dbReference type="ChEBI" id="CHEBI:173112"/>
            <dbReference type="EC" id="2.7.7.7"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="2">Single-chain monomer with multiple functions.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 9">Belongs to the DNA polymerase type-A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.7.7" evidence="3 9"/>
    <dbReference type="EMBL" id="PHNO01000407">
        <property type="protein sequence ID" value="PJN95544.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003887">
        <property type="term" value="F:DNA-directed DNA polymerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006281">
        <property type="term" value="P:DNA repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006261">
        <property type="term" value="P:DNA-templated DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002562">
        <property type="entry name" value="3'-5'_exonuclease_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019760">
        <property type="entry name" value="DNA-dir_DNA_pol_A_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001098">
        <property type="entry name" value="DNA-dir_DNA_pol_A_palm_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043502">
        <property type="entry name" value="DNA/RNA_pol_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018320">
        <property type="entry name" value="DNA_polymerase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002298">
        <property type="entry name" value="DNA_polymerase_A"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10133">
        <property type="entry name" value="PTHR10133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00476">
        <property type="entry name" value="DNA_pol_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01612">
        <property type="entry name" value="DNA_pol_A_exo1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00868">
        <property type="entry name" value="DNAPOLI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00474">
        <property type="entry name" value="35EXOc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00482">
        <property type="entry name" value="POLAc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56672">
        <property type="entry name" value="SSF56672"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00593">
        <property type="entry name" value="pola"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00447">
        <property type="entry name" value="DNA_POLYMERASE_A"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9" id="KW-0227">DNA damage</keyword>
    <keyword evidence="9" id="KW-0234">DNA repair</keyword>
    <keyword evidence="9" id="KW-0235">DNA replication</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-0239">DNA-directed DNA polymerase</keyword>
    <keyword evidence="7" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-0540">Nuclease</keyword>
    <keyword evidence="9" id="KW-0548">Nucleotidyltransferase</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="3'-5' exonuclease" evidence="10">
        <location>
            <begin position="21"/>
            <end position="216"/>
        </location>
    </feature>
    <feature type="domain" description="POLAc" evidence="11">
        <location>
            <begin position="385"/>
            <end position="588"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="12">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007705"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012417"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00020311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00024632"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU004460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00474"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="SMART" id="SM00482"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN95544.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="628" mass="67956" checksum="3ACC3E7CFCABF2DF" modified="2018-04-25" version="1" fragment="single">EGAGAIEPVDPVLPPIDRALYETVRDEAALLAWVERIREAGAVAVDTETTSLGEMRAELVGVSLCTGPGVAAYVPLGHVSGSGDLFGGSARAEGQIAPERALAILKPVLEDPSILKIGQNLKYDYKILARHGVRVAPFDDTMLISYVQHAGLHGHGMDALAETYLGHDCIPIKSLLGGGKSARTFDKVPIEEAAPYAAEDAEVTWRLWRVLKPRLPYARVTRVYETMERPIVPVLAEMEMHGIRVDRGRLSRLSGDFAQKMAGLEDEIHRLAGGKFNVGSPKQLGEVLFDQMGLQGGKKGKTGAYATGADVLEELAAQGHELPARVLDWRLLSKLKSTYTDTLQTAINPETGRVHTSYSIAGAATGRLASTDPNLQNIPIRSEAGRQIREAFVAEPGNVLLSLDYSQIELRILAHIADIPALKEAFREGIDIHALTASQMFGVPVEGMDPMIRRQAKAINFGVIYGISAFGLANNLRIPREDAKRFIDTYFERFPGIQAYMAATRDFAKAQGHVETLFGRRIHTPEINSKGPSAAFAYRAAINAPIQGTAADIIRRAMIRVPEAIRGLPARMLLQVHDELVFEVAEEAVEETTARVRAVMEGAAMPVVDLSVPLVVDAGSGASWAAAH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI4</accession>
    <name>A0A2M9PDI4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">2-deoxy-D-gluconate 3-dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">kduD</name>
        <name evidence="1" type="ORF">CNY89_07455</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000377">
        <property type="protein sequence ID" value="PJN95611.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008678">
        <property type="term" value="F:2-deoxy-D-gluconate 3-dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051287">
        <property type="term" value="F:NAD binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011286">
        <property type="entry name" value="2-deoxy-D-gluc_3_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020904">
        <property type="entry name" value="Sc_DH/Rdtase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002347">
        <property type="entry name" value="SDR_fam"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00081">
        <property type="entry name" value="GDHRDH"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00080">
        <property type="entry name" value="SDRFAMILY"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01832">
        <property type="entry name" value="kduD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00061">
        <property type="entry name" value="ADH_SHORT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95611.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="251" mass="26076" checksum="B8461FA3BBA4C3F4" modified="2018-04-25" version="1">MPSAFDLTGRWAVVTGANTGIGQGLAVALAGAGAGIVAVGRSGMEETEALVAPTGAPFHAIRADLGRMAALEPVIAEAEEVSGGIEILVNNAGIIRRADSIDFTEADWDDVVDLNLKSAFFLTQAAARRMIPRGRGKIINIASLLSFQGGIRVPSYTASKSGLAGLTRLLACEWGARGVNVNAIAPGYFATNNTTALRDDEKRNSEILGRIPAGRWGRPEDLGGAAVFLASPAADYVHGIVLPVDGGWLAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM5</accession>
    <name>A0A2M9PDM5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07170</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000358">
        <property type="protein sequence ID" value="PJN95655.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="50"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95655.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5431" checksum="2530EF9D34C5BA28" modified="2018-04-25" version="1" fragment="single">MSLWRYANPAEFMRVSGAVLPALWGLTALALGAGLVWGFFLTPDDYEQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE62</accession>
    <name>A0A2M9PE62_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Type II toxin-antitoxin system death-on-curing family toxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06410</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000303">
        <property type="protein sequence ID" value="PJN95794.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003812">
        <property type="entry name" value="Fido"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02661">
        <property type="entry name" value="Fic"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Fido" evidence="1">
        <location>
            <begin position="9"/>
            <end position="43"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02661"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95794.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9351" checksum="A50D7257873D3C6B" modified="2018-04-25" version="1">MCAPPCSGHRRPIASKAAAILYGRVARHGFVDGDKRTGWILARRLFGRSGHRPHSPPGSPLHDLANGEIPFDALAAWFRERLVRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEB6</accession>
    <name>A0A2M9PEB6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000271">
        <property type="protein sequence ID" value="PJN95886.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018666">
        <property type="entry name" value="DUF2125"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09898">
        <property type="entry name" value="DUF2125"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="207"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="229"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="265"/>
            <end position="285"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95886.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="355" mass="38470" checksum="D96DA730FBA524D7" modified="2018-04-25" version="1" fragment="single">MRIILAIVTLAVVGWTGWWFLIAAAKERAIEAWLAARREVGWVAEASVVSVGGFPYRIDTTLTGLELSNPQGGWSWTAPDFQLLTLAYQPNHMIAVWPKEQTFASLVGRARVLSQDMRGSVIVEPNLQFGLRRSTIELTGVRIVGETMPWEVSLAHGILALRQAEGESPPPNAYDVAFTAETLALPKEWLAFDGAGVLDQAIQLASGPGDGGVRPAARPAGGRGDAAAGPAADRRRHDLHLGSARPARQGRAEGRRRGFRRRHDRPARAQLARDGRGRRNFRGDQLQPRRGAARGFGPDRALRRRSERDRGPAGVLLRLHAAGADPGRAGPAVRAAVIRLRLPRVRHPGAPPVGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEG2</accession>
    <name>A0A2M9PEG2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05530</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell inner membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000251">
        <property type="protein sequence ID" value="PJN95940.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006648">
        <property type="entry name" value="DrrB"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00164">
        <property type="entry name" value="ABC2TRNSPORT"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="24"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="57"/>
            <end position="80"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="100"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="135"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="199"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="253"/>
            <end position="274"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="6"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95940.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="283" mass="30071" checksum="1BC174F371EF0B48" modified="2018-04-25" version="1" fragment="single">LDPGVIAAFWRRELLRAGRDRSQLFGALSRTVLWLVILGFGLGATLREIEGYTYAQYILPGVVTLNVLFASLQSAIALVWDRQVGLFREVLVSPAPMTSVALGKICGGATVATIQGAIPLAFAPLIGLRLGPLDVALAFGVMFVMGMTITAAGVVIACRMTTFEGFGAISNGIIQPLYFLSGAIFPLKGIVGGVGFLDLPEGLRAELRRHGVYAIGGGWVVELPDWLKLLVHLNPVSYLLDLLRFVTLGFSQMPMAANLAALALLPLAAVALAARGMARLRQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN9</accession>
    <name>A0A2M9PEN9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_05175</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000232">
        <property type="protein sequence ID" value="PJN95993.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95993.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10773" checksum="FF9E22C11166FF92" modified="2018-04-25" version="1">MPIGLLGDFNVERAMQPELIELEEMLLRMGPLARRAPTEWERRFARSILRNAKRPAWRPSEKQQRVMRRMIAALFEGNEAPVLFEVEEVGAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF77</accession>
    <name>A0A2M9PF77_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000170">
        <property type="protein sequence ID" value="PJN96189.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000600">
        <property type="entry name" value="ROK"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR18964">
        <property type="entry name" value="PTHR18964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00480">
        <property type="entry name" value="ROK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96189.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="250" mass="26804" checksum="9556D6D54CB5F26B" modified="2018-04-25" version="1" fragment="single">CPPSFVASRLSIGVGSRRTPRRARSGAGSGFGQVAAGGARPAACPATYWWSDFAVITIEHGLGMGLVMNHRLYRGAAGVGMELAHTKVQLDGALCRCGQRGCLEAYVADYALAREATTALNRLHREGQTMPESMPELLESLYDHAKSGNQAARSIFRRAGRYLALGLANVVNLFDPPHIIIAGARMRFDYLYAPDTLAEMQTMVLETGRPLPPVEINAWGEMLWAHGAAALALQAVTDGLLAPGREMAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFA2</accession>
    <name>A0A2M9PFA2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF2155 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03840</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000162">
        <property type="protein sequence ID" value="PJN96223.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019225">
        <property type="entry name" value="DUF2155"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09923">
        <property type="entry name" value="DUF2155"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014637789" evidence="1">
        <location>
            <begin position="20"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96223.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="14341" checksum="7A7A675AE076A3A8" modified="2018-04-25" version="1">MIRAAFLLAFELAAAQAVAAQAPSETGQIVNSQDTVAMRQVTLRALDTLNGLTETLTLGVGETIRFGHLDITLEACRVPRDDPESDAYAFLRIQDIRDAAPRFSGWMFASSPALSALDHPRYDVWALSCSNS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFB4</accession>
    <name>A0A2M9PFB4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Isoleucine--tRNA ligase</fullName>
            <ecNumber evidence="9">6.1.1.5</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Isoleucyl-tRNA synthetase</fullName>
            <shortName evidence="9">IleRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">ileS</name>
        <name evidence="13" type="ORF">CNY89_03760</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="8 9">Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile)</text>
            <dbReference type="Rhea" id="RHEA:11060"/>
            <dbReference type="Rhea" id="RHEA-COMP:9666"/>
            <dbReference type="Rhea" id="RHEA-COMP:9695"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:58045"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78528"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.5"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="9">Monomer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="domain">
        <text evidence="9">IleRS has two distinct active sites: one for aminoacylation and one for editing. The misactivated valine is translocated from the active site to the editing site, which sterically excludes the correctly activated isoleucine. The single editing site contains two valyl binding pockets, one specific for each substrate (Val-AMP or Val-tRNA(Ile)).</text>
    </comment>
    <comment type="similarity">
        <text evidence="9">Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.5" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000158">
        <property type="protein sequence ID" value="PJN96237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0002161">
        <property type="term" value="F:aminoacyl-tRNA editing activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004822">
        <property type="term" value="F:isoleucine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000049">
        <property type="term" value="F:tRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006428">
        <property type="term" value="P:isoleucyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd07960">
        <property type="entry name" value="Anticodon_Ia_Ile_BEm"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.740.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02002">
        <property type="entry name" value="Ile_tRNA_synth_type1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001412">
        <property type="entry name" value="aa-tRNA-synth_I_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002300">
        <property type="entry name" value="aa-tRNA-synth_Ia"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033708">
        <property type="entry name" value="Anticodon_Ile_BEm"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002301">
        <property type="entry name" value="Ile-tRNA-ligase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023585">
        <property type="entry name" value="Ile-tRNA-ligase_type1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013155">
        <property type="entry name" value="M/V/L/I-tRNA-synth_anticd-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009080">
        <property type="entry name" value="tRNAsynth_Ia_anticodon-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009008">
        <property type="entry name" value="Val/Leu/Ile-tRNA-synth_edit"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08264">
        <property type="entry name" value="Anticodon_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00133">
        <property type="entry name" value="tRNA-synt_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00984">
        <property type="entry name" value="TRNASYNTHILE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47323">
        <property type="entry name" value="SSF47323"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50677">
        <property type="entry name" value="SSF50677"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00392">
        <property type="entry name" value="ileS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00178">
        <property type="entry name" value="AA_TRNA_LIGASE_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 9 10" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="5 9 10" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2 9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="4 9 10" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 9 10" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="tRNA-synt_1" evidence="11">
        <location>
            <begin position="38"/>
            <end position="680"/>
        </location>
    </feature>
    <feature type="domain" description="Anticodon_1" evidence="12">
        <location>
            <begin position="724"/>
            <end position="872"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'HIGH' region" evidence="9">
        <location>
            <begin position="68"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="short sequence motif" description="'KMSKS' region" evidence="9">
        <location>
            <begin position="642"/>
            <end position="646"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="601"/>
        </location>
        <ligand>
            <name>L-isoleucyl-5'-AMP</name>
            <dbReference type="ChEBI" id="CHEBI:178002"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="645"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00025217"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_02002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="RuleBase" id="RU363035"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF00133"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="Pfam" id="PF08264"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="936" mass="105012" checksum="193B75FA7A3F5F78" modified="2018-04-25" version="1">MCADTPDQFDTPDYKDTLFLPKTDFPMRAGLPAREPGWLARWERIGVYDRLREKAAGRTPFVLHDGPPYANGNLHIGHALNKILKDFIVRSQQMMGRDSRYVPGWDCHGLPIEWKIEEQYRARGKSKDAVPVAELRAECRKFAEHWVGVQRAEFKRLGVTGDWEDPYLTMDFHAEAVIADEFMKFVMNESLYLGSKPVMWSAVEKTALAEAEVEYKDHQSHTIWVKFPVVSGPEALKGASVVIWTTTPWTIPSNRGVAYSGRISYGLYRATEAAADNWVLPGDLLVLADPLAAGVMGSARVERYERVGDAPDFAGVVLRHPLAGTEAYWDYEVPMLEGDFVTDDAGTGFVHMAPSHGLDDYELFVKNGLVDRMTHNVLEDSAFAPHVPFFAGKQIFDAKGKEGPANKAVIEKLIEAGGLAARGRVKHSYPHSWRSKAPVIYRNTPQWFVAIDKPLHDGLGAHGDTIRERALTSIERLVQWTPITGRNRLHSMVGSRPDWVLSRQRAWGVPLTCFVRRLGEGRVEILRDAEVNARIKDAFETEGADAWYAEGARERFLGSLANEPWEQVTDILDVWFDSGSTHAFALRDRPDGVWPADLYLEGTDQHRGWFQSSLLQACGTRGRAPYKAVLTHGFTLDENGMKMSKSVGNTVAPEEVIRQYGADILRLWVAQSDYTADLRIGPEILKGCADGYRRLRNTLRFLLGALDGFQPSEKMGLDEMPELDRWVLHRLAELDQEVREGYAKYDFQGLFQTLFQFATVDLSAFYFDIRKDALYCDAADSPRRRAARTVMDALFARLVTWLAPILPFTMEEVWLERCPGDDASVHLVDFPATPSAWLDPALGSKWEYVRRARRVVTGALEIERREKRIGASLEAAPELYVSEKELLDALKGVDMADVCITSALMITETPAPRDAFRLEDAPGVAVVPAMAGGCKC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG4</accession>
    <name>A0A2M9PFG4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">HAGH_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03600</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000149">
        <property type="protein sequence ID" value="PJN96262.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.15.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032282">
        <property type="entry name" value="HAGH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036866">
        <property type="entry name" value="RibonucZ/Hydroxyglut_hydro"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16123">
        <property type="entry name" value="HAGH_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56281">
        <property type="entry name" value="SSF56281"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="HAGH_C" evidence="4">
        <location>
            <begin position="37"/>
            <end position="120"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF16123"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96262.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="120" mass="13193" checksum="B3B12E025067AF46" modified="2018-04-25" version="1">MVMGCGRLFEGSPAQMWETLERLSALPGETLLHSGHEYALSNIRFALSVDPQNAELRRRAVETQALRAAGRPSVPARLDHERATNPFLRAGDPAIKAGLGLNDAPDVAVFTELRRRKDAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG8</accession>
    <name>A0A2M9PFG8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03590</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000148">
        <property type="protein sequence ID" value="PJN96268.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007154">
        <property type="term" value="P:cell communication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.2030">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038081">
        <property type="entry name" value="CalX-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003644">
        <property type="entry name" value="Calx_beta"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03160">
        <property type="entry name" value="Calx-beta"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="4"/>
    </dbReference>
    <dbReference type="SMART" id="SM00237">
        <property type="entry name" value="Calx_beta"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141072">
        <property type="entry name" value="SSF141072"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="4"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0677">Repeat</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="domain" description="Calx-beta" evidence="4">
        <location>
            <begin position="14"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="domain" description="Calx-beta" evidence="4">
        <location>
            <begin position="123"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="domain" description="Calx-beta" evidence="4">
        <location>
            <begin position="241"/>
            <end position="340"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="SMART" id="SM00237"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96268.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="729" mass="75049" checksum="D93B69C8B9F41D45" modified="2018-04-25" version="1">MADRPGQAGEEGAPKVQRPERNEGPAHLAVSAPYVVEGAGNDAVFTVSLSEAFATPRSFTYSTFDGTAVAGEDYLARTGTVTFAAGQTEAVVAVDLLNDAAVEDAETFGLRINGANNVGGAVGTAHILNDDGRRPVISVEGAGQREGDYIAFTVRLSAVAADAVTVDYRTLSGSATVESDVRSWSSNQLAGTLTFAPGEQVKTVYALVSNDAEDEIDENVLLELSNPSRALFAEGARSVSAIGWALDDDGVGVNRSVAVSNPVVYEGNQAVFTVELSQASTTPVTLGYQTSSGSARAGADFLSQSGNLTFAVGQTRAYVTVDLLSDRVRETSETFNLAITSYPSQISIRSGDVSGLATIVDGTIRGTSGADTLSGTEAVDRIEGLAGDDVLRGYGGDDFLLGDAGDDVLNGGAGNDRMAGGTGDDTYIVSEWRDTVEEARGEGVDTVRSSINGSLGANVENLILSGRDDIDGTGNGLANRITGNGGDNTLSGASGRDLLYGEAGADRLIGGTGNDLLDGGSGSDRMSGGTGDDVYVVDRSGDVLYEARGAGTDTVRSATHWTLGANFENLTLTGRRDIDGTGNGLANRIVGNSGDNLLSGGAGADTISGGSGDDSIVGGAQADRMTGGAGADRFVFLSDGDTGLRQWRDVITDFAPRTDKLVLSAIDANEIRSGNQAFDFIGRADFSRTAGELRFSNEILSADTDGDGVSDFQIELAGLSRIYSADVIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT0</accession>
    <name>A0A2M9PFT0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02785</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000108">
        <property type="protein sequence ID" value="PJN96401.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="38"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96401.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8309" checksum="4BF9A0B2BD82BC11" modified="2018-04-25" version="1" fragment="single">YLAGALVLNALFLRGAWRIRGRDEATAAADRHRVEKKFFGFSILYLFLMFGLFLVEAALRAVHLTLPAWPVLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFT3</accession>
    <name>A0A2M9PFT3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">RIP metalloprotease RseP</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_02710</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the peptidase M50B family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000105">
        <property type="protein sequence ID" value="PJN96410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004222">
        <property type="term" value="F:metalloendopeptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004387">
        <property type="entry name" value="Pept_M50_Zn"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008915">
        <property type="entry name" value="Peptidase_M50"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42837">
        <property type="entry name" value="PTHR42837"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02163">
        <property type="entry name" value="Peptidase_M50"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="8 9" id="KW-0472">Membrane</keyword>
    <keyword evidence="11" id="KW-0482">Metalloprotease</keyword>
    <keyword evidence="11" id="KW-0645">Protease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 9" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0862">Zinc</keyword>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="56"/>
            <end position="76"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="9">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="domain" description="Peptidase_M50" evidence="10">
        <location>
            <begin position="6"/>
            <end position="118"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="11">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF02163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="132" mass="13614" checksum="7FE0227AF045CB84" modified="2018-04-25" version="1" fragment="single">PAPWTALGLGAARVGDVIVQSLNGLRHILTGAIGAENLQGPIGIAQVSGETASQGLGSFITLIAVISTAIGLLNLFPIPVLDGGHVVAFVVEAVRGRPPSERALQFAMSIGLGLILLLMVFATYNDIMRMVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX4</accession>
    <name>A0A2M9PFX4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH cro/C1-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02945</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000115">
        <property type="protein sequence ID" value="PJN96374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00093">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12844">
        <property type="entry name" value="HTH_19"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00530">
        <property type="entry name" value="HTH_XRE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="2">
        <location>
            <begin position="13"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="363"/>
            <end position="388"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="388"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="388" mass="42197" checksum="3AAEF0702C91406E" modified="2018-04-25" version="1" fragment="single">MAEARKLYAGVKLREIRGRIGLTQAEYASKLGISLSYLNQMENNHRPLSARVMLALAQEFGLDVTELAAGSAERTVADMREALADPVFGATPLPLADLQLVASNAPNLARAFLGLYRAHRETQERLDQLNDALGLEERPLQPLPWEEVRDFFHYCDNYIDPIDRAPSISARDPFGRLRAVVPGEFAEHLSIRSVRRPSPLGGRAQAQVVLLADDLLGRIQRRLVEVVRGVDQGGQEHFPRQVQAFVGAPHRRLDAGIGAGVQHVLDAGDVVALDQVVADHQHPRQHDRFRAPGLDRVAPLHLGLETLHRREDGVAGLRAVLGLGDAAEGLDRILVGVDPEAGLAEGPPVLVDLLDPVLADQDRRADREAQPGEGLAGGAPGLGVEQRH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX9</accession>
    <name>A0A2M9PFX9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ASCH domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96422.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007374">
        <property type="entry name" value="ASCH_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015947">
        <property type="entry name" value="PUA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04266">
        <property type="entry name" value="ASCH"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88697">
        <property type="entry name" value="SSF88697"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ASCH" evidence="1">
        <location>
            <begin position="9"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF04266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96422.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="144" mass="16121" checksum="CA2F840A674A952F" modified="2018-04-25" version="1">MTQLPKLALSIRQPWAWAIINAGKDIENRDWSTRFRGPVCIHAAKGMTNREWDDAMDFIDQAFPVPLAHQYGRRRSASGSTDAKRGGIIGVAEIVDCVEASSSPWFFGRYGFVLANVQPVEFIPVRGALGFFDWRRNLSPEVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGA9</accession>
    <name>A0A2M9PGA9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NADH-quinone oxidoreductase subunit J</fullName>
            <ecNumber evidence="1">7.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01690</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a quinone + 5 H(+)(in) + NADH = a quinol + 4 H(+)(out) + NAD(+)</text>
            <dbReference type="Rhea" id="RHEA:57888"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:24646"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="ChEBI" id="CHEBI:132124"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the complex I subunit 6 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="7.1.1.-" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000061">
        <property type="protein sequence ID" value="PJN96583.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008137">
        <property type="term" value="F:NADH dehydrogenase (ubiquinone) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0048038">
        <property type="term" value="F:quinone binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.120.1200">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001457">
        <property type="entry name" value="NADH_UbQ/plastoQ_OxRdtase_su6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042106">
        <property type="entry name" value="Nuo/plastoQ_OxRdtase_6_NuoJ"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00499">
        <property type="entry name" value="Oxidored_q3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="1" id="KW-0520">NAD</keyword>
    <keyword evidence="1" id="KW-0874">Quinone</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="6"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="30"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="89"/>
            <end position="111"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="147"/>
            <end position="168"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="RuleBase" id="RU004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96583.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="202" mass="21804" checksum="E1FFC5EC15113677" modified="2018-04-25" version="1">MATFAFYLFAIVAVVSGIRVVFARSPVHSVLWLILAFFAAAGLFVLLGAEFVAMLMLIVYVGAVAVLFLFVVMMLDVDFAALREGMASYLPVGLLIGVVLLVQLGFAFGAWETSDIALAQRAAITPPVAETENTAALGMLIYTKYVFLFQAAGLVLLVAMIGAIVLTLRKRKDVKRQNVLTQMYRDPAAAVELKDIKPGQGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGC2</accession>
    <name>A0A2M9PGC2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_01670</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000060">
        <property type="protein sequence ID" value="PJN96589.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01392">
        <property type="entry name" value="HTH_LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001387">
        <property type="entry name" value="Cro/C1-type_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000843">
        <property type="entry name" value="HTH_LacI"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00356">
        <property type="entry name" value="LacI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00036">
        <property type="entry name" value="HTHLACI"/>
    </dbReference>
    <dbReference type="SMART" id="SM00354">
        <property type="entry name" value="HTH_LACI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47413">
        <property type="entry name" value="SSF47413"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50943">
        <property type="entry name" value="HTH_CROC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50932">
        <property type="entry name" value="HTH_LACI_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH cro/C1-type" evidence="5">
        <location>
            <begin position="24"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="domain" description="HTH lacI-type" evidence="4">
        <location>
            <begin position="26"/>
            <end position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50932"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="PROSITE" id="PS50943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96589.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="354" mass="38179" checksum="650AC0806FAE0F99" modified="2018-04-25" version="1">MGRLIGVAARTVTGGGELSRIAGKGVTIRDVARRAGVSVATVSNVLNGQKKVRSASYERVTEAARELNYRADPAAAWLRSGRSRVIATLSPNLENPFFAGMVAAVERLCHEQGYELFLASSDNKPDVETARMRSLLQWRPAAFFVIPCVETLPLLDEVAEAGVPVVIADRVLTDRDCDFIELDNHQAGALAAEHLIALGHRHIVVIAPSFSVINVHERFEGVASALKAVGGPPPVPFETQHLRDEAEPLTLQPGQLGAATAVIALTNFTTLQLLGGLARIGLRVPRDISLVGFDDTAWMNVASPSVTAIRQPVAQMGKAVWDRLYARIKGREDPPCHQKYPGELIIRESTAPLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD8</accession>
    <name>A0A2M9PGD8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_01610</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000058">
        <property type="protein sequence ID" value="PJN96596.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="34"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="205"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="234"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="290"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="342"/>
            <end position="364"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="384"/>
            <end position="407"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="199"/>
            <end position="407"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96596.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="419" mass="45120" checksum="59006A24E36F48DC" modified="2018-04-25" version="1">MAQLTATSPGLTAADGVPLKTALARAQRRVQRRALLLVAPLLLFVLATFVIPIGQLLYRSVWNPGFSDNMPAVSAWFEANPPGTQPDEAAFAALVADLVAASEARTIGVVGTRINYDMPGTRSLFTSAARRADEADAAVPRGLTALDDGLAQPELWAVMRASASAHTPNFYVAALDRKLDETGSIVRVPPGERVYVPLFWKTMGLSAAIAAICLVVAFPVAHLLATLPLRQSNILMVMVLLPFWTSLLVRTTAWIAILQSQGVVNNALVAMGVVSDANRIPMMYNQTGTIIAMTHILLPFMILPMYSVMRTIKPTYVRAARSLGASSWTAFRRVYLPQTLPGMGAGVLLVFILAVGYYITPALVGGASGQLFSNMIAFHMQRSLNWSLAAALAAILLGAVLLLYWLYDRLVGIDNMKLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGG4</accession>
    <name>A0A2M9PGG4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="16">Glutamate synthase large subunit</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="16" type="ORF">CNY89_01420</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[3Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:21137"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="14">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the glutamate synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000049">
        <property type="protein sequence ID" value="PJN96630.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00705"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051538">
        <property type="term" value="F:3 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015930">
        <property type="term" value="F:glutamate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006537">
        <property type="term" value="P:glutamate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00982">
        <property type="entry name" value="gltB_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd02808">
        <property type="entry name" value="GltS_FMN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017932">
        <property type="entry name" value="GATase_2_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002489">
        <property type="entry name" value="Glu_synth_asu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036485">
        <property type="entry name" value="Glu_synth_asu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006982">
        <property type="entry name" value="Glu_synth_centr_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002932">
        <property type="entry name" value="Glu_synthdom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029055">
        <property type="entry name" value="Ntn_hydrolases_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00310">
        <property type="entry name" value="GATase_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04898">
        <property type="entry name" value="Glu_syn_central"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01645">
        <property type="entry name" value="Glu_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01493">
        <property type="entry name" value="GXGXG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56235">
        <property type="entry name" value="SSF56235"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF69336">
        <property type="entry name" value="SSF69336"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51278">
        <property type="entry name" value="GATASE_TYPE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="13" id="KW-0003">3Fe-4S</keyword>
    <keyword evidence="4" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="5" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="6" id="KW-0288">FMN</keyword>
    <keyword evidence="12" id="KW-0314">Glutamate biosynthesis</keyword>
    <keyword evidence="8" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutamine amidotransferase type-2" evidence="15">
        <location>
            <begin position="34"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001927"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022643"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS51278"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN96630.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="1506" mass="162596" checksum="5C0CE8BC2947B6C0" modified="2018-04-25" version="1">MTTYDSAWVRAQEAELERLAAEGMYRAEDERDACGVGFVVALDGKPNRAVVAAGIRALSAIWHRGAVDADGKTGDGAGIHVQIPKAFFEEQVRRTGHTPRGEKLAVGQIFLPRNDFGAQEAARTIVETEVLRMGHYIYGWRHVPVDISCLGEKANATRPEIEQILISNAKGVDEETFERELYVIRRRIEKAGAGIRDFYICSMSCRSLIYKGMMLAEDVSVFYPDLKDERFESAFAIYHQRYSTNTFPRWWLAQPFRMLAHNGEINTLKGNLNWMRSHEIRMSSDYFGELAEDIKPIVQPNGSDSAALDNVFEVLVRAGRTAPMAKTMLVPEAWSKVATKMSDAWVAMYAYSNAVMEPWDGPAALAMTDGRWVCGGLDRNGLRPMRYVVTGEGLLIAGSEAGMVPADEMTVVEKGALGPGQMIGVDMATGTLYHDSELKDLLAASSPFDQWVGSITDIEDLAKVEEEAPVFTGGDLRRRQVAAGYTVEELEVIVHAMAEDGKEAIGSMGDDTPPAVLSDKYRPLSHYFRQNFSQVTNPPIDSLREHRVMSLKTRFGNLKNVLDQDNSQTQILQLETPFVSNAQFAAMKTGFGESVGEIDCTFPAGAEHGLAEGLARIRAEAEEAVRAGANHVVLSDMGQGPGRVAMPMILATSAVHSWLTRKGLRTFTSLNVRAAECIDPHYFAVLIGCGATTVNAYLAEDSIADRISRGLIEGSLDEAVARYREAIGQGLLKIMAKMGISVISSYRGGLNFEAIGLSRALVAEYFPGMNSRISGIGVIGIQRQVEKAHARGFGNADSVLPIGGFYKARRSGETHAWEAQAMHMLQAATDRGDYKLWKQYSAAMQARPPIQLRDLLDFTPTKAPVALEAVESITAIRKRFVTPGMSLGALGPEAHKTLNIAMNRIGAKSDSGEGGEDPAHFLPMPNGDNASAKIKQVASGRFGVTAEYLNQCEELEIKVAQGAKPGEGGQLPGIKVTELIARLRHSTPGVTLISPPPHHDIYSIEDLAQLIYDLKQINPRAKVCVKLVSQSGVGTIAAGVAKAKADVILISGHNGGTGASPMTSIKYAGLPWEMGLSEAHQVLTINNLRDRVVLRTDGGLRTGRDIVMAAMLGAEEFGIGTAALIAMGCIMVRQCQSNTCPVGVCTQDPTLRAKFTGTADKVVNLISFYAEEVREVLASVGAKSISEVIGRSDLLTQVSRGAAHLDDLDLNPLLIRVDNGPVNYDRTKPRQVVPDTLDTQVVSDAEPFFKDGEKMQLSYAVQNTLRSIGTRVSSHIVKRFGMRNNLQPDHLTIKLAGSAGQSLGAFAAPGLKIEVSGEANDYVGKGLSGATIVVRPPLGSPLVPHQNAIIGNTVLYGATAGYLFASGRAGERFCVRNSGAQVVIEGCGSNGCEYMTGGLAVILGPVGDNFAAGMTGGMAFIYDLDGEAGLRLNGETVVSGPIRSAHWEGVLRDMVARHLAETGSPRAAEILRDWDQTLSRFLQIVPKEMLSRLSHPLTDAPEAATA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK5</accession>
    <name>A0A2M9PGK5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Succinyl-CoA--3-ketoacid-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01225</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000042">
        <property type="protein sequence ID" value="PJN96656.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008410">
        <property type="term" value="F:CoA-transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004165">
        <property type="entry name" value="CoA_trans_fam_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037171">
        <property type="entry name" value="NagB/RpiA_transferase-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR13707">
        <property type="entry name" value="PTHR13707"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF100950">
        <property type="entry name" value="SSF100950"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96656.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6220" checksum="87B0D6BE05B1EED5" modified="2018-04-25" version="1" fragment="single">ESKVLKACTLPLTGKAVVDRIITNLGVLDVVEGGLRIVELADGVTEEDLRKSTEATIVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM3</accession>
    <name>A0A2M9PGM3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">VOC family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01025</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000035">
        <property type="protein sequence ID" value="PJN96697.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06588">
        <property type="entry name" value="PhnB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028973">
        <property type="entry name" value="PhnB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06983">
        <property type="entry name" value="3-dmu-9_3-mt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3-dmu-9_3-mt" evidence="1">
        <location>
            <begin position="3"/>
            <end position="129"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96697.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="138" mass="15103" checksum="063ABDB2A46B2A22" modified="2018-04-25" version="1">MEVAPYLSFDGACVEAFDFYAETLGGKVEFRMTYGESPMAEHTPDSHKDRIMHSSLRIGERLILGADAPPQWFSKPQGFSVSINDPVTARMGAVFAKLAEGGTVMMPFAPTFWSEGFGMCIDKYGTPWIVNGAEKPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ5</accession>
    <name>A0A2M9PGQ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Phage major capsid protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000043">
        <property type="protein sequence ID" value="PJN96654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024455">
        <property type="entry name" value="Phage_capsid"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05065">
        <property type="entry name" value="Phage_capsid"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01554">
        <property type="entry name" value="major_cap_HK97"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="11"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="306" mass="32771" checksum="B2E2B6BD194EAAC4" modified="2018-04-25" version="1" fragment="single">MSDENDLKIATKALQQAADDVKKNAEKAEAEMKRLGNLTEETKKAADEALIKHNEIAARITEIEQKLVRNDGAPERPKSLGQQVTDSDEVQAFLKGSRKGSVSVKAIISSLTTDADGSAGDLIAPQRIQGIITPPQRRMTIRDLITPGRTSGPALQYFKETGFTNAAATVSETTGALKPQSDIKFDIVTTAVTTIAHWVLATKQILDDLPQLQSYIDGRLRYGLAYVEEGQLLNGGGTGTDLHGIYTQATAYAPPIAPTGAGVLTKIDVIRLAILQSVLAEYPANGIVLHPGDWADIELTKTDDGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW4</accession>
    <name>A0A2M9PGW4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Phage tail tape measure protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00605</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000018">
        <property type="protein sequence ID" value="PJN96771.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010090">
        <property type="entry name" value="Phage_tape_meas"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10145">
        <property type="entry name" value="PhageMin_Tail"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01760">
        <property type="entry name" value="tape_meas_TP901"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="377"/>
            <end position="401"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="407"/>
            <end position="430"/>
        </location>
    </feature>
    <feature type="domain" description="PhageMin_Tail" evidence="2">
        <location>
            <begin position="89"/>
            <end position="288"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10145"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96771.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="857" mass="88532" checksum="9355344C6EAC2390" modified="2018-04-25" version="1">MTAIVGALRVTLGLDSSDLMAGIASAQGDFKRFGTQMRDIGSDLSLRLSAPLAAIGTGVLALAGGFEAAMNRVEAATGASSDEMKAMSDLARDLGKSTTFSAGEAADAIEMLAKNGLNASQILGGALSASLDLAASGGADLASAADLTTDVLANFKKDVGDLKPVVNGVAGVLLQSKFGFEDYQLALAQAGGVAGGLGVTFEDFNAVIAVTSSSFASGSDAGTSFKTFLQRLVPASKGAAETMKQLGLEFFDSQGNMKDMAAIAQELQDGLSKLSDEAKTEALSTIFGSDAMRTAIGLMDQGAAGVQRLDAAIRSASATEQAEARTKGFLGALEQMKGAFEELALAIANSGLLEAATDTVKWLTDLVDKISEVDPELLRLGTIFAGVAAAVGPVLVGLGLFSAALAAISAPVLAAVAVVATLAAAALPLYQNWDKIRQQFPGIAGVVEGLGAAIGELAGGLAQSFKLMVQGIDQVLSGDLVAALRTGSEIIENFGRTVADTLLALIAMLPEKFAAVGRDIMAGLERGLKERWEAVKGWFGNLATSIEDWVRGPLDTHSPSRVFAEIGRDIMDGLGVGIDAKAGSVKQRLDDLAADMTGIFGAPEKKQFDTKTGEVDPAIAVTQGLELELALLSRTQLEREIVNQTRQAGVAILSEEGLKIADLVTKTAEMNAEMDRVGAVNGYLASTFSDLWSSAAQGAGDFKDALGDIAGELGKMALNEGFKTLFNGPLSAGGGGFFGGLGSLLSGVFGIGKVPAFANGTDFAPGGLAMVGERGRELLEVPRGSRVRSNTDTEALLRGAREREPLGVRVYVDDDDKLRAMVDRRAGQQVEARRGAIVGDSVQAVQQGRAMSSRFLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY5</accession>
    <name>A0A2M9PGY5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">C4-dicarboxylate ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00420</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000012">
        <property type="protein sequence ID" value="PJN96807.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030288">
        <property type="term" value="C:outer membrane-bounded periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071702">
        <property type="term" value="P:organic substance transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.170">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018389">
        <property type="entry name" value="DctP_fam"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004682">
        <property type="entry name" value="TRAP_DctP"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038404">
        <property type="entry name" value="TRAP_DctP_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33376">
        <property type="entry name" value="PTHR33376"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03480">
        <property type="entry name" value="DctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006470">
        <property type="entry name" value="DctB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00787">
        <property type="entry name" value="dctP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0574">Periplasm</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 6" id="KW-0732">Signal</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="signal peptide" evidence="6">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014767403" evidence="6">
        <location>
            <begin position="25"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009023"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96807.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="327" mass="35977" checksum="FD19B9B5E6881789" modified="2018-04-25" version="1">MTRRTLGALLASAAIALSVVSAQAQEITLRSSDTHPDGYPTVAAVQHMGELLKERSGGRIEVEVFHSAQLGEEKDTIEQTRFGVIDMNRVSLAPFNGLIPETAILSLPYLFRDVDHLHAVLDSEIGDEILAAFEPHGLIALAYFDPGARSFYNRVKPIKSIEDMKGMKFRVIQSDVFVDMVAALGANAVPMPYGEVYSGIETGVIDGAENNFPSYESSGHYEVAKYYTLDEHTMVPEVLVVSKATWDKLSPEDQALLRQAAKDSIAFNREKWAEREKQSEEQVRAAGVEIVTDIDKAPFIAAMGPVYEKYAATPELKALVEKIQATE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGZ8</accession>
    <name>A0A2M9PGZ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Propionyl-CoA synthetase</fullName>
            <ecNumber evidence="3">6.2.1.17</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="primary">prpE</name>
        <name evidence="3" type="synonym">yahU</name>
        <name evidence="3" type="ORF">CNY89_00380</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.2.1.17" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000011">
        <property type="protein sequence ID" value="PJN96810.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050218">
        <property type="term" value="F:propionate-CoA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032387">
        <property type="entry name" value="ACAS_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020845">
        <property type="entry name" value="AMP-binding_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF16177">
        <property type="entry name" value="ACAS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00455">
        <property type="entry name" value="AMP_BINDING"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACAS_N" evidence="2">
        <location>
            <begin position="3"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="63"/>
            <end position="263"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="266"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF16177"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96810.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="266" mass="28252" checksum="164C349E943EDC8E" modified="2018-04-25" version="1" fragment="single">MAYQEVYAGWKADPEAFWMEAAKAIDWMKPPSHALEASKAPLYGWYDDAVCNVCWNAVDRHVEAGHGDRTAIIYDSPITGAKGKTSFAELQAQTAALGGALQAQGVGKGDRVVIYMPMIPEALVAMLACARIGAVHSVVFGGFAAPELAVRIDDARPKAILAASCGLEPGRTIAYKPLVDAAIGMSDHKPDAVIVFQRDQLRAELNEERDLDWAEATAAATPADCVPVGGMDPLYILYTSGTTGQPKGVVRPSAGYMVALAWTMGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH08</accession>
    <name>A0A2M9PH08_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00230</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000006">
        <property type="protein sequence ID" value="PJN96838.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028081">
        <property type="entry name" value="Leu-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13458">
        <property type="entry name" value="Peripla_BP_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014857798" evidence="1">
        <location>
            <begin position="21"/>
            <end position="429"/>
        </location>
    </feature>
    <feature type="domain" description="Peripla_BP_6" evidence="2">
        <location>
            <begin position="23"/>
            <end position="386"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13458"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96838.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="429" mass="46777" checksum="B6E1E1B31DCB6262" modified="2018-04-25" version="1">MKPTLYAALAALLAASPALAELNFPSLSYRTGPYAAGGVPFADGYADYFTLLNERDGGIGGVKANVTECETAYDTTRGMECYEQLRTTQPLVLQPMSTGMVYQMIPRTIEDKLPLLTVGYGRTSAADGSTFQWTFNFPATYWDGASVAIKYLLDENGGSLEGKKIALVYHNSAYGKEPIRTLEELAKKHGFTLTTIPVDHPGQEQKSQWLQIRRERPDYVLMWGWGVMNQVAITEAANIGFPMDHFIGIWWAGAEPDVLPAGAGANGYKALSFNGVGDDFPFYADLRQYVIDAGKGKGDGTTVGTVQYNRGVLAAMMAAESARKAQEIHGTPDITPEMMRDGMEALTLDDARLEAIGMKGFAPDIAITCQNHRGVGYGLVTQWDASAKKWVQLTDFIAPDEEVVWPLIESDAASFRDESGMAQRDCPAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P474</accession>
    <name>A0A2M9P474_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30660</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004879">
        <property type="protein sequence ID" value="PJN92330.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92330.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7423" checksum="F680D8E7E9C56C3A" modified="2018-04-25" version="1" fragment="single">AKSIGENRELIELISSNPDNIDYGEMIHVDDGTEDGITTVTDRGVESLLEFLADVRTWEGGIRQFLA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F9</accession>
    <name>A0A2M9P4F9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">VapC toxin family PIN domain ribonuclease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29850</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004578">
        <property type="protein sequence ID" value="PJN92424.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92424.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7818" checksum="A9DCE24A0ABC2B3F" modified="2018-04-25" version="1" fragment="single">ARVATCPITENGVLRILGNPKYPNSPGSPAQVAGILRSLRALPGHEFWSEDFSVVADAQVDAARILTSAQVTDT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Q1</accession>
    <name>A0A2M9P4Q1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004330">
        <property type="protein sequence ID" value="PJN92499.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="80"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92499.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="9078" checksum="53314BF3CA2FEE76" modified="2018-04-25" version="1" fragment="single">NFDELRSDPQALLQRSARFLGLDDFTFEIRPPSNVRSAVNDSTSFRLPPVERAWVRAALAEDMGTLGRKYGFDVSGWGFR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S1</accession>
    <name>A0A2M9P4S1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HTH hxlR-type domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_28850</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004215">
        <property type="protein sequence ID" value="PJN92536.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="1">
        <location>
            <begin position="1"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92536.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8705" checksum="36072DDE6F369A03" modified="2018-04-25" version="1" fragment="single">QALEADGMVARRAFPVVPPHVEYSLTPLGAEAARAGPRAGVSERMLAQTLQALEADGMVARRAFPVVPPHVEYSLTPLGAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U3</accession>
    <name>A0A2M9P4U3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25365</name>
        <name evidence="1" type="ORF">CNY89_28530</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004096">
        <property type="protein sequence ID" value="PJN92574.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003098">
        <property type="protein sequence ID" value="PJN92919.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92574.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92919.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7129" checksum="4345F70126AF5F38" modified="2018-04-25" version="1" fragment="single">MTDLQKFFDAVRANPFGGKLLPGQVQGCEAILQASDRHGVTDERHVANILAQVHHETDGTMMPEV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5F6</accession>
    <name>A0A2M9P5F6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26780</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003536">
        <property type="protein sequence ID" value="PJN92767.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92767.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11770" checksum="B561AB3739D97CC4" modified="2018-04-25" version="1" fragment="single">MARRYQIVRHRTRVKNEVYSILAAHLVPKCPHADLFNQRGRAGWRGRWSRMTERAAIERNIRELDRLTEDQAGLDREIALSVMQDASVRRLMTITGVNLTV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5P3</accession>
    <name>A0A2M9P5P3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA gyrase subunit A</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25760</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003208">
        <property type="protein sequence ID" value="PJN92874.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003916">
        <property type="term" value="F:DNA topoisomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.120.10.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006691">
        <property type="entry name" value="GyrA/parC_rep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035516">
        <property type="entry name" value="Gyrase/topoIV_suA_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03989">
        <property type="entry name" value="DNA_gyraseA_C"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101904">
        <property type="entry name" value="SSF101904"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="32"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="114"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92874.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="114" mass="12495" checksum="D55C46CA90B61C72" modified="2018-04-25" version="1" fragment="single">ATKDEDFVTSLFVANTHTALLFFTTAGMVYTLKCWRLPLAGRNARGKAIVNLLPIPQGVGIAAIMPVDVPETEWATLQIMFATSDGDVRRNALDDFTNVMRNGKIAMKLPEGVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5V8</accession>
    <name>A0A2M9P5V8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_25555</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the Lgt family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003144">
        <property type="protein sequence ID" value="PJN92898.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008961">
        <property type="term" value="F:phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042158">
        <property type="term" value="P:lipoprotein biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001640">
        <property type="entry name" value="Lgt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01790">
        <property type="entry name" value="LGT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="67"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="91"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007150"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92898.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="110" mass="11755" checksum="B56EF6149C6C12FB" modified="2018-04-25" version="1" fragment="single">PSQLYEAGLEGLLLGSLLWLAIRRGALKRPGRVIALFLIGYGLARTLIEGLRQADALFVTPDNPLWPRGPPGRRLGPDHGAGPVRRSSTRRGWRGCSSAPCSGSRSGAAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6A2</accession>
    <name>A0A2M9P6A2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24105</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002730">
        <property type="protein sequence ID" value="PJN93062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="131"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="131" mass="14301" checksum="9F6FBBB3C21A3689" modified="2018-04-25" version="1" fragment="single">AGRTYYIEVVGSGGNPLPDSVVSLYRNGNFITYDDQGGGGNDSRIVYTATQTGNFQVEVGGYADFYTGDYHLLVNEDDYKGTVDLETNGYNFNIYGNGTLGAVNTLGSQTATINYDGDADLFRHALYRRSY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6T7</accession>
    <name>A0A2M9P6T7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">HTH_7 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_22205</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002236">
        <property type="protein sequence ID" value="PJN93266.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000150">
        <property type="term" value="F:DNA strand exchange activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006120">
        <property type="entry name" value="Resolvase_HTH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02796">
        <property type="entry name" value="HTH_7"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH_7" evidence="2">
        <location>
            <begin position="33"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="19"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF02796"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93266.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8924" checksum="9F1B97631939668A" modified="2018-04-25" version="1" fragment="single">GTFALLAELVRAEQQQRQREGIEAARRRNQHMGRPQKMNGQQMAEARARIEAGEAVRVVARAYTVTPKTLRATLARQKP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Z0</accession>
    <name>A0A2M9P6Z0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Sugar ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_22090</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial solute-binding protein 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002204">
        <property type="protein sequence ID" value="PJN93280.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006059">
        <property type="entry name" value="SBP"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01547">
        <property type="entry name" value="SBP_bac_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0574">Periplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="4">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014825460" evidence="4">
        <location>
            <begin position="23"/>
            <end position="109"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="109"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93280.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="11951" checksum="23ACEFE15EDC6D5F" modified="2018-04-25" version="1" fragment="single">MKPFTLLLGAASALALTAAANAQELTIATVNNGDMIRMQALTSDFNAKHPDIKINWVTLEENILRERVTTDIATQGGQYDILTIGNYEVPIWGKQGWLVELDGLGDDYD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P712</accession>
    <name>A0A2M9P712_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_21575</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002068">
        <property type="protein sequence ID" value="PJN93341.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93341.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18426" checksum="EBAB6A6B826B8EE0" modified="2018-04-25" version="1" fragment="single">MALMEALQKADDGNFLRSLAETVLQILMEADVEGMIGAGRYERSGERSTWRNGYRDRTLDTRLGQLNLRIPKLRTGSYFPPFLDARKTTEKALVSVIQEAWIAGVSTRKVDDLVQAMGLSGISKSQVSKLCKEIDERVGAFLNRPLEGDWPYLWLDATYLKVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P766</accession>
    <name>A0A2M9P766_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002007">
        <property type="protein sequence ID" value="PJN93377.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93377.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="36" mass="4342" checksum="34DCF967016E0575" modified="2018-04-25" version="1" fragment="single">QILKGLTPYEFIFKRWTIEPERFIVDPIHQMPGINN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7K7</accession>
    <name>A0A2M9P7K7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_20310</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the bacterial solute-binding protein 5 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001801">
        <property type="protein sequence ID" value="PJN93505.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039424">
        <property type="entry name" value="SBP_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000914">
        <property type="entry name" value="SBP_5_dom"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30290">
        <property type="entry name" value="PTHR30290"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00496">
        <property type="entry name" value="SBP_bac_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014780171" evidence="2">
        <location>
            <begin position="25"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="SBP_bac_5" evidence="3">
        <location>
            <begin position="101"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93505.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="15668" checksum="8D517B2159D0211C" modified="2018-04-25" version="1" fragment="single">MTRIIGTALALGLGLCLAPALAGAEPRHAIAMYGEPDLPPDFVALPYANPDAPKGGTIVFGETGGFDSLNPYILKGRAPWAVQTLVFETLMARNWDEPFTLYGLLAESIDVGEARDRVEFTLRPEARFSDGSPVTVEDVIWSMET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7N7</accession>
    <name>A0A2M9P7N7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">RP-C_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_20285</name>
        <name evidence="2" type="ORF">CNY89_25520</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003137">
        <property type="protein sequence ID" value="PJN92901.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001796">
        <property type="protein sequence ID" value="PJN93510.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021760">
        <property type="entry name" value="RP-C_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11800">
        <property type="entry name" value="RP-C_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RP-C_C" evidence="1">
        <location>
            <begin position="1"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF11800"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92901.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93510.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="57" mass="6311" checksum="06DC3E10C1E73A1B" modified="2018-04-25" version="1">MGWCEAAITVLCLLERFKHIRNPAGYLSHLTRQAEQGSFSLAVLLQATRASSHQIVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q0</accession>
    <name>A0A2M9P7Q0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">DDE_Tnp_Tn3 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_20010</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the transposase 7 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001741">
        <property type="protein sequence ID" value="PJN93549.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002513">
        <property type="entry name" value="Tn3_Tnp_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01526">
        <property type="entry name" value="DDE_Tnp_Tn3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="4" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0814">Transposable element</keyword>
    <keyword evidence="3" id="KW-0815">Transposition</keyword>
    <feature type="domain" description="DDE_Tnp_Tn3" evidence="6">
        <location>
            <begin position="8"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF01526"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93549.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14350" checksum="FFD004A9FA9BB117" modified="2018-04-25" version="1">MSDWGHVTTRELNKGEAENALKRAIFFHRVGRIRDHGLQAQSHRASAVNLVACAIVLWNTTYLQAAIERLSAAGRLFPMTISRTCPRWDRQHINLTGDYLWADDDMPADRLKPLRQLPGLSEQTSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Q5</accession>
    <name>A0A2M9P7Q5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19780</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001693">
        <property type="protein sequence ID" value="PJN93581.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="1"/>
            <end position="172"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="205"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93581.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22301" checksum="FE84105C5014CD23" modified="2018-04-25" version="1" fragment="single">DRRPARLGASLSADARPDPSLTERPMAEAFIYDAIRTPRGKGRPDGALHEVTALRLSALTLDALMERKPAALSGGQQQRLAIARALAKEASLMLFDEPLVNLDYKLREELRAELRAIFHEGRQTVVYATTEPDEALQMGGETIILHEGRVLQKGPTHQVYRRPASTLVADIFSEPPMNVAEARIAGGRLTLGGIEIAAPAHALGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7R4</accession>
    <name>A0A2M9P7R4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20075</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001755">
        <property type="protein sequence ID" value="PJN93540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8869" checksum="BC555FC9869DC46A" modified="2018-04-25" version="1" fragment="single">MLTCVPFAWVWMTPSQFKDFSEAIVAVTLFSSNILFWLQTDYFAPLADAESSAAHLESGGRGTILRVLSAPDDLPVAFRSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V0</accession>
    <name>A0A2M9P7V0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Xanthine dehydrogenase accessory protein XdhC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19520</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001634">
        <property type="protein sequence ID" value="PJN93621.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93621.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="30" mass="3058" checksum="2A50E11FD8794C51" modified="2018-04-25" version="1" fragment="single">KRPEVIAALVAAEIITRLTAPARAPAATDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V2</accession>
    <name>A0A2M9P7V2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fis family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001669">
        <property type="protein sequence ID" value="PJN93599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045865">
        <property type="entry name" value="ACT-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002912">
        <property type="entry name" value="ACT_dom"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55021">
        <property type="entry name" value="SSF55021"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51671">
        <property type="entry name" value="ACT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ACT" evidence="1">
        <location>
            <begin position="2"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="106"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51671"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11258" checksum="2840A97CDF867417" modified="2018-04-25" version="1" fragment="single">MRLRVTFSDRVGIAQEILGVLASRALDVSAVEVEPPHVYIEAHALDEAGLTSLRADVMTIGDVHSVEPVSMLPGARRRLYLDALLASLADPVLAVDAAGRVMIANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7V5</accession>
    <name>A0A2M9P7V5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Nudix hydrolase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_19590</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001653">
        <property type="protein sequence ID" value="PJN93609.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015797">
        <property type="entry name" value="NUDIX_hydrolase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020084">
        <property type="entry name" value="NUDIX_hydrolase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000086">
        <property type="entry name" value="NUDIX_hydrolase_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00293">
        <property type="entry name" value="NUDIX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55811">
        <property type="entry name" value="SSF55811"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00893">
        <property type="entry name" value="NUDIX_BOX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Nudix hydrolase" evidence="3">
        <location>
            <begin position="9"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="73"/>
            <end position="105"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="126"/>
            <end position="163"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="2">
        <location>
            <begin position="148"/>
            <end position="163"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00293"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93609.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="17757" checksum="8A1F44360EE6BAA5" modified="2018-04-25" version="1">MSALKVTDGGVDPGESPIRALHREVLEETGWTISIQRRLGAFQRYTFMPEYDLWARKVCAVYLCRPNTSTGWRTPERRIESLSSRSASPSSPVRSRGTALSSISSSATRTTVSSIPILRLYAREDRPGTGGVAGRGGGRGGGMRNGFQKHFSQENVWPAPSAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7Y8</accession>
    <name>A0A2M9P7Y8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">ABC transporter domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19370</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001609">
        <property type="protein sequence ID" value="PJN93645.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="18"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="147"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93645.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="16037" checksum="173AD5FD18A8FD8D" modified="2018-04-25" version="1" fragment="single">MIEIQALTKLYDDAPVVEDVSMSLAAGSVTAIVGTSGSGKSTLLRMINRLVTPSSGRVLIDGTDTRDVEPATLRRRIGYVIQDHGLFPHWTAARNVATVPTLLGWPRTEIDARVDVIQDHGLFPHWTAARNVATVPTLLGWPRTEID</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P805</accession>
    <name>A0A2M9P805_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alkane 1-monooxygenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19135</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001564">
        <property type="protein sequence ID" value="PJN93681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004497">
        <property type="term" value="F:monooxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016705">
        <property type="term" value="F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011251">
        <property type="entry name" value="Luciferase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036661">
        <property type="entry name" value="Luciferase-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00296">
        <property type="entry name" value="Bac_luciferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51679">
        <property type="entry name" value="SSF51679"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0503">Monooxygenase</keyword>
    <keyword evidence="2" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bac_luciferase" evidence="1">
        <location>
            <begin position="4"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00296"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7413" checksum="70D28A3BCFDA5A5B" modified="2018-04-25" version="1" fragment="single">MIPFSVLDLAPVPEGATPAQALSNTLDLARHAEAWGYRRYWLAEHHNMEGIASAATAVVIGAVAAATRTI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P814</accession>
    <name>A0A2M9P814_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Ribulose-phosphate 3-epimerase</fullName>
            <ecNumber evidence="7">5.1.3.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="13" type="primary">rpe</name>
        <name evidence="13" type="ORF">CNY89_19125</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>D-ribulose 5-phosphate = D-xylulose 5-phosphate</text>
            <dbReference type="Rhea" id="RHEA:13677"/>
            <dbReference type="ChEBI" id="CHEBI:57737"/>
            <dbReference type="ChEBI" id="CHEBI:58121"/>
            <dbReference type="EC" id="5.1.3.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3">
            <name>Co(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:48828"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="5">
            <name>Fe(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29033"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29035"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="4">
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="11">
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </cofactor>
        <text evidence="11">Binds 1 divalent metal cation per subunit.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ribulose-phosphate 3-epimerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.1" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01001563">
        <property type="protein sequence ID" value="PJN93682.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004750">
        <property type="term" value="F:D-ribulose-phosphate 3-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006098">
        <property type="term" value="P:pentose-phosphate shunt"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00429">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_02227">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR026019">
        <property type="entry name" value="Ribul_P_3_epim"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000056">
        <property type="entry name" value="Ribul_P_3_epim-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11749">
        <property type="entry name" value="PTHR11749"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00834">
        <property type="entry name" value="Ribul_P_3_epim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF001461">
        <property type="entry name" value="RPE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01163">
        <property type="entry name" value="rpe"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01085">
        <property type="entry name" value="RIBUL_P_3_EPIMER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01086">
        <property type="entry name" value="RIBUL_P_3_EPIMER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="11" id="KW-0170">Cobalt</keyword>
    <keyword evidence="9" id="KW-0413">Isomerase</keyword>
    <keyword evidence="11" id="KW-0464">Manganese</keyword>
    <keyword evidence="8 11" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="11" id="KW-0862">Zinc</keyword>
    <feature type="region of interest" description="Substrate binding" evidence="12">
        <location>
            <begin position="145"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="active site" description="Proton acceptor" evidence="10">
        <location>
            <position position="38"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="10">
        <location>
            <position position="176"/>
        </location>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="11"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="36"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="38"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="11 12">
        <location>
            <position position="69"/>
        </location>
    </feature>
    <feature type="binding site" evidence="11">
        <location>
            <position position="176"/>
        </location>
        <ligand>
            <name>a divalent metal cation</name>
            <dbReference type="ChEBI" id="CHEBI:60240"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="12">
        <location>
            <position position="178"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001936"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00001947"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00001954"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00009541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00013188"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="PIRSR" id="PIRSR001461-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN93682.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="204" mass="21574" checksum="411620B8F13226D3" modified="2018-04-25" version="1" fragment="single">TFDRSIKIAPSILSADFANFGAECEAIEAQGCDWVHVDVMDGHFVPNITFGPATCAAIRPHIKGVMDVHLMIAPVDPYIEAFANAGADVISAHLEAGPHIHRTLQAIRGAGARAGLALNPGTPVEAVEYLLDLTDLICVMTVNPGFGGQKFIHSQVAKVRRLREMIGDRPVHIEIDGGVTTETAPLVAKAGAHPYQGCAHAPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P866</accession>
    <name>A0A2M9P866_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Probable multidrug resistance protein NorM</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19020</name>
        <name evidence="4" type="ORF">CNY89_27055</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1">Multidrug efflux pump.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003623">
        <property type="protein sequence ID" value="PJN92742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001547">
        <property type="protein sequence ID" value="PJN93700.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015297">
        <property type="term" value="F:antiporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042910">
        <property type="term" value="F:xenobiotic transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002528">
        <property type="entry name" value="MATE_fam"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01554">
        <property type="entry name" value="MatE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="42"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="83"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00003408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020268"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93700.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8957" checksum="1F271A040A8DE1E5" modified="2018-04-25" version="1" fragment="single">MRHVVVMTMTGAIGLTFMFLIDAATLFWVSRLGDPRLMAALGFAWTIQFFIISSGIGFAIATTALVSRALGEGGRAQARRYAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P889</accession>
    <name>A0A2M9P889_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GMC family oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18620</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001486">
        <property type="protein sequence ID" value="PJN93755.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016614">
        <property type="term" value="F:oxidoreductase activity, acting on CH-OH group of donors"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007867">
        <property type="entry name" value="GMC_OxRtase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05199">
        <property type="entry name" value="GMC_oxred_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GMC_oxred_C" evidence="1">
        <location>
            <begin position="22"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05199"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93755.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9948" checksum="77DDE2ACBEF2CEFF" modified="2018-04-25" version="1" fragment="single">RARLRDWVLPDPIAWPDTTQDEVAGKHHMGTTRMAADPARGVVDAECRVHGIGNLYIGGSSVFATSGHANPTYTIIQLTLRLGDRLGKVLKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8B3</accession>
    <name>A0A2M9P8B3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_18400</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001454">
        <property type="protein sequence ID" value="PJN93787.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="248"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93787.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="26213" checksum="0A696388F607292E" modified="2018-04-25" version="1" fragment="single">MYSAYLVGGRIYYLELEGTATDEGTLDDPLLSLRLGGSLLASDNDGGVGLNARIVFAPAVSGRYAFDVGGIGSSTGSYLLRVNVDDLRNTAEGVGASGMAGNLLPAPAGRIDYAGDTDVFSTYLIEGLRYAFAQGGWSSDNGTLEDPFLVLLDDEDRVLAFNDDDPTYLTLDSWFEYQATYTGEHFLQAGAYDDYTGSYRVGVGVGVATIRDDVVNGTSRPDGIDGFRGNDLLYGNGGDDFLFGGTGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8F1</accession>
    <name>A0A2M9P8F1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="13">Cytochrome ubiquinol oxidase subunit I</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="13" type="ORF">CNY89_18235</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the cytochrome ubiquinol oxidase subunit 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001426">
        <property type="protein sequence ID" value="PJN93816.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070069">
        <property type="term" value="C:cytochrome complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019646">
        <property type="term" value="P:aerobic electron transport chain"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002585">
        <property type="entry name" value="Cyt-d_ubiquinol_oxidase_su_1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30365">
        <property type="entry name" value="PTHR30365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01654">
        <property type="entry name" value="Cyt_bd_oxida_I"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="8" id="KW-0249">Electron transport</keyword>
    <keyword evidence="5" id="KW-0349">Heme</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11 12" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6 12" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="9 12" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="64"/>
            <end position="83"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="95"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="196"/>
            <end position="220"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="12">
        <location>
            <begin position="232"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="13">
        <location>
            <position position="261"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN93816.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="261" mass="28926" checksum="B3FEECD2FF66A99D" modified="2018-04-25" version="1" fragment="single">GAAFLRHLHGALGTLISATWILASNSWMQTPQGFEILGGRVVPVNWLEVIFNPSFPYRLVHMTLAAYLATALFVGASAAWHILRRRNTPAIRRSLSMAMWMLLIVAPLQIFAGDQHGLNTLEHQPAKLAAIEGHWENHPGEGVPLILFGWPDMAAETTRYAIEIPRMGSLLLTHSWDGTIPALKDFAPGDRPNSTVVFWSFRIMVGLGFLMLGLAVWSAWLRRQGDLYRNRLFLRAAVAMGPAGILAILAGWFTTEIGRQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8G9</accession>
    <name>A0A2M9P8G9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_18195</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001420">
        <property type="protein sequence ID" value="PJN93824.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015655">
        <property type="term" value="F:alanine:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001463">
        <property type="entry name" value="Na/Ala_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30330">
        <property type="entry name" value="PTHR30330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01235">
        <property type="entry name" value="Na_Ala_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00175">
        <property type="entry name" value="NAALASMPORT"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="34"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="75"/>
            <end position="96"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="102"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93824.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="16662" checksum="EF5C0FFF0931FD45" modified="2018-04-25" version="1">MILLSGVYVPGGEVTGTALTQLAMGEHIGAAGPYFIAVAIFFFAFTSIIGNYSYSEMAMVYLGAGHKGALTGLRVVVLVMVVWGALQAVATVFDVADASMGLMASINLIAIVALSGTVVKLTKDYFDQRKRGLEPRFHGHDYPELKGVDATIWTRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P0</accession>
    <name>A0A2M9P8P0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17660</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001356">
        <property type="protein sequence ID" value="PJN93906.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="31"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="64"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93906.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="64" mass="7323" checksum="88AE1B0635BE7E57" modified="2018-04-25" version="1" fragment="single">MITRNDPSLPLDLRLPETTAPPKRSWFRKQYLLVLLLPVVMFSGGVIGMYFQPPALRQFYALTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8P9</accession>
    <name>A0A2M9P8P9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17635</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001352">
        <property type="protein sequence ID" value="PJN93910.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025841">
        <property type="entry name" value="CP_ATPgrasp_2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14403">
        <property type="entry name" value="CP_ATPgrasp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93910.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="117" mass="13626" checksum="0DE5BBD0F2024695" modified="2018-04-25" version="1" fragment="single">MTTDFSGGRAITFFNEMYDGDAVRPAYQAVQEWVQQTPSDSIAQKKQEAEALFRRIGITFAVYGEGGDVERLIPFDMMPRVFTEREWRRLERGVKQRARALNAFLYDVYHRAEIIRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P928</accession>
    <name>A0A2M9P928_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Thiamine biosynthesis protein ThiF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16895</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001253">
        <property type="protein sequence ID" value="PJN94035.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94035.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="39" mass="4424" checksum="9363F8DA43F48833" modified="2018-04-25" version="1" fragment="single">LCCRSGLRSWRAARRLQAVWDGEIQLVALGDPSRKDRSP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Q0</accession>
    <name>A0A2M9P9Q0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15665</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001100">
        <property type="protein sequence ID" value="PJN94241.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94241.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="22429" checksum="03323AA56D9DACAA" modified="2018-04-25" version="1" fragment="single">SHRRLGDPEEMTARHQAFRALCARVEAYRAAEPFEDWDTGVFRFEPETGCAREVRDLEVPQGCGQDLGRRARVRLILERQDEDLHVCVLEHPLSQAPLTLAARDAVARSLAAEFLPERRGWRERLRRKTRSKLMVHVIVRPFQPSGGERRVREEEILRDGAGRIQVVETGVVRGVPPLMVREILDMDPALRQAVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R7</accession>
    <name>A0A2M9P9R7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Electron transfer flavoprotein-ubiquinone oxidoreductase</fullName>
            <shortName evidence="9">ETF-QO</shortName>
            <ecNumber evidence="9">1.5.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_15410</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Accepts electrons from ETF and reduces ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H(+) + oxidized [electron-transfer flavoprotein]</text>
            <dbReference type="Rhea" id="RHEA:24052"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="1.5.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.1" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01001070">
        <property type="protein sequence ID" value="PJN94285.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004174">
        <property type="term" value="F:electron-transferring-flavoprotein dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040156">
        <property type="entry name" value="ETF-QO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10617">
        <property type="entry name" value="PTHR10617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 9" id="KW-0274">FAD</keyword>
    <keyword evidence="3 9" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="7 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <keyword evidence="8 9 10" id="KW-0830">Ubiquinone</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94285.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="343" mass="37173" checksum="1ABA107FC2F31C83" modified="2018-04-25" version="1" fragment="single">MAEIEREAMEYDVVVVGAGPAGLSAAIRLKQLDPDLSVVVLEKGSEVGAHILSGAVLDPCGLDALIPDWRQKGAPIHTPVTDDRFYMLGPGGEVRIPNWPMPPLMDNHGNYVVSMGNVCRWMATQAEELGVEIFPGMAASALVWEGETVVGVVAGEFGLEPDRTPGPGYEPGMELRGKYVMIAEGVRGSLSRQLIERFDLSKGHEPQKFGLGMKELWEVRPEVHQAGLVMHTMGWPLGGNAGGGSFVYHLENNQVYVGFVVHLNYANPYLNPYLEFQRFKHHPLLAELLKGGRRVAYGARAITEGGWQSLPKLTFPGGVLLGCSAGMVNVPRIKGNHNAMLSG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R9</accession>
    <name>A0A2M9P9R9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001067">
        <property type="protein sequence ID" value="PJN94287.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="331"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94287.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="331" mass="36614" checksum="F3954F46D2C7A7C3" modified="2018-04-25" version="1" fragment="single">MRGQRLWVGWILNSRPSVGGPVSIWIDKRKVTLSGDLFDFAGDGAIATNPVWVRDELPPEYLARFWIGLGGQTAPPDWILDAAPEFFLPTDRLQGRTVLWAEFRSGGERKRAKRWRNIPPRVQVEMNWSAVWDPRDAGQDPEAPESWTFSRNASLCTLDALRNNPVARYRLRHLHLPSWVDKADVDGQLVALRDGGTQERYPIGGVIDWSAGEVERLIEPMVLASLGGLTRVGGRLAAIPGAWQEPEVTLSRALKGQDLVIDGHQPGDQMYSSVRTTYIEPAQDWQEADAGVCEIPGAAAEDGGLPREKKVHLEFCNDGVQGQRSRPGAGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9S7</accession>
    <name>A0A2M9P9S7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15350</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001063">
        <property type="protein sequence ID" value="PJN94295.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94295.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="7032" checksum="0862D5E260DE2B71" modified="2018-04-25" version="1">MTLEVQIDDYARRLFSASGDKAEYEAAQKAKECEARGDRGEAEQWRKVREKIRILRGPSMS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA23</accession>
    <name>A0A2M9PA23_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14920</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001021">
        <property type="protein sequence ID" value="PJN94371.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94371.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7348" checksum="5EDAB50E73AC388D" modified="2018-04-25" version="1">MVHGFSKIDRLDVSAFDFDTMAELREATTVSRGSTFIELDGNDTIVLAGVDWSLQTRHLIFDDISA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA77</accession>
    <name>A0A2M9PA77_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">DUF3883 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_14555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000983">
        <property type="protein sequence ID" value="PJN94432.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR024975">
        <property type="entry name" value="NOV_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13020">
        <property type="entry name" value="DUF3883"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF3883" evidence="1">
        <location>
            <begin position="160"/>
            <end position="256"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13020"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94432.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="278" mass="31403" checksum="51F5565ED86D52B5" modified="2018-04-25" version="1">MSNGPWTDEENDLIVADYFAMLADDISARRYSKAEHRRALLPLLNDRSEGSVEFKHQNISAVLKGLGEDWIPGYKPAFNFQMTLVDAVARWLALNPAWLGRQPGLQPGAGLREAAQIWIGPPPTLSNQPPPQELDQMLHIARKFDVAGRDERNRALGRAGEERVLAHERASLRSAGRDDLARKVRWVSEEDGDGAGYDIASFALDGLPRLIEVKTTNGWERTPFHITRNELAVAEERRSEWRLLRLWNFSREPKAFELHPPLDAHVSLTATTFQASFH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA81</accession>
    <name>A0A2M9PA81_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Pseudoazurin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14410</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Cu cation</name>
            <dbReference type="ChEBI" id="CHEBI:23378"/>
        </cofactor>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Periplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000966">
        <property type="protein sequence ID" value="PJN94453.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042597">
        <property type="term" value="C:periplasmic space"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005507">
        <property type="term" value="F:copper ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd04218">
        <property type="entry name" value="Pseudoazurin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.420">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002386">
        <property type="entry name" value="Amicyanin/Pseudoazurin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000923">
        <property type="entry name" value="BlueCu_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028871">
        <property type="entry name" value="BlueCu_1_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001235">
        <property type="entry name" value="Copper_blue_Plastocyanin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008972">
        <property type="entry name" value="Cupredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012745">
        <property type="entry name" value="Pseudoazurin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00127">
        <property type="entry name" value="Copper-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00155">
        <property type="entry name" value="AMICYANIN"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00156">
        <property type="entry name" value="COPPERBLUE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49503">
        <property type="entry name" value="SSF49503"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02375">
        <property type="entry name" value="pseudoazurin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00196">
        <property type="entry name" value="COPPER_BLUE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0574">Periplasm</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Copper-bind" evidence="5">
        <location>
            <begin position="2"/>
            <end position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001935"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022764"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00127"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94453.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12396" checksum="17BACF1097B89AF4" modified="2018-04-25" version="1">MLNKGAAGSMVFEPDFVQAAPGDVVHFVAVDKGHDVENIKGMIPDGVEPFKGAMNENFDLTVTAEGVYGVKCTPHYPLGMVALIVVGDPASNLEAAKAAKNPKKAQERLDAAFAQIGQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAH3</accession>
    <name>A0A2M9PAH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14030</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000930">
        <property type="protein sequence ID" value="PJN94519.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94519.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="289" mass="33186" checksum="6478B77D6286DCEC" modified="2018-04-25" version="1">MFYPTPRDWREAAHKRVALFGMSGLGKTHISTMLRDEAEWFHYSVDFRIGTRYMGEHIVDNFKREAMRNPFLRELLRSDSIYIASNISFHNLAPLSTYLGKPGDPGRGGIPFDQYLRRQRQHRTAEIAATRDALAFIDKAQEIYGYDHFVCDTSGSLCEVTDPFDPADPVLTDLTSQALLVWIRGSDAHVRALCARFDKAPKPMYYPEDFLIRLWDGYRLERGLAPDQVDPDDFVRHGFEALIAHRLPRYAAMAERWGVVVEADEVAEVRDPRDFDALMETAIARRAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAK4</accession>
    <name>A0A2M9PAK4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">L-erythrulose-1-phosphate isomerase</fullName>
            <ecNumber evidence="2">5.3.1.33</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_13865</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>L-erythrulose 1-phosphate = D-erythrulose 4-phosphate</text>
            <dbReference type="Rhea" id="RHEA:49588"/>
            <dbReference type="ChEBI" id="CHEBI:58002"/>
            <dbReference type="ChEBI" id="CHEBI:90796"/>
            <dbReference type="EC" id="5.3.1.33"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.33" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000913">
        <property type="protein sequence ID" value="PJN94552.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004807">
        <property type="term" value="F:triose-phosphate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035990">
        <property type="entry name" value="TIM_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000652">
        <property type="entry name" value="Triosephosphate_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00121">
        <property type="entry name" value="TIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51351">
        <property type="entry name" value="SSF51351"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51440">
        <property type="entry name" value="TIM_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0413">Isomerase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000148"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00012597"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00016006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94552.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6000" checksum="E69225E6B55ECDB2" modified="2018-04-25" version="1" fragment="single">MLRKLVAGNWKMNGLKASAAVLEDLTAACPAPGCDVLICPPATLVAAFAGKGWTSRSR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAQ2</accession>
    <name>A0A2M9PAQ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">MFS transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_13515</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000879">
        <property type="protein sequence ID" value="PJN94606.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.1250.20">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011701">
        <property type="entry name" value="MFS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020846">
        <property type="entry name" value="MFS_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036259">
        <property type="entry name" value="MFS_trans_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07690">
        <property type="entry name" value="MFS_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF103473">
        <property type="entry name" value="SSF103473"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50850">
        <property type="entry name" value="MFS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="32"/>
            <end position="53"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="90"/>
            <end position="108"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="129"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="156"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="202"/>
            <end position="222"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="242"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="271"/>
            <end position="290"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="296"/>
            <end position="316"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="328"/>
            <end position="351"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="357"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="domain" description="MFS" evidence="6">
        <location>
            <begin position="1"/>
            <end position="382"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94606.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="383" mass="40878" checksum="C1A7212DA672AB8C" modified="2018-04-25" version="1">MTRAEADDVLPMLNDIMQALLTSLYPLLKANYALDFAQIGLLTFAFQVTASFLQPVVGVVTDRWPMPFSSPVAMLSTAAGLLTLAHAHSFPILVLGACLIGLGSAIFHPEASRVARLASGGRHGLAQSVFQVGGNAGSAIGPLLAAFIVIPRGQESLSWFALLALAGFAMLSWTGVWHSRHRRNNAGRPPVSRALPLSRGKVMTTLAVLVVLVATKNSYLASLSSYFTFYTIDKFGLDIQDAQVLLFMFLGASAVGVFFGGPIGDRFGSRFVIWFSILGVIPFALMLPYANLFWTATLVVVIGFIFSSAFSAIVVFAQELVPGRVGLIAGLFFGLAFGFGGVGAAVLGMLADREGIAFVYRLCSYLPLLGLLTILLPRLPGRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT9</accession>
    <name>A0A2M9PAT9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">AB hydrolase-1 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_13195</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000844">
        <property type="protein sequence ID" value="PJN94657.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009058">
        <property type="term" value="P:biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008220">
        <property type="entry name" value="HAT_MetX-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR32268">
        <property type="entry name" value="PTHR32268"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00561">
        <property type="entry name" value="Abhydrolase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="3">
        <location>
            <begin position="116"/>
            <end position="244"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="356"/>
            <end position="376"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="400"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00561"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94657.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="400" mass="43168" checksum="2614D197EF2DC770" modified="2018-04-25" version="1" fragment="single">MAAQQAAPITARSSVADLDTLKITVEIPDFRLGGTYDLATPEAWANGAPDGVTLESLGAEPLRGSYIAVGTPHRGPDGKIDNAIVISSFYSGDATSMYFNWVEGQGGNAFSGGPLVGPGMVFDTDRFYVVMLDALGLWGASKPSDGLGMDFPHYSYFDMVQANYRLLTDELNIGHVTLATGVSMGATQSYVWGLMHPEFVSAVMPIGGATATDGTAPIAAWSFQNAKAGLEGDPIWQRTKGRYYDKPKAEHPRQGPAFHWSMLSLTGYDLAHRQSLGWDAVKGSVFAWDPPEPGFGADMARLAETFDAVDLKYRVEVGETHNIDAYLPDYQPRTMVIHIENDQWLTVDKARESVGLIPGASSPPRRARSRITPPSARSTACRTTRCCRASCTTSGSCRPT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAV4</accession>
    <name>A0A2M9PAV4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13155</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000840">
        <property type="protein sequence ID" value="PJN94666.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94666.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="63" mass="6759" checksum="4525F0EACDC6DBCE" modified="2018-04-25" version="1" fragment="single">PDVLVLDEATSALDNLTERAVMDAVHNLGGQKTIIMIAHRLSTVQDCDRISTDRAFAAPARPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAY9</accession>
    <name>A0A2M9PAY9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000820">
        <property type="protein sequence ID" value="PJN94704.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94704.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="284" mass="28868" checksum="37293E0F34AF5955" modified="2018-04-25" version="1">MNTLGSQTATINYDGDADLFATSLIAGLTYTVEARGSATGNGSLDDPYLYLIDQYGNYISEDDDSNGNLNAAIQFQAGYSGTHYLEAHSYANADTGTYQVFVSTGVASGASNNIVGLSSRDAIDGAGGNDTIQGAGANDVLIGGTGNDTLRGQSGNDYLRGGSGVDILIGGVGNDRFDFDLTSESTPTVRDVIRAGDSATAFQGAGATVADVIDLSTIDANANAAGNQAFLFGGTGIGRISVSTSGTNSLVQGNTDSDSAFEFAVLIEDGGTLASAYRASDFIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ3</accession>
    <name>A0A2M9PAZ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF2271 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12995</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000826">
        <property type="protein sequence ID" value="PJN94692.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014469">
        <property type="entry name" value="DUF2271"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10029">
        <property type="entry name" value="DUF2271"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94692.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="147" mass="15367" checksum="757EDDCA3CCE00F9" modified="2018-04-25" version="1">MTTALTLPGLAMARPVTLTTTLNNYGGDGAYLALYVTDASGAYVGSLWMAGGKSKYYEHLSDWYRATGGDTAQVNGITGASVGAGRTLEITLDLADALFDAGYTLHIDAAVEDMRDSPNEVAVPLTNGGAGTPVQGRRYVASFAYDM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB16</accession>
    <name>A0A2M9PB16_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12720</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000803">
        <property type="protein sequence ID" value="PJN94733.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="2">
        <location>
            <begin position="104"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="1">
        <location>
            <begin position="70"/>
            <end position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94733.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="125" mass="13608" checksum="8AC759FBB74D4734" modified="2018-04-25" version="1">MPPRPTDRRPTLTLKGEEITPEFRSLMNKAAKKAGTTQVAFAVGAIAAAARQILTGETQDQAKASPPAVIEGLREEIDRHAAKTRQEMAELREQMMATNRLVAEMGAPGEAKPRGVLSRLFGKRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB38</accession>
    <name>A0A2M9PB38_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12595</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000790">
        <property type="protein sequence ID" value="PJN94754.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010406">
        <property type="entry name" value="DUF1003"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41386">
        <property type="entry name" value="PTHR41386"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06210">
        <property type="entry name" value="DUF1003"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="62"/>
            <end position="82"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="102"/>
            <end position="122"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="195"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94754.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="195" mass="21810" checksum="973ED4385EBB5EB7" modified="2018-04-25" version="1">MPEEHDRHERLARRLFGRSAHKLDADEATVLRGIATQTPISRDAGDIDEAAASFGDRLADRVAAVGGSWGFIIAFGAVLFSWMALNSGVLSRLGIAFDPYPYIFLNLMLSTLAAIQAPVIMMSQNRQAAKDRLTATLDYQVNLRTELEILRIQEKIDQILIERLDRILARLEDTPRLEDRPSPEDRPQDRDGPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB75</accession>
    <name>A0A2M9PB75_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12415</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000774">
        <property type="protein sequence ID" value="PJN94783.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94783.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7552" checksum="44E025870A8C6062" modified="2018-04-25" version="1">MSQNAVERAKAERTSERDTLDLARNRMVTVDEAEAASSYQAHKVQLEALYVVMANLSDLRFSNYMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB85</accession>
    <name>A0A2M9PB85_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Amine oxidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_12375</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000769">
        <property type="protein sequence ID" value="PJN94792.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002937">
        <property type="entry name" value="Amino_oxidase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01593">
        <property type="entry name" value="Amino_oxidase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Amino_oxidase" evidence="1">
        <location>
            <begin position="14"/>
            <end position="489"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="503"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01593"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94792.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="503" mass="56290" checksum="C89F1A7A64AB23BE" modified="2018-04-25" version="1" fragment="single">DRRGAPVAVIGAGVAGIVAAYELMKLGLRPVIYESGQLGGRLRSQRFEGTDGIVAELGGMRFPLSSTAFYHYVDLLGLETAPFPNPLTPAAGSTVIDVFGETFYAETLDDLPPLFREVAAAYDEALEEGAHFSDLKAAIRARDGRRVKEIWNPIVAGWDERTFYDFVASSTAFKRVPFRHREIFGQVGFGTGGWDSDFPNSMLEILRVNVTECDENQRHVVGGVEQVPQRLWRRFPDRAAHWPEGTSLSRLHGGATRPAARRLFRGPDDRLAITDQWGRTDTFEAVIATCQSWLLTTTIDTEERLFSHEMWMALDRTRYMQSSKTFVLVDRPFWRDRDPLTGRQVMSMTLTDRLTRGTYLFDNGEGRPGVICLTYSWMSDALKMLPFPVERRVELALSALEKIYPGLDIRGHIVGDPITVSWESDPNFLGAFKGALPGHYRYNHRMYRHFMQGGLPPEQRGLFLAGDDISFTPAWVEGAVQTALNAVWGVMRHLGGASPAANP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC0</accession>
    <name>A0A2M9PBC0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DUF294_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_12160</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000746">
        <property type="protein sequence ID" value="PJN94828.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018821">
        <property type="entry name" value="DUF294_put_nucleoTrafse_sb-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10335">
        <property type="entry name" value="DUF294_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF294_C" evidence="2">
        <location>
            <begin position="2"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF10335"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94828.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="51" mass="5911" checksum="3F55C4AE399A236F" modified="2018-04-25" version="1">MRCNAEQAQAGGPLGNRVNPSRLNDLDRRILRESFKEARRLQQKLALDYQL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBD1</accession>
    <name>A0A2M9PBD1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Damage-inducible protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12085</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000738">
        <property type="protein sequence ID" value="PJN94841.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94841.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="53" mass="5305" checksum="354E3400BFB8796D" modified="2018-04-25" version="1" fragment="single">MLAELRSCIARLEQGRAQDRAALPFGVPSIDSVLPGGGLAFGALHEVAGGGDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBE9</accession>
    <name>A0A2M9PBE9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Phosphate regulon transcriptional regulatory protein PhoB</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="primary">phoB</name>
        <name evidence="10" type="ORF">CNY89_11955</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000727">
        <property type="protein sequence ID" value="PJN94861.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000156">
        <property type="term" value="F:phosphorelay response regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006817">
        <property type="term" value="P:phosphate ion transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00383">
        <property type="entry name" value="trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001867">
        <property type="entry name" value="OmpR/PhoB-type_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016032">
        <property type="entry name" value="Sig_transdc_resp-reg_C-effctor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011879">
        <property type="entry name" value="Sig_transdc_resp-reg_PhoB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039420">
        <property type="entry name" value="WalR-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR48111">
        <property type="entry name" value="PTHR48111"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00486">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00862">
        <property type="entry name" value="Trans_reg_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46894">
        <property type="entry name" value="SSF46894"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02154">
        <property type="entry name" value="PhoB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51755">
        <property type="entry name" value="OMPR_PHOB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-0592">Phosphate transport</keyword>
    <keyword evidence="6" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Response regulatory" evidence="8">
        <location>
            <begin position="4"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="domain" description="OmpR/PhoB-type" evidence="9">
        <location>
            <begin position="129"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="DNA-binding region" description="OmpR/PhoB-type" evidence="7">
        <location>
            <begin position="129"/>
            <end position="227"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="6">
        <location>
            <position position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00013332"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022592"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00024735"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01091"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS51755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN94861.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="231" mass="26105" checksum="D64EF37796FE8694" modified="2018-04-25" version="1">MCAKVLVVEDEEAISHLIAYNLEKEGFSVATVADGDEVMLAVDESKPDLVLMDWMLPNVSGIELCRQLRTKAETREIPVIMITARGEEEDRVRGLDVGADDYVTKPFSMSELVARMRAVLRRTAPALAGDVATFADIVLDRQSCRVRRGKRDIHLGPTEFRLLDVLLQRPGRVFSREQLLDRVWGHDVYVEIRTVDVHVGRLRKALNRRGEQDPIRTVRSSGYALDETYTA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF1</accession>
    <name>A0A2M9PBF1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF465 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000728">
        <property type="protein sequence ID" value="PJN94858.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.10.280.50">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007420">
        <property type="entry name" value="DUF465"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038444">
        <property type="entry name" value="DUF465_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04325">
        <property type="entry name" value="DUF465"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="32"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94858.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="58" mass="6656" checksum="AF58C0A2A3D6AB30" modified="2018-04-25" version="1">MTLSSHLSELRKKHQSLSETIEAEQRSPASSDLSIKQLKVKKLHLKEEIERLSSMPLQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBG9</accession>
    <name>A0A2M9PBG9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11815</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000715">
        <property type="protein sequence ID" value="PJN94880.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="89"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94880.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="10989" checksum="240089C54605865E" modified="2018-04-25" version="1" fragment="single">MRISLDSGVAGDRFASFPAGAFDRAGLERSPLRTVVFCTEKENREMKRLHILLPVAALMAMAGGAQADCREDLAQMRQGIAKDGSQAPLAEGTSATPQASDGQP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBJ0</accession>
    <name>A0A2M9PBJ0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_11735</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000708">
        <property type="protein sequence ID" value="PJN94892.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94892.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10065" checksum="6F378CCAEEF08B20" modified="2018-04-25" version="1">MSEIASVLLRLPTREFAVQRLFLRSAEFRALCDDHSAAWRALRHWEAQGPAFAARCTEYLSLLAEIEADLGTMLDADDPDSALPGSARSES</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBL8</accession>
    <name>A0A2M9PBL8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">MCD, Malonyl-CoA decarboxylase MCD</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000692">
        <property type="protein sequence ID" value="PJN94925.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0050080">
        <property type="term" value="F:malonyl-CoA decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006633">
        <property type="term" value="P:fatty acid biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.140.90">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038917">
        <property type="entry name" value="Malonyl_CoA_deC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007956">
        <property type="entry name" value="Malonyl_CoA_deC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042303">
        <property type="entry name" value="Malonyl_CoA_deC_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035372">
        <property type="entry name" value="MCD_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038351">
        <property type="entry name" value="MCD_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR28641">
        <property type="entry name" value="PTHR28641"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05292">
        <property type="entry name" value="MCD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17408">
        <property type="entry name" value="MCD_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MCD_N" evidence="2">
        <location>
            <begin position="5"/>
            <end position="74"/>
        </location>
    </feature>
    <feature type="domain" description="MCD" evidence="1">
        <location>
            <begin position="77"/>
            <end position="322"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF05292"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF17408"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94925.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="360" mass="39792" checksum="77A254041D423083" modified="2018-04-25" version="1" fragment="single">LEAVRAEGAGIEAVEALHAAAEPRRQELIRRLNLAPGGTAALVRMRAELLKHLRAHPELRRVDSDFAHLFSSWFNRGFLVLRHIDWTTPANILEKIIRYEAVHAIRNWDDLRNRLEPADRRCYGFFHPQLVDEPLIFVEVALTEAIPDRVGPLLDVGRQPIEAREATTAVFYSISNTQKGLAGVTFGNFLIKQVVEDLKGELPNVQTFVTLSPAPGFATWLAKERENAESPALDGVSRETLALLDEPGWHLDPAKTETLREALVPIAAYYFLTARTPDGRPVDPVARFHLGNGARLERLNFLGDVSENGLRQAHGLMVNYLYAPDEIEKNHEALAEKGVIAASPAVRKAHPGDASASGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN5</accession>
    <name>A0A2M9PBN5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Zinc peptidase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000683">
        <property type="protein sequence ID" value="PJN94945.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010359">
        <property type="entry name" value="IrrE_HExxH"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06114">
        <property type="entry name" value="Peptidase_M78"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peptidase_M78" evidence="1">
        <location>
            <begin position="7"/>
            <end position="54"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06114"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94945.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="69" mass="7648" checksum="D210C86D47E25E75" modified="2018-04-25" version="1" fragment="single">ARAYVKELEDEASWLGPALLVSEEAALHIVEQGWTAVEAGRRYGVSARLVKMRVQVTGAKTRLARRRVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBP4</accession>
    <name>A0A2M9PBP4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Apple domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11310</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000673">
        <property type="protein sequence ID" value="PJN94960.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005576">
        <property type="term" value="C:extracellular region"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01100">
        <property type="entry name" value="APPLE_Factor_XI_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000177">
        <property type="entry name" value="Apple"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003609">
        <property type="entry name" value="Pan_app"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14295">
        <property type="entry name" value="PAN_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00223">
        <property type="entry name" value="APPLE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50948">
        <property type="entry name" value="PAN"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014760841" description="Apple domain-containing protein" evidence="1">
        <location>
            <begin position="22"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="Apple" evidence="2">
        <location>
            <begin position="24"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="86"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50948"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94960.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="86" mass="9026" checksum="089196672E1F5433" modified="2018-04-25" version="1" fragment="single">MAKSVRFLILAALAASGLWTAAPAQEAPRRLIVERGVDFPGGDLRSIFSTSLPLCRDACLAEPACRAFTFNTAASACFLKAAPAGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC11</accession>
    <name>A0A2M9PC11_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10590</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000613">
        <property type="protein sequence ID" value="PJN95087.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="98"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95087.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="20840" checksum="1356CEF78B7E9446" modified="2018-04-25" version="1">MSPINPAPRPTPVVAALTRIQDAALRVDPAQSVADLVQETRAMRTMWQAALRAILAEFSTEDEARRYLASKDGRMVLQFAGFDGARLDRLSLQPLTDRADAHRDASEPARQARQEAREAATRRYLPVKLPKPGSHGDTVFRAAETLYKAHAKVSAGTVGKMLPHIPANTIGCCLTTWRKHRNYIGWDD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC26</accession>
    <name>A0A2M9PC26_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10440</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000603">
        <property type="protein sequence ID" value="PJN95105.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="70"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95105.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="9234" checksum="2A0CA624B71B1519" modified="2018-04-25" version="1" fragment="single">MARISNMPPASAADVQGTDSTYLYDANGARKDKRLTIDVLAEVVSDGLTVAPSSISTEGAAEGQALILTGGEWTPGTIPSGGDGGGSGDVAGPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC9</accession>
    <name>A0A2M9PCC9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Uroporphyrinogen_deCOase domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_09890</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000560">
        <property type="protein sequence ID" value="PJN95201.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004853">
        <property type="term" value="F:uroporphyrinogen decarboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006779">
        <property type="term" value="P:porphyrin-containing compound biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.210">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038071">
        <property type="entry name" value="UROD/MetE-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000257">
        <property type="entry name" value="Uroporphyrinogen_deCOase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01208">
        <property type="entry name" value="URO-D"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51726">
        <property type="entry name" value="SSF51726"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Uroporphyrinogen_deCOase" evidence="2">
        <location>
            <begin position="30"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01208"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95201.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="121" mass="12927" checksum="A0D496B2C2126AAA" modified="2018-04-25" version="1" fragment="single">QRRRVEADPEVEDHDDAEMHRIDPEGGDHRQEVEATGVDCVALDGSVDPDWAAREIQSKGCVQGNLDQLLLVTGGSALTEATRACVRAFSGGPHVFNLGHGITPDADPDNVSRMLDAVRGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCD4</accession>
    <name>A0A2M9PCD4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sulfurtransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09915</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000561">
        <property type="protein sequence ID" value="PJN95199.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95199.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5485" checksum="AFD215BFBAE48255" modified="2018-04-25" version="1" fragment="single">SLGLSRMYADDLEQLEAGMALYDAFYRWARDATDETHNWPAPGRPVAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ3</accession>
    <name>A0A2M9PCQ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Protocatechuate 3,4-dioxygenase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">pcaG</name>
        <name evidence="5" type="ORF">CNY89_09315</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the intradiol ring-cleavage dioxygenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000511">
        <property type="protein sequence ID" value="PJN95298.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008199">
        <property type="term" value="F:ferric iron binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0018578">
        <property type="term" value="F:protocatechuate 3,4-dioxygenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019439">
        <property type="term" value="P:aromatic compound catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03463">
        <property type="entry name" value="3_4-PCD_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000627">
        <property type="entry name" value="Intradiol_dOase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015889">
        <property type="entry name" value="Intradiol_dOase_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012786">
        <property type="entry name" value="Protocat_dOase_a"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00775">
        <property type="entry name" value="Dioxygenase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49482">
        <property type="entry name" value="SSF49482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02423">
        <property type="entry name" value="protocat_alph"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00083">
        <property type="entry name" value="INTRADIOL_DIOXYGENAS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0223">Dioxygenase</keyword>
    <keyword evidence="3" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="INTRADIOL_DIOXYGENAS" evidence="4">
        <location>
            <begin position="54"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007825"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022964"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS00083"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95298.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22875" checksum="0ADE0592AB88B19F" modified="2018-04-25" version="1">MVQPLNYLRETASQTAGPYVHIGLAPGAAGFKTFDQELGTDIAGPNAKGERIAVEGVVFDGTGSPLKDVLIEVWQANAAGVYPHPADRRSAEVEEGFRGWGRVISDFATGLWSFETVKPGVVSGRNGRPMAPHLNLWIVARGINIGLNTRMYFADETDANAADPVLNLIEQENRRPTLIARREERDGRPVYRFDIRLQGENETVFLDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCQ5</accession>
    <name>A0A2M9PCQ5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Head-tail adaptor protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000512">
        <property type="protein sequence ID" value="PJN95294.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.10.270">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008767">
        <property type="entry name" value="Phage_SPP1_head-tail_adaptor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038666">
        <property type="entry name" value="SSP1_head-tail_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05521">
        <property type="entry name" value="Phage_H_T_join"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01563">
        <property type="entry name" value="gp16_SPP1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95294.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="108" mass="11722" checksum="3524EF787002A486" modified="2018-04-25" version="1">MRSGKLSRVIVIERASTTITPAGTPSSVWTDHATLRAEVVRLSTAEVIRGLGGAVDERSLIIRTRFLAGLTNADRVRFDGRTYNIKEAIPIDGDRGLEMRAEAIEASA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCR3</accession>
    <name>A0A2M9PCR3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 7">Phosphoglycerate kinase</fullName>
            <ecNumber evidence="2 7">2.7.2.3</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">pgk</name>
        <name evidence="8" type="ORF">CNY89_09350</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 7">
            <text>(2R)-3-phosphoglycerate + ATP = (2R)-3-phospho-glyceroyl phosphate + ADP</text>
            <dbReference type="Rhea" id="RHEA:14801"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:57604"/>
            <dbReference type="ChEBI" id="CHEBI:58272"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="2.7.2.3"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the phosphoglycerate kinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.7.2.3" evidence="2 7"/>
    <dbReference type="EMBL" id="PHNO01000513">
        <property type="protein sequence ID" value="PJN95292.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004618">
        <property type="term" value="F:phosphoglycerate kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1260">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001576">
        <property type="entry name" value="Phosphoglycerate_kinase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015824">
        <property type="entry name" value="Phosphoglycerate_kinase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036043">
        <property type="entry name" value="Phosphoglycerate_kinase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11406">
        <property type="entry name" value="PTHR11406"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00162">
        <property type="entry name" value="PGK"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00477">
        <property type="entry name" value="PHGLYCKINASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53748">
        <property type="entry name" value="SSF53748"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 7 8" id="KW-0418">Kinase</keyword>
    <keyword evidence="4" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="308"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000642"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="RuleBase" id="RU000532"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95292.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="308" mass="32499" checksum="16AAA41FA193E4AE" modified="2018-04-25" version="1" fragment="single">MAWKTLDDLDLKGKVVLTRVDINVPVEAGRVTDATRIERIVPTIRDILAKGGKPVLLAHFDRPKGKVVPEMSLRQLVPALSEKLGVDVAFAEDCVGDKAAAAVEALPEGGVLLLENTRFHKEEEKNDPAFAAELARLGDVYCNDAFSAAHRAHASTEGVARLLPSCAGRLMQEELSALEKALATPERPVVAVVGGAKVSTKLDLLGNLVSRVDMIVIGGGMANTFLAAQGIKVGKSLCEHDLADTAREILADAKAKGCEIILPVDVVVAREFKANAASETVLADACPEDAMILDAGPASVVRVVEAFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD60</accession>
    <name>A0A2M9PD60_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">GSP_synth domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08405</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000445">
        <property type="protein sequence ID" value="PJN95452.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005494">
        <property type="entry name" value="GSPS_pre-ATP-grasp-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03738">
        <property type="entry name" value="GSP_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GSP_synth" evidence="1">
        <location>
            <begin position="12"/>
            <end position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03738"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95452.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="406" mass="44816" checksum="82D550FA61599AA4" modified="2018-04-25" version="1">MLRVALSERLDWKSKAEELGFHFHTMYGEPYWDETSAYVFTLGQIETDIEDASNALHAMCLDAVEAVVASEELMSRLGIPNGFHDFVATSWTRRDPALYGRLDLAYGGVGAAKLLEYNADTPTSLYEAASFQWLWLEDMRASGALPADADQFNGVHEAMVARFREMLAPGSDLHFTSAKGLDEDFATVEYMAWAAKEAGLVAHYVALEDIGVTTSGQFADGEDRVIGAMFKLYPWEDMLADPFGAHVPTARCRMFEPAWKALVSNKGILPVLWRMFEGHPNLLPAFFEDDFTRGDRDVAARIARADVAFERGRVVKPIFSREGASVDIVTGDPALGPDGRIAAADRSYDMHPKIVQAYAPLPNMGGMFPVLGAWMVGDACVGLGVREDASRITQNLSRFKPHFVRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD85</accession>
    <name>A0A2M9PD85_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">BMP family ABC transporter substrate-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_08235</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the BMP lipoprotein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000432">
        <property type="protein sequence ID" value="PJN95484.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003760">
        <property type="entry name" value="PnrA-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02608">
        <property type="entry name" value="Bmp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="3">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014864142" evidence="3">
        <location>
            <begin position="23"/>
            <end position="333"/>
        </location>
    </feature>
    <feature type="domain" description="Bmp" evidence="4">
        <location>
            <begin position="29"/>
            <end position="322"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008610"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF02608"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95484.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="35017" checksum="3AF6A9A9CADA0917" modified="2018-04-25" version="1">MTFAKTFVALTVVVASALPALAQDAGPAVIFDRGGKFDKSFNEASYNGAERFKAETGVGYAEFEIREDAQREQALRRFAERGNSPIVVAGFSNATAMQTVAAEFPETEFAIIDAVVDLPNVRSVIFKEHEGSYLVGVLGAMASKSGKVGFVGGMDIPLIQKFACGYVQGVKATNPKAEVFQNMTGNTPEAWNDRPRGAEIARSQIDRGADVIYHAAGGTGIGVLEAAADAGVLGIGVDSNQNGLHPGKVLTSMLKRVDNAVYDALTDAHGDEWTSGVVVMGLKEDGVGWALDENNAALITPEMQAAADEARAKIISGEIVVHDYSTDGACPAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA2</accession>
    <name>A0A2M9PDA2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">NBD_C domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07990</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000416">
        <property type="protein sequence ID" value="PJN95521.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.980.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR031475">
        <property type="entry name" value="NBD_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042213">
        <property type="entry name" value="NBD_C_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17042">
        <property type="entry name" value="NBD_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NBD_C" evidence="1">
        <location>
            <begin position="4"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF17042"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95521.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="7794" checksum="5AFB0C0B8F61A3D5" modified="2018-04-25" version="1" fragment="single">LFGCGGETADAILGVLGVGVLAVEGEILPGVPVSRMTVDGREIRLATKSGGFGGPETLVSLVDAAAELVEESGEEPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDB8</accession>
    <name>A0A2M9PDB8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Thiol reductase thioredoxin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07890</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000409">
        <property type="protein sequence ID" value="PJN95540.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00085">
        <property type="entry name" value="Thioredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="1">
        <location>
            <begin position="38"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="70"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00085"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95540.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="70" mass="7560" checksum="67E5DE6D866DCF62" modified="2018-04-25" version="1" fragment="single">MKLTCFECGQVNRVPEERLAAGPKCGVCGAKLADGKVRALDPATLDKAARNDELPLVVDFWAPWCGPCRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDH1</accession>
    <name>A0A2M9PDH1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07770</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000399">
        <property type="protein sequence ID" value="PJN95558.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002577">
        <property type="entry name" value="HTH_HxlR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01638">
        <property type="entry name" value="HxlR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51118">
        <property type="entry name" value="HTH_HXLR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH hxlR-type" evidence="2">
        <location>
            <begin position="15"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="112"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="121"/>
            <end position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51118"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95558.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16693" checksum="188EBACEF0CB94CB" modified="2018-04-25" version="1">MAKARRSRFDCTPGCAVEAAIGLIDGKWKAIILWRLLSGTLRFNEIRRHVAHCTPQMRTNQLRELEEDGLVVRKVYAQVPPKVEYSLSDLGRSLEPILHALKDWGDANIGLYGKPTGHDPREAAGGLRRQEPQERSRDAEASLPEAAVR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK2</accession>
    <name>A0A2M9PDK2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07330</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000368">
        <property type="protein sequence ID" value="PJN95631.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014967970" evidence="2">
        <location>
            <begin position="27"/>
            <end position="185"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="154"/>
            <end position="185"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95631.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="185" mass="19614" checksum="354090ACC75910EC" modified="2018-04-25" version="1">MSRILIPLLACLFGGAAALAALPVIAADYDLDCAVILCLAAGFPAEPSGTCAEAFEHMIDRITDTPPKSPVGVCGASDGSEYAPAQVLFSQPSRQSRLGWICPDPSPMRFSERVDYTLAAPVCYPDAEHVPLVVQGGSGYWFLGARSRQSVSSTVSRSPCLPTATLRRSSRRSISRTPAQASRGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDM8</accession>
    <name>A0A2M9PDM8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Molybdopterin molybdenumtransferase MoeA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07485</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000378">
        <property type="protein sequence ID" value="PJN95608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032324">
        <property type="term" value="P:molybdopterin cofactor biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.340.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005111">
        <property type="entry name" value="MoeA_C_domain_IV"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036688">
        <property type="entry name" value="MoeA_C_domain_IV_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03454">
        <property type="entry name" value="MoeA_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63867">
        <property type="entry name" value="SSF63867"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="MoeA_C" evidence="1">
        <location>
            <begin position="3"/>
            <end position="68"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03454"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7844" checksum="C16AFEE1EB40F537" modified="2018-04-25" version="1" fragment="single">PARLVGALGANGPRAQYLRAMVEWKDGWRCAPFGRQDSSLLSVLASANALMVRPPDDAALCDGDDVEFVWIR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDZ8</accession>
    <name>A0A2M9PDZ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000312">
        <property type="protein sequence ID" value="PJN95769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="49" mass="5457" checksum="54667FDBE16F36E8" modified="2018-04-25" version="1" fragment="single">VVRKGGSPNRWLAALVARKPKMVAAVALANKMARMIWAVTTKQEDYRMA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE02</accession>
    <name>A0A2M9PE02_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06710</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000323">
        <property type="protein sequence ID" value="PJN95743.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="161"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95743.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="272" mass="30658" checksum="D128B9DDEE089BFB" modified="2018-04-25" version="1">MLIRYGYEITLTCQTPTHMVCLLAVRDDRAADLRGPEKLTTTPEVALSSYHDLFGNRCLRFTAPAGDTTIVGDAVIEDSGLHDPVLPHLRETPLEELPDDSLVFLMGSRYCETDKLSQAAWDLFGNIEPGWGRVQAICDFVHNHIKFDYQQARATRTAYEAYQEGIGVCRDFAHLAVAFCRCLNIPARYVNGHMGDIGVPVVDPMDFSAWMEVWLDGGWRTFDPRNNIPRIGRIVVARGRDAADVPLVNSFGPHFLKTFKVWTYEVELKPKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE60</accession>
    <name>A0A2M9PE60_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Fructose-bisphosphatase</fullName>
            <ecNumber evidence="3">3.1.3.11</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_06150</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>beta-D-fructose 1,6-bisphosphate + H2O = beta-D-fructose 6-phosphate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:11064"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:32966"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57634"/>
            <dbReference type="EC" id="3.1.3.11"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the FBPase class 1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.11" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000288">
        <property type="protein sequence ID" value="PJN95835.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0042132">
        <property type="term" value="F:fructose 1,6-bisphosphate 1-phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005975">
        <property type="term" value="P:carbohydrate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00354">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01855">
        <property type="entry name" value="FBPase_class1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR044015">
        <property type="entry name" value="FBPase_C_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000146">
        <property type="entry name" value="FBPase_class-1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033391">
        <property type="entry name" value="FBPase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028343">
        <property type="entry name" value="FBPtase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11556">
        <property type="entry name" value="PTHR11556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00316">
        <property type="entry name" value="FBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF18913">
        <property type="entry name" value="FBPase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF500210">
        <property type="entry name" value="FBPtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000904">
        <property type="entry name" value="FBPtase_SBPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00115">
        <property type="entry name" value="F16BPHPHTASE"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0119">Carbohydrate metabolism</keyword>
    <keyword evidence="4 6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="FBPase" evidence="7">
        <location>
            <begin position="6"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="domain" description="FBPase_C" evidence="8">
        <location>
            <begin position="140"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001273"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010941"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013093"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023277"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU000508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF18913"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95835.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31673" checksum="E9F06E3DAA199550" modified="2018-04-25" version="1" fragment="single">LDEARGENADGDDQKALDLIADAAFLAALPGSGVRFYASEEQEAAIELDPSGGLALAIDPLDGSSNIAVNVSIGTIFAIYPAAETAEASFLRPGREMVGAGYVIYGPQCCLMVSFGAGVQKYLLDPDAGRWHLVGDNLELPAKSSEFAINASNYRHWLKPVRAYVDDCIAGAEGPRERNFNMRWIASLVAETHRILTRGGVFLYPADARKGYERGRLRLAYECAPIAFLIEQAGGQATDGIDAILDRAPAHLHERTPFVFGSPVNVARVSAYHDLPEAETAALFGSRGLFRSRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE97</accession>
    <name>A0A2M9PE97_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06140</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000287">
        <property type="protein sequence ID" value="PJN95842.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd08054">
        <property type="entry name" value="gp6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021146">
        <property type="entry name" value="Phafe_gp6_head-tail"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011738">
        <property type="entry name" value="Phage_CHP"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02215">
        <property type="entry name" value="phage_chp_gp8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95842.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="20296" checksum="B455AC8BB5FB7AEB" modified="2018-04-25" version="1">MSKPGQAMHLRCVTPPEDPPVTLAQAKAWLHLDGEDENALVLGLIAAAAGHLDGPKGVLRRALEPQTWEMTLDGFSDPIRLPLGPVVSVTSIAWEDVAGATHALASSAWRLRHDARGAFLAPVSSWPSGVLSVTVEWVAGEGCPEPVRHAILMLVAHYYANREAVGAGGAGAAALVELPLGVAKLIAPWKVFT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED6</accession>
    <name>A0A2M9PED6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Competence domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_05735</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000263">
        <property type="protein sequence ID" value="PJN95905.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004477">
        <property type="entry name" value="ComEC_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03772">
        <property type="entry name" value="Competence"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00360">
        <property type="entry name" value="ComEC_N-term"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="118"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="156"/>
            <end position="174"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="202"/>
            <end position="219"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="295"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="326"/>
            <end position="347"/>
        </location>
    </feature>
    <feature type="domain" description="Competence" evidence="7">
        <location>
            <begin position="97"/>
            <end position="349"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="355"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF03772"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95905.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="355" mass="38213" checksum="AC3A6733C113FB66" modified="2018-04-25" version="1" fragment="single">MVGFSFVVVRLWISALPVRFGRSRPGLPTGNAPRIDFRRLAWFDRLGAVGYTKSPMVEIEGGDPSALGLLAFRWRMALSRHIQAQVPGQDGAFSAAILTGDRSGIDPAVERDLRISTLYHLVSISGLHMTLIAAAVFVFVRYGLAAVPGLALRLPLKKIAAAIALAAGFGYLWISGFEVAAQRAYIMTACFLVAVLIDRPALTLRSVALAAMIVLAFSPESLMEAGFQMSFAATIGLISAFEALRRQGWWMALQTDPRWRFVKPVIACAMTSLVAGTATAPFSAFHFNLMAQYGLLANLLAVPMMGAVVMPAAVIGLALAPLGLDWLAFTIMGWGVAYVLAVAKFVANLGARRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEL7</accession>
    <name>A0A2M9PEL7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6 7">50S ribosomal protein L9</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rplI</name>
        <name evidence="10" type="ORF">CNY89_05550</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Binds to the 23S rRNA.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 7">Belongs to the bacterial ribosomal protein bL9 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000252">
        <property type="protein sequence ID" value="PJN95934.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019843">
        <property type="term" value="F:rRNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.430.100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.5.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00503">
        <property type="entry name" value="Ribosomal_L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000244">
        <property type="entry name" value="Ribosomal_L9"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009027">
        <property type="entry name" value="Ribosomal_L9/RNase_H1_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020594">
        <property type="entry name" value="Ribosomal_L9_bac/chp"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020069">
        <property type="entry name" value="Ribosomal_L9_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036791">
        <property type="entry name" value="Ribosomal_L9_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020070">
        <property type="entry name" value="Ribosomal_L9_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036935">
        <property type="entry name" value="Ribosomal_L9_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21368">
        <property type="entry name" value="PTHR21368"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03948">
        <property type="entry name" value="Ribosomal_L9_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01281">
        <property type="entry name" value="Ribosomal_L9_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55653">
        <property type="entry name" value="SSF55653"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55658">
        <property type="entry name" value="SSF55658"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00158">
        <property type="entry name" value="L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00651">
        <property type="entry name" value="RIBOSOMAL_L9"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0175">Coiled coil</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5 7" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="4 7 10" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="3 7" id="KW-0694">RNA-binding</keyword>
    <keyword evidence="2 7" id="KW-0699">rRNA-binding</keyword>
    <feature type="domain" description="RIBOSOMAL_L9" evidence="9">
        <location>
            <begin position="13"/>
            <end position="40"/>
        </location>
    </feature>
    <feature type="coiled-coil region" evidence="8">
        <location>
            <begin position="42"/>
            <end position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022730"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00029520"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00503"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="Coils"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS00651"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95934.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="192" mass="20588" checksum="2B079C99AD7BE07B" modified="2018-04-25" version="1">MEVVLLERVAKLGQMGEVVNVKQGYARNFLLPQGKALRATPANMKRFEVDRAQLEARNLEAKGEAEKVSAKLDGQAFVVIRSASDGGALYGSVTTRDVAEAATADGFSLDRRQVALNAPIKELGLHQVQVTLHPEVVATIVVNVARSNEEAAMQASGKTIQQLQAEADAEAEFDIQELFDDIGGAAEGADER</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEN3</accession>
    <name>A0A2M9PEN3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Bifunctional (P)ppGpp synthetase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05125</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the RelA/SpoT family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000229">
        <property type="protein sequence ID" value="PJN96005.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015969">
        <property type="term" value="P:guanosine tetraphosphate metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00077">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd05399">
        <property type="entry name" value="NT_Rel-Spo_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.460.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003607">
        <property type="entry name" value="HD/PDEase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006674">
        <property type="entry name" value="HD_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043519">
        <property type="entry name" value="NT_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007685">
        <property type="entry name" value="RelA_SpoT"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04607">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00471">
        <property type="entry name" value="HDc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00954">
        <property type="entry name" value="RelA_SpoT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81301">
        <property type="entry name" value="SSF81301"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51831">
        <property type="entry name" value="HD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HD" evidence="2">
        <location>
            <begin position="45"/>
            <end position="144"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="387"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00007476"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS51831"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96005.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="387" mass="43907" checksum="313D285CBC6833E8" modified="2018-04-25" version="1" fragment="single">MIPVETLTSVVRSYNPRSDSGLIAAAYDYGRRMHSSQKRSSGEPYFSHPVAVAMLLAEQRLDDATIVTALLHDTIEDTGSTYSEISLRFGEEIAQLVDGVTKLTNLQLGSATNAQAENFRKLLMAMSKDLRVLLVKLADRLHNMRTIKHLAVEKQIRKARETMDIFAPLAGRMGMQWMREELEDISFRILNPDARSSIIRRFVTLRSESGDVIPQITEDIGAALAAAGVEASVFGREKKPYSVWRKMEEKKEGFSRLSDIYGFRIVTDSVEDCYVALGAVHRRWMAVPSRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTQEMHTVAETGVAAHWSYKDGQRFQNPFAVDPFKWLSDVTKRLDDEDDSADFLEHMKLEMFTDQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF07</accession>
    <name>A0A2M9PF07_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04300</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000184">
        <property type="protein sequence ID" value="PJN96140.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="94"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96140.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10345" checksum="A5950838091289B9" modified="2018-04-25" version="1" fragment="single">MSLAGLEQPDLVTTRLRLRRLVPADAALVHLYASDARVATMTTSIPHPNPEGASEAFVQRVHSLASPFWQGRLERLISSSPTRSRIWASSPIRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF56</accession>
    <name>A0A2M9PF56_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04160</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000177">
        <property type="protein sequence ID" value="PJN96169.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011231">
        <property type="entry name" value="Phage_VT1-Sakai_H0018"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09956">
        <property type="entry name" value="DUF2190"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF030771">
        <property type="entry name" value="UCP030771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96169.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="111" mass="11245" checksum="B21CCCEC5EEA52BD" modified="2018-04-25" version="1">MKTYVQPGNTITLTAPYAVASGDGLLVGSIFGIAAGAAALGEPVETALVGVFDITKVGSQAWTVGARVYWDDTNKRTTTVATDNTLIGVAVEAVASGAGDTIGRVRLNAAF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF81</accession>
    <name>A0A2M9PF81_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Metal-transporting ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_03915</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000166">
        <property type="protein sequence ID" value="PJN96207.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1000">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023299">
        <property type="entry name" value="ATPase_P-typ_cyto_dom_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023298">
        <property type="entry name" value="ATPase_P-typ_TM_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036412">
        <property type="entry name" value="HAD-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023214">
        <property type="entry name" value="HAD_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001757">
        <property type="entry name" value="P_typ_ATPase"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00120">
        <property type="entry name" value="HATPASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56784">
        <property type="entry name" value="SSF56784"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81665">
        <property type="entry name" value="SSF81665"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01494">
        <property type="entry name" value="ATPase_P-type"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3 4" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1 4" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2 4" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="182"/>
            <end position="202"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="208"/>
            <end position="225"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="246"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="288"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="321"/>
            <end position="343"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="4">
        <location>
            <begin position="355"/>
            <end position="374"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96207.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="387" mass="41502" checksum="9A2E26B31EDEEA2F" modified="2018-04-25" version="1" fragment="single">LGAASSEDGGATWKLLGLLPLLDPPRPDAKETIARTKALGLSVKMVTGDDVAIGAEIAAQLGMGPNLLVAGDVFPKGTDPDHIPTASIQAVERADGFGRVFPEHKYEIVKALQQGGHIVAMTGDGVNDSPALKQADCGIAVSGATDAARSAAAVILTAPGLSTIVSAINESRQIFERINAYVYYRIAMTIAIMVVVVLSSVIFDIQPLTAIMVVVLALLDDIPIMTIAYDRVRTAPKPLRWDMHHILVFSILMGILATAQSFGIVLIGMEWMRDAALQARFPLDASHLQTMLFLQLAAGGHMLLFVVRTRASIVFAPYPSWPLFGAIVATQVVAVLMCAYGALVTALPWDLIGFVWVYVIAWTVLTDLAKLAYYRYGPPSRADRPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD7</accession>
    <name>A0A2M9PFD7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03680</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000154">
        <property type="protein sequence ID" value="PJN96248.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="35"/>
            <end position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96248.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7511" checksum="85E84870759DB9E3" modified="2018-04-25" version="1">MVLNLAESLTLSVTAAVASCGLAMASGGGILLGVAAYVVVGSITLISACSISAVEERVRVARALRETKKERAYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFF7</accession>
    <name>A0A2M9PFF7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">Leucyl/phenylalanyl-tRNA--protein transferase</fullName>
            <ecNumber evidence="4">2.3.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="4">L/F-transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Leucyltransferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="4">Phenyalanyltransferase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="4" type="primary">aat</name>
        <name evidence="5" type="ORF">CNY89_03845</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4">Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-arginyl-[protein] = H(+) + N-terminal L-leucyl-L-arginyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:50416"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12672"/>
            <dbReference type="Rhea" id="RHEA-COMP:12673"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:64719"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133044"/>
            <dbReference type="EC" id="2.3.2.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>L-leucyl-tRNA(Leu) + N-terminal L-lysyl-[protein] = H(+) + N-terminal L-leucyl-L-lysyl-[protein] + tRNA(Leu)</text>
            <dbReference type="Rhea" id="RHEA:12340"/>
            <dbReference type="Rhea" id="RHEA-COMP:9613"/>
            <dbReference type="Rhea" id="RHEA-COMP:9622"/>
            <dbReference type="Rhea" id="RHEA-COMP:12670"/>
            <dbReference type="Rhea" id="RHEA-COMP:12671"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:65249"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78494"/>
            <dbReference type="ChEBI" id="CHEBI:133043"/>
            <dbReference type="EC" id="2.3.2.6"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="4">
            <text>an N-terminal L-alpha-aminoacyl-[protein] + L-phenylalanyl-tRNA(Phe) = an N-terminal L-phenylalanyl-L-alpha-aminoacyl-[protein] + tRNA(Phe)</text>
            <dbReference type="Rhea" id="RHEA:43632"/>
            <dbReference type="Rhea" id="RHEA-COMP:9668"/>
            <dbReference type="Rhea" id="RHEA-COMP:9699"/>
            <dbReference type="Rhea" id="RHEA-COMP:10636"/>
            <dbReference type="Rhea" id="RHEA-COMP:10637"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78531"/>
            <dbReference type="ChEBI" id="CHEBI:78597"/>
            <dbReference type="ChEBI" id="CHEBI:83561"/>
            <dbReference type="EC" id="2.3.2.6"/>
        </reaction>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="4">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the L/F-transferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.2.6" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000162">
        <property type="protein sequence ID" value="PJN96224.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008914">
        <property type="term" value="F:leucyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030163">
        <property type="term" value="P:protein catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.630.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00688">
        <property type="entry name" value="Leu_Phe_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016181">
        <property type="entry name" value="Acyl_CoA_acyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004616">
        <property type="entry name" value="Leu/Phe-tRNA_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042203">
        <property type="entry name" value="Leu/Phe-tRNA_Trfase_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30098">
        <property type="entry name" value="PTHR30098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03588">
        <property type="entry name" value="Leu_Phe_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55729">
        <property type="entry name" value="SSF55729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00667">
        <property type="entry name" value="aat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 4" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1 4" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 4 5" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00688"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96224.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="24040" checksum="5EA22163C739F630" modified="2018-04-25" version="1">MKDEPNIEITPALLLRAYASGVFPMADSAHSSDLSWIDPSRRGVLPLDGLHVPRRLARSFLTADVEVVIDRDFSGVLDGCADRTETWINPEIRRLYLALHRTGQAHSVEIRQGGLLVGGLYGVAIGAAFFGESMFSRVRDASKFALIALIARLRAGGFTLLDTQFVTPHLMRLGAVEISRREYQRRLKAALARPAEFRALPRDTSRQELLQLSAQTS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK3</accession>
    <name>A0A2M9PFK3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">IS630 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_03345</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000134">
        <property type="protein sequence ID" value="PJN96308.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038717">
        <property type="entry name" value="Tc1-like_DDE_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13358">
        <property type="entry name" value="DDE_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0814">Transposable element</keyword>
    <feature type="domain" description="DDE_3" evidence="2">
        <location>
            <begin position="2"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13358"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96308.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="7571" checksum="66A8F6F8B4E02767" modified="2018-04-25" version="1" fragment="single">ARVLYLPPYSPDFNPIEKAFAKLKALLRKAAERTVEGLWRAIGRLVDLITPAEARNYFESCRYDAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFK4</accession>
    <name>A0A2M9PFK4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">CTP synthase</fullName>
            <ecNumber evidence="9">6.3.4.2</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Cytidine 5'-triphosphate synthase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">Cytidine triphosphate synthetase</fullName>
            <shortName evidence="9">CTP synthetase</shortName>
            <shortName evidence="9">CTPS</shortName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="9">UTP--ammonia ligase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">pyrG</name>
        <name evidence="12" type="ORF">CNY89_03645</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + H2O + L-glutamine + UTP = ADP + CTP + 2 H(+) + L-glutamate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:26426"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.4.2"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>ATP + NH4(+) + UTP = ADP + CTP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:16597"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46398"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>H2O + L-glutamine = L-glutamate + NH4(+)</text>
            <dbReference type="Rhea" id="RHEA:15889"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:28938"/>
            <dbReference type="ChEBI" id="CHEBI:29985"/>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </reaction>
    </comment>
    <comment type="activity regulation">
        <text evidence="9">Allosterically activated by GTP, when glutamine is the substrate; GTP has no effect on the reaction when ammonia is the substrate. The allosteric effector GTP functions by stabilizing the protein conformation that binds the tetrahedral intermediate(s) formed during glutamine hydrolysis. Inhibited by the product CTP, via allosteric rather than competitive inhibition.</text>
    </comment>
    <comment type="pathway">
        <text evidence="2 9">Pyrimidine metabolism; CTP biosynthesis via de novo pathway; CTP from UDP: step 2/2.</text>
    </comment>
    <comment type="subunit">
        <text evidence="9">Homotetramer.</text>
    </comment>
    <comment type="miscellaneous">
        <text evidence="9">CTPSs have evolved a hybrid strategy for distinguishing between UTP and CTP. The overlapping regions of the product feedback inhibitory and substrate sites recognize a common feature in both compounds, the triphosphate moiety. To differentiate isosteric substrate and product pyrimidine rings, an additional pocket far from the expected kinase/ligase catalytic site, specifically recognizes the cytosine and ribose portions of the product inhibitor.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the CTP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.4.2" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000152">
        <property type="protein sequence ID" value="PJN96254.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00159">
        <property type="reaction ID" value="UER00277"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003883">
        <property type="term" value="F:CTP synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0044210">
        <property type="term" value="P:'de novo' CTP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006541">
        <property type="term" value="P:glutamine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03113">
        <property type="entry name" value="CTPS_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="CDD" id="cd01746">
        <property type="entry name" value="GATase1_CTP_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01227">
        <property type="entry name" value="PyrG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004468">
        <property type="entry name" value="CTP_synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017456">
        <property type="entry name" value="CTP_synthase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033828">
        <property type="entry name" value="GATase1_CTP_Synthase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11550">
        <property type="entry name" value="PTHR11550"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06418">
        <property type="entry name" value="CTP_synth_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00337">
        <property type="entry name" value="PyrG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="7 9" id="KW-0315">Glutamine amidotransferase</keyword>
    <keyword evidence="4 9" id="KW-0436">Ligase</keyword>
    <keyword evidence="9" id="KW-0460">Magnesium</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8 9" id="KW-0665">Pyrimidine biosynthesis</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="CTP_synth_N" evidence="11">
        <location>
            <begin position="3"/>
            <end position="264"/>
        </location>
    </feature>
    <feature type="domain" description="GATase" evidence="10">
        <location>
            <begin position="301"/>
            <end position="539"/>
        </location>
    </feature>
    <feature type="region of interest" description="Amidoligase domain" evidence="9">
        <location>
            <begin position="1"/>
            <end position="265"/>
        </location>
    </feature>
    <feature type="region of interest" description="L-glutamine binding" evidence="9">
        <location>
            <begin position="382"/>
            <end position="385"/>
        </location>
    </feature>
    <feature type="active site" description="Nucleophile; for glutamine hydrolysis" evidence="9">
        <location>
            <position position="381"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="520"/>
        </location>
    </feature>
    <feature type="active site" evidence="9">
        <location>
            <position position="522"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="13"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="14"/>
            <end position="19"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="139"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="146"/>
            <end position="148"/>
        </location>
        <ligand>
            <name>CTP</name>
            <dbReference type="ChEBI" id="CHEBI:37563"/>
            <note>allosteric inhibitor</note>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <begin position="186"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="222"/>
        </location>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="240"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="354"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="405"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="9">
        <location>
            <position position="475"/>
        </location>
        <ligand>
            <name>L-glutamine</name>
            <dbReference type="ChEBI" id="CHEBI:58359"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000314"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00005171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007533"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022962"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01227"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="Pfam" id="PF06418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN96254.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="548" mass="60649" checksum="9B465623334C410F" modified="2018-04-25" version="1">MARYVFITGGVVSSLGKGLASAALGALLQARGYSVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVAARRTDSISSGRIYSNVLEKERRGDYLGKTIQVIPHVTNEIKDFLRVGEDEVDFMLCEIGGTVGDIEGLPFFEAIRQFGQDKPRGQCIYMHLTLLPYMAASGELKTKPTQHSVKELRAIGIAPDVLVCRSEMPIPPKERDKLALFCNVRPEAVIAAQDLKSIYEAPLAYHREGLDQAVLDAFGISPAPKPNLAKWEDVVDRIMNPEGEVKVAIVGKYTQLEDAYKSIAEGLTHGGIANRVKVRAQWLDSELFERTDDVASHLEGYNAIVVPGGFGERGTEGKIRAAEFARTRQVPYLGICLGMQMAVIEASRNLAGLADAGSEEFDHEAGERRFTPVIYHLKEWLEGNRTVQRSVEDDKGGTMRLGAYDAILSPGSQVAQIYDATVISERHRHRYEVDIAYRERLESCGLSFSGLSPDGRLPEIVEMPGHPWYIGVQFHPELKSKPFAPHPLFADFVRAALAQSRLF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFP5</accession>
    <name>A0A2M9PFP5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribulose-bisphosphate carboxylase large subunit</fullName>
            <ecNumber evidence="7">4.1.1.39</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">rbcL</name>
        <name evidence="7" type="ORF">CNY89_02950</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="4">Belongs to the RuBisCO large chain family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.1.1.39" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000116">
        <property type="protein sequence ID" value="PJN96366.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016984">
        <property type="term" value="F:ribulose-bisphosphate carboxylase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015977">
        <property type="term" value="P:carbon fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.110">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033966">
        <property type="entry name" value="RuBisCO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020878">
        <property type="entry name" value="RuBisCo_large_chain_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000685">
        <property type="entry name" value="RuBisCO_lsu_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036376">
        <property type="entry name" value="RuBisCO_lsu_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017443">
        <property type="entry name" value="RuBisCO_lsu_fd_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036422">
        <property type="entry name" value="RuBisCO_lsu_N_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42704">
        <property type="entry name" value="PTHR42704"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00016">
        <property type="entry name" value="RuBisCO_large"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02788">
        <property type="entry name" value="RuBisCO_large_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00014">
        <property type="entry name" value="RuBisCO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51649">
        <property type="entry name" value="SSF51649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54966">
        <property type="entry name" value="SSF54966"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00157">
        <property type="entry name" value="RUBISCO_LARGE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0456">Lyase</keyword>
    <keyword evidence="3" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RuBisCO_large_N" evidence="6">
        <location>
            <begin position="25"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="domain" description="RuBisCO_large" evidence="5">
        <location>
            <begin position="155"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003834"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF02788"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96366.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="332" mass="37378" checksum="F8E7C58FB07F7E37" modified="2018-04-25" version="1" fragment="single">MTEMKEIKGKERYKAGVLKYAQMGYWDGDYEPKDTDVLALFRITPQDGVDPIEAAAAVAGESSTATWTVVWTDRLTACDQYRAKAYKVDPVPGRPGEFFCYVAYDLILFEEGSIANLTASIIGNVFSFKPLKAARLEDMRMPVAYVKTYKGPPTGIVVERERLDKFGRPLLGATTKPKLGLSGKNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNRATAETGEMKGHYLNITAGTMEEMYRRAEFAKELGSVIVMIDLVIGYTAIQSISEWCRQNDMILHLHRAGHGTYTRQKKHGISFRVIAKWMRLAGVDHIHAGTAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFS2</accession>
    <name>A0A2M9PFS2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000113">
        <property type="protein sequence ID" value="PJN96378.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002823">
        <property type="entry name" value="DUF112_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01970">
        <property type="entry name" value="TctA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="50"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="105"/>
            <end position="133"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="145"/>
            <end position="161"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="168"/>
            <end position="189"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="255"/>
            <end position="279"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="313"/>
            <end position="331"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="352"/>
            <end position="378"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="384"/>
            <end position="404"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="411"/>
            <end position="440"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="467"/>
            <end position="487"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96378.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="497" mass="51823" checksum="4145B5B985F9E286" modified="2018-04-25" version="1">MFDAFLNGFALASSWQNLGFAFVGCLLGTLIGVLPGVGPLATVSMLLSMTIYLDPLSSLVMLAGIFYGAQYGGSTTAILCNLPGEASAVVTVLDGHQMARKGRAGAALSVAALASLFAGVTATLVIALFAPILSTFALRFNAPEYFVLMMLGLFAAVVFSGGAMSKSLAMAGIGVLLGTIGTDIEAGAARFTFGFPQLSEGLGIVALSMGLFGLSEIIMNISKADSRDVLKAKIGLLWPTREEARRAAPAAVRGTIIGSLLGVLPGGGVTLSTFAAYMFEQKVSRRPQEFGKGAVEGLAAPEAANNAAAQTSFIPLLTLGIPTTPTLALMLGAMIMQGIQPGPQVMTTRPDLFWGLIASMLIGNIMLVIINLPLVGVWVQLLRVPYRVLFPVILTICCIGAYAMEFSVVDLIALSVFAGGGVLLAALGFPPVPLLLGFILGPLAEENLRRAMAISGGDATVFLTRPISAAMVLMIVALVAVVTLPMFRRNREVFEEQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFU8</accession>
    <name>A0A2M9PFU8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Cupin</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02610</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000101">
        <property type="protein sequence ID" value="PJN96430.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017102">
        <property type="entry name" value="UCP037087"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF037087">
        <property type="entry name" value="UCP037087"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="2">
        <location>
            <begin position="45"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="22"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96430.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="137" mass="14649" checksum="2CEF1D2C0EB6B823" modified="2018-04-25" version="1">MDRRGQRQRRPPQGPGETYAGKQGFDYAAGVSAESAGATGICMHLLTIPPGGRAKAHMHASHETAIYMLSGVTEMHYGSRLENHMVVKAGEMLYIPAGMPHLPLNPGPEPASAVIARTDPNEQESVVLLPELEALVP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG77</accession>
    <name>A0A2M9PG77_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Inorganic pyrophosphatase</fullName>
            <ecNumber evidence="5">3.6.1.1</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="5">Pyrophosphate phospho-hydrolase</fullName>
            <shortName evidence="5">PPase</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="5" type="primary">ppa</name>
        <name evidence="6" type="ORF">CNY89_02005</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="5">
            <text>diphosphate + H2O = H(+) + 2 phosphate</text>
            <dbReference type="Rhea" id="RHEA:24576"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="EC" id="3.6.1.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 5">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="subunit">
        <text evidence="5">Homohexamer.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the PPase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.6.1.1" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000073">
        <property type="protein sequence ID" value="PJN96529.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004427">
        <property type="term" value="F:inorganic diphosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000287">
        <property type="term" value="F:magnesium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006796">
        <property type="term" value="P:phosphate-containing compound metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00412">
        <property type="entry name" value="pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.80.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00209">
        <property type="entry name" value="Inorganic_PPase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008162">
        <property type="entry name" value="Pyrophosphatase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036649">
        <property type="entry name" value="Pyrophosphatase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10286">
        <property type="entry name" value="PTHR10286"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00719">
        <property type="entry name" value="Pyrophosphatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50324">
        <property type="entry name" value="SSF50324"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="3 5" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 5" id="KW-0460">Magnesium</keyword>
    <keyword evidence="2 5" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="binding site" evidence="5">
        <location>
            <position position="33"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="47"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="59"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="69"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="106"/>
        </location>
        <ligand>
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
            <label>1</label>
        </ligand>
    </feature>
    <feature type="binding site" evidence="5">
        <location>
            <position position="145"/>
        </location>
        <ligand>
            <name>substrate</name>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022842"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN96529.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="19591" checksum="EFE6EA75F677221F" modified="2018-04-25" version="1">MNIDKIPAGKNPPQDINVVIEITGGAAGGAPVKYEIDKESGAVFVDRIVNTPMFYPCNYGFVPNTLHADGDPTDVLVLCDFPLAPGVVIRCRPVGVLKMEDDGGMDDKLIAVPVEKVDPFQAGIKDLEDIAQKTRDRIKHFFEHYKDLEAGKWVKVIGWGDKAEAEAILTTSLEAIKAKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE9</accession>
    <name>A0A2M9PGE9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 9">Serine acetyltransferase</fullName>
            <ecNumber evidence="4 9">2.3.1.30</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">cysE</name>
        <name evidence="11" type="ORF">CNY89_01410</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>acetyl-CoA + L-serine = CoA + O-acetyl-L-serine</text>
            <dbReference type="Rhea" id="RHEA:24560"/>
            <dbReference type="ChEBI" id="CHEBI:33384"/>
            <dbReference type="ChEBI" id="CHEBI:57287"/>
            <dbReference type="ChEBI" id="CHEBI:57288"/>
            <dbReference type="ChEBI" id="CHEBI:58340"/>
            <dbReference type="EC" id="2.3.1.30"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 9">Belongs to the transferase hexapeptide repeat family.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.3.1.30" evidence="4 9"/>
    <dbReference type="EMBL" id="PHNO01000048">
        <property type="protein sequence ID" value="PJN96633.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00136">
        <property type="reaction ID" value="UER00199"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009001">
        <property type="term" value="F:serine O-acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006535">
        <property type="term" value="P:cysteine biosynthetic process from serine"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03354">
        <property type="entry name" value="LbH_SAT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3130.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018357">
        <property type="entry name" value="Hexapep_transf_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045304">
        <property type="entry name" value="LbH_SAT"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010493">
        <property type="entry name" value="Ser_AcTrfase_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042122">
        <property type="entry name" value="Ser_AcTrfase_N_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005881">
        <property type="entry name" value="Ser_O-AcTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06426">
        <property type="entry name" value="SATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000441">
        <property type="entry name" value="CysE"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="SMART" id="SM00971">
        <property type="entry name" value="SATase_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01172">
        <property type="entry name" value="cysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00101">
        <property type="entry name" value="HEXAPEP_TRANSFERASES"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="7" id="KW-0677">Repeat</keyword>
    <keyword evidence="6 9 11" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="SATase_N" evidence="10">
        <location>
            <begin position="14"/>
            <end position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004876"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00007274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00013266"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00018522"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023315"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="PIRNR" id="PIRNR000441"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="SMART" id="SM00971"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96633.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="268" mass="28767" checksum="F14106C44A1DA699" modified="2018-04-25" version="1">MAQTWPQIASLDPVWTTLRDEAECVARIEPLMASMVHAGVLHHQSLERALSYRIAQKLASPDMSELILREIVDGAFAEDKSLGTAVRADIIAVFERDPACHRYLQPLLFFKGFQALQCYRIGHFLWGAGRAELAYYFQMRTSEAFGVDIHPGARIGQGVMFDHAHSIVIGETAVVGDNVSMLHSVTLGGTGKEDGDRHPKIGSGVMIGAGAHVLGNITVGHCSRIAAGSVVLESVPPCKTVAGVPARIVGEAGCAEPSKMMNQILGDI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGF7</accession>
    <name>A0A2M9PGF7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Glutathione-dependent formaldehyde-activating protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01415</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000049">
        <property type="protein sequence ID" value="PJN96629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011057">
        <property type="entry name" value="Mss4-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51316">
        <property type="entry name" value="SSF51316"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="10039" checksum="6CEBACDBAF6691E2" modified="2018-04-25" version="1" fragment="single">FEEPAPIATRRTSDWAERAWCAGCGSHLFYRLTAGPKAGWAYLSLGLLDDPSAVPFGGEIYIDSKPACYAIAGEHSRLTRAEFEAAVAAEFDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGH3</accession>
    <name>A0A2M9PGH3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000046">
        <property type="protein sequence ID" value="PJN96640.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR021880">
        <property type="entry name" value="DUF3489"/>
    </dbReference>
    <dbReference type="Pfam" id="PF11994">
        <property type="entry name" value="DUF3489"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="127"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96640.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="188" mass="19545" checksum="4ECAF56F8AD1AAC5" modified="2018-04-25" version="1">MTKLSDTQALILSAAAQRPEHIALPLPESLRGGAAAKLVGAMLAKGFLQEVDADLRKGEPVWRETGDGHGVTLVATDAGLAAIGIEPEGANTTPVGPTDAPTEGPAPETPSQQDVAPKARTPREGTKQATLIAMLRAPDGATIEEIMAATGWQSHTVRGAMAGALKKKLGLEVTSEKVEDRGRVYRIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI0</accession>
    <name>A0A2M9PGI0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01345</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000046">
        <property type="protein sequence ID" value="PJN96641.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="46"/>
            <end position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96641.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8040" checksum="3E4E4D33CD63E18D" modified="2018-04-25" version="1">MKQSRLMSLVESVANVIVGYGVAVVTQILIFPVFGLHTTLAQNLKMGAVFTVVSIARSFALRRLFEAIRMRGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM7</accession>
    <name>A0A2M9PGM7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">GlsB/YeaQ/YmgE family stress response membrane protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_01075</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the UPF0410 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000037">
        <property type="protein sequence ID" value="PJN96686.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007341">
        <property type="entry name" value="Transgly_assoc"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33884">
        <property type="entry name" value="PTHR33884"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04226">
        <property type="entry name" value="Transgly_assoc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="12"/>
            <end position="33"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="40"/>
            <end position="63"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="69"/>
            <end position="90"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011006"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96686.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="93" mass="9154" checksum="51A7A590DCEBA36C" modified="2018-04-25" version="1">MEPAVTEGSSILVSIIVWIIVGGVAGWLASLIVRGGGMGLGGNIVLGIVGAIVAGFLFPLLGLGFGGGMLGAILSAMIGAIIVLLIISLIKRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGN2</accession>
    <name>A0A2M9PGN2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Carbohydrate kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00935</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000032">
        <property type="protein sequence ID" value="PJN96708.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016301">
        <property type="term" value="F:kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016310">
        <property type="term" value="P:phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1190.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011611">
        <property type="entry name" value="PfkB_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029056">
        <property type="entry name" value="Ribokinase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00294">
        <property type="entry name" value="PfkB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53613">
        <property type="entry name" value="SSF53613"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="PfkB" evidence="1">
        <location>
            <begin position="4"/>
            <end position="71"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="72"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00294"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96708.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="72" mass="7295" checksum="F35866CF348042C5" modified="2018-04-25" version="1" fragment="single">MFLVCGEALFDFFLEGEAGPASATFAARVGGSPFNVAMGLARLGKSSGLLTGLSDDMLGRRVGQVLAAEGVS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGQ2</accession>
    <name>A0A2M9PGQ2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00960</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000033">
        <property type="protein sequence ID" value="PJN96702.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013589">
        <property type="entry name" value="Bac_transglu_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08379">
        <property type="entry name" value="Bact_transglu_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Bact_transglu_N" evidence="1">
        <location>
            <begin position="3"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="78"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96702.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="78" mass="9007" checksum="BBC849E7B975B387" modified="2018-04-25" version="1" fragment="single">MIYDIGLTITYFYESPAVGGRHLLRLTPADLPGVQRRLACRLEVEPDPAERRDFHDFFGNESIEVVFREAHDEIAFKV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGS5</accession>
    <name>A0A2M9PGS5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Exopolyphosphatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_00715</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000022">
        <property type="protein sequence ID" value="PJN96747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043129">
        <property type="entry name" value="ATPase_NBD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003695">
        <property type="entry name" value="Ppx_GppA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02541">
        <property type="entry name" value="Ppx-GppA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53067">
        <property type="entry name" value="SSF53067"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Ppx-GppA" evidence="1">
        <location>
            <begin position="8"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF02541"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="374" mass="40396" checksum="9F439E0438E10BF6" modified="2018-04-25" version="1" fragment="single">AKGVLLAWPRAEGLVCDMGGASMELAHLDHGAIGDCATSPLGPLKLADLGNSEAVDKAIRKGVKALRKSVPGPAPRLFLVGGSWRAIARIHMERLDYPLKVLHGYAPSAPELLETLAWIREQDQARLAAVSGGSSSQRLSLVPLASQVLAELVRRIEPGRITISAFGLREGLLFRQMPEAMRELDPLIEAARHMESHLARAPGFGDALFDWLGALYEGRRADELRLIHAACLMHDINWRAHPDHRGELAFETVMRSNVAGVNHAERVFIGLALLNRYKGSVGEDEIGRYAAIIPPALAGEAAVLGRAMRLGAMISGAAVGVLEHAALRVEGSRLRLILRGEARDFVGEAVDRRLAALASKLNLEPEIALEEEIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY4</accession>
    <name>A0A2M9PGY4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="ORF">CNY89_00455</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="8">Cell membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the binding-protein-dependent transport system permease family. HisMQ subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000013">
        <property type="protein sequence ID" value="PJN96800.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010065">
        <property type="entry name" value="AA_ABC_transptr_permease_3TM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043429">
        <property type="entry name" value="ArtM/GltK/GlnP/TcyL/YhdX-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30614">
        <property type="entry name" value="PTHR30614"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01726">
        <property type="entry name" value="HEQRo_perm_3TM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-0029">Amino-acid transport</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="40"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="110"/>
            <end position="130"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="184"/>
            <end position="206"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="226"/>
            <end position="252"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="264"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="300"/>
            <end position="320"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="10">
        <location>
            <begin position="229"/>
            <end position="413"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="9">
        <location>
            <begin position="412"/>
            <end position="449"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010072"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022970"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN96800.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="449" mass="49280" checksum="F6108BC66FAF0EDE" modified="2018-04-25" version="1">MDEKIAFHRDALLPPQAPPGSEIGILGWLRANLFSNIPNSILTIVSVLVIFYLVSHIWPFFAHSVWNAESYAQCRQIIAETWGEGAGGACLAVIRERWQQFMFGFYPADLYWRPTLACVLMFVALAPVLFSGLPRQMLWFSIAFPGVAFWLLWGGSLFVPIAIYLGFAAAYLAWWATWRYGSALLAPLAGVAGLLVWWLFVAGPLGRGLGQAIDVLTLTPVTSKQFGGFMLSVTIGVTGIAFSLPLGVLLALGRRSDLVFIKTICVGFIEFIRGVPLIALLLVASFLLNIFLPPGTNFDIILRVIIMVTLFSAAYIAEVIRGGLAALPRGQYEGADAMGLNYWQSMRLVILPQAMKISIPGIVNTFIGLFKDTTLVAIIGLLDPVGLISAIRANASWNGMVWELCRAAQRRAGDGDAHPDHADHDQRPDHDAVERRGRQGRMAREPARD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P470</accession>
    <name>A0A2M9P470_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_30630</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004870">
        <property type="protein sequence ID" value="PJN92332.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92332.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7245" checksum="229DCBF058D5B64E" modified="2018-04-25" version="1" fragment="single">RLGECAVDLDQLRRSYRRDRLGQPAEGLVEPPAHLGSANARWTSTSSAGRIGVIGSASLPKAWSSRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P477</accession>
    <name>A0A2M9P477_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_25400</name>
        <name evidence="1" type="ORF">CNY89_30665</name>
    </gene>
    <organism evidence="1 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004881">
        <property type="protein sequence ID" value="PJN92329.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01003105">
        <property type="protein sequence ID" value="PJN92915.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92329.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92915.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="50" mass="5464" checksum="97E24834D6B6E044" modified="2018-04-25" version="1" fragment="single">GLKLAKTSGFKKARIAVARKMAVILHAMWKTNTPSVGARRRSITIAMPLD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4F8</accession>
    <name>A0A2M9P4F8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS3 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29985</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004637">
        <property type="protein sequence ID" value="PJN92409.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="51"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="73"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13683"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92409.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8093" checksum="410326C5BED5FCE5" modified="2018-04-25" version="1" fragment="single">AFAESFQGKMRDECLNEHLFFSMNHARAVVAGWVEDFNTARPHSAIGYMTPAAYAATLKPQRAPALRHLESSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4H9</accession>
    <name>A0A2M9P4H9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29810</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004564">
        <property type="protein sequence ID" value="PJN92429.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92429.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="8242" checksum="CB333FBD1DFA80B4" modified="2018-04-25" version="1" fragment="single">GPSLDCSDSASVRSCGVMARSTIRIWPSWASCPRWSTSARFRPEPRLLRQRLRQVLRGDGALDDQDMAELGVLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I1</accession>
    <name>A0A2M9P4I1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004494">
        <property type="protein sequence ID" value="PJN92447.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="39"/>
            <end position="58"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92447.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="75" mass="8098" checksum="1DD43D2AB6089F0B" modified="2018-04-25" version="1" fragment="single">GERRKAEEIAADTTPIQPPRIMAEIAKRLGAEDVVVSDASFSAGERRKAEEIAADTTPIQPPRIMAEIAKRLGAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4I2</accession>
    <name>A0A2M9P4I2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">50S ribosomal protein L14</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_29565</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004480">
        <property type="protein sequence ID" value="PJN92454.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.150.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036853">
        <property type="entry name" value="Ribosomal_L14_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000218">
        <property type="entry name" value="Ribosomal_L14P"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00238">
        <property type="entry name" value="Ribosomal_L14"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50193">
        <property type="entry name" value="SSF50193"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="1 3" id="KW-0689">Ribosomal protein</keyword>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022980"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023274"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92454.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="4786" checksum="CC0F09A283FB6BFC" modified="2018-04-25" version="1" fragment="single">MKRDASSKDEATGVQCIKVLGGSHRRYASVGDIIVVSVKEAIPRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4U8</accession>
    <name>A0A2M9P4U8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004165">
        <property type="protein sequence ID" value="PJN92550.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92550.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8461" checksum="29A5A9E5ED1A48FC" modified="2018-04-25" version="1" fragment="single">SPSCDDGVPQAIAEAGAASLATIVIAGNASSWGVADGVNGLCVPPADPRAVASAILRLVHDPVRRGRLGRRLNTEVAARCSTDV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-06-17" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4Z7</accession>
    <name>A0A2M9P4Z7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_28150</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003967">
        <property type="protein sequence ID" value="PJN92617.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.260.40">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010982">
        <property type="entry name" value="Lambda_DNA-bd_dom_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92617.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9453" checksum="CDD0FF341F14CCEA" modified="2018-04-25" version="1" fragment="single">MVLAQARAPFTARIGEILRGERATLGRSLLDVQRELKIRAIYIDAIENADPSVFPNKSFIPGYVRSYARYLGLDPEQVTAQFRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P522</accession>
    <name>A0A2M9P522_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">LysR_substrate domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27805</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003852">
        <property type="protein sequence ID" value="PJN92654.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LysR_substrate" evidence="2">
        <location>
            <begin position="6"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="61"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03466"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92654.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9986" checksum="1BC58A0B05B4AECE" modified="2018-04-25" version="1" fragment="single">IAAVKAGHAGRVTLGVVSTAKYFAPRLVATLKRLSPEVEVALRESNRGGVIADLERQAVDRRGEGRPCRARHPRRGLHGQVFRPPPGRDAET</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P615</accession>
    <name>A0A2M9P615_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">SNF2-rel_dom domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24910</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002966">
        <property type="protein sequence ID" value="PJN92969.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140658">
        <property type="term" value="F:ATP-dependent chromatin remodeler activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004386">
        <property type="term" value="F:helicase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.10810">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038718">
        <property type="entry name" value="SNF2-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000330">
        <property type="entry name" value="SNF2_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00176">
        <property type="entry name" value="SNF2-rel_dom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1" id="KW-0347">Helicase</keyword>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SNF2-rel_dom" evidence="2">
        <location>
            <begin position="3"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="123"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00176"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92969.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="123" mass="13509" checksum="DD679365461DC2CA" modified="2018-04-25" version="1" fragment="single">LSAVVFDEIQALKNPTSLRACAARAMNADFRIGLTGTPIENSVVDLWAVMDQLAPGTLGSLQDFRQTYEDAAPETLAALHEDLFVEMNGRPPLAIRRLKDEVAGDLPAKTRRLHPRLMPTEQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P617</accession>
    <name>A0A2M9P617_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_24880</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002954">
        <property type="protein sequence ID" value="PJN92973.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92973.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10271" checksum="B299D4EA1CD860A9" modified="2018-04-25" version="1" fragment="single">MQVVGRWRIVSADLWECGHLDLCGPARLDSRRARHGEIAFGALQASLDLAYGHNDVAFDWEGDDDMHEVRGSGSAELLDDGSLEIEFEYHRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P667</accession>
    <name>A0A2M9P667_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Beta_helix domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_19620</name>
        <name evidence="4" type="ORF">CNY89_23585</name>
        <name evidence="3" type="ORF">CNY89_24225</name>
    </gene>
    <organism evidence="3 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002762">
        <property type="protein sequence ID" value="PJN93046.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01002577">
        <property type="protein sequence ID" value="PJN93114.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01001660">
        <property type="protein sequence ID" value="PJN93605.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039448">
        <property type="entry name" value="Beta_helix"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012334">
        <property type="entry name" value="Pectin_lyas_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011050">
        <property type="entry name" value="Pectin_lyase_fold/virulence"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13229">
        <property type="entry name" value="Beta_helix"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51126">
        <property type="entry name" value="SSF51126"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Beta_helix" evidence="2">
        <location>
            <begin position="8"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="105"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13229"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93046.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN93114.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN93605.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="127" mass="13803" checksum="56438544ED20355D" modified="2018-04-25" version="1" fragment="single">TDFKIAMNISGGSDFTIRDNDIKQMSQDGLYMGGLKNVTIEDNYFGDYLSADPSDPTNKESIQFYTNGSTAPSEGVTIRGNTFSSEDYRQNILIFNELYRDGDSSAITATSSSRTTTSAAPTPRASP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P678</accession>
    <name>A0A2M9P678_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Sugar transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_24530</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002847">
        <property type="protein sequence ID" value="PJN93018.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008643">
        <property type="term" value="P:carbohydrate transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007387">
        <property type="entry name" value="TRAP_DctQ"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35011">
        <property type="entry name" value="PTHR35011"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04290">
        <property type="entry name" value="DctQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0762">Sugar transport</keyword>
    <keyword evidence="4 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="5 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="32"/>
            <end position="49"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="70"/>
            <end position="93"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="122"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93018.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="14186" checksum="15ABDC2A736AC6EB" modified="2018-04-25" version="1" fragment="single">MSWLILVAVLVSAANAVMRKAFDMSSNAWLELQWYLFGAVFMLAAAWALQKNEHVRIDVLSSRFSQRTRLRIDLVCHLLFLMPFVTLMVWLSWPFFWRSWSTGEQSMNAGGLVMWPAKFLIL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6N1</accession>
    <name>A0A2M9P6N1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Acyl-CoA transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_22615</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002334">
        <property type="protein sequence ID" value="PJN93221.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="71"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93221.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="71" mass="7971" checksum="A349DCDA8B451193" modified="2018-04-25" version="1" fragment="single">MPTFRETILAALHARLSTLPPTALRGEVLPERVPVEGLLILRDGEPGEPEVTLSPLRYHYQHRAEIEACRS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P0</accession>
    <name>A0A2M9P6P0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Peptide ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22725</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002358">
        <property type="protein sequence ID" value="PJN93203.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="2"/>
            <end position="94"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93203.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="16715" checksum="7C579825AD71A115" modified="2018-04-25" version="1" fragment="single">LRPRMQMIFQDPQASLNPRMTVGSIIAEPLDEHAKLDRGARRARVLELMDAVGLNRAFANRYPHEFSGGQRQRIGIARALALNPAFIVCDEPIAALDVSIQAQVVNLLEDLQERLGLTYLFISHDLSMVRHLATRVAVMYLGRIMELAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6P2</accession>
    <name>A0A2M9P6P2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ABC transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_22555</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002317">
        <property type="protein sequence ID" value="PJN93231.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="1">
        <location>
            <begin position="22"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00005"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93231.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10978" checksum="B98CDE4ED4CE807B" modified="2018-04-25" version="1" fragment="single">MIVEAHGLNHWFGADEARKQALHDIDLALPRGSLTVLMGPSGSGKTTVLTLIGCLRAVQDGSVRLMDHELHGAGEAERTALRRRLGFIFQSHNLHESLSAL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6V9</accession>
    <name>A0A2M9P6V9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Mutator family transposase</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_22425</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="1 6">Required for the transposition of the insertion element.</text>
    </comment>
    <comment type="similarity">
        <text evidence="2 6">Belongs to the transposase mutator family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002284">
        <property type="protein sequence ID" value="PJN93245.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001207">
        <property type="entry name" value="Transposase_mutator"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33217">
        <property type="entry name" value="PTHR33217"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00872">
        <property type="entry name" value="Transposase_mut"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0814">Transposable element</keyword>
    <keyword evidence="4 6" id="KW-0815">Transposition</keyword>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="7">
        <location>
            <begin position="7"/>
            <end position="24"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="152"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00002190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00010961"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022464"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022578"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU365089"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN93245.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="152" mass="17066" checksum="F753D8D600B71580" modified="2018-04-25" version="1" fragment="single">SRLRARRGGAAGADDRRNGVSRKTLKSEDGAFEIEVPRDREGSFEPRLIGKGQTRIDGLDEKIIAMYARGMSVRDIRSHLEELYGLEVSPRPDQRVTDAVLDEVKEWRSRALDAVYPVVIFDALRVKIRDKDSRIVKNKAVYLALGITGDGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6Y0</accession>
    <name>A0A2M9P6Y0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">FAD-dependent oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21945</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002160">
        <property type="protein sequence ID" value="PJN93293.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93293.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="161" mass="17687" checksum="79D7D8F7256B596F" modified="2018-04-25" version="1" fragment="single">VIGSNNSAHDICAALWEAGADVTMLQRSSTHIVKSDSLMEIGLGGLYSEQAVANGVTTRKADLIFASLPYKIMHEWQIPLYEQMKERDAAFYQALEDRGFMLDWGADGSGLFMKYLRRGSGYYIDVGACDLVIDGSIKLVSGRQIERLSETGVVLDDGTEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P734</accession>
    <name>A0A2M9P734_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Two-component sensor histidine kinase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_21470</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002053">
        <property type="protein sequence ID" value="PJN93353.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000155">
        <property type="term" value="F:phosphorelay sensor kinase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd00082">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003660">
        <property type="entry name" value="HAMP_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003661">
        <property type="entry name" value="HisK_dim/P"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036097">
        <property type="entry name" value="HisK_dim/P_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00512">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00388">
        <property type="entry name" value="HisKA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47384">
        <property type="entry name" value="SSF47384"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50885">
        <property type="entry name" value="HAMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0418">Kinase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="HAMP" evidence="1">
        <location>
            <begin position="1"/>
            <end position="48"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50885"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93353.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="167" mass="18328" checksum="A9B7309A3BE042A9" modified="2018-04-25" version="1" fragment="single">PLRRFRNRLAARNARDLSPVPADDLPSEIAPMASTLNRLLDRLKAAFDAERSFAANAAHELRTPLAGAIAQVQRLRSETLDPEAARRGAEIEEALKRLTRLSEKMLQLARAEGGRLRTGDAKDLRPVLGLVVSDFARAAGADRFDLVMSDTLVLSDLDPDTFGILCR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7E3</accession>
    <name>A0A2M9P7E3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">HNH_5 domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20875</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001919">
        <property type="protein sequence ID" value="PJN93428.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd00085">
        <property type="entry name" value="HNHc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029471">
        <property type="entry name" value="HNH_5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003615">
        <property type="entry name" value="HNH_nuc"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14279">
        <property type="entry name" value="HNH_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HNH_5" evidence="1">
        <location>
            <begin position="50"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="87"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF14279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93428.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="87" mass="10248" checksum="31B7C3A3290F128C" modified="2018-04-25" version="1" fragment="single">MLNVMYFGHICPVFFAAEIATETEEIRRIGRKNLKFAKMMRIVRRDDYRCQHCNKKLQDNEIEFDHIIPVSKGGSSEEHNIRLTCFG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7I1</accession>
    <name>A0A2M9P7I1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_20240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001789">
        <property type="protein sequence ID" value="PJN93516.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014935620" evidence="1">
        <location>
            <begin position="20"/>
            <end position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93516.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="11513" checksum="4DED1736B6B5A3B3" modified="2018-04-25" version="1">MKRWVLALGITLGAAGSTAAQEAACGQCPPEEVKPPTDDREFRDFLNQEYQAYLLAMQDYLNCLGREHESATKEINEIMARWMLWFGDDAKIHSNSPEPARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7T7</accession>
    <name>A0A2M9P7T7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_19540</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001639">
        <property type="protein sequence ID" value="PJN93616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="129"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="137"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="157" mass="17405" checksum="094386F5187A34C9" modified="2018-04-25" version="1" fragment="single">LFHKADEDNQADPSSIFIRGAAVARRLLAEDTPSYVLHGDLHHENIRHHPERGWLAIDPKGLYGDRAYDAANALCNPGTLPEIVLNPDRLLRQATIMADALDITRERLFVLRLCPCLFVGKLVIGGQSGPEPCARRGENRGGVHQRTVDFPRSHSAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U1</accession>
    <name>A0A2M9P7U1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_19575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001648">
        <property type="protein sequence ID" value="PJN93612.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001646">
        <property type="entry name" value="5peptide_repeat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00805">
        <property type="entry name" value="Pentapeptide"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93612.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="20972" checksum="5CB8FF32F8521A7E" modified="2018-04-25" version="1">MEHATFTGASLVGAQLAGARLEASTLEAATLDKARLTGAQLRYVNFKRARLDDADLSWSVLSGANFKQASLKNAILFGADLNGVQLHEAQLERTDLSESWLQSANLTWTWMKESTLRNAHLEHAILRDARLEGATLANAWLDGAVLENAYLQNSNLTAARLKHANLRHAYLQRSDLTRVRGRVPGGGVARR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8E0</accession>
    <name>A0A2M9P8E0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_18305</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001435">
        <property type="protein sequence ID" value="PJN93806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Sulfatase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="136"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="226" mass="25289" checksum="3AF75E45EB49B8AB" modified="2018-04-25" version="1" fragment="single">EAANANEPFFVWHNTTRMHYRTNLDDHYRGITGTGNVYADGMVELDDDVGALLDLLDELGIADNTLVMFSTDNGPALNSWPDGGMTPFRGEKGVGGYEGGFRVPTLVRWPGKVPAGAVTNEFMTMEDWIPTIMSELGQPDLKDELLTGLNVGGKTYKVHLDGYDQTPVIEGTGPSNRKEFFYFTETTFHGMRYGNWKFLFTEQNKWFNGEVVQLTTPVITRLDLDC</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Q9</accession>
    <name>A0A2M9P8Q9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Site-specific DNA-methyltransferase (adenine-specific)</fullName>
            <ecNumber evidence="2">2.1.1.72</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_17565</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxyadenosine in DNA + S-adenosyl-L-methionine = an N(6)-methyl-2'-deoxyadenosine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:15197"/>
            <dbReference type="Rhea" id="RHEA-COMP:12418"/>
            <dbReference type="Rhea" id="RHEA-COMP:12419"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:90615"/>
            <dbReference type="ChEBI" id="CHEBI:90616"/>
            <dbReference type="EC" id="2.1.1.72"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.72" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01001340">
        <property type="protein sequence ID" value="PJN93920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009007">
        <property type="term" value="F:site-specific DNA-methyltransferase (adenine-specific) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025931">
        <property type="entry name" value="TaqI_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12950">
        <property type="entry name" value="TaqI_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0680">Restriction system</keyword>
    <keyword evidence="5" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="TaqI_C" evidence="8">
        <location>
            <begin position="38"/>
            <end position="149"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001279"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011900"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF12950"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="199" mass="22378" checksum="68B4B184E312F77B" modified="2018-04-25" version="1" fragment="single">MTRDIQGGTVEWRGLGVINPFQDDGRLVDLARFPRLCRYLEARREQIAGRHVAQKAPANWYRTIDRITPAIAGKPKLLIPDIKGAAHIVYEDGQLYPHHNLYYITSDTWDVRALQAVLLSGIARLFVAAYSTRMRGGFLRFQAQYLRRIRLPVWEAVSEGLRAELIDAAARLDLEACNRAVFKLYGLSEAELAALGGGD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8R6</accession>
    <name>A0A2M9P8R6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_17490</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001331">
        <property type="protein sequence ID" value="PJN93932.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93932.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10745" checksum="16DCE7D01D95450D" modified="2018-04-25" version="1">MTTTHIRITGVSVCTTPATWETGDKLLAHIDVEAGGFALGGCLLIQRKRGDHYFQLPKIEGRSADRRAVKIIDQDLRTAITHAAVEALRKFEEATRE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P937</accession>
    <name>A0A2M9P937_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16770</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001236">
        <property type="protein sequence ID" value="PJN94054.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022028">
        <property type="entry name" value="DUF3604"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12228">
        <property type="entry name" value="DUF3604"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94054.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="182" mass="20458" checksum="072FCA2F71338CD5" modified="2018-04-25" version="1" fragment="single">SGPRMKVRFFAGQGFADRYDSYDAMITDGYAKGVPMGGDYTGTESPQFLVWAMKDPIGPNLDRIQIVKGWYEDGELKDEIVDVVASGDRLQADGSVTPIDAPIDMATGDFNAEKGDPELMGVWTDPNWDPAQEAFYYVRVLQLPTGRWTLYDELRAGVKYPDDVKREIVERAWASPIWHEVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B4</accession>
    <name>A0A2M9P9B4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_16365</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001184">
        <property type="protein sequence ID" value="PJN94125.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="349"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94125.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="349" mass="38121" checksum="EC5472F0385025BE" modified="2018-04-25" version="1" fragment="single">AYYLWDGSSLAQVGGGRLTNIGSVAYLGGYVFMTQADGREVEWTSGSGGPGSRNALYFSEAAARGDRIVRAMTVGPYVWVLKERSIETWQLTGVGGTGAFAPIPGAVKERGLRSFNLACPIPDGLFFIGDDNCAYAASAGGMQAVSTPPVDQALKSGEPTHCLYYEDRGHRFAVIRFADRPAWCLDFAMNRWHERAEGVELGPWGAMSSANCYGQWQLGGRLGRVWRLGQAPVDASGPMRRVATSRTLEPGGKFTVALFELFGNFGHQFIEEDAPAYLLDEFDFPLRDSNGHPIYAESPETPRTQKRGPHAWLRFSRDGGNTWGAPKLRSFGALGAYSTRLRVRSLGQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9D8</accession>
    <name>A0A2M9P9D8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Methylenetetrahydrofolate reductase</fullName>
            <ecNumber evidence="8">1.5.1.20</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_16165</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="2 8">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADH</text>
            <dbReference type="Rhea" id="RHEA:19821"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57540"/>
            <dbReference type="ChEBI" id="CHEBI:57945"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>(6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP(+) = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + H(+) + NADPH</text>
            <dbReference type="Rhea" id="RHEA:19817"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:15636"/>
            <dbReference type="ChEBI" id="CHEBI:18608"/>
            <dbReference type="ChEBI" id="CHEBI:57783"/>
            <dbReference type="ChEBI" id="CHEBI:58349"/>
            <dbReference type="EC" id="1.5.1.20"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="3 8">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4 8">One-carbon metabolism; tetrahydrofolate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="8">Belongs to the methylenetetrahydrofolate reductase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.1.20" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01001162">
        <property type="protein sequence ID" value="PJN94158.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00193"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106312">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0106313">
        <property type="term" value="F:methylenetetrahydrofolate reductase NADPH activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="RHEA"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006555">
        <property type="term" value="P:methionine metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0035999">
        <property type="term" value="P:tetrahydrofolate interconversion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd00537">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029041">
        <property type="entry name" value="FAD-linked_oxidoreductase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003171">
        <property type="entry name" value="Mehydrof_redctse-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02219">
        <property type="entry name" value="MTHFR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51730">
        <property type="entry name" value="SSF51730"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 8" id="KW-0274">FAD</keyword>
    <keyword evidence="5 8" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7 8" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000431"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001287"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004777"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU003862"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94158.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="196" mass="21744" checksum="3EB12B7111DCA101" modified="2018-04-25" version="1" fragment="single">YRHVNPEWSFFAAVSRYLDALPDDAYDLIIFDSLAQTGEFEISVAAYPEKHPEASSLSADIDNLKRKIDAGATSAITQFFFDNADFLRFRDACAAAGIAAPIQPGLLPIEKFPKMVNFAARCQARVPDWLHTAFGRALDEEEIGRLSIAVAVDQWRGLIDEGVEHLHVYTLNNPDLSFEDRGGGPRRRGASLPHRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9I7</accession>
    <name>A0A2M9P9I7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Exodeoxyribonuclease 7 small subunit</fullName>
            <ecNumber evidence="3">3.1.11.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="3">Exodeoxyribonuclease VII small subunit</fullName>
            <shortName evidence="3">Exonuclease VII small subunit</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="3" type="primary">xseB</name>
        <name evidence="4" type="ORF">CNY89_15915</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.</text>
            <dbReference type="EC" id="3.1.11.6"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3">Heterooligomer composed of large and small subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="3">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the XseB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.11.6" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01001130">
        <property type="protein sequence ID" value="PJN94200.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009318">
        <property type="term" value="C:exodeoxyribonuclease VII complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008855">
        <property type="term" value="F:exodeoxyribonuclease VII activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006308">
        <property type="term" value="P:DNA catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.287.1040">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00337">
        <property type="entry name" value="Exonuc_7_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003761">
        <property type="entry name" value="Exonuc_VII_S"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037004">
        <property type="entry name" value="Exonuc_VII_ssu_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34137">
        <property type="entry name" value="PTHR34137"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02609">
        <property type="entry name" value="Exonuc_VII_S"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF116842">
        <property type="entry name" value="SSF116842"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01280">
        <property type="entry name" value="xseB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 3" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0540">Nuclease</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00337"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94200.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="83" mass="8855" checksum="14E2C662C47A1450" modified="2018-04-25" version="1">MAEDTGGAPVPDLTFEAALKELEEVVARLESGSASLEDSITLYARGAELRRHCEDKLKSAEERVARIVRGPEGATSTEPLDAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9J5</accession>
    <name>A0A2M9P9J5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Relaxase/mobilization nuclease domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15970</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001138">
        <property type="protein sequence ID" value="PJN94191.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005094">
        <property type="entry name" value="Endonuclease_MobA/VirD2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03432">
        <property type="entry name" value="Relaxase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="136"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94191.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="136" mass="14549" checksum="689D6964696FE256" modified="2018-04-25" version="1" fragment="single">MNPVEIGSGKSFKGLAAYLLHYADRAATAERVDWAESINLNGADPERAWRLMAATAMSADALKAAAGIKKGKKAVNTVFHLALTFNPDDNPSAELQRLAVQGALKAIGLDAYQALAVAHRDTDHAHVHVMVNLIHP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9L2</accession>
    <name>A0A2M9P9L2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_15690</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001104">
        <property type="protein sequence ID" value="PJN94237.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005094">
        <property type="entry name" value="Endonuclease_MobA/VirD2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03432">
        <property type="entry name" value="Relaxase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="332"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94237.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="332" mass="36060" checksum="7512221790CD08BD" modified="2018-04-25" version="1" fragment="single">MSFLSVHHFNSSSGICRTSHFVVSFPQGTDPDAAERAGRAWAAVLFDSGAYGDRWDYYTAFHKDTAYPHIHVVVGRRGLDEGQWLRVSSRGELTFDRLREVQVAVAAREGIALTGTTRLSRGVHDRPVPDAEYRRARTEGREAVAPAHTKASAIATAAEILDYARDYQGAAMSIAGQAPEFAGRLEVAAATILAGQELVAERAAAPRLTPEEATRMVETIEQLQAEVRQNFVELEADVRSVENPAKRAEFLRELAGLKAEAAPFIRDDAGLQGYQAEALHADYRGVAVSAENTRAAAIKADADREVARLAERFGLQPEATLARFAAETVSVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9N7</accession>
    <name>A0A2M9P9N7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">BCCT transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_15595</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001092">
        <property type="protein sequence ID" value="PJN94253.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071705">
        <property type="term" value="P:nitrogen compound transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000060">
        <property type="entry name" value="BCCT_transptr"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30047">
        <property type="entry name" value="PTHR30047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02028">
        <property type="entry name" value="BCCT"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="22"/>
            <end position="50"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="70"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="119"/>
            <end position="143"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="149"/>
            <end position="168"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN94253.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="172" mass="17958" checksum="9FF8CFD82CA9B925" modified="2018-04-25" version="1" fragment="single">SWSPFVGMFIARVSRGRTVREFLVAVLLIPSLVSTIWMTALGGVAISQVFTQGLTSVQDAALELQLFEMLANLPLTAITSLVGIVLVVVFFVTSSDSGSLVIDTISAGGKVNAPTPQRVFWATFEGLVAIALLLGGGLAALQAMAVSTGFPFTVVLLGACFALVKGLMAEPR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R6</accession>
    <name>A0A2M9P9R6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Glutaredoxin</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="primary">grxD</name>
        <name evidence="9" type="ORF">CNY89_15385</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the glutaredoxin family. Monothiol subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001066">
        <property type="protein sequence ID" value="PJN94288.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051537">
        <property type="term" value="F:2 iron, 2 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0097573">
        <property type="term" value="F:glutathione oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd03028">
        <property type="entry name" value="GRX_PICOT_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002109">
        <property type="entry name" value="Glutaredoxin"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033658">
        <property type="entry name" value="GRX_PICOT-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014434">
        <property type="entry name" value="Monothiol_GRX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004480">
        <property type="entry name" value="Monothiol_GRX-rel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10293">
        <property type="entry name" value="PTHR10293"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00462">
        <property type="entry name" value="Glutaredoxin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF005894">
        <property type="entry name" value="Monothiol_GRX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00365">
        <property type="entry name" value="TIGR00365"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 7" id="KW-0001">2Fe-2S</keyword>
    <keyword evidence="4 7" id="KW-0408">Iron</keyword>
    <keyword evidence="5 7" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="3 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Glutaredoxin" evidence="8">
        <location>
            <begin position="21"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="34"/>
        </location>
        <ligand>
            <name>[2Fe-2S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:190135"/>
            <note>ligand shared between dimeric partners</note>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022714"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="PIRNR" id="PIRNR005894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PIRSR" id="PIRSR005894-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00462"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94288.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="124" mass="13280" checksum="B22E6AC150A2AF81" modified="2018-04-25" version="1">MTATANPVHDAIQDTVNSSDVVLFMKGTASMPQCGFSSRVAGVLNFMGVQFRDVNVLADEGLRDGIKTFSNWPTIPQLYVKGEFVGGCDIVTEMTLSGELDQLFSEKGIAFDADAAEKIRAANA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9V3</accession>
    <name>A0A2M9P9V3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15270</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001055">
        <property type="protein sequence ID" value="PJN94310.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="48"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="82"/>
            <end position="101"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="102"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94310.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="102" mass="10369" checksum="4920B4EA926B0703" modified="2018-04-25" version="1" fragment="single">MNLRTPSSLLASALTPALAPLAMPARPAEATVAARPLPLPPGVASKRLLVGFLTITIIVLLGWAMLDGLLRDGFKLGDGIIFGLYIPNVAVNALAAATAIGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9X8</accession>
    <name>A0A2M9P9X8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15055</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001034">
        <property type="protein sequence ID" value="PJN94348.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="1">
        <location>
            <begin position="1"/>
            <end position="16"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="56"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94348.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="56" mass="5759" checksum="AF43C632FFF2653A" modified="2018-04-25" version="1" fragment="single">MAVPPRNPPEPPGSDRADPPQDAAHPQFGIGLPEQLAGSGALDRLVETARGYAAQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA29</accession>
    <name>A0A2M9PA29_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">EamA domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14860</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001015">
        <property type="protein sequence ID" value="PJN94382.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="53"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="79"/>
            <end position="98"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="4"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94382.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="16521" checksum="21047D559EF55A21" modified="2018-04-25" version="1">MEANWIAARGAEGLHPFQILAGASVLGALASGPLALLTGETASLAQPWGPPELAILASGVLNAFAYAGYVWLIAVAGAVFASQIAYLVTAAGMGWSMLLLGERYAPGIWLAAALMLGASPSCGREKAARKTLERCARPMHGPAPAPACSCAPVEECSECPIS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA41</accession>
    <name>A0A2M9PA41_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">Probable membrane transporter protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_14680</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000998">
        <property type="protein sequence ID" value="PJN94410.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002781">
        <property type="entry name" value="TM_pro_TauE-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01925">
        <property type="entry name" value="TauE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="12"/>
            <end position="39"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="83"/>
            <end position="104"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="110"/>
            <end position="131"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="174"/>
            <end position="207"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="213"/>
            <end position="235"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="242"/>
            <end position="260"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363041"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94410.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="303" mass="32069" checksum="1068F85CB027ED5B" modified="2018-04-25" version="1">MQIYLPIAEISVNALLLLGIGGMVGVLSGLFGVGGGFILTPLLFFLGVPPGVAVASASNQIAGSSFSAFLAHLQKKNVDFRMGFVLLAGGVVGSLAGVELFGVLRRSGQFELVVSLLYVLLLGTIGVLMLIESLRALRRRNDPNALLIARKRHTWAHGLPLKMRFRASQLYVSAIPPFVIGLLVGVLAAIMGVGGGFIMVPAMIYLIGMPTRIVIGTSVFQFLFVTGFTAVLQAWKNQSVDVVLSVLLLLGGVIGAQIGANLATRLRAEQLRILLALLVIGVGARLALELALEPAELFSLTMR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA49</accession>
    <name>A0A2M9PA49_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14625</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000992">
        <property type="protein sequence ID" value="PJN94418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="90" mass="9172" checksum="B2B4C67F0F1276AC" modified="2018-04-25" version="1" fragment="single">AGGGEPRGIVHGQEAVIPLPAGGSVPVEVRGGGGQEGGGKMAIELNLGKDLEARILKKAGTQAVQINQAGMAQMRREVPGIVTKHQLRNG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAC1</accession>
    <name>A0A2M9PAC1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">NADH:ubiquinone oxidoreductase subunit NDUFA12</fullName>
            <ecNumber evidence="1">1.6.99.3</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14230</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.6.99.3" evidence="1"/>
    <dbReference type="EMBL" id="PHNO01000948">
        <property type="protein sequence ID" value="PJN94486.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016020">
        <property type="term" value="C:membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032981">
        <property type="term" value="P:mitochondrial respiratory chain complex I assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007763">
        <property type="entry name" value="NDUFA12"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05071">
        <property type="entry name" value="NDUFA12"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0830">Ubiquinone</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="65"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94486.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="65" mass="7449" checksum="3FC760A2F835B40F" modified="2018-04-25" version="1" fragment="single">MGLLAEMFTWWNGQTIATRLFTSRNGKRVGEDAQGNVYYQTADGARRWVIYNGDIEASRVGPEWH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAF5</accession>
    <name>A0A2M9PAF5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS5/IS1182 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14025</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000930">
        <property type="protein sequence ID" value="PJN94518.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94518.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="32" mass="3676" checksum="4BB8C870C7856013" modified="2018-04-25" version="1" fragment="single">VATRYDKRDDNFLASVHLAAIRICLRQNESVT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAN4</accession>
    <name>A0A2M9PAN4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13560</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000883">
        <property type="protein sequence ID" value="PJN94597.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014864131" evidence="1">
        <location>
            <begin position="21"/>
            <end position="112"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94597.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="112" mass="11716" checksum="DD12D649A938697F" modified="2018-04-25" version="1">MFRNIFLGASALALVACAQAEAPAPVTVSNVEVAVDLTAVASRQAAARWATLETDIAAALGQEFVGMTSPEGYLVKVDVDELSLATLGGDDARLTGTAQMVDVFREQVVRSF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP5</accession>
    <name>A0A2M9PAP5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Aminotransferase DegT</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_13495</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the DegT/DnrJ/EryC1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000876">
        <property type="protein sequence ID" value="PJN94610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008483">
        <property type="term" value="F:transaminase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00616">
        <property type="entry name" value="AHBA_syn"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.640.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.1150.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000653">
        <property type="entry name" value="DegT/StrS_aminotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015424">
        <property type="entry name" value="PyrdxlP-dep_Trfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015421">
        <property type="entry name" value="PyrdxlP-dep_Trfase_major"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015422">
        <property type="entry name" value="PyrdxlP-dep_Trfase_small"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30244">
        <property type="entry name" value="PTHR30244"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01041">
        <property type="entry name" value="DegT_DnrJ_EryC1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF000390">
        <property type="entry name" value="PLP_StrS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53383">
        <property type="entry name" value="SSF53383"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0032">Aminotransferase</keyword>
    <keyword evidence="2 3" id="KW-0663">Pyridoxal phosphate</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4" id="KW-0808">Transferase</keyword>
    <feature type="active site" description="Proton acceptor" evidence="1">
        <location>
            <position position="186"/>
        </location>
    </feature>
    <feature type="modified residue" description="N6-(pyridoxal phosphate)lysine" evidence="2">
        <location>
            <position position="186"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR000390-1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRSR" id="PIRSR000390-2"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU004508"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="389" mass="42315" checksum="6D0C8DE74470592D" modified="2018-04-25" version="1">MTIPIAQPLLGPEEESAASEVIRSGWLTQGPQVAAFEQEFAEAVGADHACAVSSCTTALHLALLALGVGEGDEVVTVSHTFIASVNAIRQCGAIPVFVDIEEDGYNIDPAAIAAAITARSRAILCVHQLGMPCDLAAILPIAAAHGLPVIEDAACAIGSEIRMDGAWSRIGRPRGDIVCFSFHPRKVLTTGDGGMLTTRDPDWDARFRLWRQHGMSAPPRLRHDSPTVIFEEYPLPGFNYRLTDIQAAVGRVQLRRLPRIVARRRALAASYAELLRPLDVRPPTEPDWARSNWQSYCIRLDPGVDQRAVMQAMLDRGVATRRGVMCAHLERAHADLPPRTPLPRSEAARDHGLLLPLFPQMMEETQVAVVEALAEALDVRHAPKRAACA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAT6</accession>
    <name>A0A2M9PAT6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">GTPase RsgA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13390</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000864">
        <property type="protein sequence ID" value="PJN94629.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="44"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94629.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="44" mass="4688" checksum="E7A2C3AC7DEFC294" modified="2018-04-25" version="1" fragment="single">MTGAPLADLGWSDFFADQVEPDEAGLAPMRVATVHRARLTAMDG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAW8</accession>
    <name>A0A2M9PAW8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_13110</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000838">
        <property type="protein sequence ID" value="PJN94672.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004803">
        <property type="term" value="F:transposase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006313">
        <property type="term" value="P:transposition, DNA-mediated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.70.1290">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002686">
        <property type="entry name" value="Transposase_17"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036515">
        <property type="entry name" value="Transposase_17_sf"/>
    </dbReference>
    <dbReference type="SMART" id="SM01321">
        <property type="entry name" value="Y1_Tnp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143422">
        <property type="entry name" value="SSF143422"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Y1_Tnp" evidence="1">
        <location>
            <begin position="9"/>
            <end position="132"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM01321"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94672.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="174" mass="20121" checksum="9D39E1CFC7F4AFB0" modified="2018-04-25" version="1">MSNYRRAAVPGATYFFTVHLADRRSQALVENIDALRAAHAATLLDHPVRVDAMVVLPDHLHAVWGLPEGDADFPTRWRKLKSRFSRAVGGTYPRSASKIRKGELGLWQRRYWEHRIRDAQDWRRHVAYCWSDPVRHGLARSARDWPHSSFHRDVRRGLAPADWTGEFREGAFGE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB18</accession>
    <name>A0A2M9PB18_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">DUF2442 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12725</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000803">
        <property type="protein sequence ID" value="PJN94734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018841">
        <property type="entry name" value="DUF2442"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10387">
        <property type="entry name" value="DUF2442"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="10172" checksum="22D199F554D8247A" modified="2018-04-25" version="1">MRTLALETDPLAVDVTFSADVFRVALEDGRELSIPLAWFPRLLRASPEQRQNWELIGRGEGVHWDELDEDISVAGLLAGRGDQTRARTRAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB34</accession>
    <name>A0A2M9PB34_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="11">Biotin carboxylation domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="12" type="ORF">CNY89_12635</name>
    </gene>
    <organism evidence="12 13">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="12 13" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="12 13">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cell membrane</location>
            <topology evidence="9">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the ABC-3 integral membrane protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="12">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000793">
        <property type="protein sequence ID" value="PJN94747.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3470.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR037294">
        <property type="entry name" value="ABC_BtuC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001626">
        <property type="entry name" value="ABC_TroCD"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005481">
        <property type="entry name" value="BC-like_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011764">
        <property type="entry name" value="Biotin_carboxylation_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016185">
        <property type="entry name" value="PreATP-grasp_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30477">
        <property type="entry name" value="PTHR30477"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00950">
        <property type="entry name" value="ABC-3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00289">
        <property type="entry name" value="Biotin_carb_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52440">
        <property type="entry name" value="SSF52440"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF81345">
        <property type="entry name" value="SSF81345"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50979">
        <property type="entry name" value="BC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="3" id="KW-0436">Ligase</keyword>
    <keyword evidence="8 10" id="KW-0472">Membrane</keyword>
    <keyword evidence="5" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="13" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="4 9 10" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="7 10" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="9" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="40"/>
            <end position="60"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="72"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="112"/>
            <end position="129"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="135"/>
            <end position="152"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="159"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="10">
        <location>
            <begin position="185"/>
            <end position="205"/>
        </location>
    </feature>
    <feature type="domain" description="Biotin carboxylation" evidence="11">
        <location>
            <begin position="1"/>
            <end position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008034"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU003943"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50979"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="EMBL" id="PJN94747.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22477" checksum="4D2EF2A29A1052CD" modified="2018-04-25" version="1">MYRKVLIANRGEIAVRVIRTLRRMGVASVAVHSDADASRFGFGLVLYASIPTTLHLSHLLFGDMLGAVWSEVAWSAGAGLFIVAALLAFRADLMAQIFDPGHARAIGLPVRLLHYGLLALVALAVVAALQAVGLILSVALLITPGATAFLWARRFGPMLWISAAIGAGGAILGVYASFWLDSAPAPTIVLAYSLAFALSFLRQVLRDRAARA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB44</accession>
    <name>A0A2M9PB44_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12575</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000788">
        <property type="protein sequence ID" value="PJN94757.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011032">
        <property type="entry name" value="GroES-like_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50129">
        <property type="entry name" value="SSF50129"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94757.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6769" checksum="8CD379D8E93C2DD6" modified="2018-04-25" version="1" fragment="single">HYMGCSTFSNYTVLPEIAVAKVREDAPFDKICSRCRSWRWSSSRNRRRTSAGARGCRPS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB63</accession>
    <name>A0A2M9PB63_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Protein-tyrosine-phosphatase</fullName>
            <ecNumber evidence="2">3.1.3.48</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_12510</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate</text>
            <dbReference type="Rhea" id="RHEA:10684"/>
            <dbReference type="Rhea" id="RHEA-COMP:10136"/>
            <dbReference type="Rhea" id="RHEA-COMP:10137"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:46858"/>
            <dbReference type="ChEBI" id="CHEBI:82620"/>
            <dbReference type="EC" id="3.1.3.48"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.1.3.48" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000782">
        <property type="protein sequence ID" value="PJN94769.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004725">
        <property type="term" value="F:protein tyrosine phosphatase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023485">
        <property type="entry name" value="Ptyr_pPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036196">
        <property type="entry name" value="Ptyr_pPase_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01451">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00226">
        <property type="entry name" value="LMWPc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52788">
        <property type="entry name" value="SSF52788"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-0904">Protein phosphatase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="LMWPc" evidence="5">
        <location>
            <begin position="7"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="4">
        <location>
            <begin position="144"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Pro residues" evidence="4">
        <location>
            <begin position="149"/>
            <end position="165"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00013064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="SMART" id="SM00226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94769.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="165" mass="18451" checksum="BF8704488C0A4153" modified="2018-04-25" version="1">MAPRMPGSVLFCCDHNAVRSPMAEGMMKKFYGRRVFVQSAGVKSDLEVDGFSVAVAAEIGVALARHHARSFTEMEQWGDRIDAYDLIVALSPAAQRAALEYTRYHAIDVEYWPIFDPVGLGETREARLTAYRRARDQILSRMIERFGPPDEPDPPPPPADRSGLE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBC3</accession>
    <name>A0A2M9PBC3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">Transport permease protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_12140</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="6">Cell inner membrane</location>
            <topology evidence="6">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="6">Belongs to the ABC-2 integral membrane protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000744">
        <property type="protein sequence ID" value="PJN94831.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013525">
        <property type="entry name" value="ABC_2_trans"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000412">
        <property type="entry name" value="ABC_2_transport"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022403">
        <property type="entry name" value="Alc_ABC_transptr_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01061">
        <property type="entry name" value="ABC2_membrane"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006648">
        <property type="entry name" value="DrrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR03861">
        <property type="entry name" value="phenyl_ABC_PedC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51012">
        <property type="entry name" value="ABC_TM2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="6" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="27"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="65"/>
            <end position="89"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="110"/>
            <end position="135"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="141"/>
            <end position="165"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="177"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="233"/>
            <end position="253"/>
        </location>
    </feature>
    <feature type="domain" description="ABC2_membrane" evidence="7">
        <location>
            <begin position="11"/>
            <end position="226"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00442"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361157"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF01061"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN94831.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="268" mass="29556" checksum="C65267E4BCF66CE3" modified="2018-04-25" version="1">MRPGWSIAFGGIARRELLRFANQRERFLAALVRPLVWLFIFAAGFRSVLGLSITPPYQTYVLYEVYVTPGLAGMILLFSGMQSSLSMVYDRETGAMRTLLVSPYPRWFLLASKLIAGVLVSVLQVYAFLGIAWLWGVEPPLTGYVTVLPALVLSGIMLGSLGLLISSAIRQLENFAGVMNFVIFPMFFASTALYPLWRMRDSSVLLHDICAANPFSHAVELIRFALYGQFNPTAFAVVLGCTVVFFGATVFMYDPAKGLWRGRGGGPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBF3</accession>
    <name>A0A2M9PBF3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Formate dehydrogenase subunit beta</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="primary">fdxH</name>
        <name evidence="5" type="ORF">CNY89_12025</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000732">
        <property type="protein sequence ID" value="PJN94852.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045333">
        <property type="term" value="P:cellular respiration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015944">
        <property type="term" value="P:formate oxidation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.20.5.480">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017896">
        <property type="entry name" value="4Fe4S_Fe-S-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017900">
        <property type="entry name" value="4Fe4S_Fe_S_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006470">
        <property type="entry name" value="Formate_DH_bsu_Proteobacteria"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038384">
        <property type="entry name" value="Formate_DH_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015246">
        <property type="entry name" value="Formate_DH_TM"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13247">
        <property type="entry name" value="Fer4_11"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09163">
        <property type="entry name" value="Form-deh_trans"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01582">
        <property type="entry name" value="FDH-beta"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00198">
        <property type="entry name" value="4FE4S_FER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51379">
        <property type="entry name" value="4FE4S_FER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="2"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="4Fe-4S ferredoxin-type" evidence="4">
        <location>
            <begin position="35"/>
            <end position="64"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51379"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN94852.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="217" mass="22943" checksum="015F40D58CF90AA7" modified="2018-04-25" version="1" fragment="single">DLEWLIRKDGCMHCADPGCLKACPAPGAIVQYSNGIVDFISENCIGCGYCVSGCPFDIPRISKTAHVAKKCTLCSDRVAVGEGPACAKACPTQCITFGPKEEMIAHAEERIVDLKSRGFENAGLYDPQGVGGTHVMYVLHHADKPEIYAGLPADPRISPVVEAWKGVSKVVGLAVIGAMAVGATLHGIFARPNEVTPEDAARAQKLVDRTPVDKGDA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="17" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBN1</accession>
    <name>A0A2M9PBN1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11395</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000680">
        <property type="protein sequence ID" value="PJN94947.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023155">
        <property type="entry name" value="Cyt_c-552/4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036280">
        <property type="entry name" value="Multihaem_cyt_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010177">
        <property type="entry name" value="Paired_CXXCH_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13435">
        <property type="entry name" value="Cytochrome_C554"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF09699">
        <property type="entry name" value="Paired_CXXCH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF48695">
        <property type="entry name" value="SSF48695"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014961537" evidence="1">
        <location>
            <begin position="31"/>
            <end position="448"/>
        </location>
    </feature>
    <feature type="domain" description="Cytochrome_C554" evidence="3">
        <location>
            <begin position="174"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="domain" description="Paired_CXXCH_1" evidence="2">
        <location>
            <begin position="311"/>
            <end position="339"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="448"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF09699"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF13435"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94947.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="448" mass="48091" checksum="4D38967B37033DE1" modified="2018-04-25" version="1" fragment="single">MSLKRFSAFFHLPTILLAIDLALPADQAWAAEAEAAAPAYLGSAACGSCHAAESMAWIGSHHGLAWTEPSPETVRGDFDEAIYDDGATRARFYRDGERFMIETVGGDGVIHAFPVVGVAGWEPLQQYLLEPIPGRTQAFDIGWDVEGRRWYPVLDTLPPPGDGMHWTGPYKSWEARCAECHATGYARNYDPETRTYAPVHAEVGVGCESCHGPGAAHVAWSRDGAAPGPGLTRHGLTVDLSASAEAEIQQCAGCHARREAFADGDPLPGTPFHDSFGLSLLRPGVYEPDGGVLSENYEYGSFLQSKMYASGVRCSNCHEPHSATLRAEGNAVCAQCHSPAGNAAFPSLRLADYDSPAHTFHPKGSAGAQCAACHMPERTYMGVDARRDHFFRIPRPDLAGMGVPNACADCHADRGSEWAAAQIAERFPDPAHRQPGYAATFAAARRAV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBR8</accession>
    <name>A0A2M9PBR8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Flagellar biosynthesis protein FlhA</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_11235</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000667">
        <property type="protein sequence ID" value="PJN94975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009306">
        <property type="term" value="P:protein secretion"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001712">
        <property type="entry name" value="T3SS_FHIPEP"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30161">
        <property type="entry name" value="PTHR30161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00771">
        <property type="entry name" value="FHIPEP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00949">
        <property type="entry name" value="TYPE3IMAPROT"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0966">Cell projection</keyword>
    <keyword evidence="2" id="KW-0969">Cilium</keyword>
    <keyword evidence="2" id="KW-0282">Flagellum</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="31"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="37"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="111"/>
            <end position="134"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="203"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="236"/>
            <end position="262"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="274"/>
            <end position="298"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="304"/>
            <end position="321"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="329"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="329" mass="34141" checksum="91424088208A5139" modified="2018-04-25" version="1" fragment="single">MPALKFDLATLYQPTVLLAVALMAVIVMMILPMPAFVLDLGLAASFAIAILIFTVTLFIGRPLDFSTFPTILLASLMLRLSLNVSSTKLIIGKGHEGTAAAGHVIEGFAMFIMGGSVAMGLVVFCVLLIVNFIVITKGAGRMAEVGARFALDAMPGKQLAIDADMAAGAITHEEARERRRIEQEETTFFGSLDGASKFVKGDAVAGLLITLINLVVGLAIGVMVHGLPMGEAFRTYSILAVGDGLVTQLPAVIISIAAAMLLSKGGLIGSTDRALIGQLGGYPTALGTVAVLMAFFAFIPGLPLVPFLIGAVALGAAAWVARKGQAEKA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBT7</accession>
    <name>A0A2M9PBT7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Sarcosine oxidase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_11100</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000657">
        <property type="protein sequence ID" value="PJN94995.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.1100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1360.120">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041854">
        <property type="entry name" value="BFD-like_2Fe2S-bd_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028896">
        <property type="entry name" value="GCST/YgfZ/DmdA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013977">
        <property type="entry name" value="GCV_T_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006222">
        <property type="entry name" value="GCV_T_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029043">
        <property type="entry name" value="GcvT/YgfZ_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041117">
        <property type="entry name" value="SoxA_A3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027266">
        <property type="entry name" value="TrmE/GcvT_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43757">
        <property type="entry name" value="PTHR43757"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01571">
        <property type="entry name" value="GCV_T"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08669">
        <property type="entry name" value="GCV_T_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17806">
        <property type="entry name" value="SO_alpha_A3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF101790">
        <property type="entry name" value="SSF101790"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SO_alpha_A3" evidence="3">
        <location>
            <begin position="32"/>
            <end position="114"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T" evidence="1">
        <location>
            <begin position="133"/>
            <end position="396"/>
        </location>
    </feature>
    <feature type="domain" description="GCV_T_C" evidence="2">
        <location>
            <begin position="421"/>
            <end position="507"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF08669"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF17806"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN94995.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="515" mass="56236" checksum="970B3487BD4FE40A" modified="2018-04-25" version="1" fragment="single">SAARPAYAVSDDRAGAGVTLTELPTDRDPGKAKAFVDFQNDVTAKDIRLAVREGMRSIEHVKRYTTNGMATDQGKMSNINGLMIAADALGKPAPQVGLTTFRPPYTPTTFGAFAGYHQGETFEVTRKTPIDPWAEANGAVFEPVALWRRAWYFPKPGEDMHTAVGRECRAARASVGIFDASTLGKIEVVGPDAVTFMERMYTNPWAKLGVGRCRYGLLLGEDGFIRDDGVIGRLAQDRFHVTTTSGGAPRVLNMMEDYLQTEWPDLKVWLTSTTEQWAVVALQGPNARKLLEPFVEGLDLSEAAFPHMAVAECTVAGFPARLFRVSFTGELGFEINVPARHGRALWEKLMEAGKQYDICPYGTETMHVLRAEKGYIIVGQDTDGTLTPDDAGLTWAIGKLKPDFVGKRSLTRPDMTAKGRKQLVGLLTDDPKVVLQEGAQIVADPNEPKPMTMLGHVTSSYWSDALGRSIAMAVVVDGRARDGQTLHVPMPDGVLTARVVKSTVFYDPEGKRLSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC39</accession>
    <name>A0A2M9PC39_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Septum site-determining protein MinC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="primary">minC</name>
        <name evidence="7" type="ORF">CNY89_10700</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="5">Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MinC family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000623">
        <property type="protein sequence ID" value="PJN95064.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000902">
        <property type="term" value="P:cell morphogenesis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000917">
        <property type="term" value="P:division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:1901891">
        <property type="term" value="P:regulation of cell septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.160.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016098">
        <property type="entry name" value="CAP/MinC_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013033">
        <property type="entry name" value="MinC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036145">
        <property type="entry name" value="MinC_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005526">
        <property type="entry name" value="Septum_form_inhib_MinC_C"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR34108">
        <property type="entry name" value="PTHR34108"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03775">
        <property type="entry name" value="MinC_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF63848">
        <property type="entry name" value="SSF63848"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01222">
        <property type="entry name" value="minC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="2" id="KW-0132">Cell division</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0717">Septation</keyword>
    <feature type="domain" description="MinC_C" evidence="6">
        <location>
            <begin position="11"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006291"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023210"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00025606"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF03775"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95064.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12354" checksum="8393390867833F4E" modified="2018-04-25" version="1" fragment="single">PKPDPGPATLVVTEPVRSGQRIFAERGDLIVLASVSSGAELMAQGNIHVYGPLRGRALAGVNGDKTARIFCQSLEAELIAIAGLYRTSEDLSPALRQQRVQAFLRDETLCVEPLK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCC6</accession>
    <name>A0A2M9PCC6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_10045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000571">
        <property type="protein sequence ID" value="PJN95173.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023200">
        <property type="entry name" value="RMF_sf"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="26"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95173.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="59" mass="6449" checksum="9F36D3E6FA78B6F7" modified="2018-04-25" version="1" fragment="single">LPQGAGDDPRPRAYDDGFTARQAGKALEDNPFRADTSDHLAWEAGWSEAREQIVPAPRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE6</accession>
    <name>A0A2M9PCE6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Phenylalanine--tRNA ligase subunit alpha</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_09945</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000563">
        <property type="protein sequence ID" value="PJN95193.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004826">
        <property type="term" value="F:phenylalanine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006432">
        <property type="term" value="P:phenylalanyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004188">
        <property type="entry name" value="Phe-tRNA_ligase_II_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010978">
        <property type="entry name" value="tRNA-bd_arm"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02912">
        <property type="entry name" value="Phe_tRNA-synt_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46589">
        <property type="entry name" value="SSF46589"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2 6" id="KW-0436">Ligase</keyword>
    <keyword evidence="3" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Phe_tRNA-synt_N" evidence="5">
        <location>
            <begin position="20"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF02912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95193.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6424" checksum="B0A219B85EEBAC6B" modified="2018-04-25" version="1" fragment="single">MDDITGLRAKYLASINEAASEPALEEVRLQALGKKGELSLALRSLGAMTPEERSVAGPALN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG4</accession>
    <name>A0A2M9PCG4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-isopropylmalate dehydratase</fullName>
            <ecNumber evidence="5">4.2.1.33</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="15" type="primary">leuC</name>
        <name evidence="15" type="ORF">CNY89_09815</name>
    </gene>
    <organism evidence="15 16">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="15 16" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="15 16">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>(2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate</text>
            <dbReference type="Rhea" id="RHEA:32287"/>
            <dbReference type="ChEBI" id="CHEBI:1178"/>
            <dbReference type="ChEBI" id="CHEBI:35121"/>
            <dbReference type="EC" id="4.2.1.33"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis; L-leucine biosynthesis; L-leucine from 3-methyl-2-oxobutanoate: step 2/4.</text>
    </comment>
    <comment type="caution">
        <text evidence="15">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.33" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01000552">
        <property type="protein sequence ID" value="PJN95213.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00048">
        <property type="reaction ID" value="UER00071"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003861">
        <property type="term" value="F:3-isopropylmalate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009098">
        <property type="term" value="P:leucine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="CDD" id="cd01583">
        <property type="entry name" value="IPMI"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.499.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004430">
        <property type="entry name" value="3-IsopropMal_deHydase_lsu"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015931">
        <property type="entry name" value="Acnase/IPM_dHydase_lsu_aba_1/3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001030">
        <property type="entry name" value="Acoase/IPM_deHydtase_lsu_aba"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018136">
        <property type="entry name" value="Aconitase_4Fe-4S_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036008">
        <property type="entry name" value="Aconitase_4Fe-4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033941">
        <property type="entry name" value="IPMI_cat"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00330">
        <property type="entry name" value="Aconitase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00415">
        <property type="entry name" value="ACONITASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53732">
        <property type="entry name" value="SSF53732"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00170">
        <property type="entry name" value="leuC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00450">
        <property type="entry name" value="ACONITASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01244">
        <property type="entry name" value="ACONITASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="7" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="8" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="13" id="KW-0100">Branched-chain amino acid biosynthesis</keyword>
    <keyword evidence="10" id="KW-0408">Iron</keyword>
    <keyword evidence="11" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="6" id="KW-0432">Leucine biosynthesis</keyword>
    <keyword evidence="12" id="KW-0456">Lyase</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="16" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aconitase" evidence="14">
        <location>
            <begin position="13"/>
            <end position="428"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000491"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00002695"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00004729"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00011998"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022430"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="ARBA" id="ARBA00023304"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="14">
        <source>
            <dbReference type="Pfam" id="PF00330"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="15">
        <source>
            <dbReference type="EMBL" id="PJN95213.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="438" mass="47180" checksum="7163E17383C7ACFC" modified="2018-04-25" version="1">MSAQDSAPKTLYDKIWDAHLVDQAPDGTCLIYIDRQLVHEVTSAQAFEGLRLAGRKVRAPEKVVAVPDHNVPTSLDREKGIEDEMSRIQVETLKKNAEDFGIEYYGVEDVRQGIVHIIGPEQGWTQPGMTIVCGDSHTATHGAFGALAHGIGTSEVEHVLATQTLIQRKAKNMKVEVRGALGPWVTAKDVTLSIIGATGTAGGTGHVIEYTGEAIRGLSMEGRMTVCNMAIEGGARAGLIAPDDVTFDYVRGRPKAPKGAAWEMAVSGWRRLFTDEGAHFDKVVVLEAADIAPVVTWGTSPEDVLPITGVVPRPEDFEGGKVEAARRSLDYMGLTPGTRLQDVAIDTVFIGSCTNGRIEDLREVAKVMEGRRVKDGIRAMIVPGSGLVRAQAEEEGIAQKLIEAGFDWRMAGCSMCLGMNPDQLAPGELWDEQAEALG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN9</accession>
    <name>A0A2M9PCN9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09275</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000508">
        <property type="protein sequence ID" value="PJN95309.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="26"/>
            <end position="55"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="111"/>
            <end position="141"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Polar residues" evidence="1">
        <location>
            <begin position="30"/>
            <end position="53"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95309.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="141" mass="14819" checksum="E2AD5501752EEBA6" modified="2018-04-25" version="1">MRPRFGVMRGREFLMKDGYNFDLTKEDIASSGPRMQSRSSAGSSSSPSTKARSLGPPMCSLVIVMGFSSCSRPSRRARKGFGAQHLSWSGEAASLRAGGLGLICDGSAEGRVRRSSGAHRSPSSPPPGPLGPLRLPLEGLG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD42</accession>
    <name>A0A2M9PD42_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Helicase C-terminal domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08460</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000449">
        <property type="protein sequence ID" value="PJN95443.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001650">
        <property type="entry name" value="Helicase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00271">
        <property type="entry name" value="Helicase_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00490">
        <property type="entry name" value="HELICc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51194">
        <property type="entry name" value="HELICASE_CTER"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Helicase C-terminal" evidence="1">
        <location>
            <begin position="156"/>
            <end position="309"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="536"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS51194"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95443.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="536" mass="59472" checksum="C76D5743C5092BD2" modified="2018-04-25" version="1" fragment="single">MPFDDAPRVTAMLGPTNTGKTHYAIERMLAHRTGVIGLPLRLLAREVYDRVVALRGPSVVALITGEERIVPARAAFWICTVEAMPLDILPEFLAVDEIQLCADPDRGYIFTNRLLHARGLSETLFLGSDTMRGRIAALVPRVSFLRRERFSRLSYTGPRKLSRMPPRSAVVGFSADDVYAIAELIRRQKGGAAVVMGALSPRTRNAQVELYQNGDVDYLVATDAIGMGLNLDIAHVAFSGTVKFDGRRHRHLAPNELAQIAGRAGRFTSDGTFGVTGEAEPLDPEVVEAIESHQFAPLRRLHWRNARLDFGSPEALVASLEAPSPHPDLLKTREADDLATLRALMEIPEVASRIRDARDVRLLWDVCQIPDFRKVSPAEHATLCARLHGFLHKGGGVPTDWLAGQIKRIDLVEGDIDALSKRLAYIRTWTYVAQRKAWIDDADHWRDETRAVEDRLSDALHARLTQRFVDRRTSVLMRRLKQKESLVAKVSDTGEVSIDDQFIGRLDGFRFRLDPSADAEAAKTLRAAGVAALAPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD66</accession>
    <name>A0A2M9PD66_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Excalibur domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_08215</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000431">
        <property type="protein sequence ID" value="PJN95487.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008613">
        <property type="entry name" value="Excalibur_Ca-bd_domain"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05901">
        <property type="entry name" value="Excalibur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00894">
        <property type="entry name" value="Excalibur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Excalibur" evidence="1">
        <location>
            <begin position="11"/>
            <end position="49"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00894"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95487.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="52" mass="5615" checksum="B69DDC0A7451C871" modified="2018-04-25" version="1">MLAAPVVASARDYDCGDFSTQAEAQRVYEDAGPGNPYRLDRDHDGVACETLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD71</accession>
    <name>A0A2M9PD71_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_08190</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000429">
        <property type="protein sequence ID" value="PJN95491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008878">
        <property type="entry name" value="Transposase_IS66_Orf2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36455">
        <property type="entry name" value="PTHR36455"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF05717">
        <property type="entry name" value="TnpB_IS66"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13454" checksum="CAA3EB0EEF36291C" modified="2018-04-25" version="1">MIVPAQAVRVVIATRPIDFRRGHDSLAAYVQNELKLDPHSGALIVFRSRRGDRIKVLVWDGSGLVLVYKRLEEGKFAWPAIRDGVMRLSRAQYEALFDGLDWRRVYGPRRVRPPAAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDD6</accession>
    <name>A0A2M9PDD6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Oxidoreductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07910</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000411">
        <property type="protein sequence ID" value="PJN95533.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036291">
        <property type="entry name" value="NAD(P)-bd_dom_sf"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51735">
        <property type="entry name" value="SSF51735"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95533.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="4768" checksum="A536363DAC6F93B5" modified="2018-04-25" version="1" fragment="single">MSSMVKVGLVGLGKMGISHFSIVSSHPDTQVHVCDSSGIVLDVVGR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI7</accession>
    <name>A0A2M9PDI7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">GntR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000377">
        <property type="protein sequence ID" value="PJN95610.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000524">
        <property type="entry name" value="Tscrpt_reg_HTH_GntR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00392">
        <property type="entry name" value="GntR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH gntR-type" evidence="1">
        <location>
            <begin position="13"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="45"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00392"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95610.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="45" mass="4776" checksum="5C758BDA8E7CD1C0" modified="2018-04-25" version="1" fragment="single">MTLRDRGGAGSLVAQVGEAIRRQILAGDYPTGARLPSEAQLTELH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDN1</accession>
    <name>A0A2M9PDN1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07390</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000373">
        <property type="protein sequence ID" value="PJN95624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013096">
        <property type="entry name" value="Cupin_2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07883">
        <property type="entry name" value="Cupin_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Cupin_2" evidence="1">
        <location>
            <begin position="46"/>
            <end position="117"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF07883"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="160" mass="17535" checksum="7D328BFF6471FD04" modified="2018-04-25" version="1">MGVVDQSKCPVRTGSIYPEPYAAMVAGRSSLRLGQAGGLTQFGANLVILAPGARSSMRHWHEQEDEFVMVTEGEVVLVQDEGETVMGPGDCAAFPAGDTNGHCFFNRTDREARFLVVGTKAPREVAHYSDEDFLIVIEGTEARMTYRDGTPWTGHRKLED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDT0</accession>
    <name>A0A2M9PDT0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Type I secretion system permease/ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_07005</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000345">
        <property type="protein sequence ID" value="PJN95689.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030256">
        <property type="term" value="C:type I protein secretion system complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030253">
        <property type="term" value="P:protein secretion by the type I secretion system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010128">
        <property type="entry name" value="ATPase_T1SS_PrtD-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR24222:SF0">
        <property type="entry name" value="PTHR24222:SF0"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00005">
        <property type="entry name" value="ABC_tran"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2 3" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 3" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="ABC transporter" evidence="4">
        <location>
            <begin position="21"/>
            <end position="257"/>
        </location>
    </feature>
    <feature type="binding site" evidence="3">
        <location>
            <begin position="55"/>
            <end position="62"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95689.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="265" mass="27897" checksum="04E80C2E0BE39BE7" modified="2018-04-25" version="1" fragment="single">LLASTPDADTPTALPRPRAFLDVNQITVFPPDQQKASLRMLEFSLKPGQALGVIGQSASGKSTLARVLTGIWRPASGAVRLDGAALDQYDQDTLGRYIGYLPQDVALFNGTVADNIARLDTKPDPEAVVAAAKRAGAHDMILQLPQGYDTPVSAGGSRLSGGQKQRIGLARAFYGDPVLMVLDEPNSNLDAAGQDALNLAIRQAKEDGKIVIIMAHRPAGIAECDLILIIDGGVAKAFGPRDEVLKAHVRNYAAVAGRIAGEAQS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU0</accession>
    <name>A0A2M9PDU0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Succinate-semialdehyde dehydrogenase (NADP(+))</fullName>
            <ecNumber evidence="6">1.2.1.16</ecNumber>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">gabD</name>
        <name evidence="6" type="ORF">CNY89_07010</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="4">Belongs to the aldehyde dehydrogenase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.2.1.16" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000346">
        <property type="protein sequence ID" value="PJN95684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009013">
        <property type="term" value="F:succinate-semialdehyde dehydrogenase [NAD(P)+] activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.309.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.605.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016161">
        <property type="entry name" value="Ald_DH/histidinol_DH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016163">
        <property type="entry name" value="Ald_DH_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016160">
        <property type="entry name" value="Ald_DH_CS_CYS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029510">
        <property type="entry name" value="Ald_DH_CS_GLU"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR016162">
        <property type="entry name" value="Ald_DH_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015590">
        <property type="entry name" value="Aldehyde_DH_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00171">
        <property type="entry name" value="Aldedh"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53720">
        <property type="entry name" value="SSF53720"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00070">
        <property type="entry name" value="ALDEHYDE_DEHYDR_CYS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00687">
        <property type="entry name" value="ALDEHYDE_DEHYDR_GLU"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 4 6" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Aldedh" evidence="5">
        <location>
            <begin position="34"/>
            <end position="427"/>
        </location>
    </feature>
    <feature type="active site" evidence="2">
        <location>
            <position position="207"/>
        </location>
    </feature>
    <feature type="active site" evidence="3">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU10008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="RuleBase" id="RU003345"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF00171"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN95684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="433" mass="44987" checksum="F8A2DEADAAE99C6A" modified="2018-04-25" version="1" fragment="single">SISRPMMKRNITTPSSAACSIAAGSEKSPSPKGLMEAHAEDLARVLTAEQGKPLAEARGEIAYGASFVKWFAEEARRIDGTVIPSPTPDRRILTLKEPVGVCGIVTPWNFPNAMITRKVAPALAAGCTVVVKPSDLTPFSALALGVLAERAGIPAGVINIVTGLPAAIGAELTGNPVVRKISFTGSTRVGALLMAQSAPSVKRLSLELGGNAPFIVFDDADLDAAVEGAIASKFRNGGQTCVCSNRILVQAGVHDAFAEKLAARVRALRVGPGTEPGVDIGPMINAAAVEKIARHVADARAKGRAVLAEAPTPAGQYAAPMVLTGATAEMDLATEETFGPVAPLFRFETEEEAVALANATPFGLAAYFYTENLRRAWRVGEALEFGMVGLNTGAVSTTVSPFGGVKQSGLGREGARSGIEEYLEVKAFHMGGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDU1</accession>
    <name>A0A2M9PDU1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_06815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000332">
        <property type="protein sequence ID" value="PJN95721.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029465">
        <property type="entry name" value="ATPgrasp_TupA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF14305">
        <property type="entry name" value="ATPgrasp_TupA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="316"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95721.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="316" mass="36689" checksum="D3814607C2E07261" modified="2018-04-25" version="1" fragment="single">MDIIKAFQGQARVLKKKFDKHITPDGYYVSKQYHHRHGFYPDLKNPKDLSEKLQWLKLHDRSALHTQCADKIRARDYVASRLGTETLIPAIRISYDAADVDPGVIAADRFVLKTNHDQGGVFICRDRNAFDWAGVRENVARRMKLNKYYEFREHQYKHVRPGILVEDLIDGDNEGNVREIKFYCFHGKPGFIQVVLDRFENRREIFYDPDWKRMHFYGPAPQLEGELAPPAGLDKLMRDAATLAEPFLFCRIDFLLGANDRPWFGEITFHHGAGLIRFQPDPFERAFGDMIDLGRLPETRRRQEQLAGVQARTTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDX5</accession>
    <name>A0A2M9PDX5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Fe3+/spermidine/putrescine ABC transporter ATP-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_06670</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000321">
        <property type="protein sequence ID" value="PJN95751.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043190">
        <property type="term" value="C:ATP-binding cassette (ABC) transporter complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008995">
        <property type="entry name" value="Mo/tungstate-bd_C_term_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013611">
        <property type="entry name" value="Transp-assoc_OB_typ2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08402">
        <property type="entry name" value="TOBE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50331">
        <property type="entry name" value="SSF50331"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="2" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TOBE_2" evidence="1">
        <location>
            <begin position="121"/>
            <end position="203"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF08402"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95751.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22664" checksum="2FEA58DC0B3735C3" modified="2018-04-25" version="1" fragment="single">PRPRILLMDEPFSGLDNRLRDAVRDDTLDILKEEGAAVLLVTHEPDEAMRMADGIALMRRGRIVQQGAPYHIYNNPADRDAAGFFSDVNVIAASVTDCQAETPFGRFLAPGVADGTRIEIVIRPQHLKIDFDRKGQGPLPTPQDGVPARGQVIRARFMGDQSIVELAMDHDRSVLKATVPGVFLPRAGTPLWLSIRRDRCFVFPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE76</accession>
    <name>A0A2M9PE76_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_06215</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000292">
        <property type="protein sequence ID" value="PJN95823.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="59"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95823.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="304" mass="33624" checksum="F81137D77171F528" modified="2018-04-25" version="1">MSYVNSLKTFVRVYELGSMSAAARDQRVSAAVASARIAELEKHLGVRLFNRTTRSLQPTEQGTIFYKGALKILETIEEAELAVADVSRSPRGSIHVAAPLGIGKRLIAPLIPGFKDLYPAIDVRLRLSDRRVDITAEGLDVAFLLGPLEDSNLRVRPIADCRRVLAASPQYVARRGMPKSGRDLVEEKHACLMLRYPGAREFVWTLVTPEGPRRFEVTGPFESDDGDVLTGWALTGRGIILKPVFEIAELLRAGELLVVAEETPPQEVRLAALFPHKRLQDPKIRLFIEHMVAACRKAVARLTG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE90</accession>
    <name>A0A2M9PE90_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">Integrase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_05990</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000279">
        <property type="protein sequence ID" value="PJN95867.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.130">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.443.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011010">
        <property type="entry name" value="DNA_brk_join_enz"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013762">
        <property type="entry name" value="Integrase-like_cat_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002104">
        <property type="entry name" value="Integrase_catalytic"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010998">
        <property type="entry name" value="Integrase_recombinase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00589">
        <property type="entry name" value="Phage_integrase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56349">
        <property type="entry name" value="SSF56349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51898">
        <property type="entry name" value="TYR_RECOMBINASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="1" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Tyr recombinase" evidence="4">
        <location>
            <begin position="220"/>
            <end position="397"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="3">
        <location>
            <begin position="1"/>
            <end position="75"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023172"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS51898"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95867.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="403" mass="43907" checksum="1018F2027FCFADCB" modified="2018-04-25" version="1">MRRTRTNDQAPAPGRSRPPRALCPQQQGRQLPSRPPRGGRQGGADADRGWRASAGARRRGGAGVKKPSLPYLETRTRRTKAGPVVYWYFRRGKGAMTRLPDPDDEGFLAAYAEARRGAPKPTRTSIRALIQSYKASPRWSKLSPRSKADYAAVLDHIEGVAGEHDVSKITRPGVIKARDKVGGRKGNYIAQLYSVLCEHAIDLGWIKMNPAKGVKMTALGDGYGPWPDWAIAAYRAMATGRALLIFELCYWTGQRIGDVLKMRWDAIASEGGVEAIVLRQGKAGRAGKRADELWIPILPGLRDVLDATPKTGLTIIAQSNSRPLSDRQASHAVEKIRKAIGATEFKLHGLRANAASELYEAGCTDAQVQAVTGHKSVTMARKYGRGARQKTLAKAAMEKRGGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PED5</accession>
    <name>A0A2M9PED5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Aminodeoxychorismate/anthranilate synthase component II</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05905</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000275">
        <property type="protein sequence ID" value="PJN95878.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071704">
        <property type="term" value="P:organic substance metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd01743">
        <property type="entry name" value="GATase1_Anthranilate_Synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.880">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029062">
        <property type="entry name" value="Class_I_gatase-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017926">
        <property type="entry name" value="GATASE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006221">
        <property type="entry name" value="TrpG/PapA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00117">
        <property type="entry name" value="GATase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52317">
        <property type="entry name" value="SSF52317"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00566">
        <property type="entry name" value="trpG_papA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GATase" evidence="1">
        <location>
            <begin position="3"/>
            <end position="188"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00117"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95878.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="193" mass="20880" checksum="6F057E1FB80EB4F1" modified="2018-04-25" version="1">MLLLIDNYDSFTYNLFHYLGTLGAEILVRRNDEIDVQTAMGLNPEAIILSPGPCDPDKAGVCLALIGAAAETRTPLMGVCLGHQAIGQQFGGRVIRAPAIMHGKLDDIVHSGKGVFRGLPSPFRATRYHSLTVERETLPDCLEITAEVADGTIMGLRHRSLPIEGVQFHPESIASEHGLALLDNFLTEARVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEK9</accession>
    <name>A0A2M9PEK9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA methylase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_05300</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000240">
        <property type="protein sequence ID" value="PJN95975.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR015840">
        <property type="entry name" value="DNA_MeTrfase_ParB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003115">
        <property type="entry name" value="ParB/Sulfiredoxin_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036086">
        <property type="entry name" value="ParB/Sulfiredoxin_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02195">
        <property type="entry name" value="ParBc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF036758">
        <property type="entry name" value="Aden_M_ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SMART" id="SM00470">
        <property type="entry name" value="ParB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF110849">
        <property type="entry name" value="SSF110849"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="ParB" evidence="2">
        <location>
            <begin position="11"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="144"/>
            <end position="166"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="426"/>
            <end position="458"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="426"/>
            <end position="450"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="SMART" id="SM00470"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95975.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="458" mass="50176" checksum="A794C6955CE2867F" modified="2018-04-25" version="1">MTLSFAPERIEMWPLAKLQPYAKNAKAHGADQVAKIAASMAEFGWTVPCLVGEDGELIAGHGRVLAATQLGLTEAPVIVLGHLTEAQRRAYRIADNKLTELGTWDEALLSAELNELLAEDFDLSLVGFSDGELDKLLAYVAEDDGEEGGAGGSVPPVTIPEPPRNPASRTGDLWILGEHRLLCGDSTSAADVRRLMNGERAILFATDPPYLVDYDGSNHPTRNKDWSASYGTTWDDSSQGAELYDGFIAAAVAEAITEDAAWYCWHASRRQAMLEACWEKAGAFVHQQIIWVKDRGVLTRSHYLWKHEPCFMGWRRPNRPPKVAEETLPSTWALPSFAKDDRPDHPTPKPLDAFGIPMRQHVARGGLCYEPFSGSGSQIMAGEANGRRVFAMEISPAYLDVAVERWQAESGRDAILDGDGRTFAQVRTERLGDDAEARADTPDPDAAPEPARKRQTAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEP6</accession>
    <name>A0A2M9PEP6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="8">Transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="8" type="ORF">CNY89_04985</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the purine-cytosine permease (2.A.39) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000220">
        <property type="protein sequence ID" value="PJN96027.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001248">
        <property type="entry name" value="Pur-cyt_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045225">
        <property type="entry name" value="Uracil/uridine/allantoin_perm"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30618">
        <property type="entry name" value="PTHR30618"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02133">
        <property type="entry name" value="Transp_cyt_pur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="36"/>
            <end position="59"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="65"/>
            <end position="85"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="117"/>
            <end position="139"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="145"/>
            <end position="162"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="169"/>
            <end position="190"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="210"/>
            <end position="228"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="249"/>
            <end position="270"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="290"/>
            <end position="312"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="324"/>
            <end position="341"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="361"/>
            <end position="379"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="399"/>
            <end position="424"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="6">
        <location>
            <begin position="1"/>
            <end position="20"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96027.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="448" mass="48951" checksum="13378326CF0CBC86" modified="2018-04-25" version="1">MTTTPLEAQATHGHKAAGAESLEPQDTRIMGRWSYLFAWMGGCVSIGTFTMGSSIVGILNLTQATIAIAIGCFVIGVALAINGAAGYKYGIPFMVQARSAFGFTGTRFPGLVRAIPAIVWYGFQSWIGAGALNAISVLLFGVDNLVFWFIAFQFLQIGLSVLGFQGIKWLENIGAVFILFSLAYMFISVIRRFGDEITTNLVNIDGTWGMPFWGATMLFLGIYSTMILNVSDYSREHEHGSSPSLLTTIYAMSILPVTMFMGLIGLMVSGATGITDTIQVFSSAVDNTPLLVVTLIFIIFAQVTTNVLNNVIPPTYVLMDVFKMPFKLATIIVGLLAFATFPWKLVREESAAGLQVFVQTYSAFLGPIFAVMVVDYYILRKRTLDIEKLYDENGPYRGVNWAAVIASLVGAAVALTFSSISWYASLIPAGVTYWLLMQHWGPAQRFRA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEQ2</accession>
    <name>A0A2M9PEQ2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 5">30S ribosomal protein S1</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04920</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="4 5">Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the bacterial ribosomal protein bS1 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000216">
        <property type="protein sequence ID" value="PJN96037.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005840">
        <property type="term" value="C:ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003723">
        <property type="term" value="F:RNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003735">
        <property type="term" value="F:structural constituent of ribosome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006412">
        <property type="term" value="P:translation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.40.50.140">
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012340">
        <property type="entry name" value="NA-bd_OB-fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035104">
        <property type="entry name" value="Ribosomal_protein_S1-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000110">
        <property type="entry name" value="Ribosomal_S1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022967">
        <property type="entry name" value="S1_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003029">
        <property type="entry name" value="S1_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10724:SF7">
        <property type="entry name" value="PTHR10724:SF7"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00575">
        <property type="entry name" value="S1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF002111">
        <property type="entry name" value="RpsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00681">
        <property type="entry name" value="RIBOSOMALS1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00316">
        <property type="entry name" value="S1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50249">
        <property type="entry name" value="SSF50249"/>
        <property type="match status" value="6"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00717">
        <property type="entry name" value="rpsA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50126">
        <property type="entry name" value="S1"/>
        <property type="match status" value="6"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0677">Repeat</keyword>
    <keyword evidence="5" id="KW-0687">Ribonucleoprotein</keyword>
    <keyword evidence="5 7" id="KW-0689">Ribosomal protein</keyword>
    <keyword evidence="5" id="KW-0694">RNA-binding</keyword>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="20"/>
            <end position="86"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="104"/>
            <end position="170"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="191"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="276"/>
            <end position="346"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="363"/>
            <end position="433"/>
        </location>
    </feature>
    <feature type="domain" description="S1 motif" evidence="6">
        <location>
            <begin position="450"/>
            <end position="518"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006767"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00016782"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00025604"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="PIRNR" id="PIRNR002111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50126"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96037.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="555" mass="61070" checksum="ECBB0EC287581286" modified="2018-04-25" version="1">MQDFEALLNESYELETPDEGSVVKGVVLAIEAGQAIIDIGYKMEGRVDLKEFAAPGKAPEIEVGDTVEVYLDRVENARGEAVLSREKARREEAWDRLEKAYEKEERVEGAIFGRVKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMHMPQPFQILKMDRRRGNIVVSRRAVLEESRAEQRAEIVARLAEGEVIDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEILNIGETVKVQVIKINKDTQRISLGMKQLQADPWDTVEAKYPIGSKHVGRVTNITDYGAFVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVLVLEIDGQKRRVSLGLKQTQGNPWENFAASHPNGTQVEGEVKNITEFGLFVGLEGDIDGMVHLSDLDWNRSGEDAIQDYRKGDIVQAVVTDVDVEKERISLSIKQVAADPFAEAVAGVKRGDIVTVTVTAIEDGGIEVEADGMKSFIRRSDLSRDRAEQRPERFTKGDKIDARITNIDPKTRRLGLSIKAREIAEEKEAVEQYGSSDSGASLGDILGAALKKRGDN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU9</accession>
    <name>A0A2M9PEU9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Electron transfer flavoprotein-ubiquinone oxidoreductase</fullName>
            <shortName evidence="9">ETF-QO</shortName>
            <ecNumber evidence="9">1.5.5.1</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="10" type="ORF">CNY89_04715</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Accepts electrons from ETF and reduces ubiquinone.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="9">
            <text>a ubiquinone + reduced [electron-transfer flavoprotein] = a ubiquinol + H(+) + oxidized [electron-transfer flavoprotein]</text>
            <dbReference type="Rhea" id="RHEA:24052"/>
            <dbReference type="Rhea" id="RHEA-COMP:9565"/>
            <dbReference type="Rhea" id="RHEA-COMP:9566"/>
            <dbReference type="Rhea" id="RHEA-COMP:10685"/>
            <dbReference type="Rhea" id="RHEA-COMP:10686"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:16389"/>
            <dbReference type="ChEBI" id="CHEBI:17976"/>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
            <dbReference type="ChEBI" id="CHEBI:58307"/>
            <dbReference type="EC" id="1.5.5.1"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="1 9">
            <name>FAD</name>
            <dbReference type="ChEBI" id="CHEBI:57692"/>
        </cofactor>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="9">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
        <text evidence="9">Binds 1 [4Fe-4S] cluster.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="1.5.5.1" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000205">
        <property type="protein sequence ID" value="PJN96075.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004174">
        <property type="term" value="F:electron-transferring-flavoprotein dehydrogenase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.50.50.60">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040156">
        <property type="entry name" value="ETF-QO"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036188">
        <property type="entry name" value="FAD/NAD-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10617">
        <property type="entry name" value="PTHR10617"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51905">
        <property type="entry name" value="SSF51905"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 9" id="KW-0249">Electron transport</keyword>
    <keyword evidence="4 9" id="KW-0274">FAD</keyword>
    <keyword evidence="3 9" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="9" id="KW-0408">Iron</keyword>
    <keyword evidence="7 9" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="9" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="6 9" id="KW-0560">Oxidoreductase</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 9" id="KW-0813">Transport</keyword>
    <keyword evidence="8 9 10" id="KW-0830">Ubiquinone</keyword>
    <feature type="non-terminal residue" evidence="10">
        <location>
            <position position="289"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001974"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022630"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022827"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022982"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023002"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023075"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU366068"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96075.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="289" mass="31226" checksum="1583AE1B239AB4C2" modified="2018-04-25" version="1" fragment="single">MDFDVVIVGAGPAGLAAAIRLRQLAEEAGTDLSVVVLEKGSEVGAHILSGAVIDPIGLDRLIPDWRERGAPVTQEVTTDRFLYLTEVGSVRLPNFAMPPFMSNHGNYIVSLGDVVRWLGEQAEAAGVEIYPGFPATEILTDDAGAVTGVATGDLGVLRDGRPGPNFARGMELNGKYVLVAEGARGSLSKELIARFGLDAESGPQKYGIGLKELWQVAPEKHRPGLAQHSFGWPLDNRTGGGSFLYHYGDNLVSVGFVVHLNYRNPWLSPFEEFQRFKTHPDIRDTFEGG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEV0</accession>
    <name>A0A2M9PEV0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">UDP-N-acetylglucosamine 1-carboxyvinyltransferase</fullName>
            <ecNumber evidence="7">2.5.1.7</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Enoylpyruvate transferase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">UDP-N-acetylglucosamine enolpyruvyl transferase</fullName>
            <shortName evidence="7">EPT</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7 9" type="primary">murA</name>
        <name evidence="9" type="ORF">CNY89_05060</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Cell wall formation. Adds enolpyruvyl to UDP-N-acetylglucosamine.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="7">
            <text>phosphoenolpyruvate + UDP-N-acetyl-alpha-D-glucosamine = phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-alpha-D-glucosamine</text>
            <dbReference type="Rhea" id="RHEA:18681"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="ChEBI" id="CHEBI:68483"/>
            <dbReference type="EC" id="2.5.1.7"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="7">Cell wall biogenesis; peptidoglycan biosynthesis.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the EPSP synthase family. MurA subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.7" evidence="7"/>
    <dbReference type="EMBL" id="PHNO01000225">
        <property type="protein sequence ID" value="PJN96014.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00219"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008760">
        <property type="term" value="F:UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0007049">
        <property type="term" value="P:cell cycle"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0071555">
        <property type="term" value="P:cell wall organization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009252">
        <property type="term" value="P:peptidoglycan biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008360">
        <property type="term" value="P:regulation of cell shape"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019277">
        <property type="term" value="P:UDP-N-acetylgalactosamine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01555">
        <property type="entry name" value="UdpNAET"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.65.10.10">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00111">
        <property type="entry name" value="MurA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001986">
        <property type="entry name" value="Enolpyruvate_Tfrase_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036968">
        <property type="entry name" value="Enolpyruvate_Tfrase_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013792">
        <property type="entry name" value="RNA3'P_cycl/enolpyr_Trfase_a/b"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005750">
        <property type="entry name" value="UDP_GlcNAc_COvinyl_MurA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00275">
        <property type="entry name" value="EPSP_synthase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55205">
        <property type="entry name" value="SSF55205"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01072">
        <property type="entry name" value="murA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 7" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="1 7" id="KW-0132">Cell division</keyword>
    <keyword evidence="3 7" id="KW-0133">Cell shape</keyword>
    <keyword evidence="6 7" id="KW-0961">Cell wall biogenesis/degradation</keyword>
    <keyword evidence="7" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 7" id="KW-0573">Peptidoglycan synthesis</keyword>
    <keyword evidence="7" id="KW-0670">Pyruvate</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 7 9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="EPSP_synthase" evidence="8">
        <location>
            <begin position="7"/>
            <end position="409"/>
        </location>
    </feature>
    <feature type="region of interest" description="Phosphoenolpyruvate binding" evidence="7">
        <location>
            <begin position="22"/>
            <end position="23"/>
        </location>
    </feature>
    <feature type="region of interest" description="UDP-N-acetylglucosamine binding" evidence="7">
        <location>
            <begin position="123"/>
            <end position="127"/>
        </location>
    </feature>
    <feature type="active site" description="Proton donor" evidence="7">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="94"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="308"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="7">
        <location>
            <position position="330"/>
        </location>
        <ligand>
            <name>UDP-N-acetyl-alpha-D-glucosamine</name>
            <dbReference type="ChEBI" id="CHEBI:57705"/>
        </ligand>
    </feature>
    <feature type="modified residue" description="2-(S-cysteinyl)pyruvic acid O-phosphothioketal" evidence="7">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022618"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022960"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022984"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023306"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023316"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00111"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF00275"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96014.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="424" mass="44908" checksum="AF6A89FD2D67536B" modified="2018-04-25" version="1">MDSILVRGGRRLQGRIPISGAKNACLALMPAALLSEEPLTLTNAPRLSDIRTMTELLESLGCEVASLQGGRVLAVGALAISNHRADYDIVRKMRASILVLGPMLARDGHAVVSLPGGCAIGARPVDLHLKGLEALGAELELREGYVHAKAATGLKGATFEFPMVSVGATENLLMAATLAKGTTVLKNAAQEPEIVDLARCLRAMGAQIEGEGTGTIEIQGVDRLFGATHPVVADRIELGTYMLAPAITGGEVELTGGRRELVTAFADKLEEAGVTVEDTETGLKVSRQNGRLLPVDVETAPFPGFPTDLQAQMMALLTLADGVSRLEERIFENRFMHAPELARMGARIEVHGGTATVTGVERLKGAPVMATDLRASVSLILAGLAAEGETRVARVYHLDRGYERVEEKLSACGAEIERVTERAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF69</accession>
    <name>A0A2M9PF69_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03970</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000168">
        <property type="protein sequence ID" value="PJN96197.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="87"/>
            <end position="115"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="87"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96197.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="115" mass="12819" checksum="AAA3210D3502D030" modified="2018-04-25" version="1">MHLEGPRIVLTEISCSEATRRLGEALHAMLSLADHIAAQANSADPEVGNRLCLSAQRICDQVEIVSKALSRMDPRVARILEEVAREKAAEARRDDHRRDLLLVNSPAEPDWNPPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PF99</accession>
    <name>A0A2M9PF99_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Sugar ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03905</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Cell inner membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="5">Cell membrane</location>
            <topology evidence="5">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="5">Belongs to the binding-protein-dependent transport system permease family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000165">
        <property type="protein sequence ID" value="PJN96211.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0055085">
        <property type="term" value="P:transmembrane transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06261">
        <property type="entry name" value="TM_PBP2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000515">
        <property type="entry name" value="MetI-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035906">
        <property type="entry name" value="MetI-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00528">
        <property type="entry name" value="BPD_transp_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF161098">
        <property type="entry name" value="SSF161098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50928">
        <property type="entry name" value="ABC_TM1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="5" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="21"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="95"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="128"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="175"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="221"/>
            <end position="243"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="284"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transmembrane type-1" evidence="6">
        <location>
            <begin position="91"/>
            <end position="304"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU363032"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="PROSITE" id="PS50928"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96211.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="317" mass="34805" checksum="82E52D0FA977007F" modified="2018-04-25" version="1">MKAIDAPLRAWQRVAGIGGMAGFFLLPNMAIFGVFVLLPLVINFVYSTTAGNAIFLSERSFVGLQQYARLFDCGTILDPNSCAEDAFWTAAGNTFWFVVLQVTLMIAAALVTALILNREIRGRGFWRAMFFFPVLLSPVVVGLIWRWILQRQGLLNFTLLPFGHQPFAWLTDPTWAFAAAVGVSVWAHMGFYTLILLAGLQAIPRDLYEAAEMDGTRPGRVFRRITLPLLWPNLIVVIVLALIKAVQIFDEVYVLTGGGPGTSTLFLTQYIYETGFASQLRNPGLAAAASILMGLVLVALTLAQLGLGRKDKKGADE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFE0</accession>
    <name>A0A2M9PFE0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03955</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000167">
        <property type="protein sequence ID" value="PJN96204.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96204.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="8182" checksum="AED58B2D770681F6" modified="2018-04-25" version="1">MSVTMPHYAKTSLLGLIGYGLHSAFRTFSEASLGVRCAREAQRLSALSELDLARLGIRRDEIFERAFAPLRRT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFG0</accession>
    <name>A0A2M9PFG0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Magnesium transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_03475</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2">Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000142">
        <property type="protein sequence ID" value="PJN96283.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046873">
        <property type="term" value="F:metal ion transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045861">
        <property type="entry name" value="CorA_cytoplasmic_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045863">
        <property type="entry name" value="CorA_TM1_TM2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002523">
        <property type="entry name" value="MgTranspt_CorA/ZnTranspt_ZntB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01544">
        <property type="entry name" value="CorA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF143865">
        <property type="entry name" value="SSF143865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF144083">
        <property type="entry name" value="SSF144083"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="157"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="188"/>
            <end position="208"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009765"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96283.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="214" mass="24336" checksum="D9449A27B75863DF" modified="2018-04-25" version="1" fragment="single">SVRHGASTSYGRVRQHWESCPSVLAKGQDFILYAILDFIVDNYMPVIEAIADEVDSIEDMVLVRPMEQEEIERLYVLRRDLLRLRNAAGPLVDVCRRLTSPDLTQIGPEMHSYFRDVTDHIRGVEEKIDALREVLAFAFETSLLMGQAQSTAVAKKLASWAAILAVPTALAGIYGMNFKYMPELDSHWGYYAVVGTMVTVCTILYWRFRRSGWL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFJ8</accession>
    <name>A0A2M9PFJ8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Elongation factor P</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_03395</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000137">
        <property type="protein sequence ID" value="PJN96299.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003746">
        <property type="term" value="F:translation elongation factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046247">
        <property type="entry name" value="DUF6280"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19796">
        <property type="entry name" value="DUF6280"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0251">Elongation factor</keyword>
    <keyword evidence="1" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96299.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="106" mass="11700" checksum="799C62B952763477" modified="2018-04-25" version="1">MFDSVDQVAFTNDQGARAQKLFAAVVLAALDDAIADDKKYGNGPEVIARWARSRDGREVLMCAGIDPNERTVKGMMDFVRKGVRTSVALSREESERQHQRSEAEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFL7</accession>
    <name>A0A2M9PFL7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">IS481 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03240</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000131">
        <property type="protein sequence ID" value="PJN96319.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00665">
        <property type="entry name" value="rve"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="64"/>
            <end position="142"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="142"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96319.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="142" mass="15789" checksum="ABF289890E556373" modified="2018-04-25" version="1" fragment="single">MSGDDEAIIVAFRRHTLLPLDDCLYSLQATIPHLTRSSLHRCLQRHGVSRLPDVEGDKPARKKFKAYPIGFFHIDIAEVQTAEGKLYLYVGIDRTSKFAFAWLADKATTVTARAFLDALAAAGPYKIEIVLTDNGIQFADLP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW2</accession>
    <name>A0A2M9PFW2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Methyltransferase</fullName>
            <ecNumber evidence="3">2.1.1.-</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02670</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="3">Belongs to the N(4)/N(6)-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.-" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000103">
        <property type="protein sequence ID" value="PJN96418.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008170">
        <property type="term" value="F:N-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006306">
        <property type="term" value="P:DNA methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002941">
        <property type="entry name" value="DNA_methylase_N4/N6"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001091">
        <property type="entry name" value="RM_Methyltransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01555">
        <property type="entry name" value="N6_N4_Mtase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00508">
        <property type="entry name" value="S21N4MTFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="N6_N4_Mtase" evidence="4">
        <location>
            <begin position="167"/>
            <end position="218"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU362026"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96418.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="249" mass="26860" checksum="0F676EC51EE73E5B" modified="2018-04-25" version="1">MIRREVIIGDCRLLLGDAREILPTLQVDHIITAPPFSERTHTGHDGGAMRGRDGSARAQLGYGALSEADAQDLAALFAAASSGWVCWFTDHTLAPVVQAALAAEGRYVFAPLPFYQPGRSVRLTGDGPCSWTDWIICARTKALNKWGTLPGGYVAGQGWKDKERMGGKPLPLMRLVVGDYSRVGDLVCDPCMGGGTTLVACAHMGRRGIGIEIDEATFDRACKRTRDAYAQPDMFVAPPVAPKQEAMEL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="18" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW8</accession>
    <name>A0A2M9PFW8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">ATP-dependent Clp protease ATP-binding subunit ClpX</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">clpX</name>
        <name evidence="9" type="ORF">CNY89_02565</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.</text>
    </comment>
    <comment type="subunit">
        <text evidence="6">Component of the ClpX-ClpP complex. Forms a hexameric ring that, in the presence of ATP, binds to fourteen ClpP subunits assembled into a disk-like structure with a central cavity, resembling the structure of eukaryotic proteasomes.</text>
    </comment>
    <comment type="similarity">
        <text evidence="6 7">Belongs to the ClpX chaperone family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000099">
        <property type="protein sequence ID" value="PJN96436.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0140662">
        <property type="term" value="F:ATP-dependent protein folding chaperone"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008233">
        <property type="term" value="F:peptidase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046983">
        <property type="term" value="F:protein dimerization activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051082">
        <property type="term" value="F:unfolded protein binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006508">
        <property type="term" value="P:proteolysis"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="6.20.220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00175">
        <property type="entry name" value="ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003959">
        <property type="entry name" value="ATPase_AAA_core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019489">
        <property type="entry name" value="Clp_ATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004487">
        <property type="entry name" value="Clp_protease_ATP-bd_su_ClpX"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046425">
        <property type="entry name" value="ClpX_bact"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010603">
        <property type="entry name" value="Znf_CppX_C4"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038366">
        <property type="entry name" value="Znf_CppX_C4_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07724">
        <property type="entry name" value="AAA_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10431">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06689">
        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM01086">
        <property type="entry name" value="ClpB_D2-small"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00994">
        <property type="entry name" value="zf-C4_ClpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00382">
        <property type="entry name" value="clpX"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51902">
        <property type="entry name" value="CLPX_ZB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4 6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="5 6 7" id="KW-0143">Chaperone</keyword>
    <keyword evidence="9" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="1 6 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="2 6" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="9" id="KW-0645">Protease</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6 7" id="KW-0862">Zinc</keyword>
    <feature type="domain" description="ClpX-type ZB" evidence="8">
        <location>
            <begin position="3"/>
            <end position="56"/>
        </location>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="15"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="18"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="37"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6 7">
        <location>
            <position position="40"/>
        </location>
        <ligand>
            <name>Zn(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:29105"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="6">
        <location>
            <begin position="119"/>
            <end position="126"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00175"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01250"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96436.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="421" mass="46240" checksum="2FDC203106D500BB" modified="2018-04-25" version="1">MSKSSGGDAKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREETKSNLVKSSDGVPTPHEICKVLDDYVIGQKVAKRVLSVAVHNHYKRLNHATKNSDVELQKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQSAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGRGSAMGFGAEVKDPDERRVGELFQALEPEDLLKFGLIPEFVGRLPVLATLTDLDEAALMTILTEPKNALIKQYQRLFEMEDVQLTFTEDALRAIAKRAIERKTGARGLRSILEEVLLDTMFELPSMQGVAEAVVNEDCILRKGEPLLIYVDRKEGSATAS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFX8</accession>
    <name>A0A2M9PFX8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">ATPase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02450</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000093">
        <property type="protein sequence ID" value="PJN96455.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027785">
        <property type="entry name" value="UvrD-like_helicase_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13538">
        <property type="entry name" value="UvrD_C_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AAA" evidence="1">
        <location>
            <begin position="40"/>
            <end position="293"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00382"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96455.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="507" mass="54369" checksum="71F88933A1DFEB71" modified="2018-04-25" version="1">MGGGVEFSADQAAARARILAALKGAGVDVEAGASLAEGEAQEPLAVLGRAGSGKTVLLANIVEGLIAAGVEPVSGDYEGRRAGRRRTVAVLAPTNKAAHVLRLRGVPATTIHRVLYTPLYHPDYEAIAEWLTGKAERPKVEGMAEESLDRAKASYDVHGSIPGALAAAGLRGSDFIQGWKRRDEPLDIGLIDESSMLDTRQFEDLASLCRTLVLFGDPAQLAPVMGGGAMVFDSFPEERRLVLGRVHRQAAGNPIIDLAHSLGDPAMSFEAFEDSLYAIARRDDRVVVAPRVDAAAMARAPVLVWRNDTRVRLIDAFRRAHGAPPDELLPGEPLVCDGIELPLKHRKKRVDLEARGLTKGAQAIYIGAGRRPGFARLFMPGAEDPQIAVASIIQIEAPGAAEPVITTAATMGAVFLHGAAVTIHKAQGSQWKEVQVFAPDLYAAARSGREEGGAPLWKRLAYVAITRAEERLFWVTRYALSRPEGPLGIEDLPRRVPSQLRLQPEPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG17</accession>
    <name>A0A2M9PG17_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02205</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000081">
        <property type="protein sequence ID" value="PJN96497.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.30.390">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011722">
        <property type="entry name" value="Hemimethylated_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036623">
        <property type="entry name" value="Hemimethylated_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08755">
        <property type="entry name" value="YccV-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00992">
        <property type="entry name" value="YccV-like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF141255">
        <property type="entry name" value="SSF141255"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02097">
        <property type="entry name" value="yccV"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YccV-like" evidence="1">
        <location>
            <begin position="5"/>
            <end position="105"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00992"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96497.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="109" mass="12507" checksum="CB0E88FB62741B9A" modified="2018-04-25" version="1">METTTAKFALGQVVRHRIHPFRGVVFDVDPSFNNTDEWWESIPEDSRPRKDQPFYHLLAENDTTYYVAYVSEQNLVRDESGEPVDHPEVAELFGALDDLGRYAVGSPLH</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG22</accession>
    <name>A0A2M9PG22_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02235</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="2">Belongs to the bacterial histone-like protein family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000083">
        <property type="protein sequence ID" value="PJN96488.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030527">
        <property type="term" value="F:structural constituent of chromatin"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="4.10.520.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000119">
        <property type="entry name" value="Hist_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010992">
        <property type="entry name" value="IHF-like_DNA-bd_dom_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33175">
        <property type="entry name" value="PTHR33175"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00216">
        <property type="entry name" value="Bac_DNA_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01727">
        <property type="entry name" value="DNABINDINGHU"/>
    </dbReference>
    <dbReference type="SMART" id="SM00411">
        <property type="entry name" value="BHL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47729">
        <property type="entry name" value="SSF47729"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="1 3" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003939"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96488.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="96" mass="10191" checksum="19A0CB333012E420" modified="2018-04-25" version="1">MTQKPMTKTQLVAAMAEAAGLDKTAANKALEALTDIVTREVAAGGAVNLPGLGKFACRDRPEREVRNPSTGEKMTKPADRIAKVTISKQLKDVINA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG23</accession>
    <name>A0A2M9PG23_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2 9">DNA-binding transcriptional regulator NtrC</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Nitrogen regulation protein NR(I)</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9 13" type="primary">ntrC</name>
        <name evidence="13" type="ORF">CNY89_02170</name>
    </gene>
    <organism evidence="13 14">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="13 14" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="13 14">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="9">Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1 9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="13">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000080">
        <property type="protein sequence ID" value="PJN96500.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000156">
        <property type="term" value="F:phosphorelay response regulator activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009399">
        <property type="term" value="P:nitrogen fixation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006808">
        <property type="term" value="P:regulation of nitrogen utilization"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003593">
        <property type="entry name" value="AAA+_ATPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011006">
        <property type="entry name" value="CheY-like_superfamily"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009057">
        <property type="entry name" value="Homeobox-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002197">
        <property type="entry name" value="HTH_Fis"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001789">
        <property type="entry name" value="Sig_transdc_resp-reg_receiver"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002078">
        <property type="entry name" value="Sigma_54_int"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025662">
        <property type="entry name" value="Sigma_54_int_dom_ATP-bd_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010114">
        <property type="entry name" value="Transcript_reg_NtrC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02954">
        <property type="entry name" value="HTH_8"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00072">
        <property type="entry name" value="Response_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00158">
        <property type="entry name" value="Sigma54_activat"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01590">
        <property type="entry name" value="HTHFIS"/>
    </dbReference>
    <dbReference type="SMART" id="SM00382">
        <property type="entry name" value="AAA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00448">
        <property type="entry name" value="REC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46689">
        <property type="entry name" value="SSF46689"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52172">
        <property type="entry name" value="SSF52172"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01818">
        <property type="entry name" value="ntrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50110">
        <property type="entry name" value="RESPONSE_REGULATORY"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00675">
        <property type="entry name" value="SIGMA54_INTERACT_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50045">
        <property type="entry name" value="SIGMA54_INTERACT_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="9" id="KW-0010">Activator</keyword>
    <keyword evidence="4 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="9" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="9" id="KW-0535">Nitrogen fixation</keyword>
    <keyword evidence="3 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="8" id="KW-0597">Phosphoprotein</keyword>
    <keyword evidence="14" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="9" id="KW-0678">Repressor</keyword>
    <keyword evidence="7 9" id="KW-0804">Transcription</keyword>
    <keyword evidence="6 9" id="KW-0805">Transcription regulation</keyword>
    <keyword evidence="5 9" id="KW-0902">Two-component regulatory system</keyword>
    <feature type="domain" description="Response regulatory" evidence="12">
        <location>
            <begin position="5"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma-54 factor interaction" evidence="11">
        <location>
            <begin position="141"/>
            <end position="369"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="10">
        <location>
            <begin position="119"/>
            <end position="140"/>
        </location>
    </feature>
    <feature type="modified residue" description="4-aspartylphosphate" evidence="8">
        <location>
            <position position="54"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004496"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019059"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023012"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00169"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="RuleBase" id="RU365013"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="11">
        <source>
            <dbReference type="PROSITE" id="PS50045"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="12">
        <source>
            <dbReference type="PROSITE" id="PS50110"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="13">
        <source>
            <dbReference type="EMBL" id="PJN96500.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="14">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="483" mass="53430" checksum="CB9A66F3E91DD404" modified="2018-04-25" version="1">MMEGTILVADDDRSIRTVLAQALTRAGCRVRATGTASTLWRWIEEGEGDVVVTDVMMPDGDALDLLPAIRKRRPGLPVIVMSAQNTVMTAIRAAEVGAYEYLPKPFDLKEVLAQVSKALNQKSRPPTPAEEEPVGGENLPLIGRSPAMQEVYRILARLMNTDLGVMITGESGTGKELVARALHNFGLRKKGPFVAINMAAIPRDLIETELFGHEKGAFTGADRSMPGKFEQARGGTLFLDEVGDMPLDAQTRLLRVLQEGEYTRVGGRDLQTADVRIIAATHQDLRGLINEGRFREDLFYRLNVVPIRLPPLRERLDDVPDLARAFLRKAESEGLARKTVSKEALDILKKQDWSGNVRELENLMRRLCVLCPDDVISGAVVTQEISARPSSAAAGPAAQPQRLSQAIEAHLRRYFDLHGDSLPPDGLYDRILKEMELPLIALSLAATRGNQVRTAELLGINRNTLRKKIKDLDIRVTRGKRMM</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG62</accession>
    <name>A0A2M9PG62_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">EamA family transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02000</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000073">
        <property type="protein sequence ID" value="PJN96528.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000620">
        <property type="entry name" value="EamA_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00892">
        <property type="entry name" value="EamA"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="20"/>
            <end position="37"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="49"/>
            <end position="67"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="137"/>
            <end position="155"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="161"/>
            <end position="179"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="191"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="218"/>
            <end position="237"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="249"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="274"/>
            <end position="293"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="18"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="domain" description="EamA" evidence="2">
        <location>
            <begin position="161"/>
            <end position="290"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96528.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="298" mass="31808" checksum="8016FC742D1AE96B" modified="2018-04-25" version="1">MTAASEIAPHRPASQPLKALAWMMMAIASFAAMAVGGREIQAEMNTFELMLYRSAIGFAVVVAIAAARGGLGTVWRTRHARLHVTRNLFHYAGQNLWFFAVALIPLSQLTALEFTNPIWVAVLAPFLLGEKLTRARLVAAGLGFCGVLVVAQPGVSPFGPGHAAALAAGFCFALNTLFTRKIMAFDPVMCVLFWMTLSQGLMSLILSLPGGVPIPSAAILPWIVVVGLTGITAHYALTSALRFAPANVVAPMEFLRLPILATVGMLMYGEPLRIAVFVGAAIIIAGNLVSLRAETRRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGD5</accession>
    <name>A0A2M9PGD5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01630</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000059">
        <property type="protein sequence ID" value="PJN96591.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="88"/>
            <end position="146"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="132"/>
            <end position="146"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96591.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="175" mass="18499" checksum="699F322FE70D4AF5" modified="2018-04-25" version="1">MSPQRRLAAPATRWPTLTSTDWRKGLPLSAKHLCGDVGEPGAEPDVVEGEQLGVLLLELQRGLAPALHGLELAPQLGVLRVDAGIGAEVGDEARQRGGGPDRPVEAGGDPVDQVGADLFDPGVVDAPEQEQPEQGEGERRHREAAHAAQVVRGLITVERHAHASCRARLVTGRPP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE4</accession>
    <name>A0A2M9PGE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Branched-chain alpha-keto acid dehydrogenase subunit E2</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01495</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>(R)-lipoate</name>
            <dbReference type="ChEBI" id="CHEBI:83088"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000053">
        <property type="protein sequence ID" value="PJN96618.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0045254">
        <property type="term" value="C:pyruvate dehydrogenase complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004742">
        <property type="term" value="F:dihydrolipoyllysine-residue acetyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006096">
        <property type="term" value="P:glycolytic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003016">
        <property type="entry name" value="2-oxoA_DH_lipoyl-BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006256">
        <property type="entry name" value="AcTrfase_Pyrv_DH_cplx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000089">
        <property type="entry name" value="Biotin_lipoyl"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011053">
        <property type="entry name" value="Single_hybrid_motif"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43178:SF2">
        <property type="entry name" value="PTHR43178:SF2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00364">
        <property type="entry name" value="Biotin_lipoyl"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51230">
        <property type="entry name" value="SSF51230"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50968">
        <property type="entry name" value="BIOTINYL_LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00189">
        <property type="entry name" value="LIPOYL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0450">Lipoyl</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Lipoyl-binding" evidence="3">
        <location>
            <begin position="3"/>
            <end position="77"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001938"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022823"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS50968"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96618.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="9465" checksum="A180ED769D59EA5C" modified="2018-04-25" version="1" fragment="single">MSTIEVKVPDIGDFKDVPVISVMVKAGDTVAADDPLVELESDKATLEVPSPIAGKIKEIKIAEGDKVSEGVLLLLLEVANAAAASVEPGKPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGI1</accession>
    <name>A0A2M9PGI1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01375</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000047">
        <property type="protein sequence ID" value="PJN96636.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96636.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="88" mass="9690" checksum="C40578E3A2AAB95D" modified="2018-04-25" version="1">MKNRLVRTLRTYQPEVRSMVRVKSTGVTAIFVMFMPEIFPSAFGATAAKVSGSIAEGGLRQPLTDMNRMKRRLIGERSSISAWIAGSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ4</accession>
    <name>A0A2M9PGJ4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">DNA (cytosine-5-)-methyltransferase</fullName>
            <ecNumber evidence="2">2.1.1.37</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_01350</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine</text>
            <dbReference type="Rhea" id="RHEA:13681"/>
            <dbReference type="Rhea" id="RHEA-COMP:11369"/>
            <dbReference type="Rhea" id="RHEA-COMP:11370"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:57856"/>
            <dbReference type="ChEBI" id="CHEBI:59789"/>
            <dbReference type="ChEBI" id="CHEBI:85452"/>
            <dbReference type="ChEBI" id="CHEBI:85454"/>
            <dbReference type="EC" id="2.1.1.37"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.1.1.37" evidence="2"/>
    <dbReference type="EMBL" id="PHNO01000046">
        <property type="protein sequence ID" value="PJN96642.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003886">
        <property type="term" value="F:DNA (cytosine-5-)-methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009307">
        <property type="term" value="P:DNA restriction-modification system"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018117">
        <property type="entry name" value="C5_DNA_meth_AS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001525">
        <property type="entry name" value="C5_MeTfrase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00145">
        <property type="entry name" value="DNA_methylase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00105">
        <property type="entry name" value="C5METTRFRASE"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00094">
        <property type="entry name" value="C5_MTASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51679">
        <property type="entry name" value="SAM_MT_C5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3 7 9" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0680">Restriction system</keyword>
    <keyword evidence="5 7" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="4 7 9" id="KW-0808">Transferase</keyword>
    <feature type="region of interest" description="Disordered" evidence="8">
        <location>
            <begin position="205"/>
            <end position="335"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="8">
        <location>
            <begin position="264"/>
            <end position="311"/>
        </location>
    </feature>
    <feature type="active site" evidence="7">
        <location>
            <position position="98"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000743"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011975"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022603"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022747"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU01016"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96642.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="393" mass="41636" checksum="96EA37726B0B5879" modified="2018-04-25" version="1">MHDLALPSSGDTSGAGDACLLGLSLCSGAGGLDLGLTIAIPGYRAVGHVERETYAAATLVARMEDASLDRAPLWDDVATFDGRPWRGAVDIVTAGYPCQPFSVAGKRRGADDPRHLWPHVARVIAEVEPPFVFLENVAHHLRLGFPEVAAGLVGMGYRLAAGLFTAAEVGAPHKRERLFILAIREGDDLADPARLLWHPVEWRQPDGTAAPLADAPRQRQREPADQTDAIAGGGAAWDEPGNHSGALADAADRQFPQPGWRAEGRKGSEPDGAGLADADGERRLQAERGQPADSRPDPCGRDVDDADGPRSQGWGDDLGKHAGERPAWPPGPGDADGWERYLRCAPDLEPAVRRGADGLAHRVDRLRLCGNGVVPLVAAHALRTLAAELLADG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGJ7</accession>
    <name>A0A2M9PGJ7_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="8">Phosphoribosylaminoimidazole-succinocarboxamide synthase</fullName>
            <ecNumber evidence="8">6.3.2.6</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="8">SAICAR synthetase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="8" type="primary">purC</name>
        <name evidence="10" type="ORF">CNY89_01130</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 8">
            <text>5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + ATP + L-aspartate = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H(+) + phosphate</text>
            <dbReference type="Rhea" id="RHEA:22628"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:29991"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58443"/>
            <dbReference type="ChEBI" id="CHEBI:77657"/>
            <dbReference type="ChEBI" id="CHEBI:456216"/>
            <dbReference type="EC" id="6.3.2.6"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 8">Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 1/2.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 8">Belongs to the SAICAR synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.3.2.6" evidence="8"/>
    <dbReference type="EMBL" id="PHNO01000039">
        <property type="protein sequence ID" value="PJN96673.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00074">
        <property type="reaction ID" value="UER00131"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004639">
        <property type="term" value="F:phosphoribosylaminoimidazolesuccinocarboxamide synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006189">
        <property type="term" value="P:'de novo' IMP biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009236">
        <property type="term" value="P:cobalamin biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd01415">
        <property type="entry name" value="SAICAR_synt_PurC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00137">
        <property type="entry name" value="SAICAR_synth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028923">
        <property type="entry name" value="SAICAR_synt/ADE2_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR033934">
        <property type="entry name" value="SAICAR_synt_PurC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001636">
        <property type="entry name" value="SAICAR_synth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018236">
        <property type="entry name" value="SAICAR_synthetase_CS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01259">
        <property type="entry name" value="SAICAR_synt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00081">
        <property type="entry name" value="purC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01057">
        <property type="entry name" value="SAICAR_SYNTHETASE_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01058">
        <property type="entry name" value="SAICAR_SYNTHETASE_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7 8" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="4 8" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 8" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="6 8" id="KW-0658">Purine biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="SAICAR_synt" evidence="9">
        <location>
            <begin position="7"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000706"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004672"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010190"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00137"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="Pfam" id="PF01259"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN96673.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="253" mass="28675" checksum="98921D41512EC3AE" modified="2018-04-25" version="1">MARRRMIYEGKAKILYEGPEPDTLIQYFKDEATAFNAEKKAVIEGKGVLNNRLSEHFMSGLNAIGVPTHFIRRLNMREQLIRMVEMIPLEVVVRNYAAGSISKRLGIPEGQQLPRPIIEFYYKDDALGDPIVSEEHIVAFNWAGQQDIDDMIALALRVNDFLSGMFLGVGIRLVDFKIEIGRVYDGDFQRLIVADEISPDSCRLWDIETGRKLDKDVFRQDLGNLADAYTEVARRLGVMPKTNGRTTGPKLVN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK2</accession>
    <name>A0A2M9PGK2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Terminase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_01260</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000043">
        <property type="protein sequence ID" value="PJN96652.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005021">
        <property type="entry name" value="Terminase_largesu_Lambdalike"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR41287">
        <property type="entry name" value="PTHR41287"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03354">
        <property type="entry name" value="Terminase_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96652.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="573" mass="62991" checksum="54EE01D89DC4815F" modified="2018-04-25" version="1">MALDWNFACPDWEQRLRDGRSLVPDLPLNRVEAARSIDIFNRLRLPDVPGQPTMADAAGDWFRDIVGSVFGSIDEKGRRRVREVFGLVPKKNSKTTGGAAMMLTALLMNERPRAEFLLVGPTQDVADTAFQQAVGMIEADPDGYLQKRFDPKEHLKTINDLLNGSKLRIKTFDMRVLTGSKPVGILIDELHIMSLSSYASRVVGQMRGGLLANREGFLLIITTQSDQPPAGVFKAELQYARSVRDGTITGSRMLPILYEFPEKMQTGADAPWRDPANWPMVTPNLGLSIDLDTLIADYRDAKAKGIEEERRWASQHLNVEIGLALHSERWRGADHWLAAIEPELTLEDILQRSEVVTVGIDGGGLDDLLGLAVLGRCKDTRKWMLWTHAWCHRSVLELRKDIAEKLRDLERDGDLTVVDDESTQDQEDVADIVEDIHDRRLLPASAGIGVDASGIDAVGDELDARGVGGQPRIATIGQGYQLNGAILGMELRLANKTLVHCGQPLMTWCVGNAKAELSGSAVVIKKAAAGRAKIDPLMASFNAFKLMARSPQAPGGRISDFLSNPIVSGRRSA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGM1</accession>
    <name>A0A2M9PGM1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Stress-induced protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01045</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000036">
        <property type="protein sequence ID" value="PJN96688.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019626">
        <property type="entry name" value="Stress-induced_KGG_rpt"/>
    </dbReference>
    <dbReference type="Pfam" id="PF10685">
        <property type="entry name" value="KGG"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="11"/>
            <end position="26"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96688.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="8635" checksum="32D059199297409F" modified="2018-04-25" version="1">MQMSKTGDAESRRSGSFRDDPARAVEAGRKGGSLSGGNFKMNPARAAEAGRKGGQASGGNFKHDPQRASEAGRKGGGASRTRQA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGV3</accession>
    <name>A0A2M9PGV3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">5-hydroxyisourate hydrolase</fullName>
            <shortName evidence="6">HIU hydrolase</shortName>
            <shortName evidence="6">HIUHase</shortName>
            <ecNumber evidence="6">3.5.2.17</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="8" type="primary">uraH</name>
        <name evidence="8" type="ORF">CNY89_00695</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU).</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H(+)</text>
            <dbReference type="Rhea" id="RHEA:23736"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:15378"/>
            <dbReference type="ChEBI" id="CHEBI:18072"/>
            <dbReference type="ChEBI" id="CHEBI:58639"/>
            <dbReference type="EC" id="3.5.2.17"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="6">Homotetramer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="3.5.2.17" evidence="6"/>
    <dbReference type="EMBL" id="PHNO01000021">
        <property type="protein sequence ID" value="PJN96752.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0033971">
        <property type="term" value="F:hydroxyisourate hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006144">
        <property type="term" value="P:purine nucleobase metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd05822">
        <property type="entry name" value="TLP_HIUase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.40.180">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014306">
        <property type="entry name" value="Hydroxyisourate_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023418">
        <property type="entry name" value="Thyroxine_BS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023416">
        <property type="entry name" value="Transthyretin/HIU_hydrolase_d"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036817">
        <property type="entry name" value="Transthyretin/HIU_hydrolase_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR10395">
        <property type="entry name" value="PTHR10395"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00576">
        <property type="entry name" value="Transthyretin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49472">
        <property type="entry name" value="SSF49472"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02962">
        <property type="entry name" value="hdxy_isourate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00768">
        <property type="entry name" value="TRANSTHYRETIN_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5 6 8" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0659">Purine metabolism</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TR_THY" evidence="7">
        <location>
            <begin position="8"/>
            <end position="121"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001043"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00002704"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00009850"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022631"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU361270"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00576"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN96752.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="122" mass="13101" checksum="B7B38D5AFFA10CD5" modified="2018-04-25" version="1">MSGSDGYVTTHVLDAARGCPAAGLTVEVWRIEGDSRQLLRSLVTNDDGRTDTPPLPKGEATPGVYELVFHAGAYLDATFGAGEGPRFLDLVPIRFGIADPAVHHYHVPLLLSPYAYSTYRGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGW6</accession>
    <name>A0A2M9PGW6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Tricarboxylate transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_00540</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the UPF0065 (bug) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000016">
        <property type="protein sequence ID" value="PJN96780.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.190.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005064">
        <property type="entry name" value="BUG"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042100">
        <property type="entry name" value="Bug_dom1"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42928">
        <property type="entry name" value="PTHR42928"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="27"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014909485" evidence="2">
        <location>
            <begin position="28"/>
            <end position="361"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006987"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96780.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="361" mass="38703" checksum="84F817EAA74E79DB" modified="2018-04-25" version="1">MRTLTRSGLSLFALCAASFAAPAPVLAVDLSGETVEWTVPFGVGGGTDVWARFFAPQLSKALPGEPTVVVLNVPGGGSITGANQFYSRARPDGLSILGTSASTQYPAMLGDPRVRYDYADWTPILASPTGGVVYVQSSFEVDGPEDLETLRGIEMRFGSQGATQLEMPALLAFKMLGLKVKPVFGMESRGQGRLAFERGEAGIDFQTASAYLGSVVPLVEAGKAVPLFSLGFIDADGVLQRDPTFPDLPHFGEFFEAATGAPPEGEAFEAWRAMMLAGFSLQKMIVLPKDTPAEMIDAYRAAAQAIVDAPDFRERAGDEIGAYEQIIGEEADSALRKALDLDPAVREFMIQWLAEDYDVRL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGY1</accession>
    <name>A0A2M9PGY1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="13">UvrABC system protein A</fullName>
            <shortName evidence="13">UvrA protein</shortName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="13">Excinuclease ABC subunit A</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="13" type="primary">uvrA</name>
        <name evidence="16" type="ORF">CNY89_00795</name>
    </gene>
    <organism evidence="16 17">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="16 17" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="16 17">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="13">The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.</text>
    </comment>
    <comment type="subunit">
        <text evidence="13">Forms a heterotetramer with UvrB during the search for lesions.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="13">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="13">Belongs to the ABC transporter superfamily. UvrA family.</text>
    </comment>
    <comment type="caution">
        <text evidence="13 14">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="16">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000025">
        <property type="protein sequence ID" value="PJN96734.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016887">
        <property type="term" value="F:ATP hydrolysis activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008270">
        <property type="term" value="F:zinc ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1490.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00205">
        <property type="entry name" value="UvrA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003439">
        <property type="entry name" value="ABC_transporter-like_ATP-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017871">
        <property type="entry name" value="ABC_transporter-like_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013815">
        <property type="entry name" value="ATP_grasp_subdomain_1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004602">
        <property type="entry name" value="UvrA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041552">
        <property type="entry name" value="UvrA_DNA-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041102">
        <property type="entry name" value="UvrA_inter"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17755">
        <property type="entry name" value="UvrA_DNA-bind"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17760">
        <property type="entry name" value="UvrA_inter"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00630">
        <property type="entry name" value="uvra"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00211">
        <property type="entry name" value="ABC_TRANSPORTER_1"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50893">
        <property type="entry name" value="ABC_TRANSPORTER_2"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="9 13 14" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="1 13" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5 13" id="KW-0227">DNA damage</keyword>
    <keyword evidence="6 13" id="KW-0228">DNA excision</keyword>
    <keyword evidence="12 13" id="KW-0234">DNA repair</keyword>
    <keyword evidence="11 13" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="10 13" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="2 13" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="4 13 14" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="17" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 13" id="KW-0677">Repeat</keyword>
    <keyword evidence="13" id="KW-0742">SOS response</keyword>
    <keyword evidence="8 13" id="KW-0862">Zinc</keyword>
    <keyword evidence="7 13" id="KW-0863">Zinc-finger</keyword>
    <feature type="domain" description="ABC transporter" evidence="15">
        <location>
            <begin position="330"/>
            <end position="605"/>
        </location>
    </feature>
    <feature type="domain" description="ABC transporter" evidence="15">
        <location>
            <begin position="615"/>
            <end position="941"/>
        </location>
    </feature>
    <feature type="zinc finger region" description="C4-type" evidence="13">
        <location>
            <begin position="750"/>
            <end position="776"/>
        </location>
    </feature>
    <feature type="binding site" evidence="13">
        <location>
            <begin position="34"/>
            <end position="41"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <feature type="binding site" evidence="13 14">
        <location>
            <begin position="651"/>
            <end position="658"/>
        </location>
        <ligand>
            <name>ATP</name>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
        </ligand>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022771"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00022833"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="10">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="11">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="12">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="13">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00205"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="14">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00434"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="15">
        <source>
            <dbReference type="PROSITE" id="PS50893"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="16">
        <source>
            <dbReference type="EMBL" id="PJN96734.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="17">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="958" mass="105485" checksum="54BAC41E031198BC" modified="2018-04-25" version="1">MPEQKFIEIRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGVPYSPATGLPIEAQQVSQMVDIVMAQPEGTRAYLLAPIVRDRKGEYRKEFQELLKKGFQRVKVNGEFHDLDAPPTLDKKFRHDIDVVVDRIVVREGLETRLADSLRTALDLADGIAILETAPPAAEDGSVPDPERITFSENFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDPRLIVPDESVPLIKGAIAPWSKGQSPYFRQTIEALANHYKFSKTARWRDLPEEAKELMLFGSKGAKIKFRYDEGGRVYEIERPFEGVIPNMERRYRETDSAWSREDMERFQNNRPCGVCNGYRLKPEALAVKIAGVHISEVTRLSIREAHAWTEQVPATLTDQRNEIARAILKEIRERLGFLVNVGLDYLTLARNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNLRDAGNTVIVVEHDEEAIREADHVIDIGPGAGVHGGEIIAEGTPAEIAANPESITGQYLTGQREIAVPATRRKGNGKKLVVRNATGNNLRGVTAEFPLGTFTCVTGVSGGGKSTLTIETLFKTASMRLNGARQTPAPAEAVEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFGPIRDWFAGLPESKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGKRYNRETLEVLFKGKNISDVLDMTVEDAEAFFEAVPSIREKMTTLMRVGLSYVKVGQQATTLSGGEAQRVKLSKELARRSTGRTLYILDEPTTGLHFEDTRKLLDVLHELVEQGNTVVVIEHNLDVIKTADHIIDIGPEGGDGGGTIVGVGTPEKIAAISASHTGQYLRPLLEKRRVAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4M9</accession>
    <name>A0A2M9P4M9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29435</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004430">
        <property type="protein sequence ID" value="PJN92468.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="77"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92468.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="77" mass="8265" checksum="E6699B0E56322357" modified="2018-04-25" version="1" fragment="single">DFPESQLQIAGIGLQIRNWQLAQTAFQEAATLDPQLVGAALAASADFPESQLQIAGIGLQIRNWQLAQTAFQEAATL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4P3</accession>
    <name>A0A2M9P4P3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DUF305 domain-containing protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29070</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004283">
        <property type="protein sequence ID" value="PJN92512.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="1"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92512.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="35" mass="3670" checksum="973154343BF5C616" modified="2018-04-25" version="1" fragment="single">EAEADRVLGAPAPCTFNRSPESDPILWASEGGGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4R9</accession>
    <name>A0A2M9P4R9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_29055</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004276">
        <property type="protein sequence ID" value="PJN92513.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92513.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8418" checksum="8B4E02D59704DF82" modified="2018-04-25" version="1" fragment="single">APIAMTTPLSTPRPIGPASAIRAKTNSIGLIRQIARSAATSIRLIAAAGYGHPSQIMEEIARLTPTFAGVTYDKLDAEGSI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P4S2</accession>
    <name>A0A2M9P4S2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Integrase catalytic domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_29105</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01004293">
        <property type="protein sequence ID" value="PJN92508.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003676">
        <property type="term" value="F:nucleic acid binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015074">
        <property type="term" value="P:DNA integration"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.420.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001584">
        <property type="entry name" value="Integrase_cat-core"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012337">
        <property type="entry name" value="RNaseH-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036397">
        <property type="entry name" value="RNaseH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13683">
        <property type="entry name" value="rve_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53098">
        <property type="entry name" value="SSF53098"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50994">
        <property type="entry name" value="INTEGRASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Integrase catalytic" evidence="1">
        <location>
            <begin position="1"/>
            <end position="81"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="81"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="PROSITE" id="PS50994"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN92508.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="81" mass="8967" checksum="6A2C62F65BB32FB2" modified="2018-04-25" version="1" fragment="single">PDHSLVCDDPCKSLRGVPGHIRSDNGPEFIAKAVREWISAVGARTAFIEPGSPWENGYCESFNSKLRDELLNGELFYSLAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P549</accession>
    <name>A0A2M9P549_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Arc domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27535</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003769">
        <property type="protein sequence ID" value="PJN92684.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.1220.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005569">
        <property type="entry name" value="Arc_DNA-bd_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013321">
        <property type="entry name" value="Arc_rbn_hlx_hlx"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010985">
        <property type="entry name" value="Ribbon_hlx_hlx"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03869">
        <property type="entry name" value="Arc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF47598">
        <property type="entry name" value="SSF47598"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Arc" evidence="2">
        <location>
            <begin position="9"/>
            <end position="42"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="54"/>
            <end position="84"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="69"/>
            <end position="84"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03869"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92684.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="84" mass="9409" checksum="FD59AAAC5E55491D" modified="2018-04-25" version="1">MQQNRKLSDAYMLRLPDGWRDAIKARAAGNRRSMNQEILIALEGLIGGAAGEDFGEDAPLPVPMEIPPTEALKHEERNQRNPDR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-06-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P555</accession>
    <name>A0A2M9P555_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">GreA_GreB domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_27830</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003858">
        <property type="protein sequence ID" value="PJN92650.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032784">
        <property type="term" value="P:regulation of DNA-templated transcription, elongation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.50.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036953">
        <property type="entry name" value="GreA/GreB_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001437">
        <property type="entry name" value="Tscrpt_elong_fac_GreA/B_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01272">
        <property type="entry name" value="GreA_GreB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="GreA_GreB" evidence="2">
        <location>
            <begin position="1"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="65"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="77"/>
            <end position="92"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="92"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01272"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN92650.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="92" mass="10155" checksum="EA08497E749AD5D4" modified="2018-04-25" version="1" fragment="single">DADIRIRRVSVLTPVGTALIGRAEGAVIDCEFPAGTLRRLAILRISKNGPKPESAGIFRRESVRRMGDATSEANRPPHVASERRDLERMSFI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5G6</accession>
    <name>A0A2M9P5G6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Cell division topological specificity factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_26650</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="3">Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1">Belongs to the MinE family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003489">
        <property type="protein sequence ID" value="PJN92782.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051301">
        <property type="term" value="P:cell division"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032955">
        <property type="term" value="P:regulation of division septum assembly"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.1070.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005527">
        <property type="entry name" value="MinE"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036707">
        <property type="entry name" value="MinE_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03776">
        <property type="entry name" value="MinE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55229">
        <property type="entry name" value="SSF55229"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-0131">Cell cycle</keyword>
    <keyword evidence="4" id="KW-0132">Cell division</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="4">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008168"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00020112"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00025265"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92782.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="5535" checksum="025E7F487E10150C" modified="2018-04-25" version="1" fragment="single">MLAPERTDRSSPEYLPQLQRDILEVIERYMNVGGDSVDIKLERGDELS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5J8</accession>
    <name>A0A2M9P5J8_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_26565</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003466">
        <property type="protein sequence ID" value="PJN92788.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016773">
        <property type="term" value="F:phosphotransferase activity, alcohol group as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006468">
        <property type="term" value="P:protein phosphorylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0019748">
        <property type="term" value="P:secondary metabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011009">
        <property type="entry name" value="Kinase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006748">
        <property type="entry name" value="NH2Glyco/OHUrea_AB-resist_kin"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04655">
        <property type="entry name" value="APH_6_hur"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56112">
        <property type="entry name" value="SSF56112"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="104"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92788.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="104" mass="11766" checksum="CBE1CC5253A80D3C" modified="2018-04-25" version="1" fragment="single">FDRCRREGRESGRRRFGTMGGRGAVQVWHHDEGALLLEYIPGSDLTELVRSGRDDEATGIIADVLRKLHFDFQGEPPEGVTLLPRRFQCLFHKADEDNQADPSS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5M6</accession>
    <name>A0A2M9P5M6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25940</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003268">
        <property type="protein sequence ID" value="PJN92851.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="46"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92851.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="46" mass="4883" checksum="867A83FE733E3F51" modified="2018-04-25" version="1" fragment="single">MDTEATITRHELLTLTSEIVSAYASNATVEGTVVQDLIGSVFAKLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5Q1</accession>
    <name>A0A2M9P5Q1_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">FAD assembly factor SdhE</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_25700</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SdhE FAD assembly factor family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003189">
        <property type="protein sequence ID" value="PJN92881.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.150.250">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005631">
        <property type="entry name" value="SDH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036714">
        <property type="entry name" value="SDH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03937">
        <property type="entry name" value="Sdh5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF109910">
        <property type="entry name" value="SSF109910"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="3" id="KW-0143">Chaperone</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008571"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00019418"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023186"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN92881.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="6582" checksum="673EBC504E79ACD0" modified="2018-04-25" version="1">MAVVPQTEVFERMLSENDTEVYDWFMERTSAPEEYLDLVFKIREFHGKQPIGFPQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5R3</accession>
    <name>A0A2M9P5R3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Heavy metal transporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25815</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003230">
        <property type="protein sequence ID" value="PJN92863.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92863.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3607" checksum="A921F6429D64A314" modified="2018-04-25" version="1" fragment="single">VLVGQTRAVAIAVKNVSGRKRWSKLGEWLAQKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P5W1</accession>
    <name>A0A2M9P5W1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_25125</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01003030">
        <property type="protein sequence ID" value="PJN92944.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN92944.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13231" checksum="9D3F9FA0C23B3208" modified="2018-04-25" version="1" fragment="single">TEKISASSREDALPGLYNGEIRRFCCGFVADFTNGARDSQDVPRGKGSFFQVRFTLGERRIFDRSRWSVVADHPRLGATKGAIICSRRSKRSNISRRAVGSSGLLFVIHEDPRLEDAGL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P656</accession>
    <name>A0A2M9P656_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_24570</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002862">
        <property type="protein sequence ID" value="PJN93013.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="1"/>
            <end position="57"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93013.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8720" checksum="8614ED827C27AF5A" modified="2018-04-25" version="1" fragment="single">LEAINTGHPGSISTIHADSPVLALERLALMVMRVGNRQARRDVLEYAARTIDVIVQVGRRGGRRGVLEVHLPASNLLWVG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6F9</accession>
    <name>A0A2M9P6F9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Imidazole glycerol phosphate synthase subunit HisF</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_23160</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="pathway">
        <text evidence="4">Amino-acid biosynthesis.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 5">Belongs to the HisA/HisF family.</text>
    </comment>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002463">
        <property type="protein sequence ID" value="PJN93154.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00344"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0000105">
        <property type="term" value="P:histidine biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006062">
        <property type="entry name" value="His_biosynth"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011060">
        <property type="entry name" value="RibuloseP-bd_barrel"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00977">
        <property type="entry name" value="His_biosynth"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51366">
        <property type="entry name" value="SSF51366"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2 5" id="KW-0028">Amino-acid biosynthesis</keyword>
    <keyword evidence="3 5" id="KW-0368">Histidine biosynthesis</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="89"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009667"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022605"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023102"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00029440"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="RuleBase" id="RU003657"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN93154.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="89" mass="9466" checksum="0067EF3EFDF0A738" modified="2018-04-25" version="1" fragment="single">MTLKIRVIPCLDVKNGRVVKGVNFEGLRDAGDPVEAARAYDAAGADELCFLDIAASLENRGTLLDLASRTAEQCFMPLTVGGGVRTPED</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P6R6</accession>
    <name>A0A2M9P6R6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Cytochrome C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_22220</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>heme c</name>
            <dbReference type="ChEBI" id="CHEBI:61717"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002239">
        <property type="protein sequence ID" value="PJN93264.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0070469">
        <property type="term" value="C:respirasome"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005506">
        <property type="term" value="F:iron ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.760.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009056">
        <property type="entry name" value="Cyt_c-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036909">
        <property type="entry name" value="Cyt_c-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR008168">
        <property type="entry name" value="Cyt_C_IC"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13442">
        <property type="entry name" value="Cytochrome_CBB3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00605">
        <property type="entry name" value="CYTCHROMECIC"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46626">
        <property type="entry name" value="SSF46626"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51007">
        <property type="entry name" value="CYTC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0249">Electron transport</keyword>
    <keyword evidence="2 7" id="KW-0349">Heme</keyword>
    <keyword evidence="6 7" id="KW-0408">Iron</keyword>
    <keyword evidence="4 7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="5" id="KW-0677">Repeat</keyword>
    <keyword evidence="3" id="KW-0679">Respiratory chain</keyword>
    <keyword evidence="3" id="KW-0813">Transport</keyword>
    <feature type="domain" description="Cytochrome c" evidence="8">
        <location>
            <begin position="18"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="135"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022617"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022660"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022737"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="PROSITE-ProRule" id="PRU00433"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51007"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN93264.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="135" mass="14766" checksum="CF78F7B1DC424FBB" modified="2018-04-25" version="1" fragment="single">MIALMPLPAAAFLHASKTDTGSGRELYVEHCAACHGVDLEGQPDWRSSDASGLYPAPPHDETGHTWHHDDAMLIDYITRGGQAVLDDMDVTFTSGMPGFGSMLEQSEIEAILDYIKSTWPEHIREQQAQRSNAAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P768</accession>
    <name>A0A2M9P768_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21335</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01002025">
        <property type="protein sequence ID" value="PJN93369.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93369.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="73" mass="7978" checksum="6959629B7B274C21" modified="2018-04-25" version="1" fragment="single">LVVAAAKGSPDVQVKALMEGFESRSPQQAFRKETWDSIRDVYIGKGAKNGYWRLLLTAQPTEAVAEPAEEATV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P777</accession>
    <name>A0A2M9P777_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_21170</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001984">
        <property type="protein sequence ID" value="PJN93387.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93387.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="11179" checksum="995A9A09DEFE97EC" modified="2018-04-25" version="1" fragment="single">MQSRFRCAELRDGGLLVLPLLAVNDLGREPTLPVERTDLAGVIDRARDGDELMLRPGLAELLQPLKAGVDDVPIAQRRQRDPAAEPLLFLELHHLIKRVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7A7</accession>
    <name>A0A2M9P7A7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">IS110 family transposase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_20960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001939">
        <property type="protein sequence ID" value="PJN93417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="33"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="33" mass="3755" checksum="90A2B88A7C735C29" modified="2018-04-25" version="1" fragment="single">MRLIAETLMKARGSILDQIKVLDRRLMAVARAN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P7U5</accession>
    <name>A0A2M9P7U5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nitrate reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_19490</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001630">
        <property type="protein sequence ID" value="PJN93624.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006656">
        <property type="entry name" value="Mopterin_OxRdtase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00384">
        <property type="entry name" value="Molybdopterin"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molybdopterin" evidence="2">
        <location>
            <begin position="17"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="190"/>
            <end position="212"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="212"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00384"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93624.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="212" mass="22549" checksum="6928172B1035AD62" modified="2018-04-25" version="1" fragment="single">GDPETTGLDPADLAAFFDLWIGTEKVVTVFSQGVNQSASGADKVNAIINCHLATGRIGRPGMGPFSVTGQPNAMGGREVGGLANMLAAHLDLEDPAHRYLVRHFWDAPRLAEKPGLKAVDLFRACADGAIEVLWILGTNPVVSMPEADEVAEALARVPLVIVSDMFSTTDTARRGHVLLPALGWGEKSGTVTNSERRVSRQRAFLPAPGEAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P872</accession>
    <name>A0A2M9P872_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_18695</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001495">
        <property type="protein sequence ID" value="PJN93742.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="2" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="2">
        <location>
            <begin position="14"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="64"/>
            <end position="85"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN93742.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="85" mass="9637" checksum="DDC10314DE15660E" modified="2018-04-25" version="1">MIGGLLTGIATRPWMWAALRYGAIALAVLLFLLSLRRSGERAGRLAERLETTEKANDVQRQMLEAAARRPRDRDELAERLRDGQF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8C4</accession>
    <name>A0A2M9P8C4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">YicC_N domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_07560</name>
        <name evidence="2" type="ORF">CNY89_18345</name>
    </gene>
    <organism evidence="2 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001445">
        <property type="protein sequence ID" value="PJN93797.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="EMBL" id="PHNO01000384">
        <property type="protein sequence ID" value="PJN95593.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013527">
        <property type="entry name" value="YicC-like_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03755">
        <property type="entry name" value="YicC_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="YicC_N" evidence="1">
        <location>
            <begin position="4"/>
            <end position="44"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="55"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF03755"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93797.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95593.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="55" mass="5871" checksum="ECF2968BEC171102" modified="2018-04-25" version="1" fragment="single">MSLNSMTGFADLAGGAEGLTWVWEARSVNGRGLDLRLRLPEGFEAGPGPARGLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8N2</accession>
    <name>A0A2M9P8N2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">3-dehydroquinate dehydratase</fullName>
            <ecNumber evidence="5">4.2.1.10</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_17770</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>3-dehydroquinate = 3-dehydroshikimate + H2O</text>
            <dbReference type="Rhea" id="RHEA:21096"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16630"/>
            <dbReference type="ChEBI" id="CHEBI:32364"/>
            <dbReference type="EC" id="4.2.1.10"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2">Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.</text>
    </comment>
    <comment type="subunit">
        <text evidence="4">Homododecamer.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type-II 3-dehydroquinase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="4.2.1.10" evidence="5"/>
    <dbReference type="EMBL" id="PHNO01001369">
        <property type="protein sequence ID" value="PJN93891.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00053">
        <property type="reaction ID" value="UER00086"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003855">
        <property type="term" value="F:3-dehydroquinate dehydratase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009423">
        <property type="term" value="P:chorismate biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniPathway"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.9100">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00169">
        <property type="entry name" value="AroQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001874">
        <property type="entry name" value="DHquinase_II"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036441">
        <property type="entry name" value="DHquinase_II_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21272">
        <property type="entry name" value="PTHR21272"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01220">
        <property type="entry name" value="DHquinase_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52304">
        <property type="entry name" value="SSF52304"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0456">Lyase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001864"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004902"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011037"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00011193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00012060"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023239"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN93891.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="79" mass="8440" checksum="C012489BE57403EC" modified="2018-04-25" version="1" fragment="single">TSAGIVINPGAFTHTSVAILDALNTFEGVVIEVHISNVHKRESFRHHSYVSLRADGIIVGCGAQGYQLALRRVAALAEI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8W3</accession>
    <name>A0A2M9P8W3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">16S rRNA (Cytosine(1402)-N(4))-methyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="primary">mraW</name>
        <name evidence="1" type="ORF">CNY89_17250</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001299">
        <property type="protein sequence ID" value="PJN93971.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008168">
        <property type="term" value="F:methyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0032259">
        <property type="term" value="P:methylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.150">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002903">
        <property type="entry name" value="RsmH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029063">
        <property type="entry name" value="SAM-dependent_MTases_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01795">
        <property type="entry name" value="Methyltransf_5"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53335">
        <property type="entry name" value="SSF53335"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0489">Methyltransferase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="48"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN93971.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="48" mass="4825" checksum="A009031CED082C1E" modified="2018-04-25" version="1" fragment="single">MMAALHVPVLLDAILDAVSPVSGVWVDGTFGAGGYSRGLLEAGAARVI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z7</accession>
    <name>A0A2M9P8Z7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17140</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001285">
        <property type="protein sequence ID" value="PJN93992.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="77"/>
            <end position="97"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN93992.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="97" mass="10660" checksum="EADB101951AB7B8C" modified="2018-04-25" version="1">MTNKPFAEFRDGLLKVTVWKNDRKDGGRSFFSFDLRRSYKDEAGNWHETGGLTGDDALKGGSLLQLAYNHTITAGKAVSGNAHNADPEADQNGEIPY</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P8Z9</accession>
    <name>A0A2M9P8Z9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_17080</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001277">
        <property type="protein sequence ID" value="PJN94001.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="1">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5015000140" evidence="1">
        <location>
            <begin position="20"/>
            <end position="61"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94001.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="61" mass="6407" checksum="BDB795F438BA4CE9" modified="2018-04-25" version="1" fragment="single">MTCCFFQSSVWLMAGSTLAANRMVSENGQGASGAIHGRFRQAATQHLAEGPGIREPVAVSL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P965</accession>
    <name>A0A2M9P965_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Glycosyl transferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16615</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001216">
        <property type="protein sequence ID" value="PJN94084.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="247"/>
            <end position="280"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="292"/>
            <end position="310"/>
        </location>
    </feature>
    <feature type="domain" description="Glyco_trans_2-like" evidence="2">
        <location>
            <begin position="4"/>
            <end position="126"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="333"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94084.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="333" mass="36181" checksum="52F1AF3282D53251" modified="2018-04-25" version="1" fragment="single">MKVSVGIKALNEERHIEAAIVSALAAIEGLDGEVILADSGSSDRTIEIARAFPIRIVQFANSAERCCGAGAQLAYQHARGAYFYILDGDMVLDPGFLKAGIAYLEAHPDLAAVGGIVREMNTQAAEFEIRARAVARDGAWKPGPVDRLDCGGLYRTQAIREVGWFADRNLHAFEEFELGARLHAKGWRLARIDHKSVDHYGHRADGYALLLRRFGSGYAGAPGEVVRGALGRPHFGHVMRHLSHVRIALLVSVWWIALLTAVATGAWLSLLGLIVAPFLFLSWRRGSLRLGLFSLASWNVGALAFYSGLLRARVSPETPRDAARPDRAPAAAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9B0</accession>
    <name>A0A2M9P9B0_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Type VI secretion protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_16470</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the GSP E family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001195">
        <property type="protein sequence ID" value="PJN94110.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001482">
        <property type="entry name" value="T2SS/T4SS"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00437">
        <property type="entry name" value="T2SSE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="T2SP_E" evidence="2">
        <location>
            <begin position="27"/>
            <end position="291"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="330"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00006611"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94110.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="330" mass="35811" checksum="0CEF8AEE0CDA5AB0" modified="2018-04-25" version="1" fragment="single">MGEAPALLASNSHAEHDLRDLRALLVSEDVNEVVINPDGAVWVERADAEHMIRTEHRFPPGKVLQLGRHLAGETMNRLGDRRPIVSGGLQAFGQALRVQIVAPPAVEAGASLSIRKYVSRILDVAEIGFLHGRQVSVEGERRAKLADLAKLAEAGRLQELFEQAIAQRMNILVSGGTSSGKTTVARALLSLADRAERLVTIEDARELHLPHLNSVALIAERDAASERTPMRLLMAALRMRPDRLILGEMRGEEALAFLEAINTGHPGSISTIHADSPVLALERLALMVLRAGTRQSRGDVLDYAGRTIDLIVQVGRKGGRRGVLEVFVPA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9R5</accession>
    <name>A0A2M9P9R5_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">PlsC domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15495</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001080">
        <property type="protein sequence ID" value="PJN94270.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016746">
        <property type="term" value="F:acyltransferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002123">
        <property type="entry name" value="Plipid/glycerol_acylTrfase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01553">
        <property type="entry name" value="Acyltransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="PlsC" evidence="1">
        <location>
            <begin position="34"/>
            <end position="99"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01553"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94270.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="119" mass="13495" checksum="94BE06F7C13A8A24" modified="2018-04-25" version="1">MAPFALWSMDGAYRGIKIYCRIVLWVLEKLCGLRCETRGTIPTGAVIVASKHQSFLDILILARDLPRPKFIMKKELRWAPVLGLYAWRMGSTPVDRGAAAGGEEAWWPMWASRATWASW</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9W0</accession>
    <name>A0A2M9P9W0_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">Flavin_Reduct domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15175</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001045">
        <property type="protein sequence ID" value="PJN94328.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016646">
        <property type="term" value="F:oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.30.110.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002563">
        <property type="entry name" value="Flavin_Rdtase-like_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR012349">
        <property type="entry name" value="Split_barrel_FMN-bd"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01613">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00903">
        <property type="entry name" value="Flavin_Reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Flavin_Reduct" evidence="1">
        <location>
            <begin position="21"/>
            <end position="157"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="180"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00903"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94328.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="180" mass="19739" checksum="E29A813FB7441CD0" modified="2018-04-25" version="1" fragment="single">MTTEFDFRALTAQQRYKLMIGAIVPRPIALVTTVDAAGRVNAAPFSFFNCLSADPPILALGVENHPDMRFKDTAVNIRDTEVFTVNIVSRAIAEAMHVTAVKFPPEVDELAEAGLTARPGVAVASPWIAEASAAFECRRHVTLSLGRSREIWSRFCTLNELVKGVGDLRGAEWFGQVHKK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z1</accession>
    <name>A0A2M9P9Z1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">RNA polymerase subunit sigma</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_15030</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001032">
        <property type="protein sequence ID" value="PJN94350.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045942">
        <property type="entry name" value="DUF6362"/>
    </dbReference>
    <dbReference type="Pfam" id="PF19889">
        <property type="entry name" value="DUF6362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="DUF6362" evidence="1">
        <location>
            <begin position="23"/>
            <end position="119"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF19889"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN94350.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="126" mass="14768" checksum="F288BE7273F015FC" modified="2018-04-25" version="1">MADREWTADCVADHFEEAFRTLRKLPPVKAQGYFNTWPDIVRTSREIAAMEPQPMRVWPSAAAITRLEQTFDWVLWIEQAERKLVWSRAARVPWKQISGELGCDRTTAWRRWQLALTKIAARLNAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z6</accession>
    <name>A0A2M9P9Z6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_14925</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001022">
        <property type="protein sequence ID" value="PJN94368.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013320">
        <property type="entry name" value="ConA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009784">
        <property type="entry name" value="DUF1349"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR35332">
        <property type="entry name" value="PTHR35332"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07081">
        <property type="entry name" value="DUF1349"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF49899">
        <property type="entry name" value="SSF49899"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94368.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="16216" checksum="045A1BAC02D60629" modified="2018-04-25" version="1">MALAEVEDEPLQREDLRGPFLGGLHRDRLAELIRLDATRWVKTGVEFSDGEAFLSTVVTDGKSDWSVAKPFAGMEDFWIRATVDKGALRVQASADGTVWPLARLAPFPVAPAYEVGPTACTPERAGLTVRFSEFTLEPATTKDLHDLS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9P9Z9</accession>
    <name>A0A2M9P9Z9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_15015</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001031">
        <property type="protein sequence ID" value="PJN94352.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006865">
        <property type="term" value="P:amino acid transport"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001123">
        <property type="entry name" value="LeuE-type"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30086">
        <property type="entry name" value="PTHR30086"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01810">
        <property type="entry name" value="LysE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="44"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="73"/>
            <end position="91"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="101"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94352.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="101" mass="10443" checksum="12C5CF86C0224314" modified="2018-04-25" version="1" fragment="single">MTHDLLLALFAFAFVTTVTPGPNNLMLLASGVNFGLRRSLPHVAGVTLGVVFMVLLLGAGLAEGVARLPQAGLALKVLSLGYMLWLAWKIATAAAPEAGEG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PA14</accession>
    <name>A0A2M9PA14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyl-CoA synthetase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14900</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01001019">
        <property type="protein sequence ID" value="PJN94374.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.300.30">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.12780">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR025110">
        <property type="entry name" value="AMP-bd_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045851">
        <property type="entry name" value="AMP-bd_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000873">
        <property type="entry name" value="AMP-dep_Synth/Lig"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR042099">
        <property type="entry name" value="ANL_N_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00501">
        <property type="entry name" value="AMP-binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13193">
        <property type="entry name" value="AMP-binding_C"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AMP-binding" evidence="1">
        <location>
            <begin position="9"/>
            <end position="273"/>
        </location>
    </feature>
    <feature type="domain" description="AMP-binding_C" evidence="2">
        <location>
            <begin position="283"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="404"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00501"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF13193"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94374.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="404" mass="43132" checksum="C675186ED8E67A6E" modified="2018-04-25" version="1" fragment="single">ERGDALDFAEADPDRTCACFHTGGTTGLPKIARHRARGILYNGWCGAAYMFTETDVLLCPLPMFHVLAAYPILMSCLMSGAAMVLPTPQGYRGEGVMDNFWKLVARHRATFLITVPTAAAALMQRPVDADVSTLRLAISGSAPMPVELFERFESATGLKILEGYGMTEATCLISINPPYGPRKIGSVGIPFAYTEVRICKCAPSGEVVSRCGPEEVGEICVLNPGVTPELYADPARNVGMMTSEGFLRTGDLGRLDAEGYLWITGRAKDLIIRGGHNIDPAMIEEAAMTHPAVAFAGAVGQPDAHAGETPALYVELVAGAEVGSRDLLAHVSEHIAERAAVPRHLEILGELPKTAVGKIFKPDLRRRAIVRVYDNGAGTGGAGARVVEVVEDRRLRLVAELGPG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAE4</accession>
    <name>A0A2M9PAE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Nucleoside triphosphate pyrophosphohydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_14185</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000944">
        <property type="protein sequence ID" value="PJN94492.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004518">
        <property type="entry name" value="MazG_cat"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011551">
        <property type="entry name" value="NTP_PyrPHydrolase_MazG"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30522">
        <property type="entry name" value="PTHR30522"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03819">
        <property type="entry name" value="MazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00444">
        <property type="entry name" value="mazG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="MazG" evidence="2">
        <location>
            <begin position="47"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="119"/>
            <end position="145"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="145"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF03819"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94492.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="145" mass="16303" checksum="CF5A101E012D0B5A" modified="2018-04-25" version="1" fragment="single">MAPRPEPVVAPAASPLVSDPEGGLPRLVEIMARLRDPERGCPWDIEQDFASIAPYTIEEAYEVADAIARGDLPDLRDELGDLLFQVVYHARMAEEAEAFALPDVIRAISDKMVRRHPHVFGDEDRDKSAEQQTRDWERLKAAERA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAP3</accession>
    <name>A0A2M9PAP3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">LysR family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_13510</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the LysR transcriptional regulatory family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000878">
        <property type="protein sequence ID" value="PJN94608.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003700">
        <property type="term" value="F:DNA-binding transcription factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005119">
        <property type="entry name" value="LysR_subst-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000847">
        <property type="entry name" value="Tscrpt_reg_HTH_LysR"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00126">
        <property type="entry name" value="HTH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03466">
        <property type="entry name" value="LysR_substrate"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50931">
        <property type="entry name" value="HTH_LYSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="HTH lysR-type" evidence="2">
        <location>
            <begin position="1"/>
            <end position="58"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00009437"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="PROSITE" id="PS50931"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94608.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="286" mass="31530" checksum="745E0AE254400FC9" modified="2018-04-25" version="1">MELKWLEDFLSLAATRSFSRSAEARRVTQSAFSRRIRSLEVWLGSDLLDRSSYPITLTAEGRAFRETAEEVVRQLYLSRSAARHPEPQARGATPVIAFTALQHAGDHFLPQWLTGLRDRVGPMESRVLPDNFAICVQALVDGGYDFLLTFHHASVTAPLDAERFPHLVVGWDSLSAVARPEEAARWRAEGAAMPLLRYSRGSFLGLLANFAQSQPGAPEVYVAHTNENSMAEAMKFMALEGHGVVWLPRSLVAPEIAAGRLEVVAPELPMEIESVRSSVYGSAGPF</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAX1</accession>
    <name>A0A2M9PAX1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Gamma carbonic anhydrase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_13070</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000833">
        <property type="protein sequence ID" value="PJN94681.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001451">
        <property type="entry name" value="Hexapep"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011004">
        <property type="entry name" value="Trimer_LpxA-like_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00132">
        <property type="entry name" value="Hexapep"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51161">
        <property type="entry name" value="SSF51161"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94681.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="156" mass="15976" checksum="9E2087190CF4C89F" modified="2018-04-25" version="1" fragment="single">MSLYEIDGIAPILPQGGEFWIAPGAQVLGRVILHAGASVWFNAVLRGDNEPIELGEGSNIQDGCVCHTDPGHPLTIGARVTVGHMAILHGCSIGNGTLIGMGATVLNGARIGSGVLLGAGALVTEGKEIPDGVLAVGRPAKVVRDLTEEETAGLRR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PAZ6</accession>
    <name>A0A2M9PAZ6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="6">Sulfite reductase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="6" type="ORF">CNY89_12965</name>
    </gene>
    <organism evidence="6 7">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="6 7" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="6 7">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="6">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000824">
        <property type="protein sequence ID" value="PJN94695.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.413.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005117">
        <property type="entry name" value="NiRdtase/SiRdtase_haem-b_fer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036136">
        <property type="entry name" value="Nit/Sulf_reduc_fer-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006067">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045169">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_prot"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045854">
        <property type="entry name" value="NO2/SO3_Rdtase_4Fe4S_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR11493">
        <property type="entry name" value="PTHR11493"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01077">
        <property type="entry name" value="NIR_SIR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF03460">
        <property type="entry name" value="NIR_SIR_ferr"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55124">
        <property type="entry name" value="SSF55124"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56014">
        <property type="entry name" value="SSF56014"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="2" id="KW-0408">Iron</keyword>
    <keyword evidence="3" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="1" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="7" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="NIR_SIR_ferr" evidence="5">
        <location>
            <begin position="52"/>
            <end position="110"/>
        </location>
    </feature>
    <feature type="domain" description="NIR_SIR" evidence="4">
        <location>
            <begin position="119"/>
            <end position="268"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="6">
        <location>
            <position position="270"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF01077"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="5">
        <source>
            <dbReference type="Pfam" id="PF03460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="EMBL" id="PJN94695.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="270" mass="31165" checksum="C4F731C0F8EC7564" modified="2018-04-25" version="1" fragment="single">MYQYDDFDRDYVRARVGEFREQVERRISGSLTEDEFRPLRLMNGLYLQLHAYMLRVAVPYGTLDPAKMRQLAYLAERWDKGYGHFTTRQNIQFNWPKLRDVPDMLDALADVGMHAIQTSGNCIRNVTADHFAGAAADEIEDPRPTAELLRQWSTDHPEFTWLPRKFKIAITGAPNDRAVIRAHDIGLRMVRNDAGEPGYEVVVGGGLGRTPMIGKTLREFLPKADLLPYLEAILQVYNRFGRRDNKYKARIKILVHEETIEVMRERVEAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB46</accession>
    <name>A0A2M9PB46_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="7">Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ</fullName>
        </recommendedName>
        <alternativeName>
            <fullName evidence="7">Flavocytochrome MsrQ</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="7" type="primary">msrQ</name>
        <name evidence="9" type="ORF">CNY89_12645</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="7">Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>FMN</name>
            <dbReference type="ChEBI" id="CHEBI:58210"/>
        </cofactor>
        <text evidence="7">Binds 1 FMN per subunit.</text>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="7">
            <name>heme b</name>
            <dbReference type="ChEBI" id="CHEBI:60344"/>
        </cofactor>
        <text evidence="7">Binds 1 heme b (iron(II)-protoporphyrin IX) group per subunit.</text>
    </comment>
    <comment type="subunit">
        <text evidence="7">Heterodimer of a catalytic subunit (MsrP) and a heme-binding subunit (MsrQ).</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="7">Cell membrane</location>
            <topology evidence="7">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="7">Belongs to the MsrQ family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000794">
        <property type="protein sequence ID" value="PJN94745.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005887">
        <property type="term" value="C:integral component of plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009055">
        <property type="term" value="F:electron transfer activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0010181">
        <property type="term" value="F:FMN binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0020037">
        <property type="term" value="F:heme binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0030091">
        <property type="term" value="P:protein repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_01207">
        <property type="entry name" value="MsrQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013130">
        <property type="entry name" value="Fe3_Rdtase_TM_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR022837">
        <property type="entry name" value="MsrQ-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR36964">
        <property type="entry name" value="PTHR36964"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01794">
        <property type="entry name" value="Ferric_reduct"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7" id="KW-0249">Electron transport</keyword>
    <keyword evidence="7" id="KW-0285">Flavoprotein</keyword>
    <keyword evidence="7" id="KW-0288">FMN</keyword>
    <keyword evidence="7" id="KW-0349">Heme</keyword>
    <keyword evidence="5 7" id="KW-0408">Iron</keyword>
    <keyword evidence="6 7" id="KW-0472">Membrane</keyword>
    <keyword evidence="7" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 7" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 7" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2 7" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="17"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="55"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="85"/>
            <end position="102"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="122"/>
            <end position="138"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="159"/>
            <end position="176"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="7">
        <location>
            <begin position="182"/>
            <end position="197"/>
        </location>
    </feature>
    <feature type="domain" description="Ferric oxidoreductase" evidence="8">
        <location>
            <begin position="55"/>
            <end position="167"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_01207"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="Pfam" id="PF01794"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94745.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="209" mass="23380" checksum="5960EB62578551EF" modified="2018-04-25" version="1">MTAGQGAARLNGWLRRIPVGPLYAVLLLPAAWWIWRGVTGRLGADPVRALEQELGLFALQLLIAALCVTPLREITGVTLLRFRRCLGLSAFWYACLHLAAWLSLDRQFDWARVLEDLTKRPYVILGMTAFVLLIPLAATSSNAAIRRLGPIRWRALHRLAYPATLFAAIHFIWLVKAWPLEPLAYGAGVLALLAWRLRGRLARRRSVGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PB55</accession>
    <name>A0A2M9PB55_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_12560</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000787">
        <property type="protein sequence ID" value="PJN94759.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN94759.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="162" mass="18199" checksum="A9675A571421945A" modified="2018-04-25" version="1">MERNFAGGARTRRGESEPRALVARSSLRYPVEAAQQALASKHLARRGKLYGRDRASWEAQLQEHKPLFDLSEAYHQECDRLQEELGWTAAWQAVSNKKDQLSETVTALMAQKEQTVAGLLVKARAVQTFGRTEHAWCTFQAIRWSGELAEAVLRFAERGAGS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="19" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBB3</accession>
    <name>A0A2M9PBB3_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5">DNA gyrase subunit B</fullName>
            <ecNumber evidence="4">5.6.2.2</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_12205</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>ATP-dependent breakage, passage and rejoining of double-stranded DNA.</text>
            <dbReference type="EC" id="5.6.2.2"/>
        </reaction>
    </comment>
    <comment type="cofactor">
        <cofactor evidence="2">
            <name>Mg(2+)</name>
            <dbReference type="ChEBI" id="CHEBI:18420"/>
        </cofactor>
    </comment>
    <comment type="similarity">
        <text evidence="3">Belongs to the type II topoisomerase GyrB family.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.6.2.2" evidence="4"/>
    <dbReference type="EMBL" id="PHNO01000754">
        <property type="protein sequence ID" value="PJN94821.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003918">
        <property type="term" value="F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006265">
        <property type="term" value="P:DNA topological change"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd03366">
        <property type="entry name" value="TOPRIM_TopoIIA_GyrB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.230.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.565.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.670">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003594">
        <property type="entry name" value="HATPase_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036890">
        <property type="entry name" value="HATPase_C_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020568">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014721">
        <property type="entry name" value="Ribosomal_S5_D2-typ_fold_subgr"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001241">
        <property type="entry name" value="Topo_IIA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013760">
        <property type="entry name" value="Topo_IIA-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013759">
        <property type="entry name" value="Topo_IIA_B_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013506">
        <property type="entry name" value="Topo_IIA_bsu_dom2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018522">
        <property type="entry name" value="TopoIIA_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006171">
        <property type="entry name" value="TOPRIM_domain"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR034160">
        <property type="entry name" value="TOPRIM_GyrB"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00204">
        <property type="entry name" value="DNA_gyraseB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02518">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01751">
        <property type="entry name" value="Toprim"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00387">
        <property type="entry name" value="HATPase_c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00433">
        <property type="entry name" value="TOP2c"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54211">
        <property type="entry name" value="SSF54211"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55874">
        <property type="entry name" value="SSF55874"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56719">
        <property type="entry name" value="SSF56719"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00177">
        <property type="entry name" value="TOPOISOMERASE_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50880">
        <property type="entry name" value="TOPRIM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0799">Topoisomerase</keyword>
    <feature type="domain" description="Toprim" evidence="8">
        <location>
            <begin position="397"/>
            <end position="509"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="509"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000185"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001946"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00010708"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012895"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00019166"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023029"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023235"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50880"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN94821.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="509" mass="55969" checksum="28968B346CF41EF4" modified="2018-04-25" version="1" fragment="single">GMYIGDTDDGSGLHHMVYEVVDNGIDEALGGWADRVTVILHADNSVSVTDNGRGVPVGIHEGEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSDWLELRVWREGFEHFIRFEHGEAVAPLKVVGPAEGRRGTQVRFLASTQTFSNLDYSFKTLEHRLRELAFLNSGVRITLTDRRHAEPVEVELHYDGGVREFVRWLDRSKSALIKDPIHVVGERDGITVEAALWWNDSYHETMLPFTNNIPQRDGGTHLAGFRGALTRTINAYAGESGLAKKEKVALSGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESLLNEKLSDWFEENPADARTVVGKIVEAALAREAARKARELTRRKTAMDVANLPGKLADCQEKDPSKAELFLVEGDSAGGSAKQGRSRQNQAVLPLRGKILNVERARFDRMLSSNEIGTLITALGTGIGRDEFNLGKLRYHKVVIMTDADVDGAHIRTLLLTFFFRQMPKLIESGHLYIA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PBI2</accession>
    <name>A0A2M9PBI2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Penicillin-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_11745</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000709">
        <property type="protein sequence ID" value="PJN94889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3810.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001264">
        <property type="entry name" value="Glyco_trans_51"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023346">
        <property type="entry name" value="Lysozyme-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036950">
        <property type="entry name" value="PBP_transglycosylase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00912">
        <property type="entry name" value="Transgly"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53955">
        <property type="entry name" value="SSF53955"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="domain" description="Transgly" evidence="2">
        <location>
            <begin position="60"/>
            <end position="233"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="241"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF00912"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN94889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="241" mass="27212" checksum="8643413D8C098771" modified="2018-04-25" version="1" fragment="single">MSRFLLRFFGFVFSWLAIGSIMGLGVLAGVFYIYGRDLPDHAQLARYEPPTLSRIYSGEGELMDEFARERRIFTPIDEIPDRIKQAFISAEDKNFYHHAGFDPMGIAAAIYQASQGDRLRGASTITQQVMKNFLLTGDRSGERKIKEIILATRLENTLTKDKILELYLNEIFLGQNSYGVTAAAQVYFAKSLDELTLAEIAYLAALPKEPSNLHPVRQKDKAIGRRNYVIGQMADNGYVTR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PC32</accession>
    <name>A0A2M9PC32_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_10555</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000611">
        <property type="protein sequence ID" value="PJN95089.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="91"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95089.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="91" mass="9782" checksum="38D0AF76718FA8FC" modified="2018-04-25" version="1" fragment="single">MTEIHFHSPSLGTYWVAIEAPSAEVRSAYPPDTIETSPRPSLDHQLQDDVWVHVLPPPPDLTAARARMTLTPPAASSIGLAAEGWITAGRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCA5</accession>
    <name>A0A2M9PCA5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Acyltransferase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_10195</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000582">
        <property type="protein sequence ID" value="PJN95148.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016747">
        <property type="term" value="F:acyltransferase activity, transferring groups other than amino-acyl groups"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002656">
        <property type="entry name" value="Acyl_transf_3_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01757">
        <property type="entry name" value="Acyl_transf_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0012">Acyltransferase</keyword>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0808">Transferase</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="17"/>
            <end position="35"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="55"/>
            <end position="72"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="93"/>
            <end position="113"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="155"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="182"/>
            <end position="201"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="238"/>
            <end position="267"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="287"/>
            <end position="305"/>
        </location>
    </feature>
    <feature type="domain" description="Acyl_transf_3" evidence="2">
        <location>
            <begin position="13"/>
            <end position="300"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="3">
        <location>
            <position position="306"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF01757"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95148.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="306" mass="33668" checksum="5CFEF0DD980E6271" modified="2018-04-25" version="1" fragment="single">MVRLGELARGRDNNLNLIRMVAATAVLVSHAWPLTLGPSAIEPLNDSVGHSLGRISVYIFFVISGFLITASFERSETLFRFVAARVMRLMPGLIVSLVFVALVLGLAVTRLPATEYLTSPDTWTFLLSNTLLVSPQYTLPGVFVNNPVPTVEGSIWTLFYEAACYGLVFLLGIGAMLRPRRLGIFVCVYAVVCTAVLATGVEMPYKLYRLLLLSLPFVVGMGAWAWRDRLPLSGAAAIGLWVVAILLDDTFLAYISFILAVAYATFWLAYVPGGWIRNYNRLGDYSYGMYIYAIPLQGLVVMLFGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCE4</accession>
    <name>A0A2M9PCE4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_09835</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000555">
        <property type="protein sequence ID" value="PJN95209.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95209.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="13424" checksum="3D6A4F198077AEC3" modified="2018-04-25" version="1">MGRPRLPPEALRDTRVQLRLTAEERAELERRADAFGLSLSDYLRRRALGSAMPATAAEERARAALATALLRIGVNLNQAMRRYNASGRPPPHLPQLIEDVRAHVDWLVSDEPRRDRHR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-02-10" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCG7</accession>
    <name>A0A2M9PCG7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Dicarboxylate/amino acid:cation symporter</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_09885</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000559">
        <property type="protein sequence ID" value="PJN95202.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015293">
        <property type="term" value="F:symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3860.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001991">
        <property type="entry name" value="Na-dicarboxylate_symporter"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036458">
        <property type="entry name" value="Na:dicarbo_symporter_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR42865">
        <property type="entry name" value="PTHR42865"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00375">
        <property type="entry name" value="SDF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF118215">
        <property type="entry name" value="SSF118215"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="2" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="12"/>
            <end position="34"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="54"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="90"/>
            <end position="112"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="158"/>
            <end position="175"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="7">
        <location>
            <position position="191"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95202.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="191" mass="20128" checksum="15EDCE2122D52CB2" modified="2018-04-25" version="1" fragment="single">MQHAHPPKKSRLTTWIGVGLILGVAVGYWCNQIAADAEGAKSLAANFTIITDIFLRLIKMIIAPLVFATIVSGIASAGDAKTVGGIAIKAMSWFILASLVSLTIGLVMANLLHPGAGLNLPIPTATDTGLKTEAMNFRTFITHVFPTSVVDAMSKNEILQILIFSVFFGFAVGALPRDLSAPLLKVVDAVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCN2</accession>
    <name>A0A2M9PCN2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Formate dehydrogenase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_09420</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000519">
        <property type="protein sequence ID" value="PJN95278.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043546">
        <property type="term" value="F:molybdopterin cofactor binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016491">
        <property type="term" value="F:oxidoreductase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009010">
        <property type="entry name" value="Asp_de-COase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006657">
        <property type="entry name" value="MoPterin_dinucl-bd_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01568">
        <property type="entry name" value="Molydop_binding"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF50692">
        <property type="entry name" value="SSF50692"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Molydop_binding" evidence="1">
        <location>
            <begin position="361"/>
            <end position="477"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF01568"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95278.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="493" mass="54810" checksum="2E820878007A785B" modified="2018-04-25" version="1" fragment="single">YDILRMFELMNEGRVNLYFCQGFNPLLSFPNRAKVTEGLKKLKLLVTMDPLETETARFWENHGDFNDVDPGAIQTEVIQLPTSCFAEEEGSLTNSGRWIQWHWQGGTPPGEAKHDTWIMAQIFLRLRDLYRAEGGAFPDPIVNLTWDYADENEPHPEELAKEINGRALAPVLDAADPTKVLAEPGKLLLNFSQLRDDGSTSSACWIYSGCWNENGNNMARRDNSDPDATGAYLGWTFAWPLNRRILYNRASADMAGNPWDPSRRLISWDGAKWSGYDVPDIAPTAAPGTVMPFIMNPEGVSRLFSRGMMRDGPFPTHMEPFETPVANVLNPRMVGNPVARVFASDVATFAPAGDPDFPYAATSYRLTEHFHYWTKHNRVNAVLQPEFFVEISVELAAEKGVQGGDWVRVWSKRGSVKAKAVVTKRLKPLTCDGKTVHVVGVPLHWGFVGAARKGFGPNSLTPFVGDANVETPEFKAFLVNLEKSTPPQGGPVA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCP6</accession>
    <name>A0A2M9PCP6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AraC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_09150</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000501">
        <property type="protein sequence ID" value="PJN95326.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032687">
        <property type="entry name" value="AraC-type_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12625">
        <property type="entry name" value="Arabinose_bd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Arabinose_bd" evidence="4">
        <location>
            <begin position="26"/>
            <end position="73"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="5">
        <location>
            <position position="74"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF12625"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95326.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="74" mass="7722" checksum="301F42E69BD868BF" modified="2018-04-25" version="1" fragment="single">METGGPAIQRAAGLVELPALLGDVPLAQVLAGTGVTPADLRPDAFIPYAAFLDILERAARLTGREDLGLRLGLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCT9</accession>
    <name>A0A2M9PCT9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3 6">Nuclease SbcCD subunit D</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="6" type="primary">sbcD</name>
        <name evidence="8" type="ORF">CNY89_08950</name>
    </gene>
    <organism evidence="8 9">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="8 9" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="8 9">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="6">SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'-&gt;5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity.</text>
    </comment>
    <comment type="subunit">
        <text evidence="2 6">Heterodimer of SbcC and SbcD.</text>
    </comment>
    <comment type="similarity">
        <text evidence="1 6">Belongs to the SbcD family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000485">
        <property type="protein sequence ID" value="PJN95361.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008408">
        <property type="term" value="F:3'-5' exonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004519">
        <property type="term" value="F:endonuclease activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006310">
        <property type="term" value="P:DNA recombination"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006260">
        <property type="term" value="P:DNA replication"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="CDD" id="cd00840">
        <property type="entry name" value="MPP_Mre11_N"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.60.21.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004843">
        <property type="entry name" value="Calcineurin-like_PHP_ApaH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029052">
        <property type="entry name" value="Metallo-depent_PP-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR041796">
        <property type="entry name" value="Mre11_N"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004593">
        <property type="entry name" value="SbcD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00149">
        <property type="entry name" value="Metallophos"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF56300">
        <property type="entry name" value="SSF56300"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00619">
        <property type="entry name" value="sbcd"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6" id="KW-0233">DNA recombination</keyword>
    <keyword evidence="6" id="KW-0235">DNA replication</keyword>
    <keyword evidence="6" id="KW-0255">Endonuclease</keyword>
    <keyword evidence="5 6" id="KW-0269">Exonuclease</keyword>
    <keyword evidence="6" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4 6" id="KW-0540">Nuclease</keyword>
    <keyword evidence="9" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Metallophos" evidence="7">
        <location>
            <begin position="3"/>
            <end position="97"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="8">
        <location>
            <position position="118"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00011322"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00013365"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022722"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022839"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="RuleBase" id="RU363069"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="Pfam" id="PF00149"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="EMBL" id="PJN95361.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="118" mass="12876" checksum="BF0B9B1D4E8F83D9" modified="2018-04-25" version="1" fragment="single">MLSILHTADLHLGKRFGAFPEPFRGRLQEARHQALESLARLARAESVDAVLIAGDLFDTETPSPEVLRQALRVLADSAPLQWVVIPGNHDPASAAALWEHVQAHKPPNLTLALTPEPI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW2</accession>
    <name>A0A2M9PCW2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Enoyl-CoA hydratase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_08835</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the enoyl-CoA hydratase/isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000476">
        <property type="protein sequence ID" value="PJN95379.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003824">
        <property type="term" value="F:catalytic activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.12.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029045">
        <property type="entry name" value="ClpP/crotonase-like_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018376">
        <property type="entry name" value="Enoyl-CoA_hyd/isom_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001753">
        <property type="entry name" value="Enoyl-CoA_hydra/iso"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014748">
        <property type="entry name" value="Enoyl-CoA_hydra_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00378">
        <property type="entry name" value="ECH_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52096">
        <property type="entry name" value="SSF52096"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00166">
        <property type="entry name" value="ENOYL_COA_HYDRATASE"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00005254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU003707"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN95379.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="258" mass="27654" checksum="C971A5C60C73AA92" modified="2018-04-25" version="1">MAYETLIVETVEHVATIRLNRPEALNALNGQMMQELAAALSDLDRDPDVRAIVLTGSEKAFAAGADIKEMATKGFVEMYLEDMFEGPAATIARCRKPVIAAVSGYCLGGGCELAMICDFILAADTAKFGQPEINLGVIPGIGGSQRLTRAVGKSKAMEMCLTGRFMDAAEAERSGLASRVVPAKELLAEARATALKIAEKSPIAVRAAKEAVNRAFETTLAEGLLFEQRLFGALFATEDQKEGMQAFAEKRTAQFRGK</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PCW9</accession>
    <name>A0A2M9PCW9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">Sodium:alanine symporter family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_08935</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="8">Cell inner membrane</location>
            <topology evidence="8">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 8">Belongs to the alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family.</text>
    </comment>
    <comment type="caution">
        <text evidence="8">Lacks conserved residue(s) required for the propagation of feature annotation.</text>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000484">
        <property type="protein sequence ID" value="PJN95362.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015655">
        <property type="term" value="F:alanine:sodium symporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001463">
        <property type="entry name" value="Na/Ala_symport"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30330">
        <property type="entry name" value="PTHR30330"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01235">
        <property type="entry name" value="Na_Ala_symp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00175">
        <property type="entry name" value="NAALASMPORT"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00835">
        <property type="entry name" value="agcS"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00873">
        <property type="entry name" value="NA_ALANINE_SYMP"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8" id="KW-0997">Cell inner membrane</keyword>
    <keyword evidence="4" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="7 8" id="KW-0472">Membrane</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="8" id="KW-0769">Symport</keyword>
    <keyword evidence="5 8" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="6 8" id="KW-1133">Transmembrane helix</keyword>
    <keyword evidence="3 8" id="KW-0813">Transport</keyword>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="12"/>
            <end position="30"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="137"/>
            <end position="158"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="170"/>
            <end position="194"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="206"/>
            <end position="224"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="8">
        <location>
            <begin position="296"/>
            <end position="319"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="343"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00009261"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022448"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="RuleBase" id="RU363064"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95362.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="343" mass="35771" checksum="E3C6645D587B3CC3" modified="2018-04-25" version="1" fragment="single">MTAIIGFLNTIFWGYVLIYGLIAVGIYFTIRLRFQQVLHFPEMFRVIFMSDSTDKEGITPFQALCTSLASRVGTGNIAGVAVALTLGGPGAIFWMWVVAFVGMATAYSESTLAQLYKTHGPEGVYRGGPAFYIARGLGLPWLGSIFSVCLILSFGLVFNAVQANSIADAMVVAFGVPKLVTGLALAALTAVVIFGGIRKIATVAEYVVPFMAGVYLLVALFVLFTNLSEVPAMLGHIVGQAFGLEEAVGGVAGGVAAAMLNGVKRGLFSNEAGMGSAPNIAAAATPMPHHPSSQGFVQALGVFIDTIVVCTCTALMILLSGVYVPGGEVTGTALTQLAMGEHI</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="14" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PD00</accession>
    <name>A0A2M9PD00_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="11">Excinuclease ABC subunit C</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="11" type="primary">uvrC</name>
        <name evidence="11" type="ORF">CNY89_08605</name>
    </gene>
    <organism evidence="11 12">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="11 12" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="11 12">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="11">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000459">
        <property type="protein sequence ID" value="PJN95417.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009380">
        <property type="term" value="C:excinuclease repair complex"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009381">
        <property type="term" value="F:excinuclease ABC activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006289">
        <property type="term" value="P:nucleotide-excision repair"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009432">
        <property type="term" value="P:SOS response"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.1440.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000305">
        <property type="entry name" value="GIY-YIG_endonuc"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR035901">
        <property type="entry name" value="GIY-YIG_endonuc_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001943">
        <property type="entry name" value="UVR_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036876">
        <property type="entry name" value="UVR_dom_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004791">
        <property type="entry name" value="UvrC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001162">
        <property type="entry name" value="UvrC_RNase_H_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01541">
        <property type="entry name" value="GIY-YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00465">
        <property type="entry name" value="GIYc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46600">
        <property type="entry name" value="SSF46600"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF82771">
        <property type="entry name" value="SSF82771"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00194">
        <property type="entry name" value="uvrC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50164">
        <property type="entry name" value="GIY_YIG"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50151">
        <property type="entry name" value="UVR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50165">
        <property type="entry name" value="UVRC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="2" id="KW-0227">DNA damage</keyword>
    <keyword evidence="3" id="KW-0228">DNA excision</keyword>
    <keyword evidence="5" id="KW-0234">DNA repair</keyword>
    <keyword evidence="4" id="KW-0267">Excision nuclease</keyword>
    <keyword evidence="12" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="6" id="KW-0742">SOS response</keyword>
    <feature type="domain" description="GIY-YIG" evidence="9">
        <location>
            <begin position="38"/>
            <end position="116"/>
        </location>
    </feature>
    <feature type="domain" description="UVR" evidence="8">
        <location>
            <begin position="225"/>
            <end position="260"/>
        </location>
    </feature>
    <feature type="domain" description="UVRC" evidence="10">
        <location>
            <begin position="276"/>
            <end position="367"/>
        </location>
    </feature>
    <feature type="region of interest" description="Disordered" evidence="7">
        <location>
            <begin position="1"/>
            <end position="23"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022490"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022763"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022769"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022881"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023204"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023236"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS50151"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="9">
        <source>
            <dbReference type="PROSITE" id="PS50164"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="10">
        <source>
            <dbReference type="PROSITE" id="PS50165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="EMBL" id="PJN95417.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="12">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="369" mass="40822" checksum="9F1CDF68315402A5" modified="2018-04-25" version="1">MSIQTPSGNPDFIEDGAAPGAARPGHEVIRDYLRRLPERPGVYRMLDAKGEVLYVGKARNLKKRVASYAKPGGHNARIARMIAATCSMMFLTTDTETESLLLEQNLIKQLKPRFNVLLRDDKSFPSILVTDHDFPRIEKHRGARKEKGRYFGPFAGAGAVTRTLSQLQRAFLLRSCSDAMYESRTRPCLLHQIRRCSAPCVGLIEAEDYAALVEDATLFLSGRSTRIQHELARQMGEASAAMEFERAGALRDRIRALTAVQSTQGVNPAGVEEADVVALHQEGGQACVQVFFIRAHQNWGNRAYFPRIGVGIEPGEILEAFLGQFYANKTPARLILLSHMPDNPDLLADALGESLGRNTARSRRAPGRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDA3</accession>
    <name>A0A2M9PDA3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Arylsulfatase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_08015</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="PTM">
        <text evidence="1">The conversion to 3-oxoalanine (also known as C-formylglycine, FGly), of a serine or cysteine residue in prokaryotes and of a cysteine residue in eukaryotes, is critical for catalytic activity.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000417">
        <property type="protein sequence ID" value="PJN95520.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008484">
        <property type="term" value="F:sulfuric ester hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.720.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR017850">
        <property type="entry name" value="Alkaline_phosphatase_core_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000917">
        <property type="entry name" value="Sulfatase_N"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00884">
        <property type="entry name" value="Sulfatase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53649">
        <property type="entry name" value="SSF53649"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="21"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014916018" evidence="2">
        <location>
            <begin position="22"/>
            <end position="521"/>
        </location>
    </feature>
    <feature type="domain" description="Sulfatase" evidence="3">
        <location>
            <begin position="30"/>
            <end position="358"/>
        </location>
    </feature>
    <feature type="modified residue" description="3-oxoalanine (Cys)" evidence="1">
        <location>
            <position position="79"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="PIRSR" id="PIRSR600917-51"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00884"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95520.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="521" mass="57913" checksum="78A5ECDC5B062BBE" modified="2018-04-25" version="1">MLKTLSLAATLALGASGYALAQDAPPPDKPNILVIFGDDIGQTNLSIYSQGLMGYRTPNIDRIGKEGGAFTDYYAEQSCTAGRSTFITGQVTLRTGMSKVGLPGADLGLQASDATMASALKELGYATGQFGKNHLGDKDEFLPTAHGFDEFFGNLYHLNAEEEPENFNYPQDPAFREQFGPRGVIRSKADGTIEDTGPLTRKRMETVDDETSAAAIDFINRQVDAKTPFFVWMNTTRMHARTHVRPENRDKPGLTARTEYADGMIETDAVIGTILDDLDAKGIADNTIVIYTTDNGPHQNTWPDAGTTPFRSEKNTNWEGAYRVPALIRWPGHIEPGTWYNGIFSGLDWFPTLLAAAGNPDITQQLLDGATIQGKEYKNHLDGFNQLDYLTGKSDKSARDSFFYFNDDNEIVGLRYENWKLAFAEQRETGHLAIWAEPFTKLRLPKMFDLRADPYERADITSNTYWDWVFDHAFLVVPAQAYVANFFGTFKDYPPAQRAASFSLDQIEESLMQQLNAASAQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-04-07" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDC8</accession>
    <name>A0A2M9PDC8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">Universal stress protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07875</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the universal stress protein A family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000409">
        <property type="protein sequence ID" value="PJN95539.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.620">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014729">
        <property type="entry name" value="Rossmann-like_a/b/a_fold"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006015">
        <property type="entry name" value="Universal_stress_UspA"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006016">
        <property type="entry name" value="UspA"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00582">
        <property type="entry name" value="Usp"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006276">
        <property type="entry name" value="UspA"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01438">
        <property type="entry name" value="UNVRSLSTRESS"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Usp" evidence="3">
        <location>
            <begin position="1"/>
            <end position="149"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008791"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="PIRNR" id="PIRNR006276"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF00582"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95539.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="149" mass="15804" checksum="4B573D3339EA0970" modified="2018-04-25" version="1">MYKKILIPTDGSPLAQQAVEKGVELAKALGASIVVLTVVEPFEVMRHFATSEYERLTETFATYQREAAAHAKGVLEGAAATAADAGVPAQTLQLESGYPFEAIVKAATEHAADLIVMSSHGRKGMAALMIGSETTKVLTHSKIPVLVLR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDG7</accession>
    <name>A0A2M9PDG7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="4">Electron transport protein SCO1/SenC</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_07585</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1">Belongs to the SCO1/2 family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000386">
        <property type="protein sequence ID" value="PJN95586.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd02968">
        <property type="entry name" value="SCO"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003782">
        <property type="entry name" value="SCO1/SenC"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036249">
        <property type="entry name" value="Thioredoxin-like_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013766">
        <property type="entry name" value="Thioredoxin_domain"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR12151">
        <property type="entry name" value="PTHR12151"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02630">
        <property type="entry name" value="SCO1-SenC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52833">
        <property type="entry name" value="SSF52833"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51352">
        <property type="entry name" value="THIOREDOXIN_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0186">Copper</keyword>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Thioredoxin" evidence="3">
        <location>
            <begin position="12"/>
            <end position="198"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010996"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023008"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="PROSITE" id="PS51352"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN95586.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="198" mass="22100" checksum="A237721DB2E4E298" modified="2018-04-25" version="1">MRRRTLIFSVASALGAAVGTLALGAWRSGRMAPEDPYRPLPLDRMNWQLTDHAGRSVAAADWLGRPTMVFFGFTWCPDVCPTTLSDISLWLEELGPEADQLLVALITVDPARDTPAALADYLSSFDPRIRGLTGSQSEIARAAEGFRVRYERVPQDGSYTMNHTAGVFLFDRGGRFVSVIDFHEDRRYALPKLRRILN</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDI6</accession>
    <name>A0A2M9PDI6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07510</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000381">
        <property type="protein sequence ID" value="PJN95599.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95599.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="67" mass="7171" checksum="5DE173111F320AC1" modified="2018-04-25" version="1" fragment="single">MPYSIATSGIVAQAFRLMELSPLSSLGDGGEQAAAAEEQYPVALEACLEACDWSFARRVARLQRVAP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDJ8</accession>
    <name>A0A2M9PDJ8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="1">3-dmu-9_3-mt domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07380</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000372">
        <property type="protein sequence ID" value="PJN95625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="CDD" id="cd06588">
        <property type="entry name" value="PhnB_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.10.180.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR009725">
        <property type="entry name" value="3_dmu_93_MTrfase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029068">
        <property type="entry name" value="Glyas_Bleomycin-R_OHBP_Dase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028973">
        <property type="entry name" value="PhnB-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06983">
        <property type="entry name" value="3-dmu-9_3-mt"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF021700">
        <property type="entry name" value="3_dmu_93_MTrfase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54593">
        <property type="entry name" value="SSF54593"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="3-dmu-9_3-mt" evidence="1">
        <location>
            <begin position="5"/>
            <end position="120"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="161"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF06983"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="161" mass="17883" checksum="EC70C6A2297A369A" modified="2018-04-25" version="1" fragment="single">MAIPKTTICIWYDKEAEAAARFYAETFPDSAVRAVHLAPGDYPSGKAGDVLTVEFTVAGLPCLGLNGGPAFRHTEAFSFQIATEDQEETDRYWNAIVGNGGQESACGWCKDRWGVSWQITPRALTEAMALLERHRRQRRPGKRLWLVQGPLGRLLADHPAR</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDK6</accession>
    <name>A0A2M9PDK6_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Pantoate--beta-alanine ligase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_07445</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000376">
        <property type="protein sequence ID" value="PJN95616.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016874">
        <property type="term" value="F:ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0436">Ligase</keyword>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <feature type="non-terminal residue" evidence="1">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN95616.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="43" mass="4740" checksum="CC7F09E3C0F0332F" modified="2018-04-25" version="1" fragment="single">RRRTSRPLDAADRPARLLAAAWLGEVRLIDNVEVRPMGAGQKG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PDP1</accession>
    <name>A0A2M9PDP1_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Transglutaminase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_07320</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000367">
        <property type="protein sequence ID" value="PJN95634.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038765">
        <property type="entry name" value="Papain-like_cys_pep_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002931">
        <property type="entry name" value="Transglutaminase-like"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01841">
        <property type="entry name" value="Transglut_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00460">
        <property type="entry name" value="TGc"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54001">
        <property type="entry name" value="SSF54001"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="TGc" evidence="1">
        <location>
            <begin position="116"/>
            <end position="181"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="SMART" id="SM00460"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95634.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="232" mass="24047" checksum="40CB19486ED47CA4" modified="2018-04-25" version="1" fragment="single">ATFGAGFIDGGGDEIRTMTIAGPVEKVEVLVEGTVDTTDTAGVLRGHRETIAPLVYLVSTSATRPSPALVELKDKALEGADPSNALGMAHRLSEAVAKAIAYGPGETTAQTTAAEALELGKGVCQDYAHALISVAHLAGLPARYAVGYLLSRDDGSPEDASHAWAEIHLPGLGWVGFDPTNDCCPDDRYVRLGAGRDAQDGAPIRGVSRGGAGEAIEVSVEVWDAAQKQSQQ</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE26</accession>
    <name>A0A2M9PE26_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">AsnC family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_06580</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000314">
        <property type="protein sequence ID" value="PJN95764.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0043565">
        <property type="term" value="F:sequence-specific DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="CDD" id="cd00090">
        <property type="entry name" value="HTH_ARSR"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011991">
        <property type="entry name" value="ArsR-like_HTH"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000485">
        <property type="entry name" value="AsnC-type_HTH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011008">
        <property type="entry name" value="Dimeric_a/b-barrel"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019888">
        <property type="entry name" value="Tscrpt_reg_AsnC-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019887">
        <property type="entry name" value="Tscrpt_reg_AsnC/Lrp_C"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR019885">
        <property type="entry name" value="Tscrpt_reg_HTH_AsnC-type_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036390">
        <property type="entry name" value="WH_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01037">
        <property type="entry name" value="AsnC_trans_reg"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR00033">
        <property type="entry name" value="HTHASNC"/>
    </dbReference>
    <dbReference type="SMART" id="SM00344">
        <property type="entry name" value="HTH_ASNC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF46785">
        <property type="entry name" value="SSF46785"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF54909">
        <property type="entry name" value="SSF54909"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00519">
        <property type="entry name" value="HTH_ASNC_1"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50956">
        <property type="entry name" value="HTH_ASNC_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0804">Transcription</keyword>
    <keyword evidence="1" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="HTH asnC-type" evidence="4">
        <location>
            <begin position="6"/>
            <end position="67"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00023015"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00023125"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00023163"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="PROSITE" id="PS50956"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN95764.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="163" mass="18200" checksum="EDC178CDBDAA3F82" modified="2018-04-25" version="1">MPAAKIDRIDLKILIELQKRGRVTNAELADAVGLSASPCLLRVKRLQKAGIITGYNAVVDLRKLGEAIHVFLEVTLTQHRSENFSIFENGLRRMPEVVEAHLISGGFDYLVRIVVRNLTHFQEVVEGMLDGGLGVAKYFSYIVVKSPLDSRVYPLKLLLDAEE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE45</accession>
    <name>A0A2M9PE45_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Ribose ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_06330</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000298">
        <property type="protein sequence ID" value="PJN95806.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0022857">
        <property type="term" value="F:transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="23"/>
            <end position="43"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="49"/>
            <end position="70"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="103"/>
            <end position="124"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="131"/>
            <end position="150"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="229"/>
            <end position="250"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="256"/>
            <end position="276"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="283"/>
            <end position="303"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="309"/>
            <end position="327"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN95806.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="334" mass="34447" checksum="D2E5E73A18DF3DFD" modified="2018-04-25" version="1">MTDANATVAPAPKRGGIAAQQMLWAFASLIVLLVFFSLASPNFLQTSNILAVLQATAVNGVLAIAVTMIIITGGIDLSIGTLMTFTAVTAGVVLTNWGLPLPVGIVVAIGMGAFCGLISGTLVTRMRIPPFIATLGMMLILKGLSLVVSGTKPIYFNDTPGYTQIAQGSLVGAVLPGVPVPNGVLILFIVAILQAWVLNRTLLGRYCFAMGSNEEAVRLSGVDTRAWKTAIYALGGAICGIAGLLISSRLNSAQPALGLGYELDAIAAVVIGGTSLAGGRGTILGTVIGALIMAVLLNGLRIMSVAQEWQTVVTGLIIIAAVYADMLRREKRAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PE81</accession>
    <name>A0A2M9PE81_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="9">Glycine--tRNA ligase alpha subunit</fullName>
            <ecNumber evidence="9">6.1.1.14</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="9">Glycyl-tRNA synthetase alpha subunit</fullName>
            <shortName evidence="9">GlyRS</shortName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="primary">glyQ</name>
        <name evidence="10" type="ORF">CNY89_06245</name>
    </gene>
    <organism evidence="10 11">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="10 11" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="10 11">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 9">
            <text>ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)</text>
            <dbReference type="Rhea" id="RHEA:16013"/>
            <dbReference type="Rhea" id="RHEA-COMP:9664"/>
            <dbReference type="Rhea" id="RHEA-COMP:9683"/>
            <dbReference type="ChEBI" id="CHEBI:30616"/>
            <dbReference type="ChEBI" id="CHEBI:33019"/>
            <dbReference type="ChEBI" id="CHEBI:57305"/>
            <dbReference type="ChEBI" id="CHEBI:78442"/>
            <dbReference type="ChEBI" id="CHEBI:78522"/>
            <dbReference type="ChEBI" id="CHEBI:456215"/>
            <dbReference type="EC" id="6.1.1.14"/>
        </reaction>
    </comment>
    <comment type="subunit">
        <text evidence="3 9">Tetramer of two alpha and two beta subunits.</text>
    </comment>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="9">Cytoplasm</location>
        </subcellularLocation>
    </comment>
    <comment type="similarity">
        <text evidence="2 9">Belongs to the class-II aminoacyl-tRNA synthetase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="10">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="6.1.1.14" evidence="9"/>
    <dbReference type="EMBL" id="PHNO01000293">
        <property type="protein sequence ID" value="PJN95822.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005737">
        <property type="term" value="C:cytoplasm"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005524">
        <property type="term" value="F:ATP binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0004820">
        <property type="term" value="F:glycine-tRNA ligase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006426">
        <property type="term" value="P:glycyl-tRNA aminoacylation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="CDD" id="cd00733">
        <property type="entry name" value="GlyRS_alpha_core"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.30.930.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00254">
        <property type="entry name" value="Gly_tRNA_synth_alpha"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR045864">
        <property type="entry name" value="aa-tRNA-synth_II/BPL/LPL"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006194">
        <property type="entry name" value="Gly-tRNA-synth_heterodimer"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002310">
        <property type="entry name" value="Gly-tRNA_ligase_asu"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02091">
        <property type="entry name" value="tRNA-synt_2e"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PRINTS" id="PR01044">
        <property type="entry name" value="TRNASYNTHGA"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF55681">
        <property type="entry name" value="SSF55681"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00388">
        <property type="entry name" value="glyQ"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50861">
        <property type="entry name" value="AA_TRNA_LIGASE_II_GLYAB"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="8 9" id="KW-0030">Aminoacyl-tRNA synthetase</keyword>
    <keyword evidence="6 9" id="KW-0067">ATP-binding</keyword>
    <keyword evidence="9" id="KW-0963">Cytoplasm</keyword>
    <keyword evidence="4 9 10" id="KW-0436">Ligase</keyword>
    <keyword evidence="5 9" id="KW-0547">Nucleotide-binding</keyword>
    <keyword evidence="7 9" id="KW-0648">Protein biosynthesis</keyword>
    <keyword evidence="11" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00000201"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00008226"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00011209"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022598"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00022741"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00022840"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00022917"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="ARBA" id="ARBA00023146"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="9">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00254"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="EMBL" id="PJN95822.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="11">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="313" mass="35099" checksum="FC32258C73EAC8BF" modified="2018-04-25" version="1">MTVTPPKSFQEILLRLQAYWAAQGCAILQPYDMEVGAGTFHPATTLRALGPRPWAAAYVQPSRRPTDGRYGENPNRLQHYYQYQVLMKPSPPDLQDLYLGSLRAIGIDMELHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCRPVSGELTYGLERLAMYVLGVDHVMDMPFNDPAAPIPLSYGDVFRQNEREYSRWNFEVADTDMLLRHFEDAEAECGRILGAEPADRAGRVIVMAGPAYDQCVKASHLFNLLDARGVISVTERQAYIGRVRALAKACADAWLETEAAVDPDASPKAYA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEC2</accession>
    <name>A0A2M9PEC2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Glycosyltransferase family 2 protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05860</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000270">
        <property type="protein sequence ID" value="PJN95889.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.90.550.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001173">
        <property type="entry name" value="Glyco_trans_2-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029044">
        <property type="entry name" value="Nucleotide-diphossugar_trans"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00535">
        <property type="entry name" value="Glycos_transf_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53448">
        <property type="entry name" value="SSF53448"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Glyco_trans_2-like" evidence="1">
        <location>
            <begin position="29"/>
            <end position="207"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF00535"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95889.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="348" mass="38041" checksum="8CD0FE6371C153A6" modified="2018-04-25" version="1">MSDPVPPPEVPVLAEPAAPPVAAPEPIVSIIVVSYNTREMTLECLSSLAAQTTIPYELIVVDNASSDGSAEAIAEAFPDVRLIASRENHGFAKANNIAALEARAPYLLLLNPDTVTLDHAIDRLVAFAERTPEAGIWGGRTLYGDGSLNAGSCNALQSLWSIFCRTTGLAVAFKGSAFFNPENYGSWDRSTEREVGYVCGCFFLIKRAFWNRLGGFDLTFVMYGEETDLCCRARALGARPRITPEATIIHYVGASTKRRSSKDVLVLKAQVTLAKRYLPGWQQGPAIFLLSLRPLVRKLGGDLLGLLGKTKAKEEARRWGEVWKTRASWKEGFPQLPHPARLEKGARP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-05-25" version="11" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEE2</accession>
    <name>A0A2M9PEE2_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="4">dTDP-4-dehydrorhamnose 3,5-epimerase</fullName>
            <ecNumber evidence="3">5.1.3.13</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Thymidine diphospho-4-keto-rhamnose 3,5-epimerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="5">dTDP-4-keto-6-deoxyglucose 3,5-epimerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="7">dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_05630</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="function">
        <text evidence="2">Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose.</text>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="1">
            <text>dTDP-4-dehydro-6-deoxy-alpha-D-glucose = dTDP-4-dehydro-beta-L-rhamnose</text>
            <dbReference type="Rhea" id="RHEA:16969"/>
            <dbReference type="ChEBI" id="CHEBI:57649"/>
            <dbReference type="ChEBI" id="CHEBI:62830"/>
            <dbReference type="EC" id="5.1.3.13"/>
        </reaction>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.1.3.13" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000257">
        <property type="protein sequence ID" value="PJN95920.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008830">
        <property type="term" value="F:dTDP-4-dehydrorhamnose 3,5-epimerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.60.120.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000888">
        <property type="entry name" value="dTDP_sugar_isom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014710">
        <property type="entry name" value="RmlC-like_jellyroll"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011051">
        <property type="entry name" value="RmlC_Cupin_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21047">
        <property type="entry name" value="PTHR21047"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00908">
        <property type="entry name" value="dTDP_sugar_isom"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51182">
        <property type="entry name" value="SSF51182"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <feature type="site" description="Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose" evidence="8">
        <location>
            <position position="29"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001298"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00001997"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00012098"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00019595"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00029758"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00031424"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="7">
        <source>
            <dbReference type="ARBA" id="ARBA00033311"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="8">
        <source>
            <dbReference type="PIRSR" id="PIRSR600888-3"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN95920.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="80" mass="8810" checksum="49BCFE0DAAEA8B39" modified="2018-04-25" version="1" fragment="single">QLLVPAGFGHGYLTLEPGTEVIYKVTQPYAPANDHGFLWSDPDLAIDWGFDPEALVLSDKDRVLPRLAEIDSPFVWEGAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEJ3</accession>
    <name>A0A2M9PEJ3_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_05340</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000242">
        <property type="protein sequence ID" value="PJN95970.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005509">
        <property type="term" value="F:calcium ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="2.150.10.10">
        <property type="match status" value="3"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR018511">
        <property type="entry name" value="Hemolysin-typ_Ca-bd_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001343">
        <property type="entry name" value="Hemolysn_Ca-bd"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011049">
        <property type="entry name" value="Serralysin-like_metalloprot_C"/>
    </dbReference>
    <dbReference type="Pfam" id="PF00353">
        <property type="entry name" value="HemolysinCabind"/>
        <property type="match status" value="5"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51120">
        <property type="entry name" value="SSF51120"/>
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS00330">
        <property type="entry name" value="HEMOLYSIN_CALCIUM"/>
        <property type="match status" value="3"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="region of interest" description="Disordered" evidence="1">
        <location>
            <begin position="175"/>
            <end position="226"/>
        </location>
    </feature>
    <feature type="compositionally biased region" description="Basic and acidic residues" evidence="1">
        <location>
            <begin position="175"/>
            <end position="213"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="MobiDB-lite"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN95970.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="340" mass="35498" checksum="FAF5671A057C7AD3" modified="2018-04-25" version="1">MADAPQEVTPLYGTAGNDILFATYGNWANVVDALEGDDTIVRDRTGAYWLEGNSFADAYVYGGSGADTVSYTNANHAVSVNLAQGLAQLDAVLTGGVTYGTDFLDGIERVIGTTFDDHIIGSAGVNRLWGHDGDDDIWGEAGNDELWGMQGDDLIYGGTGADKLYGDDGEDDLRGGDHADLLRGGDDDDDLRGDDGNDTLHGDDGDDTLRGGDDNDTLYGGDGDDTLYGDAGNDHLHVGAGDDVAYGGSGDDRFYVSGAGDNDFYGNSGADWVQYSGASPVLVNLWGDTALRTNGSDSFDSVENVQTGTGADTVFGTKQPAEDHESGVQVLHPCFAAVQG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="12" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET4</accession>
    <name>A0A2M9PET4_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">RNA polymerase sigma factor</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_04760</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="similarity">
        <text evidence="1 2">Belongs to the sigma-70 factor family. ECF subfamily.</text>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000207">
        <property type="protein sequence ID" value="PJN96070.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016987">
        <property type="term" value="F:sigma factor activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006352">
        <property type="term" value="P:DNA-templated transcription, initiation"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006950">
        <property type="term" value="P:response to stress"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.10.10">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR039425">
        <property type="entry name" value="RNA_pol_sigma-70-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR014284">
        <property type="entry name" value="RNA_pol_sigma-70_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000838">
        <property type="entry name" value="RNA_pol_sigma70_ECF_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007627">
        <property type="entry name" value="RNA_pol_sigma70_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013249">
        <property type="entry name" value="RNA_pol_sigma70_r4_t2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013325">
        <property type="entry name" value="RNA_pol_sigma_r2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013324">
        <property type="entry name" value="RNA_pol_sigma_r3/r4-like"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR036388">
        <property type="entry name" value="WH-like_DNA-bd_sf"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR43133">
        <property type="entry name" value="PTHR43133"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04542">
        <property type="entry name" value="Sigma70_r2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF08281">
        <property type="entry name" value="Sigma70_r4_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88659">
        <property type="entry name" value="SSF88659"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF88946">
        <property type="entry name" value="SSF88946"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR02937">
        <property type="entry name" value="sigma70-ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01063">
        <property type="entry name" value="SIGMA70_ECF"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0731">Sigma factor</keyword>
    <keyword evidence="2" id="KW-0804">Transcription</keyword>
    <keyword evidence="2" id="KW-0805">Transcription regulation</keyword>
    <feature type="domain" description="Sigma70_r2" evidence="3">
        <location>
            <begin position="16"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="domain" description="Sigma70_r4_2" evidence="4">
        <location>
            <begin position="105"/>
            <end position="156"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00010641"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="RuleBase" id="RU000716"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="3">
        <source>
            <dbReference type="Pfam" id="PF04542"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF08281"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96070.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="184" mass="19833" checksum="4485BA9EB0A178CD" modified="2018-04-25" version="1">MSEAPPSFKSALLAALPSLRAFAMSLTGRHDQADDLVQETVMKAWAKQEAFTLGTNMNAWLFTILRNLFYSQMRKRGREVQDVEGAFSSKVGVAPSHDGRMDLADFRRALDQLPPDQREAILLIGAAGFSYEEAASICGCAVGTVKSRVSRARTRLQAMLGVSGASDYGPDAASSPVVSRAFAT</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="6" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PET5</accession>
    <name>A0A2M9PET5_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04960</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000218">
        <property type="protein sequence ID" value="PJN96036.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96036.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="116" mass="12203" checksum="34B51EE2AE38F770" modified="2018-04-25" version="1">MQTKALRQAGRRLIVLAPRVGSVGIVANVALDDPSHAPSCAVDPEASNSIGDAPASARTARWSMDGAATQVIGRIRGLPTSRFLLSCAAAIRVRLALARISKARVTNPSCQNLRFV</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEU6</accession>
    <name>A0A2M9PEU6_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="6">RDD domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_04865</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000213">
        <property type="protein sequence ID" value="PJN96048.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010432">
        <property type="entry name" value="RDD"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06271">
        <property type="entry name" value="RDD"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="4 5" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 5" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3 5" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="22"/>
            <end position="46"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="52"/>
            <end position="78"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="5">
        <location>
            <begin position="99"/>
            <end position="125"/>
        </location>
    </feature>
    <feature type="domain" description="RDD" evidence="6">
        <location>
            <begin position="18"/>
            <end position="137"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="6">
        <source>
            <dbReference type="Pfam" id="PF06271"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96048.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="148" mass="15914" checksum="F1920FB475318DE3" modified="2018-04-25" version="1">MSGLPDPDRDQRFYAGVPSRRLAAWVVDVIVALGIGVPLALVFGLMTLGFGLALFPMILLGVGFLYRVATIASGSATWGMRLMGIELRRQDGTRFDLTAAFLHTALYTVCIGVMILQVASIVGMLGTRYGQGLPDLVLRSAMINRPAD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEX4</accession>
    <name>A0A2M9PEX4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="1">Sulfotransferase family protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="1" type="ORF">CNY89_04795</name>
    </gene>
    <organism evidence="1 2">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="1 2" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="1 2">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="1">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000209">
        <property type="protein sequence ID" value="PJN96062.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.300">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027417">
        <property type="entry name" value="P-loop_NTPase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR040632">
        <property type="entry name" value="Sulfotransfer_4"/>
    </dbReference>
    <dbReference type="Pfam" id="PF17784">
        <property type="entry name" value="Sulfotransfer_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF52540">
        <property type="entry name" value="SSF52540"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="1" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000313" key="1">
        <source>
            <dbReference type="EMBL" id="PJN96062.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="208" mass="22931" checksum="579E62866CD9D872" modified="2018-04-25" version="1">MSLQVVGAGFGRTGTHSLREALGVLGLGPCYHMVEVIQDPERKVPQWVAASEGKPDWDAIFEGYVSTVDWPSAAYWKSIHAHFPEAKVILSSRSAESWYDSFSETIAWLMATPETLPPHLGPWLKMGSDLIANTTFGGRPTDRAHAIAVFNAYEAEVKASVPADRLLVFRAADGWDPLCRFLGKPVPDVPYPRTNTKDDFVARFKQGA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-01-19" version="15" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PEY8</accession>
    <name>A0A2M9PEY8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="2">M20_dimer domain-containing protein</fullName>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_04460</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000192">
        <property type="protein sequence ID" value="PJN96115.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002933">
        <property type="entry name" value="Peptidase_M20"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR011650">
        <property type="entry name" value="Peptidase_M20_dimer"/>
    </dbReference>
    <dbReference type="Pfam" id="PF07687">
        <property type="entry name" value="M20_dimer"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01546">
        <property type="entry name" value="Peptidase_M20"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="M20_dimer" evidence="2">
        <location>
            <begin position="20"/>
            <end position="103"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00022801"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="2">
        <source>
            <dbReference type="Pfam" id="PF07687"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96115.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="205" mass="22237" checksum="E6692444A638007D" modified="2018-04-25" version="1">MPELPQALRESWDKLDFSEADFLGRIGLSIPAGEKDRSVLEQIWARPTAEVNGMGGGYQGAGFKTVIPSRASAKVSFRLVFDQEPEKIRAAFRDFVRARVPADCKVAFEEHGGAPAVAFDPTGPAFKAAGEALTAEWGRETAYVGGGGSIPVNTEFKDKLGLEVVLVGFALGDDRIHSPNEKYDLTSFHKGIRSWARILEALSRG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="16" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFD2</accession>
    <name>A0A2M9PFD2_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="9">tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="9" type="ORF">CNY89_03620</name>
    </gene>
    <organism evidence="9 10">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="9 10" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="9 10">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="cofactor">
        <cofactor evidence="1">
            <name>[4Fe-4S] cluster</name>
            <dbReference type="ChEBI" id="CHEBI:49883"/>
        </cofactor>
    </comment>
    <comment type="caution">
        <text evidence="9">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000150">
        <property type="protein sequence ID" value="PJN96260.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0051539">
        <property type="term" value="F:4 iron, 4 sulfur cluster binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0046872">
        <property type="term" value="F:metal ion binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016740">
        <property type="term" value="F:transferase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006400">
        <property type="term" value="P:tRNA modification"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.80.30.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR006638">
        <property type="entry name" value="Elp3/MiaB/NifB"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR005839">
        <property type="entry name" value="Methylthiotransferase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR020612">
        <property type="entry name" value="Methylthiotransferase_CS"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR007197">
        <property type="entry name" value="rSAM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR023404">
        <property type="entry name" value="rSAM_horseshoe"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002792">
        <property type="entry name" value="TRAM_dom"/>
    </dbReference>
    <dbReference type="Pfam" id="PF04055">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01938">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDG01061">
        <property type="entry name" value="methylthiotransferase"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SFLD" id="SFLDS00029">
        <property type="entry name" value="Radical_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SMART" id="SM00729">
        <property type="entry name" value="Elp3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR00089">
        <property type="entry name" value="TIGR00089"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS01278">
        <property type="entry name" value="MTTASE_RADICAL"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS51918">
        <property type="entry name" value="RADICAL_SAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PROSITE" id="PS50926">
        <property type="entry name" value="TRAM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0004">4Fe-4S</keyword>
    <keyword evidence="5" id="KW-0408">Iron</keyword>
    <keyword evidence="6" id="KW-0411">Iron-sulfur</keyword>
    <keyword evidence="4" id="KW-0479">Metal-binding</keyword>
    <keyword evidence="10" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0949">S-adenosyl-L-methionine</keyword>
    <keyword evidence="9" id="KW-0808">Transferase</keyword>
    <feature type="domain" description="Radical SAM core" evidence="8">
        <location>
            <begin position="4"/>
            <end position="234"/>
        </location>
    </feature>
    <feature type="domain" description="TRAM" evidence="7">
        <location>
            <begin position="234"/>
            <end position="295"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="9">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001966"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022485"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022691"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022723"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023004"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="ARBA" id="ARBA00023014"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="7">
        <source>
            <dbReference type="PROSITE" id="PS50926"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="8">
        <source>
            <dbReference type="PROSITE" id="PS51918"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="9">
        <source>
            <dbReference type="EMBL" id="PJN96260.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="10">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="295" mass="31885" checksum="CA9951E1EE582B9D" modified="2018-04-25" version="1" fragment="single">DRRARRAPAAFLTVQEGCDKFCAFCVVPYTRGAEVSRPSARILAEARALVERGVAEITLLGQNVNAYRDADGQTLAGLVRRLAEIPGLLRLRYTTSHPNDMADDLIAAHAEVPALMPYLHLPVQSGSDRILKAMNRRHTAAHYLGLVERIRAARPDIALSGDFIVGFPGETEADFQDTLALVEAVGYAAAYTFAYSPRPGTPAADRADLAPEVKTDRLLRLQALIDRQQSAFQASMVGRTLPILVEKLGREPGQVAGKSPYLNAVHLDGGPELIGRVVTAKITAARRNSLSARAA</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFH4</accession>
    <name>A0A2M9PFH4_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">LacI family transcriptional regulator</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_03455</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000140">
        <property type="protein sequence ID" value="PJN96291.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006355">
        <property type="term" value="P:regulation of transcription, DNA-templated"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProt"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR046335">
        <property type="entry name" value="LacI/GalR-like_sensor"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR028082">
        <property type="entry name" value="Peripla_BP_I"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13377">
        <property type="entry name" value="Peripla_BP_3"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53822">
        <property type="entry name" value="SSF53822"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="Peripla_BP_3" evidence="1">
        <location>
            <begin position="128"/>
            <end position="288"/>
        </location>
    </feature>
    <feature type="non-terminal residue" evidence="2">
        <location>
            <position position="1"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13377"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96291.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="294" mass="31096" checksum="E011BD3B128ECAA2" modified="2018-04-25" version="1" fragment="single">RRQGYRRDALAASLRTGRSRLVGVLVPDLANPVFAPILNGISARLSREGYSMLIAGVGASETDQARIVEELIARRVDGLLLATARRNDVVLTACLEACVPTVLVNRREDAMRVSSIVSDDIRGQTLAVEHLVGLGHRAIGHLAGPGDVSTGLLRFEGFQAAMRAAGLDPSCVAQASSYSRAAGEAATAALLDRWPEITAIAASNDLLALGAILELRRRGLACPEQVSIVGYNDMPMLDMVDPPLTTVNIGHEDMGDQAASALIAEIAAGERHTAATLVPTRLVLRGSTSRPPRD</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-12-02" version="10" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFN9</accession>
    <name>A0A2M9PFN9_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="5">ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="5" type="ORF">CNY89_02975</name>
    </gene>
    <organism evidence="5 6">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="5 6" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="5 6">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="2">Cell inner membrane</location>
            <topology evidence="2">Multi-pass membrane protein</topology>
        </subcellularLocation>
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="5">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000117">
        <property type="protein sequence ID" value="PJN96363.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-SubCell"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR010656">
        <property type="entry name" value="DctM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR004681">
        <property type="entry name" value="TRAP_DctM"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR33362">
        <property type="entry name" value="PTHR33362"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF06808">
        <property type="entry name" value="DctM"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="PIRSF" id="PIRSF006066">
        <property type="entry name" value="HI0050"/>
        <property type="match status" value="2"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="3" id="KW-0472">Membrane</keyword>
    <keyword evidence="6" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="3" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="100"/>
            <end position="119"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="131"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="168"/>
            <end position="191"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="212"/>
            <end position="245"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="280"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="316"/>
            <end position="334"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="355"/>
            <end position="384"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="396"/>
            <end position="421"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="3">
        <location>
            <begin position="433"/>
            <end position="460"/>
        </location>
    </feature>
    <feature type="domain" description="DctM" evidence="4">
        <location>
            <begin position="5"/>
            <end position="455"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004429"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000259" key="4">
        <source>
            <dbReference type="Pfam" id="PF06808"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="EMBL" id="PJN96363.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="6">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="469" mass="49746" checksum="13B07C8C5DD783C6" modified="2018-04-25" version="1">MALLIGSFLLLMLIGVPVALAMFSASALYLLAYGVAPDIIIAQRMIAGVESFPLLAVPFFILAGNLMNIAGVTGRIYAFAVSLVGWMKGGLAQVNIIGSVIFSGMSGTALADAAGIGTIEIKAMKDHGYPVEAAVGVTAASATLGPIFPPSLPFVIYGMMANVSIGALFMAGILPGLVMTILMMATVAIFAARKGWGSDAPFDIRKLAEASLEVLIVFCFPLLVYLLILVGLSVNLAVLVALALLVALDWYFDWSAVMALMTPVILIGGMTMGWFTPTEAAVAAVMWSLFLGLVRYRTMTLRTLAKASFDTIETTASVLFIVTAASVFAWLLTVSQAAQLASDAILGLTDNKWAFLLLVNVLVLIIGCFLDTIAAITIIVPIMLPIATRLGVDPVHFGLILTLNLMIGLLTPPLGVVLFVLSRISRLSIERTTMAILPWMAPLFIALIVITFIPAVTLWLPTQLGLIRP</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PFW7</accession>
    <name>A0A2M9PFW7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="3">Uncharacterized protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="3" type="ORF">CNY89_02525</name>
    </gene>
    <organism evidence="3 4">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="3 4" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="3 4">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="3">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000097">
        <property type="protein sequence ID" value="PJN96441.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="1" id="KW-0472">Membrane</keyword>
    <keyword evidence="4" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2" id="KW-0732">Signal</keyword>
    <keyword evidence="1" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="1" id="KW-1133">Transmembrane helix</keyword>
    <feature type="signal peptide" evidence="2">
        <location>
            <begin position="1"/>
            <end position="19"/>
        </location>
    </feature>
    <feature type="chain" id="PRO_5014676968" evidence="2">
        <location>
            <begin position="20"/>
            <end position="66"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="1">
        <location>
            <begin position="43"/>
            <end position="61"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="SAM" id="SignalP"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="EMBL" id="PJN96441.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="66" mass="6631" checksum="A664B77C8D42AFC2" modified="2018-04-25" version="1">MKFIVSTAAALLLAGQAFAGALVFEAPVEEEIVVAEPAPAGGFNAAWLIPVIGLAAVAYAISNDDS</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-04-22" version="7" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PG14</accession>
    <name>A0A2M9PG14_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">Alpha/beta hydrolase</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_02210</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000082">
        <property type="protein sequence ID" value="PJN96491.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016787">
        <property type="term" value="F:hydrolase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.40.50.1820">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR029058">
        <property type="entry name" value="AB_hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR000073">
        <property type="entry name" value="AB_hydrolase_1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF12697">
        <property type="entry name" value="Abhydrolase_6"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF53474">
        <property type="entry name" value="SSF53474"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0378">Hydrolase</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="AB hydrolase-1" evidence="1">
        <location>
            <begin position="25"/>
            <end position="235"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF12697"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96491.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="248" mass="26637" checksum="702800266E49428D" modified="2018-04-25" version="1">MSETLDLGGGRRIAYRRSAGAGPGVVFLGGFRSDMTGTKAEFLHDWAAARGRAFLRFDYTGHGASSGDFEAGCIGDWAADATAVLDRLTEGPQILVGSSMGGWIALLLAKRRPERVAGIVGIAAAPDFTEDSMWAGFGEAERAALVRDGHVDLPSDYSDDPYRITRRLIEDGRENLVLRAPLALACPVRLLHGTADRDVAMSVPLRLLEHATGPDIRLTLVNDVDHRFNRPEELAMIVAAVEELLGAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-10-07" version="8" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGE7</accession>
    <name>A0A2M9PGE7_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="2">DNA-binding protein</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="2" type="ORF">CNY89_01430</name>
    </gene>
    <organism evidence="2 3">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="2 3" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="2 3">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="caution">
        <text evidence="2">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000050">
        <property type="protein sequence ID" value="PJN96625.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003677">
        <property type="term" value="F:DNA binding"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="Gene3D" id="1.10.3990.20">
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR027373">
        <property type="entry name" value="RHH_dom"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR038268">
        <property type="entry name" value="RHH_sf"/>
    </dbReference>
    <dbReference type="Pfam" id="PF13467">
        <property type="entry name" value="RHH_4"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-0238">DNA-binding</keyword>
    <keyword evidence="3" id="KW-1185">Reference proteome</keyword>
    <feature type="domain" description="RHH_4" evidence="1">
        <location>
            <begin position="16"/>
            <end position="82"/>
        </location>
    </feature>
    <evidence type="ECO:0000259" key="1">
        <source>
            <dbReference type="Pfam" id="PF13467"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="2">
        <source>
            <dbReference type="EMBL" id="PJN96625.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="3">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="94" mass="10447" checksum="E3BE28CAE87FBCAE" modified="2018-04-25" version="1">MCRMYAGQDPARYQPETRHLRLNGQSTSIRLEAAFWGILDGIAAGEGLSTAAFISRLHDEVLLLQGEARNFTSILRCTCLVHLERRAPMAMAAE</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2022-08-03" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGK8</accession>
    <name>A0A2M9PGK8_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="3">Phospho-2-dehydro-3-deoxyheptonate aldolase</fullName>
            <ecNumber evidence="3">2.5.1.54</ecNumber>
        </recommendedName>
    </protein>
    <gene>
        <name evidence="4" type="ORF">CNY89_01040</name>
    </gene>
    <organism evidence="4 5">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="4 5" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="4 5">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="3">
            <text>D-erythrose 4-phosphate + H2O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate</text>
            <dbReference type="Rhea" id="RHEA:14717"/>
            <dbReference type="ChEBI" id="CHEBI:15377"/>
            <dbReference type="ChEBI" id="CHEBI:16897"/>
            <dbReference type="ChEBI" id="CHEBI:43474"/>
            <dbReference type="ChEBI" id="CHEBI:58394"/>
            <dbReference type="ChEBI" id="CHEBI:58702"/>
            <dbReference type="EC" id="2.5.1.54"/>
        </reaction>
    </comment>
    <comment type="similarity">
        <text evidence="1 3">Belongs to the class-II DAHP synthase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="4">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="2.5.1.54" evidence="3"/>
    <dbReference type="EMBL" id="PHNO01000036">
        <property type="protein sequence ID" value="PJN96687.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0003849">
        <property type="term" value="F:3-deoxy-7-phosphoheptulonate synthase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-EC"/>
    </dbReference>
    <dbReference type="GO" id="GO:0009073">
        <property type="term" value="P:aromatic amino acid family biosynthetic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="Gene3D" id="3.20.20.70">
        <property type="match status" value="2"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR013785">
        <property type="entry name" value="Aldolase_TIM"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR002480">
        <property type="entry name" value="DAHP_synth_2"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR21337">
        <property type="entry name" value="PTHR21337"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF01474">
        <property type="entry name" value="DAHP_synth_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="TIGRFAMs" id="TIGR01358">
        <property type="entry name" value="DAHP_synth_II"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="5" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="2 3" id="KW-0808">Transferase</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00008911"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022679"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="RuleBase" id="RU363071"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="4">
        <source>
            <dbReference type="EMBL" id="PJN96687.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="5">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="457" mass="50258" checksum="6BE25AAE567422E3" modified="2018-04-25" version="1">MGVEWTKSDWRAKPRVQMPDYPDVAALKATEARLASYPPLVFAGEARDLRRVLAEAAAGRAFLLQGGDCAESFSEFSADNIRDTFKVLLQMAVVLTFGAKCPVVKVGRVAGQFAKPRSAPMEAIGGVELPSYRGDIINDFDFTPEARVPDPARMLQAYTQAAASLNLLRAFSQGGYADINRVHSWTLDSTSGQPGYEQYQKLANRISDALDFMRAAGVDAGNADTLHRVDFYTSHEALLLEYEEALCRIDSTTGVPVAGSGHMLWIGDRTRQPDGAHVEFLRGVQNPIGLKCGPSLTESDLLTLIDRLNPKNEAGRLTLITRFGAGSVGEHLPRLIRAVEREGRQVLWCCDPMHGNTIKSESGYKTRPFDRVLREVREFFAVHAAEGTIPGGVHFEMTGKDVTECTGGVRAVRDEDLSDRYHTACDPRLNASQSLELAFLVSQELDQRRQQSRRAAG</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2021-09-29" version="13" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PGX9</accession>
    <name>A0A2M9PGX9_9RHOB</name>
    <protein>
        <recommendedName>
            <fullName evidence="5 6">Uronate isomerase</fullName>
            <ecNumber evidence="4 6">5.3.1.12</ecNumber>
        </recommendedName>
        <alternativeName>
            <fullName evidence="6">Glucuronate isomerase</fullName>
        </alternativeName>
        <alternativeName>
            <fullName evidence="6">Uronic isomerase</fullName>
        </alternativeName>
    </protein>
    <gene>
        <name evidence="6" type="primary">uxaC</name>
        <name evidence="7" type="ORF">CNY89_00425</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="catalytic activity">
        <reaction evidence="1 6">
            <text>D-glucuronate = D-fructuronate</text>
            <dbReference type="Rhea" id="RHEA:13049"/>
            <dbReference type="ChEBI" id="CHEBI:58720"/>
            <dbReference type="ChEBI" id="CHEBI:59863"/>
            <dbReference type="EC" id="5.3.1.12"/>
        </reaction>
    </comment>
    <comment type="catalytic activity">
        <reaction evidence="6">
            <text>aldehydo-D-galacturonate = keto-D-tagaturonate</text>
            <dbReference type="Rhea" id="RHEA:27702"/>
            <dbReference type="ChEBI" id="CHEBI:12952"/>
            <dbReference type="ChEBI" id="CHEBI:17886"/>
        </reaction>
    </comment>
    <comment type="pathway">
        <text evidence="2 6">Carbohydrate metabolism; pentose and glucuronate interconversion.</text>
    </comment>
    <comment type="similarity">
        <text evidence="3 6">Belongs to the metallo-dependent hydrolases superfamily. Uronate isomerase family.</text>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EC" id="5.3.1.12" evidence="4 6"/>
    <dbReference type="EMBL" id="PHNO01000012">
        <property type="protein sequence ID" value="PJN96805.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="UniPathway" id="UPA00246"/>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0008880">
        <property type="term" value="F:glucuronate isomerase activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-UniRule"/>
    </dbReference>
    <dbReference type="GO" id="GO:0006064">
        <property type="term" value="P:glucuronate catabolic process"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="HAMAP" id="MF_00675">
        <property type="entry name" value="UxaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR032466">
        <property type="entry name" value="Metal_Hydrolase"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR003766">
        <property type="entry name" value="Uronate_isomerase"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02614">
        <property type="entry name" value="UxaC"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="SUPFAM" id="SSF51556">
        <property type="entry name" value="SSF51556"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="inferred from homology"/>
    <keyword evidence="6 7" id="KW-0413">Isomerase</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00001165"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00004892"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00008397"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00012546"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00020555"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="HAMAP-Rule" id="MF_00675"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96805.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="467" mass="52678" checksum="33F2080096592D9E" modified="2018-04-25" version="1">MALDPDRLFPIEPGARALARALYDEVRDLPIVSPHGHTDPRWYAEDAAFPDPAQLFVTPDHYVFRMLHSQGVPLTDLGVPRVDGGQTETDGRTIWRRLAEHFHLLRGTPSRMWLEHTFETVFGLDGRLSPATADAFYDHIAERLARPEYRPRALFDRFGIEVIATTESALDDLRWHRQVRESDWSGRVVTAYRPDAVVDPDFPGFALNVARLGELTGCDTATWEGYLEAHRQRREFFKDHGATSSDHGHPTARTENLPQAEAAALFARVLTGQATPEEADAFRGQMLTEMARMSLEDGLVLQIHPGSMRNHSPEVMARFGRDKGFDIPTRTDYVRALKPLLDEVGERADLTIILFTLDESVYARELAPLAGVYPALKLGPAWWFHDSPEGMRRYREMTTETAGFYNTVGFNDDTRAFCSIPARHDMARRVDCAFLATLVATGRLAEDEAPEVARDLAYRLAKTAYKL</sequence>
</entry>
<entry dataset="TrEMBL" created="2018-04-25" modified="2020-08-12" version="9" xmlns="http://uniprot.org/uniprot">
    <accession>A0A2M9PH11</accession>
    <name>A0A2M9PH11_9RHOB</name>
    <protein>
        <submittedName>
            <fullName evidence="7">Branched-chain amino acid ABC transporter permease</fullName>
        </submittedName>
    </protein>
    <gene>
        <name evidence="7" type="ORF">CNY89_00235</name>
    </gene>
    <organism evidence="7 8">
        <name type="scientific">Amaricoccus sp. HAR-UPW-R2A-40</name>
        <dbReference type="NCBI Taxonomy" id="1985299"/>
        <lineage>
            <taxon>Bacteria</taxon>
            <taxon>Proteobacteria</taxon>
            <taxon>Alphaproteobacteria</taxon>
            <taxon>Rhodobacterales</taxon>
            <taxon>Rhodobacteraceae</taxon>
            <taxon>Amaricoccus</taxon>
            <taxon>unclassified Amaricoccus</taxon>
        </lineage>
    </organism>
    <reference evidence="7 8" key="1">
        <citation type="submission" date="2017-11" db="EMBL/GenBank/DDBJ databases">
            <title>HAR-UPW-R2A-40 Amaricoccus sp.</title>
            <authorList>
                <person name="Kumari P."/>
                <person name="Krishnamurthi S."/>
            </authorList>
        </citation>
        <scope>NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]</scope>
        <source>
            <strain evidence="7 8">HAR-UPW-R2A-40</strain>
        </source>
    </reference>
    <comment type="subcellular location">
        <subcellularLocation>
            <location evidence="1">Membrane</location>
            <topology evidence="1">Multi-pass membrane protein</topology>
        </subcellularLocation>
    </comment>
    <comment type="caution">
        <text evidence="7">The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.</text>
    </comment>
    <dbReference type="EMBL" id="PHNO01000006">
        <property type="protein sequence ID" value="PJN96839.1"/>
        <property type="molecule type" value="Genomic_DNA"/>
    </dbReference>
    <dbReference type="Proteomes" id="UP000232137">
        <property type="component" value="Unassembled WGS sequence"/>
    </dbReference>
    <dbReference type="GO" id="GO:0016021">
        <property type="term" value="C:integral component of membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0005886">
        <property type="term" value="C:plasma membrane"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="UniProtKB-KW"/>
    </dbReference>
    <dbReference type="GO" id="GO:0015658">
        <property type="term" value="F:branched-chain amino acid transmembrane transporter activity"/>
        <property type="evidence" value="ECO:0007669"/>
        <property type="project" value="InterPro"/>
    </dbReference>
    <dbReference type="CDD" id="cd06581">
        <property type="entry name" value="TM_PBP1_LivM_like"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR001851">
        <property type="entry name" value="ABC_transp_permease"/>
    </dbReference>
    <dbReference type="InterPro" id="IPR043428">
        <property type="entry name" value="LivM-like"/>
    </dbReference>
    <dbReference type="PANTHER" id="PTHR30482">
        <property type="entry name" value="PTHR30482"/>
        <property type="match status" value="1"/>
    </dbReference>
    <dbReference type="Pfam" id="PF02653">
        <property type="entry name" value="BPD_transp_2"/>
        <property type="match status" value="1"/>
    </dbReference>
    <proteinExistence type="predicted"/>
    <keyword evidence="2" id="KW-1003">Cell membrane</keyword>
    <keyword evidence="5 6" id="KW-0472">Membrane</keyword>
    <keyword evidence="8" id="KW-1185">Reference proteome</keyword>
    <keyword evidence="3 6" id="KW-0812">Transmembrane</keyword>
    <keyword evidence="4 6" id="KW-1133">Transmembrane helix</keyword>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="28"/>
            <end position="45"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="51"/>
            <end position="69"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="76"/>
            <end position="95"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="101"/>
            <end position="123"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="130"/>
            <end position="148"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="183"/>
            <end position="200"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="237"/>
            <end position="259"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="271"/>
            <end position="296"/>
        </location>
    </feature>
    <feature type="transmembrane region" description="Helical" evidence="6">
        <location>
            <begin position="316"/>
            <end position="335"/>
        </location>
    </feature>
    <evidence type="ECO:0000256" key="1">
        <source>
            <dbReference type="ARBA" id="ARBA00004141"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="2">
        <source>
            <dbReference type="ARBA" id="ARBA00022475"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="3">
        <source>
            <dbReference type="ARBA" id="ARBA00022692"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="4">
        <source>
            <dbReference type="ARBA" id="ARBA00022989"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="5">
        <source>
            <dbReference type="ARBA" id="ARBA00023136"/>
        </source>
    </evidence>
    <evidence type="ECO:0000256" key="6">
        <source>
            <dbReference type="SAM" id="Phobius"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="7">
        <source>
            <dbReference type="EMBL" id="PJN96839.1"/>
        </source>
    </evidence>
    <evidence type="ECO:0000313" key="8">
        <source>
            <dbReference type="Proteomes" id="UP000232137"/>
        </source>
    </evidence>
    <sequence length="358" mass="38409" checksum="F7B9A02FED77FDA7" modified="2018-04-25" version="1">MIYREAGDFKTTYAADAQAFPIRMDRRAYYALLATAFLVVPFVVTGYWSNAILLPFLIWSIAALGLNILTGYCGQLSLGTGGFMAVGAFAAFKLMTAFPGLNILFVVLAAGLITAAVGMLFGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFMNHSATGQITAPVRSLFGVAVTGAAATPAAKYLFCLAILTGLALLAKNLTRGRIGRSWMAIRDMDIAAEIIGVNPLAAKLSAFAVSSFFVGVAGALYFTVYMGAVEVTDAFGIRVSFLVLFMIIIGGLGSILGAFLGAGFMVLLPILLKTLMVGGLGWPSDLAAHVEIMTLGLLIMVVLIYEPHGLAQLWRLAKEKLRLWPFPH</sequence>
</entry>
<copyright>
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms Distributed under the Creative Commons Attribution (CC BY 4.0) License
</copyright>
</uniprot>